BLASTX nr result
ID: Cornus23_contig00012276
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00012276
(257 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata] 67 7e-09
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica] 62 1e-07
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] 62 2e-07
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata] 61 4e-07
ref|XP_010252639.1| PREDICTED: DNA topoisomerase 1-like [Nelumbo... 60 8e-07
gb|KNA12761.1| hypothetical protein SOVF_122990 isoform C [Spina... 59 1e-06
gb|KNA12760.1| hypothetical protein SOVF_122990 isoform B [Spina... 59 1e-06
dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis] 59 1e-06
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g... 59 1e-06
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata] 59 1e-06
dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35] 58 2e-06
dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana] 58 2e-06
dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa] 58 2e-06
ref|XP_010266803.1| PREDICTED: DNA topoisomerase 1-like [Nelumbo... 57 5e-06
dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila] 56 9e-06
>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
Length = 894
Score = 66.6 bits (161), Expect = 7e-09
Identities = 39/85 (45%), Positives = 48/85 (56%)
Frame = +2
Query: 2 NRGPGNSGLVSPPSQKPGVNKYXXXXXXXXXXXXKFQLKSNAVASTSNFYDSDEDKPLAS 181
N+G NS S P KP +N+Y KF+LK+NA ST Y+SD++K L S
Sbjct: 163 NKGLINSSPASLPVPKPEINRYSDDSDDEIPLSSKFRLKANAGTSTVKSYESDDNKTLVS 222
Query: 182 KLQQNGSITRDNQLKKSSTVVNKRP 256
QQNGSI R + KSS VNKRP
Sbjct: 223 NFQQNGSINRGS---KSSIKVNKRP 244
>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
Length = 927
Score = 62.4 bits (150), Expect = 1e-07
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = +2
Query: 104 KFQLKSNAVASTSNFYDSDEDKPLASKLQQNGSITRDNQLKKSSTVVNKRP 256
+F KS+ STS YDSDE KPLA+K+QQNGS++RD + KS+++ NKRP
Sbjct: 201 RFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSVSRDGPMNKSASLSNKRP 251
>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
Length = 910
Score = 61.6 bits (148), Expect = 2e-07
Identities = 31/51 (60%), Positives = 34/51 (66%)
Frame = +2
Query: 104 KFQLKSNAVASTSNFYDSDEDKPLASKLQQNGSITRDNQLKKSSTVVNKRP 256
+F LKS STS YDSD+DKPLA KLQ NGS RD Q K S + NKRP
Sbjct: 209 RFPLKSGVGESTSKAYDSDDDKPLAKKLQHNGSAMRDGQPNKYSNMSNKRP 259
>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
Length = 925
Score = 60.8 bits (146), Expect = 4e-07
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = +2
Query: 104 KFQLKSNAVASTSNFYDSDEDKPLASKLQQNGSITRDNQLKKSSTVVNKRP 256
+F KS+ STS YDSDE KPLA+K+QQNGS +RD + KS+++ NKRP
Sbjct: 201 RFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSASLSNKRP 251
>ref|XP_010252639.1| PREDICTED: DNA topoisomerase 1-like [Nelumbo nucifera]
Length = 883
Score = 59.7 bits (143), Expect = 8e-07
Identities = 31/51 (60%), Positives = 37/51 (72%)
Frame = +2
Query: 104 KFQLKSNAVASTSNFYDSDEDKPLASKLQQNGSITRDNQLKKSSTVVNKRP 256
KFQLK+N V S+ YDSDE+KPL K QQNGS +DN+L KS +NKRP
Sbjct: 191 KFQLKTN-VGSSVKKYDSDEEKPLIFKFQQNGSSKKDNELSKSLKSLNKRP 240
>gb|KNA12761.1| hypothetical protein SOVF_122990 isoform C [Spinacia oleracea]
Length = 1057
Score = 59.3 bits (142), Expect = 1e-06
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +2
Query: 104 KFQLKSNAVASTSNFYDSDEDKPLASKLQQNGSITRDNQLKKSSTVVNKRP 256
K Q+K N+ ++ + DSDEDKPLASKLQQNGSI R+ Q K+ + KRP
Sbjct: 348 KLQMKGNSGTTSRKYDDSDEDKPLASKLQQNGSIKRETQSNKTPVSLGKRP 398
>gb|KNA12760.1| hypothetical protein SOVF_122990 isoform B [Spinacia oleracea]
Length = 625
Score = 59.3 bits (142), Expect = 1e-06
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +2
Query: 104 KFQLKSNAVASTSNFYDSDEDKPLASKLQQNGSITRDNQLKKSSTVVNKRP 256
K Q+K N+ ++ + DSDEDKPLASKLQQNGSI R+ Q K+ + KRP
Sbjct: 348 KLQMKGNSGTTSRKYDDSDEDKPLASKLQQNGSIKRETQSNKTPVSLGKRP 398
>dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
Length = 926
Score = 59.3 bits (142), Expect = 1e-06
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +2
Query: 104 KFQLKSNAVASTSNFYDSDEDKPLASKLQQNGSITRDNQLKKSSTVVNKR 253
+F KS+ STS YDSDE KPLA+K+QQNGS +RD + KS++++NKR
Sbjct: 202 RFPSKSSLGESTSKSYDSDEKKPLATKVQQNGSASRDGPMNKSASLLNKR 251
>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
Length = 920
Score = 58.9 bits (141), Expect = 1e-06
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = +2
Query: 104 KFQLKSNAVASTSNFYDSDEDKPLASKLQQNGSITRDNQLKKSSTVVNKRP 256
+F KS+ STS YDSDE KPLA+K+Q NGS +RD+ + KS+++ NKRP
Sbjct: 202 RFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDSPMNKSASLSNKRP 252
>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
Length = 920
Score = 58.9 bits (141), Expect = 1e-06
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = +2
Query: 104 KFQLKSNAVASTSNFYDSDEDKPLASKLQQNGSITRDNQLKKSSTVVNKRP 256
+F KS+ STS YDSDE KPLA+K+Q NGS +RD+ + KS+++ NKRP
Sbjct: 202 RFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDSPMNKSASLSNKRP 252
>dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]
Length = 920
Score = 58.2 bits (139), Expect = 2e-06
Identities = 28/50 (56%), Positives = 37/50 (74%)
Frame = +2
Query: 104 KFQLKSNAVASTSNFYDSDEDKPLASKLQQNGSITRDNQLKKSSTVVNKR 253
+F KS+ STS YDSDE KPLA+K+QQNGS +RD + KS+++ NKR
Sbjct: 202 RFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSASLSNKR 251
>dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana]
Length = 920
Score = 58.2 bits (139), Expect = 2e-06
Identities = 28/50 (56%), Positives = 37/50 (74%)
Frame = +2
Query: 104 KFQLKSNAVASTSNFYDSDEDKPLASKLQQNGSITRDNQLKKSSTVVNKR 253
+F KS+ STS YDSDE KPLA+K+QQNGS +RD + KS+++ NKR
Sbjct: 202 RFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSASLSNKR 251
>dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]
Length = 926
Score = 58.2 bits (139), Expect = 2e-06
Identities = 28/50 (56%), Positives = 37/50 (74%)
Frame = +2
Query: 104 KFQLKSNAVASTSNFYDSDEDKPLASKLQQNGSITRDNQLKKSSTVVNKR 253
+F KS+ STS YDSDE KPLA+K+QQNGS +RD + KS+++ NKR
Sbjct: 202 RFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSASLSNKR 251
>ref|XP_010266803.1| PREDICTED: DNA topoisomerase 1-like [Nelumbo nucifera]
Length = 890
Score = 57.0 bits (136), Expect = 5e-06
Identities = 29/51 (56%), Positives = 34/51 (66%)
Frame = +2
Query: 104 KFQLKSNAVASTSNFYDSDEDKPLASKLQQNGSITRDNQLKKSSTVVNKRP 256
K +LK + S FYDS E+KPL SKLQQNGS RDN+ KS +NKRP
Sbjct: 193 KLKLKPSVGLSGKKFYDSGEEKPLVSKLQQNGSSKRDNEPLKSPKNLNKRP 243
>dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]
Length = 926
Score = 56.2 bits (134), Expect = 9e-06
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = +2
Query: 104 KFQLKSNAVASTSNFYDSDEDKPLASKLQQNGSITRDNQLKKSSTVVNKR 253
+F KS+ STS +DSDE KPLA+K+QQNGS +RD + KS+++ NKR
Sbjct: 202 RFPSKSSLGESTSKSHDSDEKKPLAAKVQQNGSASRDGPMNKSASLSNKR 251