BLASTX nr result
ID: Cornus23_contig00011972
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00011972
(264 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010036798.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 ... 73 7e-11
ref|XP_011089074.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 ... 70 6e-10
ref|XP_008235449.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 ... 69 2e-09
ref|XP_008235448.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 ... 69 2e-09
ref|XP_007200506.1| hypothetical protein PRUPE_ppa012906mg [Prun... 69 2e-09
emb|CDP03899.1| unnamed protein product [Coffea canephora] 67 5e-09
ref|XP_002532746.1| RING finger protein, putative [Ricinus commu... 67 7e-09
ref|XP_009790387.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-... 66 9e-09
ref|XP_009610387.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-... 66 9e-09
ref|XP_006367791.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-... 66 1e-08
ref|XP_004240456.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 ... 66 1e-08
ref|XP_010104180.1| TNF receptor-associated factor 6 [Morus nota... 65 2e-08
ref|XP_006443566.1| hypothetical protein CICLE_v10022263mg [Citr... 65 2e-08
ref|XP_012835242.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 ... 65 3e-08
ref|XP_009371908.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 ... 64 3e-08
ref|XP_009371902.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 ... 64 3e-08
ref|XP_008346210.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-... 64 3e-08
ref|XP_008346209.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-... 64 3e-08
ref|XP_008372489.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 ... 64 3e-08
ref|XP_008372488.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 ... 64 3e-08
>ref|XP_010036798.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 [Eucalyptus grandis]
gi|702494690|ref|XP_010036799.1| PREDICTED: E3
ubiquitin-protein ligase RNF4 [Eucalyptus grandis]
gi|629081994|gb|KCW48439.1| hypothetical protein
EUGRSUZ_K02140 [Eucalyptus grandis]
gi|629081995|gb|KCW48440.1| hypothetical protein
EUGRSUZ_K02140 [Eucalyptus grandis]
gi|629081996|gb|KCW48441.1| hypothetical protein
EUGRSUZ_K02140 [Eucalyptus grandis]
gi|629081997|gb|KCW48442.1| hypothetical protein
EUGRSUZ_K02140 [Eucalyptus grandis]
Length = 214
Score = 73.2 bits (178), Expect = 7e-11
Identities = 39/75 (52%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = -2
Query: 224 RRAPVQQIFFNGPCINLEESEN-VAKXXXXXXXXXXXXXPTFSCPVCKEPIVEETSTKCG 48
RR P Q GP INLE S N V + PTFSCP+C P+VEETSTKCG
Sbjct: 115 RRFPANQDRNCGPYINLESSNNYVTENVVSPPPPQPPKEPTFSCPICMGPLVEETSTKCG 174
Query: 47 HIFCKACINAAIAAR 3
HIFC+ACI AI+ +
Sbjct: 175 HIFCRACIRHAISTQ 189
>ref|XP_011089074.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 [Sesamum indicum]
gi|747083420|ref|XP_011089075.1| PREDICTED: E3
ubiquitin-protein ligase RNF4 [Sesamum indicum]
Length = 214
Score = 70.1 bits (170), Expect = 6e-10
Identities = 42/83 (50%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Frame = -2
Query: 233 NIGRRAPVQQIFFNGPC-INLEESENVAKXXXXXXXXXXXXXP-----TFSCPVCKEPIV 72
N RR P Q N INLE S N + P TFSCPVC P+V
Sbjct: 106 NKRRRVPTNQTIINCDLYINLEGSSNSTRKSGQSSELPTVPPPPPQEPTFSCPVCMGPLV 165
Query: 71 EETSTKCGHIFCKACINAAIAAR 3
EE STKCGHIFCKACI AAIAA+
Sbjct: 166 EEMSTKCGHIFCKACIKAAIAAQ 188
>ref|XP_008235449.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 isoform X2 [Prunus
mume]
Length = 205
Score = 68.6 bits (166), Expect = 2e-09
Identities = 39/76 (51%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = -2
Query: 224 RRAPVQQIFFNGPCINLEESENVA--KXXXXXXXXXXXXXPTFSCPVCKEPIVEETSTKC 51
R AP Q I INLE + N + K PTFSCP+C P+VEE STKC
Sbjct: 106 RVAPNQTIINCDFYINLESNNNSSSTKESVAQPAPPPPKEPTFSCPICMAPLVEEMSTKC 165
Query: 50 GHIFCKACINAAIAAR 3
GHIFCKACI AAI A+
Sbjct: 166 GHIFCKACIRAAIGAQ 181
>ref|XP_008235448.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 isoform X1 [Prunus
mume]
Length = 222
Score = 68.6 bits (166), Expect = 2e-09
Identities = 39/76 (51%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = -2
Query: 224 RRAPVQQIFFNGPCINLEESENVA--KXXXXXXXXXXXXXPTFSCPVCKEPIVEETSTKC 51
R AP Q I INLE + N + K PTFSCP+C P+VEE STKC
Sbjct: 123 RVAPNQTIINCDFYINLESNNNSSSTKESVAQPAPPPPKEPTFSCPICMAPLVEEMSTKC 182
Query: 50 GHIFCKACINAAIAAR 3
GHIFCKACI AAI A+
Sbjct: 183 GHIFCKACIRAAIGAQ 198
>ref|XP_007200506.1| hypothetical protein PRUPE_ppa012906mg [Prunus persica]
gi|462395906|gb|EMJ01705.1| hypothetical protein
PRUPE_ppa012906mg [Prunus persica]
Length = 150
Score = 68.6 bits (166), Expect = 2e-09
Identities = 39/76 (51%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = -2
Query: 224 RRAPVQQIFFNGPCINLEESENVA--KXXXXXXXXXXXXXPTFSCPVCKEPIVEETSTKC 51
R AP Q I INLE + N + K PTFSCP+C P+VEE STKC
Sbjct: 51 RVAPNQTIINCDFYINLESNNNSSSTKESVAQPAPPPPKEPTFSCPICMAPLVEEMSTKC 110
Query: 50 GHIFCKACINAAIAAR 3
GHIFCKACI AAI A+
Sbjct: 111 GHIFCKACIRAAIGAQ 126
>emb|CDP03899.1| unnamed protein product [Coffea canephora]
Length = 219
Score = 67.0 bits (162), Expect = 5e-09
Identities = 40/86 (46%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Frame = -2
Query: 239 GGNIGRRAPVQQIFFNGPC-INLEESENVAKXXXXXXXXXXXXXP------TFSCPVCKE 81
G N RR Q F N INLE + N + P TF+CPVC
Sbjct: 110 GRNKHRRVSANQTFINCDLYINLEGASNSGRDNVNSMVSQPLPPPPPPKEPTFNCPVCMG 169
Query: 80 PIVEETSTKCGHIFCKACINAAIAAR 3
P+VEE STKCGHIFCKACI +AIAA+
Sbjct: 170 PLVEEMSTKCGHIFCKACIKSAIAAQ 195
>ref|XP_002532746.1| RING finger protein, putative [Ricinus communis]
gi|223527523|gb|EEF29648.1| RING finger protein,
putative [Ricinus communis]
Length = 224
Score = 66.6 bits (161), Expect = 7e-09
Identities = 36/86 (41%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = -2
Query: 257 TCMLSPGGNIGRRAPVQQIFFN-GPCINLEESENVAKXXXXXXXXXXXXXPTFSCPVCKE 81
T L+ N RR Q N +NLE S + + PTF+CP+C
Sbjct: 113 TTRLTYAQNKRRRVSSNQTIINCDHYVNLESSSSSMRDNIQPRPPPPPKEPTFNCPICMG 172
Query: 80 PIVEETSTKCGHIFCKACINAAIAAR 3
P +EETSTKCGHIFCKACI AI +
Sbjct: 173 PFIEETSTKCGHIFCKACIKTAIGVQ 198
>ref|XP_009790387.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana
sylvestris]
Length = 212
Score = 66.2 bits (160), Expect = 9e-09
Identities = 32/60 (53%), Positives = 38/60 (63%)
Frame = -2
Query: 182 INLEESENVAKXXXXXXXXXXXXXPTFSCPVCKEPIVEETSTKCGHIFCKACINAAIAAR 3
INLE + ++ PTFSCPVC P+VEE STKCGHIFCK CI A+IAA+
Sbjct: 129 INLEANSSLKTVTAQSVVPPKPKEPTFSCPVCMGPLVEEMSTKCGHIFCKGCIKASIAAQ 188
>ref|XP_009610387.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana
tomentosiformis]
Length = 246
Score = 66.2 bits (160), Expect = 9e-09
Identities = 32/60 (53%), Positives = 38/60 (63%)
Frame = -2
Query: 182 INLEESENVAKXXXXXXXXXXXXXPTFSCPVCKEPIVEETSTKCGHIFCKACINAAIAAR 3
INLE + ++ PTFSCPVC P+VEE STKCGHIFCK CI A+IAA+
Sbjct: 163 INLEANSSLKTVAAQSVVPPKPKEPTFSCPVCMGPLVEEMSTKCGHIFCKGCIKASIAAQ 222
>ref|XP_006367791.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Solanum
tuberosum]
Length = 215
Score = 65.9 bits (159), Expect = 1e-08
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -2
Query: 107 TFSCPVCKEPIVEETSTKCGHIFCKACINAAIAAR 3
TFSCPVC P+VEE STKCGHIFCKACI A+IAA+
Sbjct: 157 TFSCPVCMGPLVEEMSTKCGHIFCKACIKASIAAQ 191
>ref|XP_004240456.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 [Solanum lycopersicum]
gi|723704059|ref|XP_010321802.1| PREDICTED: E3
ubiquitin-protein ligase RNF4 [Solanum lycopersicum]
Length = 215
Score = 65.9 bits (159), Expect = 1e-08
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -2
Query: 107 TFSCPVCKEPIVEETSTKCGHIFCKACINAAIAAR 3
TFSCPVC P+VEE STKCGHIFCKACI A+IAA+
Sbjct: 157 TFSCPVCMGPLVEEMSTKCGHIFCKACIKASIAAQ 191
>ref|XP_010104180.1| TNF receptor-associated factor 6 [Morus notabilis]
gi|587911258|gb|EXB99112.1| TNF receptor-associated
factor 6 [Morus notabilis]
Length = 212
Score = 65.1 bits (157), Expect = 2e-08
Identities = 38/85 (44%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Frame = -2
Query: 239 GGNIGRRAPVQQIFFNGPC-INLEES-----ENVAKXXXXXXXXXXXXXPTFSCPVCKEP 78
G + RRA Q+ N +NLE S EN K TF+CP+C P
Sbjct: 106 GNHKCRRASPNQVVINCDLYVNLESSGSSMAENAKKPPPPPKEP------TFTCPICMGP 159
Query: 77 IVEETSTKCGHIFCKACINAAIAAR 3
+ EETSTKCGHIFCKACI AA+ A+
Sbjct: 160 LAEETSTKCGHIFCKACIKAAVNAQ 184
>ref|XP_006443566.1| hypothetical protein CICLE_v10022263mg [Citrus clementina]
gi|567902158|ref|XP_006443567.1| hypothetical protein
CICLE_v10022263mg [Citrus clementina]
gi|567902160|ref|XP_006443568.1| hypothetical protein
CICLE_v10022263mg [Citrus clementina]
gi|567902162|ref|XP_006443569.1| hypothetical protein
CICLE_v10022263mg [Citrus clementina]
gi|567902164|ref|XP_006443570.1| hypothetical protein
CICLE_v10022263mg [Citrus clementina]
gi|568851131|ref|XP_006479247.1| PREDICTED: E3
ubiquitin-protein ligase RNF4-like isoform X1 [Citrus
sinensis] gi|568851133|ref|XP_006479248.1| PREDICTED: E3
ubiquitin-protein ligase RNF4-like isoform X2 [Citrus
sinensis] gi|568851135|ref|XP_006479249.1| PREDICTED: E3
ubiquitin-protein ligase RNF4-like isoform X3 [Citrus
sinensis] gi|568851137|ref|XP_006479250.1| PREDICTED: E3
ubiquitin-protein ligase RNF4-like isoform X4 [Citrus
sinensis] gi|557545828|gb|ESR56806.1| hypothetical
protein CICLE_v10022263mg [Citrus clementina]
gi|557545829|gb|ESR56807.1| hypothetical protein
CICLE_v10022263mg [Citrus clementina]
gi|557545830|gb|ESR56808.1| hypothetical protein
CICLE_v10022263mg [Citrus clementina]
gi|557545831|gb|ESR56809.1| hypothetical protein
CICLE_v10022263mg [Citrus clementina]
gi|557545832|gb|ESR56810.1| hypothetical protein
CICLE_v10022263mg [Citrus clementina]
Length = 208
Score = 65.1 bits (157), Expect = 2e-08
Identities = 35/79 (44%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = -2
Query: 233 NIGRRAPVQQIFFNGPCINLEESENVAKXXXXXXXXXXXXXP--TFSCPVCKEPIVEETS 60
N RR P N INLE + N+ + TF+CP+C P+VEE S
Sbjct: 108 NKRRRVPTNPPIIN--YINLESTSNLMRENAGKPPPPPPPPKEPTFTCPICMGPLVEEMS 165
Query: 59 TKCGHIFCKACINAAIAAR 3
TKCGHIFCKACI +AIA +
Sbjct: 166 TKCGHIFCKACIKSAIATQ 184
>ref|XP_012835242.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 [Erythranthe guttatus]
gi|848869235|ref|XP_012835243.1| PREDICTED: E3
ubiquitin-protein ligase RNF4 [Erythranthe guttatus]
gi|604335265|gb|EYU39207.1| hypothetical protein
MIMGU_mgv1a014058mg [Erythranthe guttata]
gi|604335266|gb|EYU39208.1| hypothetical protein
MIMGU_mgv1a014058mg [Erythranthe guttata]
Length = 202
Score = 64.7 bits (156), Expect = 3e-08
Identities = 40/82 (48%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Frame = -2
Query: 224 RRAPVQQIFFNGPC-INLEESEN-------VAKXXXXXXXXXXXXXPTFSCPVCKEPIVE 69
RRAP Q N INLE S N + P FSC VC P+VE
Sbjct: 97 RRAPSNQTIINCDLYINLEGSSNNSTRKSGQSAVVAPPPPPPPPKEPVFSCAVCMGPLVE 156
Query: 68 ETSTKCGHIFCKACINAAIAAR 3
ETSTKCGHIFCK CI AAIAA+
Sbjct: 157 ETSTKCGHIFCKGCIKAAIAAQ 178
>ref|XP_009371908.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 isoform X2 [Pyrus x
bretschneideri]
Length = 211
Score = 64.3 bits (155), Expect = 3e-08
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -2
Query: 107 TFSCPVCKEPIVEETSTKCGHIFCKACINAAIAAR 3
TF+CP+C P+VEE STKCGHIFCKACI AAI A+
Sbjct: 153 TFTCPICMAPLVEEMSTKCGHIFCKACIKAAIGAQ 187
>ref|XP_009371902.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 isoform X1 [Pyrus x
bretschneideri]
Length = 213
Score = 64.3 bits (155), Expect = 3e-08
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -2
Query: 107 TFSCPVCKEPIVEETSTKCGHIFCKACINAAIAAR 3
TF+CP+C P+VEE STKCGHIFCKACI AAI A+
Sbjct: 155 TFTCPICMAPLVEEMSTKCGHIFCKACIKAAIGAQ 189
>ref|XP_008346210.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X2 [Malus
domestica]
Length = 211
Score = 64.3 bits (155), Expect = 3e-08
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -2
Query: 107 TFSCPVCKEPIVEETSTKCGHIFCKACINAAIAAR 3
TF+CP+C P+VEE STKCGHIFCKACI AAI A+
Sbjct: 153 TFTCPICMAPLVEEMSTKCGHIFCKACIKAAIGAQ 187
>ref|XP_008346209.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X1 [Malus
domestica]
Length = 213
Score = 64.3 bits (155), Expect = 3e-08
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -2
Query: 107 TFSCPVCKEPIVEETSTKCGHIFCKACINAAIAAR 3
TF+CP+C P+VEE STKCGHIFCKACI AAI A+
Sbjct: 155 TFTCPICMAPLVEEMSTKCGHIFCKACIKAAIGAQ 189
>ref|XP_008372489.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 isoform X2 [Malus
domestica]
Length = 211
Score = 64.3 bits (155), Expect = 3e-08
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -2
Query: 107 TFSCPVCKEPIVEETSTKCGHIFCKACINAAIAAR 3
TF+CP+C P+VEE STKCGHIFCKACI AAI A+
Sbjct: 153 TFTCPICMAPLVEEMSTKCGHIFCKACIKAAIGAQ 187
>ref|XP_008372488.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 isoform X1 [Malus
domestica]
Length = 213
Score = 64.3 bits (155), Expect = 3e-08
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -2
Query: 107 TFSCPVCKEPIVEETSTKCGHIFCKACINAAIAAR 3
TF+CP+C P+VEE STKCGHIFCKACI AAI A+
Sbjct: 155 TFTCPICMAPLVEEMSTKCGHIFCKACIKAAIGAQ 189