BLASTX nr result

ID: Cornus23_contig00011175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00011175
         (372 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004244090.1| PREDICTED: grpE protein homolog, mitochondri...    66   1e-08
ref|XP_006346189.1| PREDICTED: grpE protein homolog, mitochondri...    64   3e-08
ref|XP_009795857.1| PREDICTED: grpE protein homolog, mitochondri...    59   1e-06
ref|XP_009795856.1| PREDICTED: grpE protein homolog, mitochondri...    59   1e-06
ref|XP_009795855.1| PREDICTED: grpE protein homolog, mitochondri...    59   1e-06
ref|XP_004251913.1| PREDICTED: grpE protein homolog, mitochondri...    59   2e-06
ref|XP_009589167.1| PREDICTED: grpE protein homolog, mitochondri...    56   9e-06
ref|XP_009589166.1| PREDICTED: grpE protein homolog, mitochondri...    56   9e-06

>ref|XP_004244090.1| PREDICTED: grpE protein homolog, mitochondrial [Solanum
           lycopersicum]
          Length = 299

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 31/51 (60%), Positives = 36/51 (70%)
 Frame = -2

Query: 182 MASSRFSSRLPKGVLAQCRNSLLLYARQQHHHHLPISSNQFHSLRESQNKV 30
           M  SR SSR  + VL QCRNSLLLY RQ   HH+PI S+QFHS+R  + KV
Sbjct: 1   MVLSRISSRFSRNVLTQCRNSLLLYYRQNQQHHVPILSSQFHSIRNIREKV 51


>ref|XP_006346189.1| PREDICTED: grpE protein homolog, mitochondrial-like [Solanum
           tuberosum]
          Length = 295

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 31/51 (60%), Positives = 35/51 (68%)
 Frame = -2

Query: 182 MASSRFSSRLPKGVLAQCRNSLLLYARQQHHHHLPISSNQFHSLRESQNKV 30
           M  SR SSR  + +L QCRNSLLLY RQ   HHLPI S QFHS+R  + KV
Sbjct: 1   MVLSRISSRFSRNMLTQCRNSLLLYYRQNQQHHLPILSCQFHSIRNIREKV 51


>ref|XP_009795857.1| PREDICTED: grpE protein homolog, mitochondrial-like isoform X3
           [Nicotiana sylvestris]
          Length = 302

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
 Frame = -2

Query: 182 MASSRFSSRLPKGVLAQCRNSLLLYAR-QQHHHHLPISSNQFHSLRESQNKV 30
           M  SR SSR P+ +L QCR+S+LLY+R QQ   H+P+ ++QFHSLR+ + KV
Sbjct: 1   MLVSRISSRFPRAILNQCRSSVLLYSREQQRKQHVPVLASQFHSLRDFKEKV 52


>ref|XP_009795856.1| PREDICTED: grpE protein homolog, mitochondrial-like isoform X2
           [Nicotiana sylvestris]
          Length = 304

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
 Frame = -2

Query: 182 MASSRFSSRLPKGVLAQCRNSLLLYAR-QQHHHHLPISSNQFHSLRESQNKV 30
           M  SR SSR P+ +L QCR+S+LLY+R QQ   H+P+ ++QFHSLR+ + KV
Sbjct: 1   MLVSRISSRFPRAILNQCRSSVLLYSREQQRKQHVPVLASQFHSLRDFKEKV 52


>ref|XP_009795855.1| PREDICTED: grpE protein homolog, mitochondrial-like isoform X1
           [Nicotiana sylvestris]
          Length = 337

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
 Frame = -2

Query: 182 MASSRFSSRLPKGVLAQCRNSLLLYAR-QQHHHHLPISSNQFHSLRESQNKV 30
           M  SR SSR P+ +L QCR+S+LLY+R QQ   H+P+ ++QFHSLR+ + KV
Sbjct: 1   MLVSRISSRFPRAILNQCRSSVLLYSREQQRKQHVPVLASQFHSLRDFKEKV 52


>ref|XP_004251913.1| PREDICTED: grpE protein homolog, mitochondrial [Solanum
           lycopersicum]
          Length = 335

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
 Frame = -2

Query: 182 MASSRFSSRLPKGVLAQCRNSLLLYAR-QQHHHHLPISSNQFHSLRESQNKVVV 24
           M   R SSR PK ++AQCR+SLLLY+R QQ   ++PI +++FHS RE + KV +
Sbjct: 1   MLVGRISSRFPKSIVAQCRSSLLLYSREQQQQQYVPIFASEFHSFREFKEKVTL 54


>ref|XP_009589167.1| PREDICTED: grpE protein homolog, mitochondrial-like isoform X2
           [Nicotiana tomentosiformis]
          Length = 302

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
 Frame = -2

Query: 182 MASSRFSSRLPKGVLAQCRNSLLLYAR-QQHHHHLPISSNQFHSLRESQNKV 30
           M  SR SSR  + +L QCR+S+LLY+R QQ   H+P+ ++QFHSLR+ + KV
Sbjct: 1   MLVSRISSRFRRAILNQCRSSVLLYSREQQRQQHVPVLASQFHSLRDFKEKV 52


>ref|XP_009589166.1| PREDICTED: grpE protein homolog, mitochondrial-like isoform X1
           [Nicotiana tomentosiformis]
          Length = 304

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
 Frame = -2

Query: 182 MASSRFSSRLPKGVLAQCRNSLLLYAR-QQHHHHLPISSNQFHSLRESQNKV 30
           M  SR SSR  + +L QCR+S+LLY+R QQ   H+P+ ++QFHSLR+ + KV
Sbjct: 1   MLVSRISSRFRRAILNQCRSSVLLYSREQQRQQHVPVLASQFHSLRDFKEKV 52


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