BLASTX nr result
ID: Cornus23_contig00011302
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00011302
(397 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010112904.1| Cold-inducible RNA-binding protein [Morus no... 96 8e-18
ref|XP_002284323.1| PREDICTED: glycine-rich RNA-binding protein ... 96 8e-18
ref|XP_010313557.1| PREDICTED: cold-inducible RNA-binding protei... 87 6e-15
ref|XP_012064989.1| PREDICTED: glycine-rich RNA-binding, abscisi... 86 8e-15
ref|XP_002533105.1| cold-inducible RNA binding protein, putative... 86 1e-14
ref|XP_006363377.1| PREDICTED: cold-inducible RNA-binding protei... 86 1e-14
ref|XP_006424765.1| hypothetical protein CICLE_v10029673mg [Citr... 86 1e-14
ref|XP_011095595.1| PREDICTED: cold-inducible RNA-binding protei... 84 4e-14
ref|XP_009628435.1| PREDICTED: cold-inducible RNA-binding protei... 82 2e-13
emb|CDP09008.1| unnamed protein product [Coffea canephora] 81 4e-13
ref|XP_010260084.1| PREDICTED: cold-inducible RNA-binding protei... 80 6e-13
ref|XP_012443631.1| PREDICTED: cold-inducible RNA-binding protei... 80 8e-13
ref|XP_008457543.1| PREDICTED: cold-inducible RNA-binding protei... 80 8e-13
ref|XP_012854980.1| PREDICTED: cold-inducible RNA-binding protei... 78 2e-12
ref|XP_009358339.1| PREDICTED: cold-inducible RNA-binding protei... 77 4e-12
gb|KHG10601.1| Cold-inducible RNA-binding [Gossypium arboreum] 77 7e-12
ref|XP_011000290.1| PREDICTED: polyadenylate-binding protein 3 [... 76 1e-11
ref|XP_002299889.1| RNA recognition motif-containing family prot... 76 1e-11
ref|XP_006369511.1| hypothetical protein POPTR_0001s24300g [Popu... 76 1e-11
ref|XP_008357602.1| PREDICTED: glycine-rich RNA-binding protein ... 75 1e-11
>ref|XP_010112904.1| Cold-inducible RNA-binding protein [Morus notabilis]
gi|587948820|gb|EXC35053.1| Cold-inducible RNA-binding
protein [Morus notabilis]
Length = 94
Score = 96.3 bits (238), Expect = 8e-18
Identities = 46/56 (82%), Positives = 53/56 (94%)
Frame = -3
Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
V+D KTQRPKGFGFVT+ESEVEAQ ALK+MNGRIV GRLIFVEVAKT++PG++ATS
Sbjct: 39 VLDSKTQRPKGFGFVTYESEVEAQKALKAMNGRIVDGRLIFVEVAKTSKPGEEATS 94
>ref|XP_002284323.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial [Vitis
vinifera] gi|297746123|emb|CBI16179.3| unnamed protein
product [Vitis vinifera]
Length = 112
Score = 96.3 bits (238), Expect = 8e-18
Identities = 45/53 (84%), Positives = 50/53 (94%)
Frame = -3
Query: 389 DPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDAT 231
DPKTQRPKGFGFV FESEV+A+ ALK+MNGRIV GRLIFVE+AKTTRPG+DAT
Sbjct: 59 DPKTQRPKGFGFVKFESEVDAEKALKAMNGRIVRGRLIFVEIAKTTRPGEDAT 111
>ref|XP_010313557.1| PREDICTED: cold-inducible RNA-binding protein [Solanum
lycopersicum]
Length = 94
Score = 86.7 bits (213), Expect = 6e-15
Identities = 42/56 (75%), Positives = 48/56 (85%)
Frame = -3
Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
V DP+TQRPKGFGFVTFESE +AQNAL S+NGRIV GRLIFVEVA+TT ++ TS
Sbjct: 37 VKDPRTQRPKGFGFVTFESEADAQNALNSLNGRIVDGRLIFVEVAETTEAAENKTS 92
>ref|XP_012064989.1| PREDICTED: glycine-rich RNA-binding, abscisic acid-inducible
protein isoform X2 [Jatropha curcas]
Length = 94
Score = 86.3 bits (212), Expect = 8e-15
Identities = 40/56 (71%), Positives = 51/56 (91%)
Frame = -3
Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
VIDP+T++PKGFGFVTF+SE EA A+K+MNGRIV GRLI VEVAK+++PGDD++S
Sbjct: 39 VIDPRTRKPKGFGFVTFDSESEALKAMKTMNGRIVDGRLICVEVAKSSKPGDDSSS 94
>ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
gi|223527096|gb|EEF29277.1| cold-inducible RNA binding
protein, putative [Ricinus communis]
Length = 94
Score = 85.5 bits (210), Expect = 1e-14
Identities = 39/56 (69%), Positives = 50/56 (89%)
Frame = -3
Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
V+DP+TQ+PKGFGFVTF+SE +AQ ALK+MNGRIV GRL+FVEVAK+ G+DA++
Sbjct: 39 VLDPRTQKPKGFGFVTFDSESQAQKALKAMNGRIVDGRLLFVEVAKSINSGEDASA 94
>ref|XP_006363377.1| PREDICTED: cold-inducible RNA-binding protein-like [Solanum
tuberosum]
Length = 125
Score = 85.5 bits (210), Expect = 1e-14
Identities = 42/56 (75%), Positives = 48/56 (85%)
Frame = -3
Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
V DP+TQRPKGFGFVTFESE +AQNAL S+NGRIV GRLIFVEVA+TT ++ TS
Sbjct: 68 VKDPRTQRPKGFGFVTFESEADAQNALNSLNGRIVDGRLIFVEVAETTEAVENKTS 123
>ref|XP_006424765.1| hypothetical protein CICLE_v10029673mg [Citrus clementina]
gi|568870147|ref|XP_006488271.1| PREDICTED: glycine-rich
RNA-binding protein 4, mitochondrial-like [Citrus
sinensis] gi|557526699|gb|ESR38005.1| hypothetical
protein CICLE_v10029673mg [Citrus clementina]
Length = 94
Score = 85.5 bits (210), Expect = 1e-14
Identities = 40/55 (72%), Positives = 48/55 (87%)
Frame = -3
Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDAT 231
+ DPKTQRPKGFGF+TF+SE +AQ ALK+M+GRIV GRLIFVEVAK+ PG DA+
Sbjct: 39 ITDPKTQRPKGFGFITFQSEDDAQKALKTMDGRIVNGRLIFVEVAKSRSPGTDAS 93
>ref|XP_011095595.1| PREDICTED: cold-inducible RNA-binding protein-like [Sesamum
indicum]
Length = 92
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/49 (79%), Positives = 45/49 (91%)
Frame = -3
Query: 389 DPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPG 243
DP+TQRPKGFGFV F SE++AQNALK+MNGRIV GRLIFVE A+TT+PG
Sbjct: 41 DPRTQRPKGFGFVKFASELDAQNALKAMNGRIVDGRLIFVEFAETTKPG 89
>ref|XP_009628435.1| PREDICTED: cold-inducible RNA-binding protein
{ECO:0000312|EMBL:CAJ83306.1}-like [Nicotiana
tomentosiformis]
Length = 94
Score = 81.6 bits (200), Expect = 2e-13
Identities = 40/56 (71%), Positives = 48/56 (85%)
Frame = -3
Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
V DP+TQRPKGFGFVTFESE +A+NAL S+NGRIV GRLIFVEVA+ T+ ++ TS
Sbjct: 37 VKDPRTQRPKGFGFVTFESEEDARNALNSINGRIVDGRLIFVEVAQNTQATENKTS 92
>emb|CDP09008.1| unnamed protein product [Coffea canephora]
Length = 92
Score = 80.9 bits (198), Expect = 4e-13
Identities = 40/49 (81%), Positives = 44/49 (89%)
Frame = -3
Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTR 249
VIDP T+R KGFGFV F+SE +AQNALK+MNGRIV GRLIFVEVAKTTR
Sbjct: 38 VIDPITRRTKGFGFVQFDSETDAQNALKAMNGRIVNGRLIFVEVAKTTR 86
>ref|XP_010260084.1| PREDICTED: cold-inducible RNA-binding protein-like [Nelumbo
nucifera]
Length = 116
Score = 80.1 bits (196), Expect = 6e-13
Identities = 39/48 (81%), Positives = 44/48 (91%)
Frame = -3
Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTT 252
V DP+TQRPKGFGFVT+ESE EAQ ALK+MNGR+V GRLIFVEVAKT+
Sbjct: 60 VKDPRTQRPKGFGFVTYESENEAQKALKAMNGRMVDGRLIFVEVAKTS 107
>ref|XP_012443631.1| PREDICTED: cold-inducible RNA-binding protein-like [Gossypium
raimondii] gi|763788731|gb|KJB55727.1| hypothetical
protein B456_009G091800 [Gossypium raimondii]
gi|763788733|gb|KJB55729.1| hypothetical protein
B456_009G091800 [Gossypium raimondii]
gi|763788734|gb|KJB55730.1| hypothetical protein
B456_009G091800 [Gossypium raimondii]
Length = 94
Score = 79.7 bits (195), Expect = 8e-13
Identities = 40/54 (74%), Positives = 42/54 (77%)
Frame = -3
Query: 389 DPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
DPKTQRPKGFGFVTFE+E EAQ ALK+MNGRIV GRLIFVE A DA S
Sbjct: 41 DPKTQRPKGFGFVTFETEAEAQKALKAMNGRIVRGRLIFVEYANDKSQKTDADS 94
>ref|XP_008457543.1| PREDICTED: cold-inducible RNA-binding protein B [Cucumis melo]
Length = 95
Score = 79.7 bits (195), Expect = 8e-13
Identities = 39/54 (72%), Positives = 46/54 (85%)
Frame = -3
Query: 389 DPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
DP+TQRPKGFGFVTF+S VEA+ AL++M+GRIV GRLIFVE AKT + G D TS
Sbjct: 41 DPETQRPKGFGFVTFQSPVEAKKALQAMDGRIVDGRLIFVEFAKTRKHGVDPTS 94
>ref|XP_012854980.1| PREDICTED: cold-inducible RNA-binding protein-like [Erythranthe
guttatus]
Length = 98
Score = 78.2 bits (191), Expect = 2e-12
Identities = 40/54 (74%), Positives = 46/54 (85%)
Frame = -3
Query: 389 DPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
DP+TQRPKGFGFV F SE++AQNALKSMN RIV GRLIFVE AK+T+ D+ TS
Sbjct: 46 DPRTQRPKGFGFVKFSSEIDAQNALKSMNCRIVDGRLIFVEFAKSTKL-DNTTS 98
>ref|XP_009358339.1| PREDICTED: cold-inducible RNA-binding protein-like [Pyrus x
bretschneideri]
Length = 94
Score = 77.4 bits (189), Expect = 4e-12
Identities = 37/56 (66%), Positives = 47/56 (83%)
Frame = -3
Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
++D +T RPKGFGFVT++S+VEAQ ALK+MNGR+V GRLIFVEVA+T R +D S
Sbjct: 39 IMDRRTDRPKGFGFVTYQSDVEAQKALKAMNGRMVDGRLIFVEVAQTGRHENDTYS 94
>gb|KHG10601.1| Cold-inducible RNA-binding [Gossypium arboreum]
Length = 94
Score = 76.6 bits (187), Expect = 7e-12
Identities = 39/54 (72%), Positives = 41/54 (75%)
Frame = -3
Query: 389 DPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
D KTQRPKGFGFVTFE+E EAQ ALK+MNGRIV GRLIFVE A DA S
Sbjct: 41 DSKTQRPKGFGFVTFETEAEAQKALKAMNGRIVRGRLIFVEYANDKSQKTDADS 94
>ref|XP_011000290.1| PREDICTED: polyadenylate-binding protein 3 [Populus euphratica]
Length = 166
Score = 75.9 bits (185), Expect = 1e-11
Identities = 37/48 (77%), Positives = 41/48 (85%)
Frame = -3
Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTT 252
V++ KT RPKGFGFVTFESE +A ALK+MNGRIV GRLIFVEVAK T
Sbjct: 117 VVESKTLRPKGFGFVTFESEADAHKALKAMNGRIVNGRLIFVEVAKDT 164
>ref|XP_002299889.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222847147|gb|EEE84694.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 88
Score = 75.9 bits (185), Expect = 1e-11
Identities = 37/48 (77%), Positives = 41/48 (85%)
Frame = -3
Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTT 252
V++ KT RPKGFGFVTFESE +A ALK+MNGRIV GRLIFVEVAK T
Sbjct: 39 VVESKTLRPKGFGFVTFESEADAHKALKAMNGRIVNGRLIFVEVAKDT 86
>ref|XP_006369511.1| hypothetical protein POPTR_0001s24300g [Populus trichocarpa]
gi|550348074|gb|ERP66080.1| hypothetical protein
POPTR_0001s24300g [Populus trichocarpa]
Length = 119
Score = 75.9 bits (185), Expect = 1e-11
Identities = 37/48 (77%), Positives = 41/48 (85%)
Frame = -3
Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTT 252
V++ KT RPKGFGFVTFESE +A ALK+MNGRIV GRLIFVEVAK T
Sbjct: 70 VVESKTLRPKGFGFVTFESEADAHKALKAMNGRIVNGRLIFVEVAKDT 117
>ref|XP_008357602.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Malus domestica]
Length = 94
Score = 75.5 bits (184), Expect = 1e-11
Identities = 36/56 (64%), Positives = 47/56 (83%)
Frame = -3
Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
++D +T RPKGFGFVT++S+VEAQ ALK+M+GR+V GRLIFVEVA+T R +D S
Sbjct: 39 IMDRRTDRPKGFGFVTYQSDVEAQKALKAMDGRMVDGRLIFVEVAQTGRHENDTYS 94