BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00011463
         (461 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16226.3| unnamed protein product [Vitis vinifera]              233   3e-59
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   233   3e-59
ref|XP_011081084.1| PREDICTED: DNA-directed RNA polymerase III s...   220   3e-55
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao...   220   3e-55
ref|XP_012471450.1| PREDICTED: DNA-directed RNA polymerase III s...   210   4e-52
gb|KDO73040.1| hypothetical protein CISIN_1g000828mg [Citrus sin...   206   5e-51
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...   206   5e-51
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr...   206   5e-51
ref|XP_012471451.1| PREDICTED: DNA-directed RNA polymerase III s...   205   1e-50
gb|KHG07033.1| DNA-directed RNA polymerase III subunit RPC1 [Gos...   202   1e-49
ref|XP_009358374.1| PREDICTED: DNA-directed RNA polymerase III s...   200   3e-49
ref|XP_008358068.1| PREDICTED: DNA-directed RNA polymerase III s...   200   3e-49
ref|XP_008358064.1| PREDICTED: DNA-directed RNA polymerase III s...   200   3e-49
emb|CDP06311.1| unnamed protein product [Coffea canephora]            200   4e-49
ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III s...   198   1e-48
ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III s...   192   8e-47
ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III s...   192   8e-47
ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III s...   189   5e-46
ref|XP_010535561.1| PREDICTED: DNA-directed RNA polymerase III s...   189   7e-46
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...   188   2e-45

>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  233 bits (595), Expect = 3e-59
 Identities = 116/153 (75%), Positives = 136/153 (88%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIGTLGVIHDRAKIIHNSLEEFSSAISHTKE 280
           IV++CTAMASSKKAVKCSRCGY+NG+VKKA+  LG+IHDR+KI   SLEE SSAISHTKE
Sbjct: 150 IVQKCTAMASSKKAVKCSRCGYMNGIVKKAVSVLGIIHDRSKIADGSLEECSSAISHTKE 209

Query: 279 SKASVNLTLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRPSVFVDG 100
           SKAS ++   L+P +VLSLFK M+D DC+LL L++RPEKL++TNI VPPIAIRPSVF+DG
Sbjct: 210 SKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLAERPEKLVLTNIGVPPIAIRPSVFMDG 269

Query: 99  GTQSNENDITERLKRIIQANASLHQELSETIST 1
           GTQSNEND+TERLKRIIQANASLHQEL +T ST
Sbjct: 270 GTQSNENDVTERLKRIIQANASLHQELQDTGST 302


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Vitis
           vinifera]
          Length = 1383

 Score =  233 bits (595), Expect = 3e-59
 Identities = 116/153 (75%), Positives = 136/153 (88%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIGTLGVIHDRAKIIHNSLEEFSSAISHTKE 280
           IV++CTAMASSKKAVKCSRCGY+NG+VKKA+  LG+IHDR+KI   SLEE SSAISHTKE
Sbjct: 150 IVQKCTAMASSKKAVKCSRCGYMNGIVKKAVSVLGIIHDRSKIADGSLEECSSAISHTKE 209

Query: 279 SKASVNLTLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRPSVFVDG 100
           SKAS ++   L+P +VLSLFK M+D DC+LL L++RPEKL++TNI VPPIAIRPSVF+DG
Sbjct: 210 SKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLAERPEKLVLTNIGVPPIAIRPSVFMDG 269

Query: 99  GTQSNENDITERLKRIIQANASLHQELSETIST 1
           GTQSNEND+TERLKRIIQANASLHQEL +T ST
Sbjct: 270 GTQSNENDVTERLKRIIQANASLHQELQDTGST 302


>ref|XP_011081084.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Sesamum
           indicum]
          Length = 1405

 Score =  220 bits (561), Expect = 3e-55
 Identities = 112/150 (74%), Positives = 125/150 (83%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIGTLGVIHDRAKIIHNSLEEFSSAISHTKE 280
           +VKRC AMA SK+AVKCSRCGYINGMVKK  G L + HDRAKI+ + LEE  SA+SHTK+
Sbjct: 153 VVKRCNAMAGSKRAVKCSRCGYINGMVKK--GPLKIQHDRAKIVDSDLEECQSAVSHTKD 210

Query: 279 SKASVNLTLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRPSVFVDG 100
           SK +VN +  +DP  V  L + MLD DCELLYL+DRPEKL+VTNI VPPIAIRPSVFVDG
Sbjct: 211 SKGNVNFSSIIDPKLVYQLLRNMLDEDCELLYLNDRPEKLMVTNILVPPIAIRPSVFVDG 270

Query: 99  GTQSNENDITERLKRIIQANASLHQELSET 10
           GTQSNENDITERLKRIIQANASL QEL ET
Sbjct: 271 GTQSNENDITERLKRIIQANASLRQELLET 300


>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
           gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
           [Theobroma cacao]
          Length = 1395

 Score =  220 bits (561), Expect = 3e-55
 Identities = 118/151 (78%), Positives = 131/151 (86%), Gaps = 1/151 (0%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIGTLGVIHDRAKIIHNSLEEFSSAISHTKE 280
           IVK+C+AMASSK AVKC RCGY+NG VKKA+  LG+IHDR+KI  NSLEEF SAISHTKE
Sbjct: 148 IVKKCSAMASSK-AVKCWRCGYVNGTVKKAVAMLGIIHDRSKINDNSLEEFRSAISHTKE 206

Query: 279 SKASVNL-TLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRPSVFVD 103
           SKAS N+ T  L+P +VLSLFK M D+DCELLYLSDRPEKLI+TNIAVPPI IRPSV +D
Sbjct: 207 SKASFNVATYVLNPVKVLSLFKRMTDLDCELLYLSDRPEKLIITNIAVPPIPIRPSVIMD 266

Query: 102 GGTQSNENDITERLKRIIQANASLHQELSET 10
            G+QSNENDITERLKRIIQANASL QEL ET
Sbjct: 267 -GSQSNENDITERLKRIIQANASLRQELVET 296


>ref|XP_012471450.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
           [Gossypium raimondii] gi|763752836|gb|KJB20224.1|
           hypothetical protein B456_003G139100 [Gossypium
           raimondii]
          Length = 1398

 Score =  210 bits (534), Expect = 4e-52
 Identities = 109/150 (72%), Positives = 126/150 (84%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIGTLGVIHDRAKIIHNSLEEFSSAISHTKE 280
           +VK+CTAMA  K AVKCSRCGY+NG VKKA   +GV HDR+K+  NSLEE  SAISHTKE
Sbjct: 153 VVKKCTAMAGGK-AVKCSRCGYLNGTVKKAPKMIGVFHDRSKVNDNSLEELKSAISHTKE 211

Query: 279 SKASVNLTLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRPSVFVDG 100
           SK+S+N +  L+P +VLSLFK M DVDCELLYLSDRPEK I+TNIAVPP AIRPSV VD 
Sbjct: 212 SKSSINTSSVLNPVKVLSLFKRMTDVDCELLYLSDRPEKFIITNIAVPPTAIRPSVPVD- 270

Query: 99  GTQSNENDITERLKRIIQANASLHQELSET 10
           G+QSNENDITERLKRIIQAN+SL Q+L ++
Sbjct: 271 GSQSNENDITERLKRIIQANSSLRQQLVDS 300


>gb|KDO73040.1| hypothetical protein CISIN_1g000828mg [Citrus sinensis]
           gi|641854233|gb|KDO73041.1| hypothetical protein
           CISIN_1g000828mg [Citrus sinensis]
          Length = 1265

 Score =  206 bits (524), Expect = 5e-51
 Identities = 111/153 (72%), Positives = 128/153 (83%), Gaps = 1/153 (0%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIGTLGVIHDRAKIIHNSLEEFSSAISHTKE 280
           IVK+C+ MAS  KAVKC RCGYINGMVKKA+  LG+IHDR+K+   SL+EF+SAI+HTKE
Sbjct: 18  IVKKCSTMAS--KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVT-ESLQEFASAITHTKE 74

Query: 279 SKASVNL-TLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRPSVFVD 103
           SKA+VN+ T  L+P  VL LFK M D DCE+LYLS+RPEKLI+TNIAVPPIAIRPSV +D
Sbjct: 75  SKAAVNVATYILNPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMD 134

Query: 102 GGTQSNENDITERLKRIIQANASLHQELSETIS 4
            G+QSNENDITERLKRIIQ NASL QEL E  S
Sbjct: 135 -GSQSNENDITERLKRIIQTNASLQQELVEANS 166


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           isoform X1 [Citrus sinensis]
           gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed
           RNA polymerase III subunit rpc1-like isoform X2 [Citrus
           sinensis]
          Length = 1404

 Score =  206 bits (524), Expect = 5e-51
 Identities = 111/153 (72%), Positives = 128/153 (83%), Gaps = 1/153 (0%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIGTLGVIHDRAKIIHNSLEEFSSAISHTKE 280
           IVK+C+ MAS  KAVKC RCGYINGMVKKA+  LG+IHDR+K+   SL+EF+SAI+HTKE
Sbjct: 157 IVKKCSTMAS--KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVT-ESLQEFASAITHTKE 213

Query: 279 SKASVNL-TLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRPSVFVD 103
           SKA+VN+ T  L+P  VL LFK M D DCE+LYLS+RPEKLI+TNIAVPPIAIRPSV +D
Sbjct: 214 SKAAVNVATYILNPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMD 273

Query: 102 GGTQSNENDITERLKRIIQANASLHQELSETIS 4
            G+QSNENDITERLKRIIQ NASL QEL E  S
Sbjct: 274 -GSQSNENDITERLKRIIQTNASLQQELVEANS 305


>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
           gi|557526635|gb|ESR37941.1| hypothetical protein
           CICLE_v10027681mg [Citrus clementina]
          Length = 1397

 Score =  206 bits (524), Expect = 5e-51
 Identities = 111/153 (72%), Positives = 128/153 (83%), Gaps = 1/153 (0%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIGTLGVIHDRAKIIHNSLEEFSSAISHTKE 280
           IVK+C+ MAS  KAVKC RCGYINGMVKKA+  LG+IHDR+K+   SL+EF+SAI+HTKE
Sbjct: 172 IVKKCSTMAS--KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVT-ESLQEFASAITHTKE 228

Query: 279 SKASVNL-TLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRPSVFVD 103
           SKA+VN+ T  L+P  VL LFK M D DCE+LYLS+RPEKLI+TNIAVPPIAIRPSV +D
Sbjct: 229 SKAAVNVATYILNPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMD 288

Query: 102 GGTQSNENDITERLKRIIQANASLHQELSETIS 4
            G+QSNENDITERLKRIIQ NASL QEL E  S
Sbjct: 289 -GSQSNENDITERLKRIIQTNASLQQELVEANS 320


>ref|XP_012471451.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
           [Gossypium raimondii]
          Length = 1395

 Score =  205 bits (521), Expect = 1e-50
 Identities = 107/150 (71%), Positives = 123/150 (82%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIGTLGVIHDRAKIIHNSLEEFSSAISHTKE 280
           +VK+CTAMA  K AVKCSRCGY+NG VKKA   +GV HDR+K+  NSLEE  SAISHTKE
Sbjct: 153 VVKKCTAMAGGK-AVKCSRCGYLNGTVKKAPKMIGVFHDRSKVNDNSLEELKSAISHTKE 211

Query: 279 SKASVNLTLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRPSVFVDG 100
           SK+S+N +  L+P +VLSLFK M DVDCELLYLSDRPEK I+TNIAVPP AIRPSV VDG
Sbjct: 212 SKSSINTSSVLNPVKVLSLFKRMTDVDCELLYLSDRPEKFIITNIAVPPTAIRPSVPVDG 271

Query: 99  GTQSNENDITERLKRIIQANASLHQELSET 10
               NENDITERLKRIIQAN+SL Q+L ++
Sbjct: 272 ----NENDITERLKRIIQANSSLRQQLVDS 297


>gb|KHG07033.1| DNA-directed RNA polymerase III subunit RPC1 [Gossypium arboreum]
          Length = 1050

 Score =  202 bits (513), Expect = 1e-49
 Identities = 106/150 (70%), Positives = 122/150 (81%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIGTLGVIHDRAKIIHNSLEEFSSAISHTKE 280
           +VK+CTAMA  K AVKCSRCGY+NG VKKA   +GV HDR+K+  NS EE  SAISHTKE
Sbjct: 153 VVKKCTAMAGGK-AVKCSRCGYLNGTVKKAPKMIGVFHDRSKVNDNSSEELKSAISHTKE 211

Query: 279 SKASVNLTLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRPSVFVDG 100
           SK+S+N +  L+P +VLSLFK M DVDCELLYLSDRPEK I+TNIAVPP AIRPSV VD 
Sbjct: 212 SKSSINTSSVLNPVKVLSLFKRMTDVDCELLYLSDRPEKFIITNIAVPPTAIRPSVPVD- 270

Query: 99  GTQSNENDITERLKRIIQANASLHQELSET 10
              SNENDITERLKRIIQAN+SL Q+L ++
Sbjct: 271 ---SNENDITERLKRIIQANSSLRQQLVDS 297


>ref|XP_009358374.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Pyrus
           x bretschneideri]
          Length = 864

 Score =  200 bits (509), Expect = 3e-49
 Identities = 103/153 (67%), Positives = 125/153 (81%), Gaps = 1/153 (0%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIGTLGVIHDRAKIIHNSLEEFSSAISHTKE 280
           IVK+C ++ ++ + VKCS+CG+ING VKKA+G LG+IHDR+K +   +++F SAISHTKE
Sbjct: 155 IVKKCNSLTTNNRPVKCSKCGFINGSVKKAVGVLGIIHDRSKFV-GVMDDFRSAISHTKE 213

Query: 279 SKASVN-LTLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRPSVFVD 103
           SKAS N  T  L+P RV SLFK M+D DCELLYLSDRPE LI+TNIAVPPI IRPSV VD
Sbjct: 214 SKASFNPATHNLNPARVFSLFKRMVDEDCELLYLSDRPENLIMTNIAVPPIPIRPSVIVD 273

Query: 102 GGTQSNENDITERLKRIIQANASLHQELSETIS 4
            G+QSNENDITERLKRIIQ+N+SL Q+L E  S
Sbjct: 274 -GSQSNENDITERLKRIIQSNSSLRQDLMEASS 305


>ref|XP_008358068.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
           [Malus domestica]
          Length = 1390

 Score =  200 bits (509), Expect = 3e-49
 Identities = 104/153 (67%), Positives = 125/153 (81%), Gaps = 1/153 (0%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIGTLGVIHDRAKIIHNSLEEFSSAISHTKE 280
           IVK+C ++ ++ + VKCS+CG+ING VKKA+G LG+IHDR+K I   +++F SAISHTKE
Sbjct: 155 IVKKCNSLTTNNRPVKCSKCGFINGSVKKAVGVLGIIHDRSKFI-GVMDDFRSAISHTKE 213

Query: 279 SKASVN-LTLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRPSVFVD 103
           SKAS N  T  L+P RV SLFK M+D DCELLYLSDRPE LI+TNIAVPPI IRPSV VD
Sbjct: 214 SKASFNPATHNLNPARVFSLFKRMVDEDCELLYLSDRPENLIMTNIAVPPIPIRPSVIVD 273

Query: 102 GGTQSNENDITERLKRIIQANASLHQELSETIS 4
            G+QSNENDITERLKRIIQ+N+SL Q+L E  S
Sbjct: 274 -GSQSNENDITERLKRIIQSNSSLRQDLIEASS 305


>ref|XP_008358064.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
           [Malus domestica]
          Length = 1419

 Score =  200 bits (509), Expect = 3e-49
 Identities = 104/153 (67%), Positives = 125/153 (81%), Gaps = 1/153 (0%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIGTLGVIHDRAKIIHNSLEEFSSAISHTKE 280
           IVK+C ++ ++ + VKCS+CG+ING VKKA+G LG+IHDR+K I   +++F SAISHTKE
Sbjct: 155 IVKKCNSLTTNNRPVKCSKCGFINGSVKKAVGVLGIIHDRSKFI-GVMDDFRSAISHTKE 213

Query: 279 SKASVN-LTLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRPSVFVD 103
           SKAS N  T  L+P RV SLFK M+D DCELLYLSDRPE LI+TNIAVPPI IRPSV VD
Sbjct: 214 SKASFNPATHNLNPARVFSLFKRMVDEDCELLYLSDRPENLIMTNIAVPPIPIRPSVIVD 273

Query: 102 GGTQSNENDITERLKRIIQANASLHQELSETIS 4
            G+QSNENDITERLKRIIQ+N+SL Q+L E  S
Sbjct: 274 -GSQSNENDITERLKRIIQSNSSLRQDLIEASS 305


>emb|CDP06311.1| unnamed protein product [Coffea canephora]
          Length = 312

 Score =  200 bits (508), Expect = 4e-49
 Identities = 101/151 (66%), Positives = 120/151 (79%), Gaps = 1/151 (0%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIGTLGVIHDRAKIIHNSLEEFSSAISHTKE 280
           +VKRC A+ASS+KA  CSRCGY+NGMVKK    LG++H+R K+  + L E+ SAISHTKE
Sbjct: 154 VVKRCNALASSRKAATCSRCGYVNGMVKKNTKMLGIMHERTKVNDSFLNEYGSAISHTKE 213

Query: 279 SKAS-VNLTLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRPSVFVD 103
           S  S  ++   +DP  V SL K MLD DCELLYL+DRPEKL+++ I VPPIAIRPSVFVD
Sbjct: 214 SNTSNFSVPDEIDPKVVYSLLKRMLDEDCELLYLNDRPEKLMISTIPVPPIAIRPSVFVD 273

Query: 102 GGTQSNENDITERLKRIIQANASLHQELSET 10
           GG QSNEND TERLKRIIQANASL QE+S+T
Sbjct: 274 GGMQSNENDTTERLKRIIQANASLRQEISDT 304


>ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nelumbo
           nucifera]
          Length = 1392

 Score =  198 bits (504), Expect = 1e-48
 Identities = 101/153 (66%), Positives = 120/153 (78%), Gaps = 6/153 (3%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIG------TLGVIHDRAKIIHNSLEEFSSA 298
           IVK+CT M SSKKA+KC+RCGYING VKK         TLG++HDR+K+   SLEE SSA
Sbjct: 153 IVKKCTTMLSSKKALKCTRCGYINGFVKKGASISGTGSTLGIVHDRSKVNDESLEECSSA 212

Query: 297 ISHTKESKASVNLTLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRP 118
           ISH KESKAS  +   L+P R+L+LFK M+D DCELLYL DRPEKLI+T+IAVPPIAIRP
Sbjct: 213 ISHKKESKASFRVVHVLNPVRILALFKRMVDEDCELLYLYDRPEKLIITDIAVPPIAIRP 272

Query: 117 SVFVDGGTQSNENDITERLKRIIQANASLHQEL 19
           SVF+D GT SNE+DIT +L  II+ANA L Q+L
Sbjct: 273 SVFMDAGTMSNEDDITSKLSAIIRANAPLRQDL 305


>ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
           [Nicotiana tomentosiformis]
           gi|697112874|ref|XP_009610320.1| PREDICTED: DNA-directed
           RNA polymerase III subunit rpc1 isoform X2 [Nicotiana
           tomentosiformis]
          Length = 1375

 Score =  192 bits (488), Expect = 8e-47
 Identities = 99/150 (66%), Positives = 120/150 (80%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIGTLGVIHDRAKIIHNSLEEFSSAISHTKE 280
           +VK+CT+M S +K V CS+CGY+NGMVKK  G L +IH+R    +  L+EF++AISH  E
Sbjct: 153 VVKKCTSMTSGQKTVTCSKCGYMNGMVKK--GQLKIIHERG---NRFLDEFNAAISHKIE 207

Query: 279 SKASVNLTLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRPSVFVDG 100
            K SV++   +DP  V SLFK M D DCELLYLSDRPEKL+VT+I VPPIAIRPSVFVDG
Sbjct: 208 LKTSVSVPPEIDPKAVYSLFKNMSDEDCELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDG 267

Query: 99  GTQSNENDITERLKRIIQANASLHQELSET 10
           GTQSNENDITERLKRIIQANA L +++S+T
Sbjct: 268 GTQSNENDITERLKRIIQANARLLEDISDT 297


>ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
           [Nicotiana tomentosiformis]
           gi|697112870|ref|XP_009610318.1| PREDICTED: DNA-directed
           RNA polymerase III subunit rpc1 isoform X1 [Nicotiana
           tomentosiformis]
          Length = 1390

 Score =  192 bits (488), Expect = 8e-47
 Identities = 99/150 (66%), Positives = 120/150 (80%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIGTLGVIHDRAKIIHNSLEEFSSAISHTKE 280
           +VK+CT+M S +K V CS+CGY+NGMVKK  G L +IH+R    +  L+EF++AISH  E
Sbjct: 153 VVKKCTSMTSGQKTVTCSKCGYMNGMVKK--GQLKIIHERG---NRFLDEFNAAISHKIE 207

Query: 279 SKASVNLTLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRPSVFVDG 100
            K SV++   +DP  V SLFK M D DCELLYLSDRPEKL+VT+I VPPIAIRPSVFVDG
Sbjct: 208 LKTSVSVPPEIDPKAVYSLFKNMSDEDCELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDG 267

Query: 99  GTQSNENDITERLKRIIQANASLHQELSET 10
           GTQSNENDITERLKRIIQANA L +++S+T
Sbjct: 268 GTQSNENDITERLKRIIQANARLLEDISDT 297


>ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
           sylvestris] gi|698510366|ref|XP_009800354.1| PREDICTED:
           DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
           sylvestris]
          Length = 1390

 Score =  189 bits (481), Expect = 5e-46
 Identities = 97/150 (64%), Positives = 120/150 (80%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIGTLGVIHDRAKIIHNSLEEFSSAISHTKE 280
           +VK+CT+M S +K+V CS+CGY+NGMVKK  G L +IH+R    +  L+EF++AISH  +
Sbjct: 153 VVKKCTSMTSGQKSVTCSKCGYMNGMVKK--GQLKIIHERG---NRFLDEFNAAISHKID 207

Query: 279 SKASVNLTLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRPSVFVDG 100
            K SV++   +DP  V SLFK M D DCELLYLSDRPEKL+VT+I VPPIAIRPSVFVDG
Sbjct: 208 LKTSVSVPPEIDPKAVYSLFKNMSDEDCELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDG 267

Query: 99  GTQSNENDITERLKRIIQANASLHQELSET 10
           GTQSNENDITERLKRIIQ NA L +++S+T
Sbjct: 268 GTQSNENDITERLKRIIQENARLLEDISDT 297


>ref|XP_010535561.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Tarenaya
           hassleriana]
          Length = 1376

 Score =  189 bits (480), Expect = 7e-46
 Identities = 99/152 (65%), Positives = 123/152 (80%), Gaps = 3/152 (1%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIGT--LGVIHDRAKIIHNSLEEFSSAISHT 286
           +VK+C+AMASSK  + C +CGY+NGMVKKA  +  +G+ HDR++I    +EEF SAISHT
Sbjct: 152 VVKKCSAMASSK-IITCKKCGYLNGMVKKAATSSGIGISHDRSRIHEGDVEEFKSAISHT 210

Query: 285 KESKASVN-LTLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRPSVF 109
           KES  ++N +T  L+P  VL+LFKGM + DCELLYL+DRPEKLI+T+IAVPPI+IRPSV 
Sbjct: 211 KESSGAINPITYVLNPVSVLALFKGMSNKDCELLYLADRPEKLIITSIAVPPISIRPSVI 270

Query: 108 VDGGTQSNENDITERLKRIIQANASLHQELSE 13
           + GGTQSNENDITERLKR+IQ NASL Q L E
Sbjct: 271 I-GGTQSNENDITERLKRVIQNNASLRQFLVE 301


>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           isoform X2 [Solanum tuberosum]
          Length = 1243

 Score =  188 bits (477), Expect = 2e-45
 Identities = 99/150 (66%), Positives = 117/150 (78%)
 Frame = -3

Query: 459 IVKRCTAMASSKKAVKCSRCGYINGMVKKAIGTLGVIHDRAKIIHNSLEEFSSAISHTKE 280
           +VKRC AMA  +K   CS+CGY+NGMVKK    L + H++   I   L+E + AIS  +E
Sbjct: 153 VVKRCNAMAGGQKTATCSKCGYMNGMVKKL--QLKITHEQGNRI---LDEINVAISDKRE 207

Query: 279 SKASVNLTLTLDPGRVLSLFKGMLDVDCELLYLSDRPEKLIVTNIAVPPIAIRPSVFVDG 100
            +ASV++   LDP  V SLFK M D DCELLYLSDRPEKL+VT+I VPPIAIRPSVFVDG
Sbjct: 208 LRASVSVPPELDPKVVYSLFKNMSDEDCELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDG 267

Query: 99  GTQSNENDITERLKRIIQANASLHQELSET 10
           GTQSNENDITERLKRIIQANASLHQE+S++
Sbjct: 268 GTQSNENDITERLKRIIQANASLHQEMSDS 297