BLASTX nr result
ID: Cornus23_contig00012287
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00012287
(267 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011651991.1| PREDICTED: polyadenylation and cleavage fact... 76 1e-11
ref|XP_011651992.1| PREDICTED: polyadenylation and cleavage fact... 76 1e-11
ref|XP_008442799.1| PREDICTED: cell wall protein AWA1-like isofo... 76 1e-11
ref|XP_008442798.1| PREDICTED: cell wall protein AWA1-like isofo... 76 1e-11
ref|XP_010654041.1| PREDICTED: polyadenylation and cleavage fact... 72 2e-10
ref|XP_011101505.1| PREDICTED: polyadenylation and cleavage fact... 69 1e-09
ref|XP_012066438.1| PREDICTED: uncharacterized protein LOC105629... 68 3e-09
ref|XP_010243716.1| PREDICTED: flocculation protein FLO11-like i... 68 3e-09
ref|XP_010243711.1| PREDICTED: flocculation protein FLO11-like i... 68 3e-09
emb|CBI30249.3| unnamed protein product [Vitis vinifera] 68 3e-09
ref|XP_010278226.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA cle... 65 2e-08
ref|XP_004246564.1| PREDICTED: pre-mRNA cleavage complex 2 prote... 65 3e-08
gb|KDP42676.1| hypothetical protein JCGZ_23616 [Jatropha curcas] 64 4e-08
ref|XP_006341164.1| PREDICTED: uncharacterized protein LOC102593... 64 6e-08
ref|XP_007162855.1| hypothetical protein PHAVU_001G186700g [Phas... 63 8e-08
gb|KHN02255.1| Pre-mRNA cleavage complex 2 protein Pcf11 [Glycin... 62 2e-07
ref|XP_011094416.1| PREDICTED: polyadenylation and cleavage fact... 61 3e-07
ref|XP_009765949.1| PREDICTED: cyclin-dependent kinase 12-like i... 60 6e-07
ref|XP_011018891.1| PREDICTED: uncharacterized protein LOC105121... 60 8e-07
ref|XP_011018890.1| PREDICTED: uncharacterized protein LOC105121... 60 8e-07
>ref|XP_011651991.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X1 [Cucumis sativus]
Length = 1086
Score = 75.9 bits (185), Expect = 1e-11
Identities = 50/97 (51%), Positives = 61/97 (62%), Gaps = 10/97 (10%)
Frame = -3
Query: 262 MEMEXXXXXXXXXREPGPKKPRLAEEADR--NLNGRPFAAAG--TGSNLSRR------ER 113
MEME REPG KKPRLA+EADR N+NGRPF +G+N+ ++ +R
Sbjct: 1 MEMESSRRPFDRTREPGLKKPRLADEADRGANINGRPFPQRPVVSGNNIVQQPRFRPSDR 60
Query: 112 DSENSGSVRGPYXXXXXQPHELVSRYKTALAELTFNS 2
DS +S S RG Y Q ELVS+Y+TALAELTFNS
Sbjct: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNS 97
>ref|XP_011651992.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X2 [Cucumis sativus] gi|700203928|gb|KGN59061.1|
hypothetical protein Csa_3G750380 [Cucumis sativus]
Length = 1084
Score = 75.9 bits (185), Expect = 1e-11
Identities = 50/97 (51%), Positives = 61/97 (62%), Gaps = 10/97 (10%)
Frame = -3
Query: 262 MEMEXXXXXXXXXREPGPKKPRLAEEADR--NLNGRPFAAAG--TGSNLSRR------ER 113
MEME REPG KKPRLA+EADR N+NGRPF +G+N+ ++ +R
Sbjct: 1 MEMESSRRPFDRTREPGLKKPRLADEADRGANINGRPFPQRPVVSGNNIVQQPRFRPSDR 60
Query: 112 DSENSGSVRGPYXXXXXQPHELVSRYKTALAELTFNS 2
DS +S S RG Y Q ELVS+Y+TALAELTFNS
Sbjct: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNS 97
>ref|XP_008442799.1| PREDICTED: cell wall protein AWA1-like isoform X2 [Cucumis melo]
Length = 1084
Score = 75.9 bits (185), Expect = 1e-11
Identities = 50/97 (51%), Positives = 61/97 (62%), Gaps = 10/97 (10%)
Frame = -3
Query: 262 MEMEXXXXXXXXXREPGPKKPRLAEEADR--NLNGRPFAAAG--TGSNLSRR------ER 113
MEME REPG KKPRLA+EADR N+NGRPF +G+N+ ++ +R
Sbjct: 1 MEMESSRRPFDRTREPGLKKPRLADEADRGANINGRPFPQRPVVSGNNIVQQPRFRASDR 60
Query: 112 DSENSGSVRGPYXXXXXQPHELVSRYKTALAELTFNS 2
DS +S S RG Y Q ELVS+Y+TALAELTFNS
Sbjct: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNS 97
>ref|XP_008442798.1| PREDICTED: cell wall protein AWA1-like isoform X1 [Cucumis melo]
Length = 1086
Score = 75.9 bits (185), Expect = 1e-11
Identities = 50/97 (51%), Positives = 61/97 (62%), Gaps = 10/97 (10%)
Frame = -3
Query: 262 MEMEXXXXXXXXXREPGPKKPRLAEEADR--NLNGRPFAAAG--TGSNLSRR------ER 113
MEME REPG KKPRLA+EADR N+NGRPF +G+N+ ++ +R
Sbjct: 1 MEMESSRRPFDRTREPGLKKPRLADEADRGANINGRPFPQRPVVSGNNIVQQPRFRASDR 60
Query: 112 DSENSGSVRGPYXXXXXQPHELVSRYKTALAELTFNS 2
DS +S S RG Y Q ELVS+Y+TALAELTFNS
Sbjct: 61 DSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNS 97
>ref|XP_010654041.1| PREDICTED: polyadenylation and cleavage factor homolog 4 [Vitis
vinifera]
Length = 1086
Score = 71.6 bits (174), Expect = 2e-10
Identities = 49/93 (52%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Frame = -3
Query: 262 MEMEXXXXXXXXXREPGPKKPRLAEEADR--NLNGRPF----AAAGTGSNLSRRERDSEN 101
MEME REPG KKPRLAEEA+R N NGRPF AA S L ERD +
Sbjct: 1 MEMESSRRSFDRSREPGFKKPRLAEEAERGPNPNGRPFPQRPGAAPAASRLKTNERDVDR 60
Query: 100 SGSVRGPYXXXXXQPHELVSRYKTALAELTFNS 2
RG Y ELV++YKTALAELTFNS
Sbjct: 61 DDLGRGLYQQQH---QELVTQYKTALAELTFNS 90
>ref|XP_011101505.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like,
partial [Sesamum indicum]
Length = 1042
Score = 68.9 bits (167), Expect = 1e-09
Identities = 44/85 (51%), Positives = 56/85 (65%), Gaps = 12/85 (14%)
Frame = -3
Query: 220 EPGPKKPRLAEE---ADRNLNGRP-------FAAAGTGSNLSRRERDSENSGSVRGPYXX 71
EPG KKPRL+E+ ADR NGR + +G G++ +R+RDSE++ SVRGPY
Sbjct: 15 EPGLKKPRLSEDPVAADRISNGRAGFPQRSAVSNSGGGASRPQRDRDSESTDSVRGPYQL 74
Query: 70 XXXQP--HELVSRYKTALAELTFNS 2
Q ELV++YKTALAELTFNS
Sbjct: 75 QSGQQLHQELVTQYKTALAELTFNS 99
>ref|XP_012066438.1| PREDICTED: uncharacterized protein LOC105629451 [Jatropha curcas]
Length = 1098
Score = 67.8 bits (164), Expect = 3e-09
Identities = 47/99 (47%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Frame = -3
Query: 262 MEMEXXXXXXXXXREPGPKKPRLAEEADRNLNGRPFA-----------AAGTGSNLSRRE 116
MEME REPG KKPRLA++ NLNGRPF+ AA + +
Sbjct: 1 MEMESTRRSFDRSREPGLKKPRLADQQP-NLNGRPFSQRPTAALPPPSAAASARFRVNSD 59
Query: 115 RDSENSGSVRGPYXXXXXQPH-ELVSRYKTALAELTFNS 2
RDSE++ S RG P+ ELVS+YKTALAELTFNS
Sbjct: 60 RDSESNDSSRGGAYQPQSLPYQELVSQYKTALAELTFNS 98
>ref|XP_010243716.1| PREDICTED: flocculation protein FLO11-like isoform X2 [Nelumbo
nucifera]
Length = 1020
Score = 67.8 bits (164), Expect = 3e-09
Identities = 52/102 (50%), Positives = 56/102 (54%), Gaps = 15/102 (14%)
Frame = -3
Query: 262 MEMEXXXXXXXXXREPGPKKPRLAEEA--DRNLNG-----RPF-------AAAGTGSNLS 125
MEME REPG KKPRLAEEA DR+ NG RPF + AG G LS
Sbjct: 1 MEMESTRRSIDRSREPGLKKPRLAEEAERDRSSNGVVDRERPFPQRVSSVSGAGAGPLLS 60
Query: 124 R-RERDSENSGSVRGPYXXXXXQPHELVSRYKTALAELTFNS 2
R R + E SVRG Y ELVS+YK ALAELTFNS
Sbjct: 61 RFRTNERERDDSVRGAYQQQQQL-QELVSQYKNALAELTFNS 101
>ref|XP_010243711.1| PREDICTED: flocculation protein FLO11-like isoform X1 [Nelumbo
nucifera]
Length = 1054
Score = 67.8 bits (164), Expect = 3e-09
Identities = 52/102 (50%), Positives = 56/102 (54%), Gaps = 15/102 (14%)
Frame = -3
Query: 262 MEMEXXXXXXXXXREPGPKKPRLAEEA--DRNLNG-----RPF-------AAAGTGSNLS 125
MEME REPG KKPRLAEEA DR+ NG RPF + AG G LS
Sbjct: 1 MEMESTRRSIDRSREPGLKKPRLAEEAERDRSSNGVVDRERPFPQRVSSVSGAGAGPLLS 60
Query: 124 R-RERDSENSGSVRGPYXXXXXQPHELVSRYKTALAELTFNS 2
R R + E SVRG Y ELVS+YK ALAELTFNS
Sbjct: 61 RFRTNERERDDSVRGAYQQQQQL-QELVSQYKNALAELTFNS 101
>emb|CBI30249.3| unnamed protein product [Vitis vinifera]
Length = 1049
Score = 67.8 bits (164), Expect = 3e-09
Identities = 44/79 (55%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Frame = -3
Query: 220 EPGPKKPRLAEEADR--NLNGRPF----AAAGTGSNLSRRERDSENSGSVRGPYXXXXXQ 59
EPG KKPRLAEEA+R N NGRPF AA S L ERD + RG Y
Sbjct: 94 EPGFKKPRLAEEAERGPNPNGRPFPQRPGAAPAASRLKTNERDVDRDDLGRGLYQQQH-- 151
Query: 58 PHELVSRYKTALAELTFNS 2
ELV++YKTALAELTFNS
Sbjct: 152 -QELVTQYKTALAELTFNS 169
>ref|XP_010278226.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA cleavage complex 2 protein
Pcf11-like [Nelumbo nucifera]
Length = 1138
Score = 65.5 bits (158), Expect = 2e-08
Identities = 46/90 (51%), Positives = 53/90 (58%), Gaps = 17/90 (18%)
Frame = -3
Query: 220 EPGPKKPRLAEEADRNLNG--------RPF------AAAGTGSN--LSR-RERDSENSGS 92
EPG KKPRLAEEA+R+ + RPF A +G G+ LSR R D E S
Sbjct: 13 EPGLKKPRLAEEAERDRSSNSVVVDRERPFPQRGASAVSGAGARPLLSRFRTNDRERDDS 72
Query: 91 VRGPYXXXXXQPHELVSRYKTALAELTFNS 2
VRG Y Q ELV++YKTALAELTFNS
Sbjct: 73 VRGTYQHQQQQHQELVTQYKTALAELTFNS 102
>ref|XP_004246564.1| PREDICTED: pre-mRNA cleavage complex 2 protein Pcf11-like [Solanum
lycopersicum]
Length = 1040
Score = 64.7 bits (156), Expect = 3e-08
Identities = 41/80 (51%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Frame = -3
Query: 220 EPGPKKPRLAEE---ADRNLNGRPF----AAAGTGSNLSRRERDSENSGSVRGPYXXXXX 62
EPGPKKPRL E +R NGR F A + S + DSENS S+RG +
Sbjct: 16 EPGPKKPRLVEAPIGTERGSNGRSFIPQRGAGNSRIRASDKGGDSENSDSIRGSFQQQTQ 75
Query: 61 QPHELVSRYKTALAELTFNS 2
ELVS+YKTALAELTFNS
Sbjct: 76 H-QELVSQYKTALAELTFNS 94
>gb|KDP42676.1| hypothetical protein JCGZ_23616 [Jatropha curcas]
Length = 1096
Score = 63.9 bits (154), Expect = 4e-08
Identities = 42/85 (49%), Positives = 51/85 (60%), Gaps = 12/85 (14%)
Frame = -3
Query: 220 EPGPKKPRLAEEADRNLNGRPFA-----------AAGTGSNLSRRERDSENSGSVRGPYX 74
EPG KKPRLA++ NLNGRPF+ AA + +RDSE++ S RG
Sbjct: 13 EPGLKKPRLADQQP-NLNGRPFSQRPTAALPPPSAAASARFRVNSDRDSESNDSSRGGAY 71
Query: 73 XXXXQPH-ELVSRYKTALAELTFNS 2
P+ ELVS+YKTALAELTFNS
Sbjct: 72 QPQSLPYQELVSQYKTALAELTFNS 96
>ref|XP_006341164.1| PREDICTED: uncharacterized protein LOC102593629 [Solanum tuberosum]
Length = 1046
Score = 63.5 bits (153), Expect = 6e-08
Identities = 43/85 (50%), Positives = 48/85 (56%), Gaps = 12/85 (14%)
Frame = -3
Query: 220 EPGPKKPRLAEE---ADRNLNGRPF----AAAGTGSNLSRRERDSENSGSVRGPYXXXXX 62
EPGPKKPRL E +R NGR F A + S R DSENS S+RG +
Sbjct: 16 EPGPKKPRLIEAPIGTERGSNGRSFIPQRGAGNSRIRASDRGGDSENSDSIRGSFQQQQQ 75
Query: 61 QPH-----ELVSRYKTALAELTFNS 2
Q ELVS+YKTALAELTFNS
Sbjct: 76 QQQQTQHQELVSQYKTALAELTFNS 100
>ref|XP_007162855.1| hypothetical protein PHAVU_001G186700g [Phaseolus vulgaris]
gi|561036319|gb|ESW34849.1| hypothetical protein
PHAVU_001G186700g [Phaseolus vulgaris]
Length = 1026
Score = 63.2 bits (152), Expect = 8e-08
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Frame = -3
Query: 262 MEMEXXXXXXXXXREPGPKKPRLAEEAD-----RNLNGRPFAAAGTGSNLSRRERDSENS 98
M ME REPGPKKPRL EE + G A+G + + +RDSE+S
Sbjct: 1 MNMESTRRSLDRSREPGPKKPRLIEELSARQLPQRQQGSGAVASGVSARVRVNDRDSESS 60
Query: 97 GSVRGPYXXXXXQPH-ELVSRYKTALAELTFNS 2
RG PH ELV++Y+TALAELTFNS
Sbjct: 61 DLGRGGGYHPQSPPHDELVAQYRTALAELTFNS 93
>gb|KHN02255.1| Pre-mRNA cleavage complex 2 protein Pcf11 [Glycine soja]
Length = 1027
Score = 62.0 bits (149), Expect = 2e-07
Identities = 41/75 (54%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = -3
Query: 220 EPGPKKPRLAEEAD-RNLNGRPFAAAGTGSNLSRRE-RDSENSGSVRGPYXXXXXQPHEL 47
EPGPKKPRL EE + R L RP A S R RDSE S RG Y EL
Sbjct: 12 EPGPKKPRLIEELNARQLPQRPTAVTTLPSTRFRAYGRDSEISDLGRGGYQPQPPPHQEL 71
Query: 46 VSRYKTALAELTFNS 2
V++YKTALAELTFNS
Sbjct: 72 VTQYKTALAELTFNS 86
>ref|XP_011094416.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
[Sesamum indicum]
Length = 1091
Score = 61.2 bits (147), Expect = 3e-07
Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 10/83 (12%)
Frame = -3
Query: 220 EPGPKKPRLAEE---ADRNLNGRPF-----AAAGTGSNLSRRERDSENSGSVRGPYXXXX 65
EPG KKPRL E+ ADR+ N R A +G +R+RDSE+SG+VRG Y
Sbjct: 15 EPGLKKPRLTEDHAAADRSSNVRTGFVQRPALPNSGLARVQRDRDSESSGAVRGLYQQQP 74
Query: 64 XQP--HELVSRYKTALAELTFNS 2
ELV++YKTAL+ELTFNS
Sbjct: 75 GHQLHQELVNQYKTALSELTFNS 97
>ref|XP_009765949.1| PREDICTED: cyclin-dependent kinase 12-like isoform X1 [Nicotiana
sylvestris]
Length = 1035
Score = 60.1 bits (144), Expect = 6e-07
Identities = 38/75 (50%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = -3
Query: 220 EPGPKKPRLAEEADR--NLNGRPFAAAGTGSNLSRRERDSENSGSVRGPYXXXXXQPHEL 47
EPGPKKPRL E + NG F + ++ SR NS S+RGPY EL
Sbjct: 16 EPGPKKPRLTEAGTERSSSNGSSFISQRAAASNSR------NSDSIRGPYQQQQQH-QEL 68
Query: 46 VSRYKTALAELTFNS 2
VS+YKTALAELTFNS
Sbjct: 69 VSQYKTALAELTFNS 83
>ref|XP_011018891.1| PREDICTED: uncharacterized protein LOC105121792 isoform X2 [Populus
euphratica]
Length = 1084
Score = 59.7 bits (143), Expect = 8e-07
Identities = 45/96 (46%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Frame = -3
Query: 262 MEMEXXXXXXXXXREPGPKKPRLAEEADRNLNGRPF----AAAGTGSNLSRRERDSENSG 95
MEME REPG KKPRLAEE N GRPF AAA + +RD +++
Sbjct: 1 MEMESTRRSFDRSREPGLKKPRLAEE-QANHKGRPFTQRPAAAPSARYRPGVDRDLDSND 59
Query: 94 SVRGPYXXXXXQPH-----ELVSRYKTALAELTFNS 2
S R P ELVS+YKTALAELTFNS
Sbjct: 60 SNRSSAYQPQPVPQPQQYQELVSQYKTALAELTFNS 95
>ref|XP_011018890.1| PREDICTED: uncharacterized protein LOC105121792 isoform X1 [Populus
euphratica]
Length = 1092
Score = 59.7 bits (143), Expect = 8e-07
Identities = 45/96 (46%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Frame = -3
Query: 262 MEMEXXXXXXXXXREPGPKKPRLAEEADRNLNGRPF----AAAGTGSNLSRRERDSENSG 95
MEME REPG KKPRLAEE N GRPF AAA + +RD +++
Sbjct: 1 MEMESTRRSFDRSREPGLKKPRLAEE-QANHKGRPFTQRPAAAPSARYRPGVDRDLDSND 59
Query: 94 SVRGPYXXXXXQPH-----ELVSRYKTALAELTFNS 2
S R P ELVS+YKTALAELTFNS
Sbjct: 60 SNRSSAYQPQPVPQPQQYQELVSQYKTALAELTFNS 95