BLASTX nr result

ID: Cornus23_contig00011302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00011302
         (397 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010112904.1| Cold-inducible RNA-binding protein [Morus no...    96   8e-18
ref|XP_002284323.1| PREDICTED: glycine-rich RNA-binding protein ...    96   8e-18
ref|XP_010313557.1| PREDICTED: cold-inducible RNA-binding protei...    87   6e-15
ref|XP_012064989.1| PREDICTED: glycine-rich RNA-binding, abscisi...    86   8e-15
ref|XP_002533105.1| cold-inducible RNA binding protein, putative...    86   1e-14
ref|XP_006363377.1| PREDICTED: cold-inducible RNA-binding protei...    86   1e-14
ref|XP_006424765.1| hypothetical protein CICLE_v10029673mg [Citr...    86   1e-14
ref|XP_011095595.1| PREDICTED: cold-inducible RNA-binding protei...    84   4e-14
ref|XP_009628435.1| PREDICTED: cold-inducible RNA-binding protei...    82   2e-13
emb|CDP09008.1| unnamed protein product [Coffea canephora]             81   4e-13
ref|XP_010260084.1| PREDICTED: cold-inducible RNA-binding protei...    80   6e-13
ref|XP_012443631.1| PREDICTED: cold-inducible RNA-binding protei...    80   8e-13
ref|XP_008457543.1| PREDICTED: cold-inducible RNA-binding protei...    80   8e-13
ref|XP_012854980.1| PREDICTED: cold-inducible RNA-binding protei...    78   2e-12
ref|XP_009358339.1| PREDICTED: cold-inducible RNA-binding protei...    77   4e-12
gb|KHG10601.1| Cold-inducible RNA-binding [Gossypium arboreum]         77   7e-12
ref|XP_011000290.1| PREDICTED: polyadenylate-binding protein 3 [...    76   1e-11
ref|XP_002299889.1| RNA recognition motif-containing family prot...    76   1e-11
ref|XP_006369511.1| hypothetical protein POPTR_0001s24300g [Popu...    76   1e-11
ref|XP_008357602.1| PREDICTED: glycine-rich RNA-binding protein ...    75   1e-11

>ref|XP_010112904.1| Cold-inducible RNA-binding protein [Morus notabilis]
           gi|587948820|gb|EXC35053.1| Cold-inducible RNA-binding
           protein [Morus notabilis]
          Length = 94

 Score = 96.3 bits (238), Expect = 8e-18
 Identities = 46/56 (82%), Positives = 53/56 (94%)
 Frame = -3

Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
           V+D KTQRPKGFGFVT+ESEVEAQ ALK+MNGRIV GRLIFVEVAKT++PG++ATS
Sbjct: 39  VLDSKTQRPKGFGFVTYESEVEAQKALKAMNGRIVDGRLIFVEVAKTSKPGEEATS 94


>ref|XP_002284323.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial [Vitis
           vinifera] gi|297746123|emb|CBI16179.3| unnamed protein
           product [Vitis vinifera]
          Length = 112

 Score = 96.3 bits (238), Expect = 8e-18
 Identities = 45/53 (84%), Positives = 50/53 (94%)
 Frame = -3

Query: 389 DPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDAT 231
           DPKTQRPKGFGFV FESEV+A+ ALK+MNGRIV GRLIFVE+AKTTRPG+DAT
Sbjct: 59  DPKTQRPKGFGFVKFESEVDAEKALKAMNGRIVRGRLIFVEIAKTTRPGEDAT 111


>ref|XP_010313557.1| PREDICTED: cold-inducible RNA-binding protein [Solanum
           lycopersicum]
          Length = 94

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 42/56 (75%), Positives = 48/56 (85%)
 Frame = -3

Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
           V DP+TQRPKGFGFVTFESE +AQNAL S+NGRIV GRLIFVEVA+TT   ++ TS
Sbjct: 37  VKDPRTQRPKGFGFVTFESEADAQNALNSLNGRIVDGRLIFVEVAETTEAAENKTS 92


>ref|XP_012064989.1| PREDICTED: glycine-rich RNA-binding, abscisic acid-inducible
           protein isoform X2 [Jatropha curcas]
          Length = 94

 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 40/56 (71%), Positives = 51/56 (91%)
 Frame = -3

Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
           VIDP+T++PKGFGFVTF+SE EA  A+K+MNGRIV GRLI VEVAK+++PGDD++S
Sbjct: 39  VIDPRTRKPKGFGFVTFDSESEALKAMKTMNGRIVDGRLICVEVAKSSKPGDDSSS 94


>ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
           gi|223527096|gb|EEF29277.1| cold-inducible RNA binding
           protein, putative [Ricinus communis]
          Length = 94

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 39/56 (69%), Positives = 50/56 (89%)
 Frame = -3

Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
           V+DP+TQ+PKGFGFVTF+SE +AQ ALK+MNGRIV GRL+FVEVAK+   G+DA++
Sbjct: 39  VLDPRTQKPKGFGFVTFDSESQAQKALKAMNGRIVDGRLLFVEVAKSINSGEDASA 94


>ref|XP_006363377.1| PREDICTED: cold-inducible RNA-binding protein-like [Solanum
           tuberosum]
          Length = 125

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 42/56 (75%), Positives = 48/56 (85%)
 Frame = -3

Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
           V DP+TQRPKGFGFVTFESE +AQNAL S+NGRIV GRLIFVEVA+TT   ++ TS
Sbjct: 68  VKDPRTQRPKGFGFVTFESEADAQNALNSLNGRIVDGRLIFVEVAETTEAVENKTS 123


>ref|XP_006424765.1| hypothetical protein CICLE_v10029673mg [Citrus clementina]
           gi|568870147|ref|XP_006488271.1| PREDICTED: glycine-rich
           RNA-binding protein 4, mitochondrial-like [Citrus
           sinensis] gi|557526699|gb|ESR38005.1| hypothetical
           protein CICLE_v10029673mg [Citrus clementina]
          Length = 94

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 40/55 (72%), Positives = 48/55 (87%)
 Frame = -3

Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDAT 231
           + DPKTQRPKGFGF+TF+SE +AQ ALK+M+GRIV GRLIFVEVAK+  PG DA+
Sbjct: 39  ITDPKTQRPKGFGFITFQSEDDAQKALKTMDGRIVNGRLIFVEVAKSRSPGTDAS 93


>ref|XP_011095595.1| PREDICTED: cold-inducible RNA-binding protein-like [Sesamum
           indicum]
          Length = 92

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 39/49 (79%), Positives = 45/49 (91%)
 Frame = -3

Query: 389 DPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPG 243
           DP+TQRPKGFGFV F SE++AQNALK+MNGRIV GRLIFVE A+TT+PG
Sbjct: 41  DPRTQRPKGFGFVKFASELDAQNALKAMNGRIVDGRLIFVEFAETTKPG 89


>ref|XP_009628435.1| PREDICTED: cold-inducible RNA-binding protein
           {ECO:0000312|EMBL:CAJ83306.1}-like [Nicotiana
           tomentosiformis]
          Length = 94

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 40/56 (71%), Positives = 48/56 (85%)
 Frame = -3

Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
           V DP+TQRPKGFGFVTFESE +A+NAL S+NGRIV GRLIFVEVA+ T+  ++ TS
Sbjct: 37  VKDPRTQRPKGFGFVTFESEEDARNALNSINGRIVDGRLIFVEVAQNTQATENKTS 92


>emb|CDP09008.1| unnamed protein product [Coffea canephora]
          Length = 92

 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 40/49 (81%), Positives = 44/49 (89%)
 Frame = -3

Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTR 249
           VIDP T+R KGFGFV F+SE +AQNALK+MNGRIV GRLIFVEVAKTTR
Sbjct: 38  VIDPITRRTKGFGFVQFDSETDAQNALKAMNGRIVNGRLIFVEVAKTTR 86


>ref|XP_010260084.1| PREDICTED: cold-inducible RNA-binding protein-like [Nelumbo
           nucifera]
          Length = 116

 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 39/48 (81%), Positives = 44/48 (91%)
 Frame = -3

Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTT 252
           V DP+TQRPKGFGFVT+ESE EAQ ALK+MNGR+V GRLIFVEVAKT+
Sbjct: 60  VKDPRTQRPKGFGFVTYESENEAQKALKAMNGRMVDGRLIFVEVAKTS 107


>ref|XP_012443631.1| PREDICTED: cold-inducible RNA-binding protein-like [Gossypium
           raimondii] gi|763788731|gb|KJB55727.1| hypothetical
           protein B456_009G091800 [Gossypium raimondii]
           gi|763788733|gb|KJB55729.1| hypothetical protein
           B456_009G091800 [Gossypium raimondii]
           gi|763788734|gb|KJB55730.1| hypothetical protein
           B456_009G091800 [Gossypium raimondii]
          Length = 94

 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 40/54 (74%), Positives = 42/54 (77%)
 Frame = -3

Query: 389 DPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
           DPKTQRPKGFGFVTFE+E EAQ ALK+MNGRIV GRLIFVE A       DA S
Sbjct: 41  DPKTQRPKGFGFVTFETEAEAQKALKAMNGRIVRGRLIFVEYANDKSQKTDADS 94


>ref|XP_008457543.1| PREDICTED: cold-inducible RNA-binding protein B [Cucumis melo]
          Length = 95

 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 39/54 (72%), Positives = 46/54 (85%)
 Frame = -3

Query: 389 DPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
           DP+TQRPKGFGFVTF+S VEA+ AL++M+GRIV GRLIFVE AKT + G D TS
Sbjct: 41  DPETQRPKGFGFVTFQSPVEAKKALQAMDGRIVDGRLIFVEFAKTRKHGVDPTS 94


>ref|XP_012854980.1| PREDICTED: cold-inducible RNA-binding protein-like [Erythranthe
           guttatus]
          Length = 98

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 40/54 (74%), Positives = 46/54 (85%)
 Frame = -3

Query: 389 DPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
           DP+TQRPKGFGFV F SE++AQNALKSMN RIV GRLIFVE AK+T+  D+ TS
Sbjct: 46  DPRTQRPKGFGFVKFSSEIDAQNALKSMNCRIVDGRLIFVEFAKSTKL-DNTTS 98


>ref|XP_009358339.1| PREDICTED: cold-inducible RNA-binding protein-like [Pyrus x
           bretschneideri]
          Length = 94

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 37/56 (66%), Positives = 47/56 (83%)
 Frame = -3

Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
           ++D +T RPKGFGFVT++S+VEAQ ALK+MNGR+V GRLIFVEVA+T R  +D  S
Sbjct: 39  IMDRRTDRPKGFGFVTYQSDVEAQKALKAMNGRMVDGRLIFVEVAQTGRHENDTYS 94


>gb|KHG10601.1| Cold-inducible RNA-binding [Gossypium arboreum]
          Length = 94

 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 39/54 (72%), Positives = 41/54 (75%)
 Frame = -3

Query: 389 DPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
           D KTQRPKGFGFVTFE+E EAQ ALK+MNGRIV GRLIFVE A       DA S
Sbjct: 41  DSKTQRPKGFGFVTFETEAEAQKALKAMNGRIVRGRLIFVEYANDKSQKTDADS 94


>ref|XP_011000290.1| PREDICTED: polyadenylate-binding protein 3 [Populus euphratica]
          Length = 166

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 37/48 (77%), Positives = 41/48 (85%)
 Frame = -3

Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTT 252
           V++ KT RPKGFGFVTFESE +A  ALK+MNGRIV GRLIFVEVAK T
Sbjct: 117 VVESKTLRPKGFGFVTFESEADAHKALKAMNGRIVNGRLIFVEVAKDT 164


>ref|XP_002299889.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222847147|gb|EEE84694.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 88

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 37/48 (77%), Positives = 41/48 (85%)
 Frame = -3

Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTT 252
           V++ KT RPKGFGFVTFESE +A  ALK+MNGRIV GRLIFVEVAK T
Sbjct: 39  VVESKTLRPKGFGFVTFESEADAHKALKAMNGRIVNGRLIFVEVAKDT 86


>ref|XP_006369511.1| hypothetical protein POPTR_0001s24300g [Populus trichocarpa]
           gi|550348074|gb|ERP66080.1| hypothetical protein
           POPTR_0001s24300g [Populus trichocarpa]
          Length = 119

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 37/48 (77%), Positives = 41/48 (85%)
 Frame = -3

Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTT 252
           V++ KT RPKGFGFVTFESE +A  ALK+MNGRIV GRLIFVEVAK T
Sbjct: 70  VVESKTLRPKGFGFVTFESEADAHKALKAMNGRIVNGRLIFVEVAKDT 117


>ref|XP_008357602.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
           [Malus domestica]
          Length = 94

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 36/56 (64%), Positives = 47/56 (83%)
 Frame = -3

Query: 395 VIDPKTQRPKGFGFVTFESEVEAQNALKSMNGRIVAGRLIFVEVAKTTRPGDDATS 228
           ++D +T RPKGFGFVT++S+VEAQ ALK+M+GR+V GRLIFVEVA+T R  +D  S
Sbjct: 39  IMDRRTDRPKGFGFVTYQSDVEAQKALKAMDGRMVDGRLIFVEVAQTGRHENDTYS 94


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