BLASTX nr result
ID: Cornus23_contig00012066
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00012066
(491 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP07797.1| unnamed protein product [Coffea canephora] 42 2e-06
ref|XP_010257162.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 42 2e-06
ref|XP_010241213.1| PREDICTED: DNA topoisomerase 2-like isoform ... 40 4e-06
ref|XP_010241214.1| PREDICTED: DNA topoisomerase 2-like isoform ... 40 4e-06
ref|XP_008231457.1| PREDICTED: DNA topoisomerase 2 isoform X1 [P... 39 4e-06
ref|XP_007220582.1| hypothetical protein PRUPE_ppa000202mg [Prun... 39 4e-06
ref|XP_008231458.1| PREDICTED: DNA topoisomerase 2 isoform X2 [P... 39 4e-06
ref|XP_010920068.1| PREDICTED: DNA topoisomerase 2 [Elaeis guine... 41 6e-06
ref|XP_008779357.1| PREDICTED: DNA topoisomerase 2, partial [Pho... 41 6e-06
ref|XP_008778392.1| PREDICTED: DNA topoisomerase 2-like, partial... 41 6e-06
ref|XP_008344657.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 39 7e-06
ref|XP_009354783.1| PREDICTED: DNA topoisomerase 2-like [Pyrus x... 39 9e-06
emb|CAJ44361.1| putative DNA topoisomerase II [Malus domestica] 39 9e-06
ref|XP_008375194.1| PREDICTED: DNA topoisomerase 2-like [Malus d... 39 9e-06
ref|XP_008346962.1| PREDICTED: DNA topoisomerase 2-like [Malus d... 39 9e-06
>emb|CDP07797.1| unnamed protein product [Coffea canephora]
Length = 1486
Score = 42.0 bits (97), Expect(2) = 2e-06
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +3
Query: 90 KGKNANLKAHAVKSHL*IFVNALI 161
K KNANLKAH+VK+HL +FVNALI
Sbjct: 342 KNKNANLKAHSVKNHLWVFVNALI 365
Score = 36.6 bits (83), Expect(2) = 2e-06
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2
Query: 260 SLGFNLMLLLVYTVTVAKSGVVESLLSWVNFKQS 361
S G L + VAKSGVVE+LLSW +FKQS
Sbjct: 384 SFGSKCELSQEFLKKVAKSGVVENLLSWADFKQS 417
>ref|XP_010257162.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-like [Nelumbo
nucifera]
Length = 1489
Score = 41.6 bits (96), Expect(2) = 2e-06
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +3
Query: 90 KGKNANLKAHAVKSHL*IFVNALI 161
K KNANLKAH VK+HL +FVNALI
Sbjct: 345 KNKNANLKAHTVKNHLWVFVNALI 368
Score = 36.6 bits (83), Expect(2) = 2e-06
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2
Query: 260 SLGFNLMLLLVYTVTVAKSGVVESLLSWVNFKQS 361
S G L + VAKSGVVE+LLSW +FKQS
Sbjct: 387 SFGSKCELSQEFLKKVAKSGVVENLLSWADFKQS 420
>ref|XP_010241213.1| PREDICTED: DNA topoisomerase 2-like isoform X1 [Nelumbo nucifera]
Length = 1504
Score = 40.4 bits (93), Expect(2) = 4e-06
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 90 KGKNANLKAHAVKSHL*IFVNALI 161
K KNANLKAH VK+HL +FVN+LI
Sbjct: 345 KNKNANLKAHTVKNHLWVFVNSLI 368
Score = 36.6 bits (83), Expect(2) = 4e-06
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2
Query: 260 SLGFNLMLLLVYTVTVAKSGVVESLLSWVNFKQS 361
S G L + VAKSGVVE+LLSW +FKQS
Sbjct: 387 SFGSKCELSQEFLKKVAKSGVVENLLSWADFKQS 420
>ref|XP_010241214.1| PREDICTED: DNA topoisomerase 2-like isoform X2 [Nelumbo nucifera]
Length = 1503
Score = 40.4 bits (93), Expect(2) = 4e-06
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 90 KGKNANLKAHAVKSHL*IFVNALI 161
K KNANLKAH VK+HL +FVN+LI
Sbjct: 345 KNKNANLKAHTVKNHLWVFVNSLI 368
Score = 36.6 bits (83), Expect(2) = 4e-06
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2
Query: 260 SLGFNLMLLLVYTVTVAKSGVVESLLSWVNFKQS 361
S G L + VAKSGVVE+LLSW +FKQS
Sbjct: 387 SFGSKCELSQEFLKKVAKSGVVENLLSWADFKQS 420
>ref|XP_008231457.1| PREDICTED: DNA topoisomerase 2 isoform X1 [Prunus mume]
Length = 1471
Score = 38.5 bits (88), Expect(2) = 4e-06
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 90 KGKNANLKAHAVKSHL*IFVNALI 161
K KNANLKAH VK++L +FVNALI
Sbjct: 344 KNKNANLKAHNVKNYLWVFVNALI 367
Score = 38.5 bits (88), Expect(2) = 4e-06
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 260 SLGFNLMLLLVYTVTVAKSGVVESLLSWVNFKQS 361
S G L + VAKSG+V+SLLSW NFKQ+
Sbjct: 386 SFGSKCELTPAFLTKVAKSGIVDSLLSWANFKQN 419
>ref|XP_007220582.1| hypothetical protein PRUPE_ppa000202mg [Prunus persica]
gi|462417044|gb|EMJ21781.1| hypothetical protein
PRUPE_ppa000202mg [Prunus persica]
Length = 1471
Score = 38.5 bits (88), Expect(2) = 4e-06
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 90 KGKNANLKAHAVKSHL*IFVNALI 161
K KNANLKAH VK++L +FVNALI
Sbjct: 344 KNKNANLKAHNVKNYLWVFVNALI 367
Score = 38.5 bits (88), Expect(2) = 4e-06
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 260 SLGFNLMLLLVYTVTVAKSGVVESLLSWVNFKQS 361
S G L + VAKSG+V+SLLSW NFKQ+
Sbjct: 386 SFGSKCELTPAFLTKVAKSGIVDSLLSWANFKQN 419
>ref|XP_008231458.1| PREDICTED: DNA topoisomerase 2 isoform X2 [Prunus mume]
Length = 1470
Score = 38.5 bits (88), Expect(2) = 4e-06
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 90 KGKNANLKAHAVKSHL*IFVNALI 161
K KNANLKAH VK++L +FVNALI
Sbjct: 344 KNKNANLKAHNVKNYLWVFVNALI 367
Score = 38.5 bits (88), Expect(2) = 4e-06
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 260 SLGFNLMLLLVYTVTVAKSGVVESLLSWVNFKQS 361
S G L + VAKSG+V+SLLSW NFKQ+
Sbjct: 386 SFGSKCELTPAFLTKVAKSGIVDSLLSWANFKQN 419
>ref|XP_010920068.1| PREDICTED: DNA topoisomerase 2 [Elaeis guineensis]
Length = 1486
Score = 40.8 bits (94), Expect(2) = 6e-06
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +3
Query: 90 KGKNANLKAHAVKSHL*IFVNALI 161
K KNANLKAH V+SHL +FVNALI
Sbjct: 347 KNKNANLKAHNVRSHLWVFVNALI 370
Score = 35.8 bits (81), Expect(2) = 6e-06
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = +2
Query: 260 SLGFNLMLLLVYTVTVAKSGVVESLLSWVNFKQS 361
S G L + VAKSGVV SLLSW +FKQS
Sbjct: 389 SFGSKCELSQEFLKKVAKSGVVNSLLSWADFKQS 422
>ref|XP_008779357.1| PREDICTED: DNA topoisomerase 2, partial [Phoenix dactylifera]
Length = 1401
Score = 40.8 bits (94), Expect(2) = 6e-06
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +3
Query: 90 KGKNANLKAHAVKSHL*IFVNALI 161
K KNANLKAH V+SHL +FVNALI
Sbjct: 268 KNKNANLKAHNVRSHLWVFVNALI 291
Score = 35.8 bits (81), Expect(2) = 6e-06
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = +2
Query: 260 SLGFNLMLLLVYTVTVAKSGVVESLLSWVNFKQS 361
S G L + VAKSGVV SLLSW +FKQS
Sbjct: 310 SFGSKCELSQEFLKKVAKSGVVNSLLSWADFKQS 343
>ref|XP_008778392.1| PREDICTED: DNA topoisomerase 2-like, partial [Phoenix dactylifera]
Length = 567
Score = 40.8 bits (94), Expect(2) = 6e-06
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +3
Query: 90 KGKNANLKAHAVKSHL*IFVNALI 161
K KNANLKAH V+SHL +FVNALI
Sbjct: 353 KNKNANLKAHNVRSHLWVFVNALI 376
Score = 35.8 bits (81), Expect(2) = 6e-06
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = +2
Query: 260 SLGFNLMLLLVYTVTVAKSGVVESLLSWVNFKQS 361
S G L + VAKSGVV SLLSW +FKQS
Sbjct: 395 SFGSKCELSQEFLKKVAKSGVVNSLLSWADFKQS 428
>ref|XP_008344657.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-like [Malus
domestica]
Length = 730
Score = 38.5 bits (88), Expect(2) = 7e-06
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 90 KGKNANLKAHAVKSHL*IFVNALI 161
K KNANLKAH VK++L +FVNALI
Sbjct: 348 KNKNANLKAHNVKNYLWVFVNALI 371
Score = 37.7 bits (86), Expect(2) = 7e-06
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 260 SLGFNLMLLLVYTVTVAKSGVVESLLSWVNFKQS 361
S G L + VAKSG+V+SLLSW NFKQ+
Sbjct: 390 SFGSKCELTPAFLSKVAKSGIVDSLLSWANFKQN 423
>ref|XP_009354783.1| PREDICTED: DNA topoisomerase 2-like [Pyrus x bretschneideri]
gi|694327895|ref|XP_009354789.1| PREDICTED: DNA
topoisomerase 2-like [Pyrus x bretschneideri]
Length = 1467
Score = 38.5 bits (88), Expect(2) = 9e-06
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 90 KGKNANLKAHAVKSHL*IFVNALI 161
K KNANLKAH VK++L +FVNALI
Sbjct: 347 KNKNANLKAHNVKNYLWVFVNALI 370
Score = 37.4 bits (85), Expect(2) = 9e-06
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 260 SLGFNLMLLLVYTVTVAKSGVVESLLSWVNFKQS 361
S G L + VAKSG+V+SLLSW NFKQ+
Sbjct: 389 SFGSKCELTPAFLNKVAKSGIVDSLLSWANFKQN 422
>emb|CAJ44361.1| putative DNA topoisomerase II [Malus domestica]
Length = 1467
Score = 38.5 bits (88), Expect(2) = 9e-06
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 90 KGKNANLKAHAVKSHL*IFVNALI 161
K KNANLKAH VK++L +FVNALI
Sbjct: 347 KNKNANLKAHNVKNYLWVFVNALI 370
Score = 37.4 bits (85), Expect(2) = 9e-06
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 260 SLGFNLMLLLVYTVTVAKSGVVESLLSWVNFKQS 361
S G L + VAKSG+V+SLLSW NFKQ+
Sbjct: 389 SFGSKCELTPAFLNKVAKSGIVDSLLSWANFKQN 422
>ref|XP_008375194.1| PREDICTED: DNA topoisomerase 2-like [Malus domestica]
Length = 1462
Score = 38.5 bits (88), Expect(2) = 9e-06
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 90 KGKNANLKAHAVKSHL*IFVNALI 161
K KNANLKAH VK++L +FVNALI
Sbjct: 347 KNKNANLKAHNVKNYLWVFVNALI 370
Score = 37.4 bits (85), Expect(2) = 9e-06
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 260 SLGFNLMLLLVYTVTVAKSGVVESLLSWVNFKQS 361
S G L + VAKSG+V+SLLSW NFKQ+
Sbjct: 389 SFGSKCELTPAFLNKVAKSGIVDSLLSWANFKQN 422
>ref|XP_008346962.1| PREDICTED: DNA topoisomerase 2-like [Malus domestica]
Length = 1435
Score = 38.5 bits (88), Expect(2) = 9e-06
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 90 KGKNANLKAHAVKSHL*IFVNALI 161
K KNANLKAH VK++L +FVNALI
Sbjct: 347 KNKNANLKAHNVKNYLWVFVNALI 370
Score = 37.4 bits (85), Expect(2) = 9e-06
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 260 SLGFNLMLLLVYTVTVAKSGVVESLLSWVNFKQS 361
S G L + VAKSG+V+SLLSW NFKQ+
Sbjct: 389 SFGSKCELTPAFLNKVAKSGIVDSLLSWANFKQN 422