BLASTX nr result
ID: Cornus23_contig00010663
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00010663
(932 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC ... 142 4e-48
ref|XP_011081725.1| PREDICTED: RNA polymerase sigma factor sigC ... 142 4e-48
gb|AKC88685.1| sigma factor [Francoa sonchifolia] 135 2e-45
ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC ... 125 1e-44
gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas] 125 1e-44
ref|XP_009367413.1| PREDICTED: RNA polymerase sigma factor sigC-... 131 1e-44
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [... 126 6e-44
ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun... 129 7e-44
ref|XP_008220144.1| PREDICTED: RNA polymerase sigma factor sigC-... 127 1e-43
ref|XP_008220143.1| PREDICTED: RNA polymerase sigma factor sigC-... 127 1e-43
ref|XP_008365120.1| PREDICTED: RNA polymerase sigma factor sigC-... 127 4e-43
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The... 123 7e-43
gb|KHG01096.1| RNA polymerase sigma factor rpoD [Gossypium arbor... 125 2e-42
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] 120 4e-42
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC ... 120 4e-42
ref|XP_010244378.1| PREDICTED: RNA polymerase sigma factor sigC ... 129 6e-42
ref|XP_012450461.1| PREDICTED: RNA polymerase sigma factor sigC-... 123 8e-42
ref|XP_012450463.1| PREDICTED: RNA polymerase sigma factor sigC-... 123 8e-42
ref|XP_012450464.1| PREDICTED: RNA polymerase sigma factor sigC-... 123 8e-42
ref|XP_012450465.1| PREDICTED: RNA polymerase sigma factor sigC-... 123 8e-42
>ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Sesamum
indicum]
Length = 556
Score = 142 bits (357), Expect(2) = 4e-48
Identities = 65/93 (69%), Positives = 80/93 (86%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
E+ PDTSI++PEETV RQHM+ D+H LL GL+PRE++VL+LRFGL + CKSLEEIGR F
Sbjct: 463 EIAPDTSILSPEETVIRQHMINDVHRLLNGLEPREKQVLILRFGLGNRQCKSLEEIGRLF 522
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYLYL 502
CVSKEWIRKIER ALAKLR+E++ LSHY+Y+
Sbjct: 523 CVSKEWIRKIERAALAKLRNEDSLKILSHYVYM 555
Score = 78.6 bits (192), Expect(2) = 4e-48
Identities = 37/49 (75%), Positives = 44/49 (89%)
Frame = -1
Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
TLSK INQ+Q+ARK L+ S+GKYPDD +IAK+TGLS+AKI SASKCLRV
Sbjct: 397 TLSKVINQVQRARKALSTSNGKYPDDSDIAKYTGLSIAKIMSASKCLRV 445
>ref|XP_011081725.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Sesamum
indicum]
Length = 388
Score = 142 bits (357), Expect(2) = 4e-48
Identities = 65/93 (69%), Positives = 80/93 (86%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
E+ PDTSI++PEETV RQHM+ D+H LL GL+PRE++VL+LRFGL + CKSLEEIGR F
Sbjct: 295 EIAPDTSILSPEETVIRQHMINDVHRLLNGLEPREKQVLILRFGLGNRQCKSLEEIGRLF 354
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYLYL 502
CVSKEWIRKIER ALAKLR+E++ LSHY+Y+
Sbjct: 355 CVSKEWIRKIERAALAKLRNEDSLKILSHYVYM 387
Score = 78.6 bits (192), Expect(2) = 4e-48
Identities = 37/49 (75%), Positives = 44/49 (89%)
Frame = -1
Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
TLSK INQ+Q+ARK L+ S+GKYPDD +IAK+TGLS+AKI SASKCLRV
Sbjct: 229 TLSKVINQVQRARKALSTSNGKYPDDSDIAKYTGLSIAKIMSASKCLRV 277
>gb|AKC88685.1| sigma factor [Francoa sonchifolia]
Length = 540
Score = 135 bits (340), Expect(2) = 2e-45
Identities = 64/91 (70%), Positives = 76/91 (83%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
ELTPD SI PEETV RQHM+KD++N L+GLD RE +VL+LR+GL +HH KSLEEIGR F
Sbjct: 446 ELTPDISIPCPEETVIRQHMIKDLYNHLQGLDQREMQVLILRYGLNNHHPKSLEEIGRLF 505
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
CVSKEWIR++E+KAL LR EETR +L HYL
Sbjct: 506 CVSKEWIRRVEKKALTNLRKEETRRSLIHYL 536
Score = 75.9 bits (185), Expect(2) = 2e-45
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = -1
Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
+TLS+ IN++QKARK L+ SHGKYPDD EIAK TG+SL KI SA KCLRV
Sbjct: 379 YTLSRVINRVQKARKALSNSHGKYPDDAEIAKATGISLEKIRSAKKCLRV 428
>ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC [Jatropha curcas]
Length = 606
Score = 125 bits (314), Expect(2) = 1e-44
Identities = 58/93 (62%), Positives = 76/93 (81%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
E DT+I +PEE V RQHM+KD+H+LLRGLD RER+VL+LR+GL+DH KSLEEIGR F
Sbjct: 514 EFIHDTTIKSPEEAVMRQHMIKDMHDLLRGLDTRERQVLILRYGLKDHQPKSLEEIGRVF 573
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYLYL 502
VSKEW+R++E+K + +LR+EET NL +Y+ L
Sbjct: 574 HVSKEWVRRLEKKVMTRLRNEETCRNLRYYVNL 606
Score = 83.2 bits (204), Expect(2) = 1e-44
Identities = 40/49 (81%), Positives = 46/49 (93%)
Frame = -1
Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
TLS+AINQIQKARK L+ SHGKYPDD++IA+FTGLSLAKI SAS+CLRV
Sbjct: 448 TLSRAINQIQKARKNLSASHGKYPDDEDIAEFTGLSLAKIESASRCLRV 496
>gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas]
Length = 564
Score = 125 bits (314), Expect(2) = 1e-44
Identities = 58/93 (62%), Positives = 76/93 (81%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
E DT+I +PEE V RQHM+KD+H+LLRGLD RER+VL+LR+GL+DH KSLEEIGR F
Sbjct: 472 EFIHDTTIKSPEEAVMRQHMIKDMHDLLRGLDTRERQVLILRYGLKDHQPKSLEEIGRVF 531
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYLYL 502
VSKEW+R++E+K + +LR+EET NL +Y+ L
Sbjct: 532 HVSKEWVRRLEKKVMTRLRNEETCRNLRYYVNL 564
Score = 83.2 bits (204), Expect(2) = 1e-44
Identities = 40/49 (81%), Positives = 46/49 (93%)
Frame = -1
Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
TLS+AINQIQKARK L+ SHGKYPDD++IA+FTGLSLAKI SAS+CLRV
Sbjct: 406 TLSRAINQIQKARKNLSASHGKYPDDEDIAEFTGLSLAKIESASRCLRV 454
>ref|XP_009367413.1| PREDICTED: RNA polymerase sigma factor sigC-like [Pyrus x
bretschneideri]
Length = 556
Score = 131 bits (330), Expect(2) = 1e-44
Identities = 65/91 (71%), Positives = 78/91 (85%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
E TPDTSI +PEETVTRQHM KDIH+LL+ L+ +ER+VLVLR+GL ++ KSLEEIG+ F
Sbjct: 464 ESTPDTSIKSPEETVTRQHMKKDIHDLLKCLNSKERQVLVLRYGLNNYDPKSLEEIGKLF 523
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
VSKEWIRKIE+KAL KLRD+ET +LSHYL
Sbjct: 524 DVSKEWIRKIEKKALTKLRDDETHRSLSHYL 554
Score = 77.0 bits (188), Expect(2) = 1e-44
Identities = 39/50 (78%), Positives = 41/50 (82%)
Frame = -1
Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
FTLSKAINQIQKARK SH +YPDDDEIAK TGLSL +I SAS CLRV
Sbjct: 397 FTLSKAINQIQKARKATYNSHMRYPDDDEIAKITGLSLVRIRSASTCLRV 446
>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 560
Score = 126 bits (316), Expect(2) = 6e-44
Identities = 57/91 (62%), Positives = 74/91 (81%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
E PDTS+ +PEE V RQHM++D+HNLLR LD RER+VL+LRFGL D+ KSLEEIGR F
Sbjct: 468 EFLPDTSVQSPEEVVMRQHMIQDMHNLLRSLDSRERQVLILRFGLNDYQPKSLEEIGRHF 527
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
VSKEW+R++E++ + +LR+EET NL HY+
Sbjct: 528 HVSKEWVRRLEKRVMTRLRNEETCRNLRHYI 558
Score = 80.1 bits (196), Expect(2) = 6e-44
Identities = 40/49 (81%), Positives = 44/49 (89%)
Frame = -1
Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
TLS+AI QIQKARK L S+GKYPDDDEIAK+TGLSLAKI SAS+CLRV
Sbjct: 402 TLSRAIYQIQKARKALTTSNGKYPDDDEIAKYTGLSLAKIESASRCLRV 450
>ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
gi|462419859|gb|EMJ24122.1| hypothetical protein
PRUPE_ppa003696mg [Prunus persica]
Length = 555
Score = 129 bits (323), Expect(2) = 7e-44
Identities = 65/91 (71%), Positives = 76/91 (83%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
E TPDTS+ +PEETV RQHM KDIH+LL+GL+ RER+VLVLR+GL ++ KSLEEIGR F
Sbjct: 463 EFTPDTSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLF 522
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
VSKEWIRKIE+KAL KLR EE+ LSHYL
Sbjct: 523 HVSKEWIRKIEKKALMKLRVEESHKYLSHYL 553
Score = 77.4 bits (189), Expect(2) = 7e-44
Identities = 40/50 (80%), Positives = 42/50 (84%)
Frame = -1
Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
FTLSKAINQIQKARK SH KYPDD+EIAK TGLSLA+I SAS CLRV
Sbjct: 396 FTLSKAINQIQKARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRV 445
>ref|XP_008220144.1| PREDICTED: RNA polymerase sigma factor sigC-like [Prunus mume]
Length = 553
Score = 127 bits (320), Expect(2) = 1e-43
Identities = 64/91 (70%), Positives = 76/91 (83%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
E TPDTS+ +PEETV RQHM KDIH+LL+GL+ RER+VLVLR+GL ++ KSLEEIGR F
Sbjct: 461 EFTPDTSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLF 520
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
VSKEWIRKIE+KAL KL+ EE+ LSHYL
Sbjct: 521 HVSKEWIRKIEKKALMKLKVEESHKYLSHYL 551
Score = 77.4 bits (189), Expect(2) = 1e-43
Identities = 40/50 (80%), Positives = 42/50 (84%)
Frame = -1
Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
FTLSKAINQIQKARK SH KYPDD+EIAK TGLSLA+I SAS CLRV
Sbjct: 394 FTLSKAINQIQKARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRV 443
>ref|XP_008220143.1| PREDICTED: RNA polymerase sigma factor sigC-like [Prunus mume]
Length = 175
Score = 127 bits (320), Expect(2) = 1e-43
Identities = 64/91 (70%), Positives = 76/91 (83%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
E TPDTS+ +PEETV RQHM KDIH+LL+GL+ RER+VLVLR+GL ++ KSLEEIGR F
Sbjct: 83 EFTPDTSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLF 142
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
VSKEWIRKIE+KAL KL+ EE+ LSHYL
Sbjct: 143 HVSKEWIRKIEKKALMKLKVEESHKYLSHYL 173
Score = 77.4 bits (189), Expect(2) = 1e-43
Identities = 40/50 (80%), Positives = 42/50 (84%)
Frame = -1
Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
FTLSKAINQIQKARK SH KYPDD+EIAK TGLSLA+I SAS CLRV
Sbjct: 16 FTLSKAINQIQKARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRV 65
>ref|XP_008365120.1| PREDICTED: RNA polymerase sigma factor sigC-like [Malus domestica]
Length = 559
Score = 127 bits (318), Expect(2) = 4e-43
Identities = 63/91 (69%), Positives = 76/91 (83%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
E T D SI +PEETVTRQHM KDIH+LL+ L+ +ER+VLVLR+GL ++ KSLEEIG+ F
Sbjct: 466 EFTADKSIKSPEETVTRQHMKKDIHDLLKCLNSKERQVLVLRYGLNNYDPKSLEEIGKLF 525
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
VSKEWIRKIE+KAL KLRD+ET +LSHYL
Sbjct: 526 DVSKEWIRKIEKKALTKLRDDETHRSLSHYL 556
Score = 76.6 bits (187), Expect(2) = 4e-43
Identities = 40/50 (80%), Positives = 41/50 (82%)
Frame = -1
Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
FTLSKAINQIQKARK S KYPDDDEIAK TGLSLA+I SAS CLRV
Sbjct: 399 FTLSKAINQIQKARKATYNSQMKYPDDDEIAKITGLSLARIKSASTCLRV 448
>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
C, putative [Theobroma cacao]
Length = 848
Score = 123 bits (309), Expect(2) = 7e-43
Identities = 61/91 (67%), Positives = 73/91 (80%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
E PD S+ +PE+TV RQHM +DIH+LL GLD RER+V+VLR+GL+ KSLEEIGR F
Sbjct: 756 EFIPDLSVRSPEKTVMRQHMKEDIHDLLNGLDARERQVMVLRYGLKGSPPKSLEEIGRLF 815
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
VSKEWIR+IE KA+ KLRD+ET NLSHYL
Sbjct: 816 HVSKEWIRRIEMKAMKKLRDKETCRNLSHYL 846
Score = 79.3 bits (194), Expect(2) = 7e-43
Identities = 39/49 (79%), Positives = 44/49 (89%)
Frame = -1
Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
TLS+AI QIQKARK L+ SHGKYPD+D IAKFTGLSLAKI SA+KC+RV
Sbjct: 690 TLSRAIVQIQKARKALSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRV 738
>gb|KHG01096.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
Length = 556
Score = 125 bits (314), Expect(2) = 2e-42
Identities = 62/91 (68%), Positives = 74/91 (81%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
E PD SI +PE+TV RQHM +DI++LL GL+ RER+V+VLR+GL KSLEEIGR F
Sbjct: 464 EFIPDASICSPEKTVMRQHMKEDINDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLF 523
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
CVSKEWIR+IE KA+AKLRD+ET NLSHYL
Sbjct: 524 CVSKEWIRRIEMKAMAKLRDKETCRNLSHYL 554
Score = 75.9 bits (185), Expect(2) = 2e-42
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = -1
Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
TLS+AI QIQKARK L+ SHGKYP++DEIAK TGLSL+KI SA+KC RV
Sbjct: 398 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRV 446
>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
Length = 611
Score = 120 bits (301), Expect(2) = 4e-42
Identities = 60/91 (65%), Positives = 70/91 (76%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
E TPDTSI +PEE +Q KDIHNLL+GLDPRER++LVLR+G + KSLEEIGR F
Sbjct: 519 EFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRF 578
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
VSKEWIRK+E+ ALA LRDEE NL HY+
Sbjct: 579 NVSKEWIRKLEKTALANLRDEEICQNLRHYV 609
Score = 79.7 bits (195), Expect(2) = 4e-42
Identities = 39/50 (78%), Positives = 43/50 (86%)
Frame = -1
Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
FTL++AI QIQKARK L SHG+YPDD+EIAKFTGLSLAKI SA CLRV
Sbjct: 452 FTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRV 501
>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC [Vitis vinifera]
gi|296081598|emb|CBI20603.3| unnamed protein product
[Vitis vinifera]
Length = 561
Score = 120 bits (301), Expect(2) = 4e-42
Identities = 60/91 (65%), Positives = 70/91 (76%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
E TPDTSI +PEE +Q KDIHNLL+GLDPRER++LVLR+G + KSLEEIGR F
Sbjct: 469 EFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRF 528
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
VSKEWIRK+E+ ALA LRDEE NL HY+
Sbjct: 529 NVSKEWIRKLEKTALANLRDEEICQNLRHYV 559
Score = 79.7 bits (195), Expect(2) = 4e-42
Identities = 39/50 (78%), Positives = 43/50 (86%)
Frame = -1
Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
FTL++AI QIQKARK L SHG+YPDD+EIAKFTGLSLAKI SA CLRV
Sbjct: 402 FTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRV 451
>ref|XP_010244378.1| PREDICTED: RNA polymerase sigma factor sigC [Nelumbo nucifera]
gi|720088207|ref|XP_010244379.1| PREDICTED: RNA
polymerase sigma factor sigC [Nelumbo nucifera]
Length = 558
Score = 129 bits (324), Expect(2) = 6e-42
Identities = 63/93 (67%), Positives = 74/93 (79%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
E PDTSI TPE+ V RQHM KDIH LL+GL PRER+VLVLR+GL D C+SLEEIGR F
Sbjct: 466 EFMPDTSIKTPEDIVMRQHMRKDIHKLLQGLHPRERKVLVLRYGLCDGRCRSLEEIGRLF 525
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYLYL 502
V+KEWIRKIE+ A+ K+R EE + NLS YL+L
Sbjct: 526 NVTKEWIRKIEKAAMTKVRTEEVQRNLSEYLHL 558
Score = 70.5 bits (171), Expect(2) = 6e-42
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -1
Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
TLS+AINQI K RK+ +HG+YPDDDEI+K TGLS+AK+ A KCLRV
Sbjct: 400 TLSRAINQIHKTRKSFFNTHGRYPDDDEISKCTGLSVAKVRLAGKCLRV 448
>ref|XP_012450461.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X1
[Gossypium raimondii] gi|823235651|ref|XP_012450462.1|
PREDICTED: RNA polymerase sigma factor sigC-like isoform
X1 [Gossypium raimondii] gi|763798661|gb|KJB65616.1|
hypothetical protein B456_010G103500 [Gossypium
raimondii]
Length = 578
Score = 123 bits (309), Expect(2) = 8e-42
Identities = 62/91 (68%), Positives = 73/91 (80%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
E PD SI +PE+TV RQHM +DIH+LL GL+ RER+V+VLR+GL KSLEEIGR F
Sbjct: 486 EFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLF 545
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
VSKEWIR+IE KA+AKLRD+ET NLSHYL
Sbjct: 546 RVSKEWIRRIEMKAMAKLRDKETCRNLSHYL 576
Score = 75.9 bits (185), Expect(2) = 8e-42
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = -1
Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
TLS+AI QIQKARK L+ SHGKYP++DEIAK TGLSL+KI SA+KC RV
Sbjct: 420 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRV 468
>ref|XP_012450463.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X2
[Gossypium raimondii]
Length = 577
Score = 123 bits (309), Expect(2) = 8e-42
Identities = 62/91 (68%), Positives = 73/91 (80%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
E PD SI +PE+TV RQHM +DIH+LL GL+ RER+V+VLR+GL KSLEEIGR F
Sbjct: 485 EFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLF 544
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
VSKEWIR+IE KA+AKLRD+ET NLSHYL
Sbjct: 545 RVSKEWIRRIEMKAMAKLRDKETCRNLSHYL 575
Score = 75.9 bits (185), Expect(2) = 8e-42
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = -1
Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
TLS+AI QIQKARK L+ SHGKYP++DEIAK TGLSL+KI SA+KC RV
Sbjct: 419 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRV 467
>ref|XP_012450464.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X3
[Gossypium raimondii]
Length = 576
Score = 123 bits (309), Expect(2) = 8e-42
Identities = 62/91 (68%), Positives = 73/91 (80%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
E PD SI +PE+TV RQHM +DIH+LL GL+ RER+V+VLR+GL KSLEEIGR F
Sbjct: 484 EFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLF 543
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
VSKEWIR+IE KA+AKLRD+ET NLSHYL
Sbjct: 544 RVSKEWIRRIEMKAMAKLRDKETCRNLSHYL 574
Score = 75.9 bits (185), Expect(2) = 8e-42
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = -1
Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
TLS+AI QIQKARK L+ SHGKYP++DEIAK TGLSL+KI SA+KC RV
Sbjct: 418 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRV 466
>ref|XP_012450465.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X4
[Gossypium raimondii] gi|763798660|gb|KJB65615.1|
hypothetical protein B456_010G103500 [Gossypium
raimondii]
Length = 565
Score = 123 bits (309), Expect(2) = 8e-42
Identities = 62/91 (68%), Positives = 73/91 (80%)
Frame = -3
Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
E PD SI +PE+TV RQHM +DIH+LL GL+ RER+V+VLR+GL KSLEEIGR F
Sbjct: 473 EFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLF 532
Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
VSKEWIR+IE KA+AKLRD+ET NLSHYL
Sbjct: 533 RVSKEWIRRIEMKAMAKLRDKETCRNLSHYL 563
Score = 75.9 bits (185), Expect(2) = 8e-42
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = -1
Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
TLS+AI QIQKARK L+ SHGKYP++DEIAK TGLSL+KI SA+KC RV
Sbjct: 407 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRV 455