BLASTX nr result
ID: Cornus23_contig00010663
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cornus23_contig00010663 (932 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC ... 142 4e-48 ref|XP_011081725.1| PREDICTED: RNA polymerase sigma factor sigC ... 142 4e-48 gb|AKC88685.1| sigma factor [Francoa sonchifolia] 135 2e-45 ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC ... 125 1e-44 gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas] 125 1e-44 ref|XP_009367413.1| PREDICTED: RNA polymerase sigma factor sigC-... 131 1e-44 ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [... 126 6e-44 ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun... 129 7e-44 ref|XP_008220144.1| PREDICTED: RNA polymerase sigma factor sigC-... 127 1e-43 ref|XP_008220143.1| PREDICTED: RNA polymerase sigma factor sigC-... 127 1e-43 ref|XP_008365120.1| PREDICTED: RNA polymerase sigma factor sigC-... 127 4e-43 ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The... 123 7e-43 gb|KHG01096.1| RNA polymerase sigma factor rpoD [Gossypium arbor... 125 2e-42 emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] 120 4e-42 ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC ... 120 4e-42 ref|XP_010244378.1| PREDICTED: RNA polymerase sigma factor sigC ... 129 6e-42 ref|XP_012450461.1| PREDICTED: RNA polymerase sigma factor sigC-... 123 8e-42 ref|XP_012450463.1| PREDICTED: RNA polymerase sigma factor sigC-... 123 8e-42 ref|XP_012450464.1| PREDICTED: RNA polymerase sigma factor sigC-... 123 8e-42 ref|XP_012450465.1| PREDICTED: RNA polymerase sigma factor sigC-... 123 8e-42 >ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Sesamum indicum] Length = 556 Score = 142 bits (357), Expect(2) = 4e-48 Identities = 65/93 (69%), Positives = 80/93 (86%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 E+ PDTSI++PEETV RQHM+ D+H LL GL+PRE++VL+LRFGL + CKSLEEIGR F Sbjct: 463 EIAPDTSILSPEETVIRQHMINDVHRLLNGLEPREKQVLILRFGLGNRQCKSLEEIGRLF 522 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYLYL 502 CVSKEWIRKIER ALAKLR+E++ LSHY+Y+ Sbjct: 523 CVSKEWIRKIERAALAKLRNEDSLKILSHYVYM 555 Score = 78.6 bits (192), Expect(2) = 4e-48 Identities = 37/49 (75%), Positives = 44/49 (89%) Frame = -1 Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 TLSK INQ+Q+ARK L+ S+GKYPDD +IAK+TGLS+AKI SASKCLRV Sbjct: 397 TLSKVINQVQRARKALSTSNGKYPDDSDIAKYTGLSIAKIMSASKCLRV 445 >ref|XP_011081725.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Sesamum indicum] Length = 388 Score = 142 bits (357), Expect(2) = 4e-48 Identities = 65/93 (69%), Positives = 80/93 (86%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 E+ PDTSI++PEETV RQHM+ D+H LL GL+PRE++VL+LRFGL + CKSLEEIGR F Sbjct: 295 EIAPDTSILSPEETVIRQHMINDVHRLLNGLEPREKQVLILRFGLGNRQCKSLEEIGRLF 354 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYLYL 502 CVSKEWIRKIER ALAKLR+E++ LSHY+Y+ Sbjct: 355 CVSKEWIRKIERAALAKLRNEDSLKILSHYVYM 387 Score = 78.6 bits (192), Expect(2) = 4e-48 Identities = 37/49 (75%), Positives = 44/49 (89%) Frame = -1 Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 TLSK INQ+Q+ARK L+ S+GKYPDD +IAK+TGLS+AKI SASKCLRV Sbjct: 229 TLSKVINQVQRARKALSTSNGKYPDDSDIAKYTGLSIAKIMSASKCLRV 277 >gb|AKC88685.1| sigma factor [Francoa sonchifolia] Length = 540 Score = 135 bits (340), Expect(2) = 2e-45 Identities = 64/91 (70%), Positives = 76/91 (83%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 ELTPD SI PEETV RQHM+KD++N L+GLD RE +VL+LR+GL +HH KSLEEIGR F Sbjct: 446 ELTPDISIPCPEETVIRQHMIKDLYNHLQGLDQREMQVLILRYGLNNHHPKSLEEIGRLF 505 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508 CVSKEWIR++E+KAL LR EETR +L HYL Sbjct: 506 CVSKEWIRRVEKKALTNLRKEETRRSLIHYL 536 Score = 75.9 bits (185), Expect(2) = 2e-45 Identities = 36/50 (72%), Positives = 42/50 (84%) Frame = -1 Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 +TLS+ IN++QKARK L+ SHGKYPDD EIAK TG+SL KI SA KCLRV Sbjct: 379 YTLSRVINRVQKARKALSNSHGKYPDDAEIAKATGISLEKIRSAKKCLRV 428 >ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC [Jatropha curcas] Length = 606 Score = 125 bits (314), Expect(2) = 1e-44 Identities = 58/93 (62%), Positives = 76/93 (81%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 E DT+I +PEE V RQHM+KD+H+LLRGLD RER+VL+LR+GL+DH KSLEEIGR F Sbjct: 514 EFIHDTTIKSPEEAVMRQHMIKDMHDLLRGLDTRERQVLILRYGLKDHQPKSLEEIGRVF 573 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYLYL 502 VSKEW+R++E+K + +LR+EET NL +Y+ L Sbjct: 574 HVSKEWVRRLEKKVMTRLRNEETCRNLRYYVNL 606 Score = 83.2 bits (204), Expect(2) = 1e-44 Identities = 40/49 (81%), Positives = 46/49 (93%) Frame = -1 Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 TLS+AINQIQKARK L+ SHGKYPDD++IA+FTGLSLAKI SAS+CLRV Sbjct: 448 TLSRAINQIQKARKNLSASHGKYPDDEDIAEFTGLSLAKIESASRCLRV 496 >gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas] Length = 564 Score = 125 bits (314), Expect(2) = 1e-44 Identities = 58/93 (62%), Positives = 76/93 (81%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 E DT+I +PEE V RQHM+KD+H+LLRGLD RER+VL+LR+GL+DH KSLEEIGR F Sbjct: 472 EFIHDTTIKSPEEAVMRQHMIKDMHDLLRGLDTRERQVLILRYGLKDHQPKSLEEIGRVF 531 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYLYL 502 VSKEW+R++E+K + +LR+EET NL +Y+ L Sbjct: 532 HVSKEWVRRLEKKVMTRLRNEETCRNLRYYVNL 564 Score = 83.2 bits (204), Expect(2) = 1e-44 Identities = 40/49 (81%), Positives = 46/49 (93%) Frame = -1 Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 TLS+AINQIQKARK L+ SHGKYPDD++IA+FTGLSLAKI SAS+CLRV Sbjct: 406 TLSRAINQIQKARKNLSASHGKYPDDEDIAEFTGLSLAKIESASRCLRV 454 >ref|XP_009367413.1| PREDICTED: RNA polymerase sigma factor sigC-like [Pyrus x bretschneideri] Length = 556 Score = 131 bits (330), Expect(2) = 1e-44 Identities = 65/91 (71%), Positives = 78/91 (85%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 E TPDTSI +PEETVTRQHM KDIH+LL+ L+ +ER+VLVLR+GL ++ KSLEEIG+ F Sbjct: 464 ESTPDTSIKSPEETVTRQHMKKDIHDLLKCLNSKERQVLVLRYGLNNYDPKSLEEIGKLF 523 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508 VSKEWIRKIE+KAL KLRD+ET +LSHYL Sbjct: 524 DVSKEWIRKIEKKALTKLRDDETHRSLSHYL 554 Score = 77.0 bits (188), Expect(2) = 1e-44 Identities = 39/50 (78%), Positives = 41/50 (82%) Frame = -1 Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 FTLSKAINQIQKARK SH +YPDDDEIAK TGLSL +I SAS CLRV Sbjct: 397 FTLSKAINQIQKARKATYNSHMRYPDDDEIAKITGLSLVRIRSASTCLRV 446 >ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis] gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis] Length = 560 Score = 126 bits (316), Expect(2) = 6e-44 Identities = 57/91 (62%), Positives = 74/91 (81%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 E PDTS+ +PEE V RQHM++D+HNLLR LD RER+VL+LRFGL D+ KSLEEIGR F Sbjct: 468 EFLPDTSVQSPEEVVMRQHMIQDMHNLLRSLDSRERQVLILRFGLNDYQPKSLEEIGRHF 527 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508 VSKEW+R++E++ + +LR+EET NL HY+ Sbjct: 528 HVSKEWVRRLEKRVMTRLRNEETCRNLRHYI 558 Score = 80.1 bits (196), Expect(2) = 6e-44 Identities = 40/49 (81%), Positives = 44/49 (89%) Frame = -1 Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 TLS+AI QIQKARK L S+GKYPDDDEIAK+TGLSLAKI SAS+CLRV Sbjct: 402 TLSRAIYQIQKARKALTTSNGKYPDDDEIAKYTGLSLAKIESASRCLRV 450 >ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica] gi|462419859|gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica] Length = 555 Score = 129 bits (323), Expect(2) = 7e-44 Identities = 65/91 (71%), Positives = 76/91 (83%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 E TPDTS+ +PEETV RQHM KDIH+LL+GL+ RER+VLVLR+GL ++ KSLEEIGR F Sbjct: 463 EFTPDTSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLF 522 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508 VSKEWIRKIE+KAL KLR EE+ LSHYL Sbjct: 523 HVSKEWIRKIEKKALMKLRVEESHKYLSHYL 553 Score = 77.4 bits (189), Expect(2) = 7e-44 Identities = 40/50 (80%), Positives = 42/50 (84%) Frame = -1 Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 FTLSKAINQIQKARK SH KYPDD+EIAK TGLSLA+I SAS CLRV Sbjct: 396 FTLSKAINQIQKARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRV 445 >ref|XP_008220144.1| PREDICTED: RNA polymerase sigma factor sigC-like [Prunus mume] Length = 553 Score = 127 bits (320), Expect(2) = 1e-43 Identities = 64/91 (70%), Positives = 76/91 (83%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 E TPDTS+ +PEETV RQHM KDIH+LL+GL+ RER+VLVLR+GL ++ KSLEEIGR F Sbjct: 461 EFTPDTSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLF 520 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508 VSKEWIRKIE+KAL KL+ EE+ LSHYL Sbjct: 521 HVSKEWIRKIEKKALMKLKVEESHKYLSHYL 551 Score = 77.4 bits (189), Expect(2) = 1e-43 Identities = 40/50 (80%), Positives = 42/50 (84%) Frame = -1 Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 FTLSKAINQIQKARK SH KYPDD+EIAK TGLSLA+I SAS CLRV Sbjct: 394 FTLSKAINQIQKARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRV 443 >ref|XP_008220143.1| PREDICTED: RNA polymerase sigma factor sigC-like [Prunus mume] Length = 175 Score = 127 bits (320), Expect(2) = 1e-43 Identities = 64/91 (70%), Positives = 76/91 (83%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 E TPDTS+ +PEETV RQHM KDIH+LL+GL+ RER+VLVLR+GL ++ KSLEEIGR F Sbjct: 83 EFTPDTSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLF 142 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508 VSKEWIRKIE+KAL KL+ EE+ LSHYL Sbjct: 143 HVSKEWIRKIEKKALMKLKVEESHKYLSHYL 173 Score = 77.4 bits (189), Expect(2) = 1e-43 Identities = 40/50 (80%), Positives = 42/50 (84%) Frame = -1 Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 FTLSKAINQIQKARK SH KYPDD+EIAK TGLSLA+I SAS CLRV Sbjct: 16 FTLSKAINQIQKARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRV 65 >ref|XP_008365120.1| PREDICTED: RNA polymerase sigma factor sigC-like [Malus domestica] Length = 559 Score = 127 bits (318), Expect(2) = 4e-43 Identities = 63/91 (69%), Positives = 76/91 (83%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 E T D SI +PEETVTRQHM KDIH+LL+ L+ +ER+VLVLR+GL ++ KSLEEIG+ F Sbjct: 466 EFTADKSIKSPEETVTRQHMKKDIHDLLKCLNSKERQVLVLRYGLNNYDPKSLEEIGKLF 525 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508 VSKEWIRKIE+KAL KLRD+ET +LSHYL Sbjct: 526 DVSKEWIRKIEKKALTKLRDDETHRSLSHYL 556 Score = 76.6 bits (187), Expect(2) = 4e-43 Identities = 40/50 (80%), Positives = 41/50 (82%) Frame = -1 Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 FTLSKAINQIQKARK S KYPDDDEIAK TGLSLA+I SAS CLRV Sbjct: 399 FTLSKAINQIQKARKATYNSQMKYPDDDEIAKITGLSLARIKSASTCLRV 448 >ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao] gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao] Length = 848 Score = 123 bits (309), Expect(2) = 7e-43 Identities = 61/91 (67%), Positives = 73/91 (80%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 E PD S+ +PE+TV RQHM +DIH+LL GLD RER+V+VLR+GL+ KSLEEIGR F Sbjct: 756 EFIPDLSVRSPEKTVMRQHMKEDIHDLLNGLDARERQVMVLRYGLKGSPPKSLEEIGRLF 815 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508 VSKEWIR+IE KA+ KLRD+ET NLSHYL Sbjct: 816 HVSKEWIRRIEMKAMKKLRDKETCRNLSHYL 846 Score = 79.3 bits (194), Expect(2) = 7e-43 Identities = 39/49 (79%), Positives = 44/49 (89%) Frame = -1 Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 TLS+AI QIQKARK L+ SHGKYPD+D IAKFTGLSLAKI SA+KC+RV Sbjct: 690 TLSRAIVQIQKARKALSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRV 738 >gb|KHG01096.1| RNA polymerase sigma factor rpoD [Gossypium arboreum] Length = 556 Score = 125 bits (314), Expect(2) = 2e-42 Identities = 62/91 (68%), Positives = 74/91 (81%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 E PD SI +PE+TV RQHM +DI++LL GL+ RER+V+VLR+GL KSLEEIGR F Sbjct: 464 EFIPDASICSPEKTVMRQHMKEDINDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLF 523 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508 CVSKEWIR+IE KA+AKLRD+ET NLSHYL Sbjct: 524 CVSKEWIRRIEMKAMAKLRDKETCRNLSHYL 554 Score = 75.9 bits (185), Expect(2) = 2e-42 Identities = 37/49 (75%), Positives = 43/49 (87%) Frame = -1 Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 TLS+AI QIQKARK L+ SHGKYP++DEIAK TGLSL+KI SA+KC RV Sbjct: 398 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRV 446 >emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] Length = 611 Score = 120 bits (301), Expect(2) = 4e-42 Identities = 60/91 (65%), Positives = 70/91 (76%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 E TPDTSI +PEE +Q KDIHNLL+GLDPRER++LVLR+G + KSLEEIGR F Sbjct: 519 EFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRF 578 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508 VSKEWIRK+E+ ALA LRDEE NL HY+ Sbjct: 579 NVSKEWIRKLEKTALANLRDEEICQNLRHYV 609 Score = 79.7 bits (195), Expect(2) = 4e-42 Identities = 39/50 (78%), Positives = 43/50 (86%) Frame = -1 Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 FTL++AI QIQKARK L SHG+YPDD+EIAKFTGLSLAKI SA CLRV Sbjct: 452 FTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRV 501 >ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC [Vitis vinifera] gi|296081598|emb|CBI20603.3| unnamed protein product [Vitis vinifera] Length = 561 Score = 120 bits (301), Expect(2) = 4e-42 Identities = 60/91 (65%), Positives = 70/91 (76%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 E TPDTSI +PEE +Q KDIHNLL+GLDPRER++LVLR+G + KSLEEIGR F Sbjct: 469 EFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRF 528 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508 VSKEWIRK+E+ ALA LRDEE NL HY+ Sbjct: 529 NVSKEWIRKLEKTALANLRDEEICQNLRHYV 559 Score = 79.7 bits (195), Expect(2) = 4e-42 Identities = 39/50 (78%), Positives = 43/50 (86%) Frame = -1 Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 FTL++AI QIQKARK L SHG+YPDD+EIAKFTGLSLAKI SA CLRV Sbjct: 402 FTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRV 451 >ref|XP_010244378.1| PREDICTED: RNA polymerase sigma factor sigC [Nelumbo nucifera] gi|720088207|ref|XP_010244379.1| PREDICTED: RNA polymerase sigma factor sigC [Nelumbo nucifera] Length = 558 Score = 129 bits (324), Expect(2) = 6e-42 Identities = 63/93 (67%), Positives = 74/93 (79%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 E PDTSI TPE+ V RQHM KDIH LL+GL PRER+VLVLR+GL D C+SLEEIGR F Sbjct: 466 EFMPDTSIKTPEDIVMRQHMRKDIHKLLQGLHPRERKVLVLRYGLCDGRCRSLEEIGRLF 525 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYLYL 502 V+KEWIRKIE+ A+ K+R EE + NLS YL+L Sbjct: 526 NVTKEWIRKIEKAAMTKVRTEEVQRNLSEYLHL 558 Score = 70.5 bits (171), Expect(2) = 6e-42 Identities = 33/49 (67%), Positives = 40/49 (81%) Frame = -1 Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 TLS+AINQI K RK+ +HG+YPDDDEI+K TGLS+AK+ A KCLRV Sbjct: 400 TLSRAINQIHKTRKSFFNTHGRYPDDDEISKCTGLSVAKVRLAGKCLRV 448 >ref|XP_012450461.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X1 [Gossypium raimondii] gi|823235651|ref|XP_012450462.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X1 [Gossypium raimondii] gi|763798661|gb|KJB65616.1| hypothetical protein B456_010G103500 [Gossypium raimondii] Length = 578 Score = 123 bits (309), Expect(2) = 8e-42 Identities = 62/91 (68%), Positives = 73/91 (80%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 E PD SI +PE+TV RQHM +DIH+LL GL+ RER+V+VLR+GL KSLEEIGR F Sbjct: 486 EFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLF 545 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508 VSKEWIR+IE KA+AKLRD+ET NLSHYL Sbjct: 546 RVSKEWIRRIEMKAMAKLRDKETCRNLSHYL 576 Score = 75.9 bits (185), Expect(2) = 8e-42 Identities = 37/49 (75%), Positives = 43/49 (87%) Frame = -1 Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 TLS+AI QIQKARK L+ SHGKYP++DEIAK TGLSL+KI SA+KC RV Sbjct: 420 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRV 468 >ref|XP_012450463.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X2 [Gossypium raimondii] Length = 577 Score = 123 bits (309), Expect(2) = 8e-42 Identities = 62/91 (68%), Positives = 73/91 (80%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 E PD SI +PE+TV RQHM +DIH+LL GL+ RER+V+VLR+GL KSLEEIGR F Sbjct: 485 EFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLF 544 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508 VSKEWIR+IE KA+AKLRD+ET NLSHYL Sbjct: 545 RVSKEWIRRIEMKAMAKLRDKETCRNLSHYL 575 Score = 75.9 bits (185), Expect(2) = 8e-42 Identities = 37/49 (75%), Positives = 43/49 (87%) Frame = -1 Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 TLS+AI QIQKARK L+ SHGKYP++DEIAK TGLSL+KI SA+KC RV Sbjct: 419 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRV 467 >ref|XP_012450464.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X3 [Gossypium raimondii] Length = 576 Score = 123 bits (309), Expect(2) = 8e-42 Identities = 62/91 (68%), Positives = 73/91 (80%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 E PD SI +PE+TV RQHM +DIH+LL GL+ RER+V+VLR+GL KSLEEIGR F Sbjct: 484 EFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLF 543 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508 VSKEWIR+IE KA+AKLRD+ET NLSHYL Sbjct: 544 RVSKEWIRRIEMKAMAKLRDKETCRNLSHYL 574 Score = 75.9 bits (185), Expect(2) = 8e-42 Identities = 37/49 (75%), Positives = 43/49 (87%) Frame = -1 Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 TLS+AI QIQKARK L+ SHGKYP++DEIAK TGLSL+KI SA+KC RV Sbjct: 418 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRV 466 >ref|XP_012450465.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X4 [Gossypium raimondii] gi|763798660|gb|KJB65615.1| hypothetical protein B456_010G103500 [Gossypium raimondii] Length = 565 Score = 123 bits (309), Expect(2) = 8e-42 Identities = 62/91 (68%), Positives = 73/91 (80%) Frame = -3 Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601 E PD SI +PE+TV RQHM +DIH+LL GL+ RER+V+VLR+GL KSLEEIGR F Sbjct: 473 EFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLF 532 Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508 VSKEWIR+IE KA+AKLRD+ET NLSHYL Sbjct: 533 RVSKEWIRRIEMKAMAKLRDKETCRNLSHYL 563 Score = 75.9 bits (185), Expect(2) = 8e-42 Identities = 37/49 (75%), Positives = 43/49 (87%) Frame = -1 Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783 TLS+AI QIQKARK L+ SHGKYP++DEIAK TGLSL+KI SA+KC RV Sbjct: 407 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRV 455