BLASTX nr result

ID: Cornus23_contig00010663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00010663
         (932 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC ...   142   4e-48
ref|XP_011081725.1| PREDICTED: RNA polymerase sigma factor sigC ...   142   4e-48
gb|AKC88685.1| sigma factor [Francoa sonchifolia]                     135   2e-45
ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC ...   125   1e-44
gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas]      125   1e-44
ref|XP_009367413.1| PREDICTED: RNA polymerase sigma factor sigC-...   131   1e-44
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...   126   6e-44
ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun...   129   7e-44
ref|XP_008220144.1| PREDICTED: RNA polymerase sigma factor sigC-...   127   1e-43
ref|XP_008220143.1| PREDICTED: RNA polymerase sigma factor sigC-...   127   1e-43
ref|XP_008365120.1| PREDICTED: RNA polymerase sigma factor sigC-...   127   4e-43
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The...   123   7e-43
gb|KHG01096.1| RNA polymerase sigma factor rpoD [Gossypium arbor...   125   2e-42
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   120   4e-42
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC ...   120   4e-42
ref|XP_010244378.1| PREDICTED: RNA polymerase sigma factor sigC ...   129   6e-42
ref|XP_012450461.1| PREDICTED: RNA polymerase sigma factor sigC-...   123   8e-42
ref|XP_012450463.1| PREDICTED: RNA polymerase sigma factor sigC-...   123   8e-42
ref|XP_012450464.1| PREDICTED: RNA polymerase sigma factor sigC-...   123   8e-42
ref|XP_012450465.1| PREDICTED: RNA polymerase sigma factor sigC-...   123   8e-42

>ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Sesamum
           indicum]
          Length = 556

 Score =  142 bits (357), Expect(2) = 4e-48
 Identities = 65/93 (69%), Positives = 80/93 (86%)
 Frame = -3

Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
           E+ PDTSI++PEETV RQHM+ D+H LL GL+PRE++VL+LRFGL +  CKSLEEIGR F
Sbjct: 463 EIAPDTSILSPEETVIRQHMINDVHRLLNGLEPREKQVLILRFGLGNRQCKSLEEIGRLF 522

Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYLYL 502
           CVSKEWIRKIER ALAKLR+E++   LSHY+Y+
Sbjct: 523 CVSKEWIRKIERAALAKLRNEDSLKILSHYVYM 555



 Score = 78.6 bits (192), Expect(2) = 4e-48
 Identities = 37/49 (75%), Positives = 44/49 (89%)
 Frame = -1

Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           TLSK INQ+Q+ARK L+ S+GKYPDD +IAK+TGLS+AKI SASKCLRV
Sbjct: 397 TLSKVINQVQRARKALSTSNGKYPDDSDIAKYTGLSIAKIMSASKCLRV 445


>ref|XP_011081725.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Sesamum
           indicum]
          Length = 388

 Score =  142 bits (357), Expect(2) = 4e-48
 Identities = 65/93 (69%), Positives = 80/93 (86%)
 Frame = -3

Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
           E+ PDTSI++PEETV RQHM+ D+H LL GL+PRE++VL+LRFGL +  CKSLEEIGR F
Sbjct: 295 EIAPDTSILSPEETVIRQHMINDVHRLLNGLEPREKQVLILRFGLGNRQCKSLEEIGRLF 354

Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYLYL 502
           CVSKEWIRKIER ALAKLR+E++   LSHY+Y+
Sbjct: 355 CVSKEWIRKIERAALAKLRNEDSLKILSHYVYM 387



 Score = 78.6 bits (192), Expect(2) = 4e-48
 Identities = 37/49 (75%), Positives = 44/49 (89%)
 Frame = -1

Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           TLSK INQ+Q+ARK L+ S+GKYPDD +IAK+TGLS+AKI SASKCLRV
Sbjct: 229 TLSKVINQVQRARKALSTSNGKYPDDSDIAKYTGLSIAKIMSASKCLRV 277


>gb|AKC88685.1| sigma factor [Francoa sonchifolia]
          Length = 540

 Score =  135 bits (340), Expect(2) = 2e-45
 Identities = 64/91 (70%), Positives = 76/91 (83%)
 Frame = -3

Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
           ELTPD SI  PEETV RQHM+KD++N L+GLD RE +VL+LR+GL +HH KSLEEIGR F
Sbjct: 446 ELTPDISIPCPEETVIRQHMIKDLYNHLQGLDQREMQVLILRYGLNNHHPKSLEEIGRLF 505

Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
           CVSKEWIR++E+KAL  LR EETR +L HYL
Sbjct: 506 CVSKEWIRRVEKKALTNLRKEETRRSLIHYL 536



 Score = 75.9 bits (185), Expect(2) = 2e-45
 Identities = 36/50 (72%), Positives = 42/50 (84%)
 Frame = -1

Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           +TLS+ IN++QKARK L+ SHGKYPDD EIAK TG+SL KI SA KCLRV
Sbjct: 379 YTLSRVINRVQKARKALSNSHGKYPDDAEIAKATGISLEKIRSAKKCLRV 428


>ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC [Jatropha curcas]
          Length = 606

 Score =  125 bits (314), Expect(2) = 1e-44
 Identities = 58/93 (62%), Positives = 76/93 (81%)
 Frame = -3

Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
           E   DT+I +PEE V RQHM+KD+H+LLRGLD RER+VL+LR+GL+DH  KSLEEIGR F
Sbjct: 514 EFIHDTTIKSPEEAVMRQHMIKDMHDLLRGLDTRERQVLILRYGLKDHQPKSLEEIGRVF 573

Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYLYL 502
            VSKEW+R++E+K + +LR+EET  NL +Y+ L
Sbjct: 574 HVSKEWVRRLEKKVMTRLRNEETCRNLRYYVNL 606



 Score = 83.2 bits (204), Expect(2) = 1e-44
 Identities = 40/49 (81%), Positives = 46/49 (93%)
 Frame = -1

Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           TLS+AINQIQKARK L+ SHGKYPDD++IA+FTGLSLAKI SAS+CLRV
Sbjct: 448 TLSRAINQIQKARKNLSASHGKYPDDEDIAEFTGLSLAKIESASRCLRV 496


>gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas]
          Length = 564

 Score =  125 bits (314), Expect(2) = 1e-44
 Identities = 58/93 (62%), Positives = 76/93 (81%)
 Frame = -3

Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
           E   DT+I +PEE V RQHM+KD+H+LLRGLD RER+VL+LR+GL+DH  KSLEEIGR F
Sbjct: 472 EFIHDTTIKSPEEAVMRQHMIKDMHDLLRGLDTRERQVLILRYGLKDHQPKSLEEIGRVF 531

Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYLYL 502
            VSKEW+R++E+K + +LR+EET  NL +Y+ L
Sbjct: 532 HVSKEWVRRLEKKVMTRLRNEETCRNLRYYVNL 564



 Score = 83.2 bits (204), Expect(2) = 1e-44
 Identities = 40/49 (81%), Positives = 46/49 (93%)
 Frame = -1

Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           TLS+AINQIQKARK L+ SHGKYPDD++IA+FTGLSLAKI SAS+CLRV
Sbjct: 406 TLSRAINQIQKARKNLSASHGKYPDDEDIAEFTGLSLAKIESASRCLRV 454


>ref|XP_009367413.1| PREDICTED: RNA polymerase sigma factor sigC-like [Pyrus x
           bretschneideri]
          Length = 556

 Score =  131 bits (330), Expect(2) = 1e-44
 Identities = 65/91 (71%), Positives = 78/91 (85%)
 Frame = -3

Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
           E TPDTSI +PEETVTRQHM KDIH+LL+ L+ +ER+VLVLR+GL ++  KSLEEIG+ F
Sbjct: 464 ESTPDTSIKSPEETVTRQHMKKDIHDLLKCLNSKERQVLVLRYGLNNYDPKSLEEIGKLF 523

Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
            VSKEWIRKIE+KAL KLRD+ET  +LSHYL
Sbjct: 524 DVSKEWIRKIEKKALTKLRDDETHRSLSHYL 554



 Score = 77.0 bits (188), Expect(2) = 1e-44
 Identities = 39/50 (78%), Positives = 41/50 (82%)
 Frame = -1

Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           FTLSKAINQIQKARK    SH +YPDDDEIAK TGLSL +I SAS CLRV
Sbjct: 397 FTLSKAINQIQKARKATYNSHMRYPDDDEIAKITGLSLVRIRSASTCLRV 446


>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 560

 Score =  126 bits (316), Expect(2) = 6e-44
 Identities = 57/91 (62%), Positives = 74/91 (81%)
 Frame = -3

Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
           E  PDTS+ +PEE V RQHM++D+HNLLR LD RER+VL+LRFGL D+  KSLEEIGR F
Sbjct: 468 EFLPDTSVQSPEEVVMRQHMIQDMHNLLRSLDSRERQVLILRFGLNDYQPKSLEEIGRHF 527

Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
            VSKEW+R++E++ + +LR+EET  NL HY+
Sbjct: 528 HVSKEWVRRLEKRVMTRLRNEETCRNLRHYI 558



 Score = 80.1 bits (196), Expect(2) = 6e-44
 Identities = 40/49 (81%), Positives = 44/49 (89%)
 Frame = -1

Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           TLS+AI QIQKARK L  S+GKYPDDDEIAK+TGLSLAKI SAS+CLRV
Sbjct: 402 TLSRAIYQIQKARKALTTSNGKYPDDDEIAKYTGLSLAKIESASRCLRV 450


>ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
           gi|462419859|gb|EMJ24122.1| hypothetical protein
           PRUPE_ppa003696mg [Prunus persica]
          Length = 555

 Score =  129 bits (323), Expect(2) = 7e-44
 Identities = 65/91 (71%), Positives = 76/91 (83%)
 Frame = -3

Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
           E TPDTS+ +PEETV RQHM KDIH+LL+GL+ RER+VLVLR+GL ++  KSLEEIGR F
Sbjct: 463 EFTPDTSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLF 522

Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
            VSKEWIRKIE+KAL KLR EE+   LSHYL
Sbjct: 523 HVSKEWIRKIEKKALMKLRVEESHKYLSHYL 553



 Score = 77.4 bits (189), Expect(2) = 7e-44
 Identities = 40/50 (80%), Positives = 42/50 (84%)
 Frame = -1

Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           FTLSKAINQIQKARK    SH KYPDD+EIAK TGLSLA+I SAS CLRV
Sbjct: 396 FTLSKAINQIQKARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRV 445


>ref|XP_008220144.1| PREDICTED: RNA polymerase sigma factor sigC-like [Prunus mume]
          Length = 553

 Score =  127 bits (320), Expect(2) = 1e-43
 Identities = 64/91 (70%), Positives = 76/91 (83%)
 Frame = -3

Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
           E TPDTS+ +PEETV RQHM KDIH+LL+GL+ RER+VLVLR+GL ++  KSLEEIGR F
Sbjct: 461 EFTPDTSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLF 520

Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
            VSKEWIRKIE+KAL KL+ EE+   LSHYL
Sbjct: 521 HVSKEWIRKIEKKALMKLKVEESHKYLSHYL 551



 Score = 77.4 bits (189), Expect(2) = 1e-43
 Identities = 40/50 (80%), Positives = 42/50 (84%)
 Frame = -1

Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           FTLSKAINQIQKARK    SH KYPDD+EIAK TGLSLA+I SAS CLRV
Sbjct: 394 FTLSKAINQIQKARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRV 443


>ref|XP_008220143.1| PREDICTED: RNA polymerase sigma factor sigC-like [Prunus mume]
          Length = 175

 Score =  127 bits (320), Expect(2) = 1e-43
 Identities = 64/91 (70%), Positives = 76/91 (83%)
 Frame = -3

Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
           E TPDTS+ +PEETV RQHM KDIH+LL+GL+ RER+VLVLR+GL ++  KSLEEIGR F
Sbjct: 83  EFTPDTSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLF 142

Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
            VSKEWIRKIE+KAL KL+ EE+   LSHYL
Sbjct: 143 HVSKEWIRKIEKKALMKLKVEESHKYLSHYL 173



 Score = 77.4 bits (189), Expect(2) = 1e-43
 Identities = 40/50 (80%), Positives = 42/50 (84%)
 Frame = -1

Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           FTLSKAINQIQKARK    SH KYPDD+EIAK TGLSLA+I SAS CLRV
Sbjct: 16  FTLSKAINQIQKARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRV 65


>ref|XP_008365120.1| PREDICTED: RNA polymerase sigma factor sigC-like [Malus domestica]
          Length = 559

 Score =  127 bits (318), Expect(2) = 4e-43
 Identities = 63/91 (69%), Positives = 76/91 (83%)
 Frame = -3

Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
           E T D SI +PEETVTRQHM KDIH+LL+ L+ +ER+VLVLR+GL ++  KSLEEIG+ F
Sbjct: 466 EFTADKSIKSPEETVTRQHMKKDIHDLLKCLNSKERQVLVLRYGLNNYDPKSLEEIGKLF 525

Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
            VSKEWIRKIE+KAL KLRD+ET  +LSHYL
Sbjct: 526 DVSKEWIRKIEKKALTKLRDDETHRSLSHYL 556



 Score = 76.6 bits (187), Expect(2) = 4e-43
 Identities = 40/50 (80%), Positives = 41/50 (82%)
 Frame = -1

Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           FTLSKAINQIQKARK    S  KYPDDDEIAK TGLSLA+I SAS CLRV
Sbjct: 399 FTLSKAINQIQKARKATYNSQMKYPDDDEIAKITGLSLARIKSASTCLRV 448


>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
            gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
            C, putative [Theobroma cacao]
          Length = 848

 Score =  123 bits (309), Expect(2) = 7e-43
 Identities = 61/91 (67%), Positives = 73/91 (80%)
 Frame = -3

Query: 780  ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
            E  PD S+ +PE+TV RQHM +DIH+LL GLD RER+V+VLR+GL+    KSLEEIGR F
Sbjct: 756  EFIPDLSVRSPEKTVMRQHMKEDIHDLLNGLDARERQVMVLRYGLKGSPPKSLEEIGRLF 815

Query: 600  CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
             VSKEWIR+IE KA+ KLRD+ET  NLSHYL
Sbjct: 816  HVSKEWIRRIEMKAMKKLRDKETCRNLSHYL 846



 Score = 79.3 bits (194), Expect(2) = 7e-43
 Identities = 39/49 (79%), Positives = 44/49 (89%)
 Frame = -1

Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           TLS+AI QIQKARK L+ SHGKYPD+D IAKFTGLSLAKI SA+KC+RV
Sbjct: 690 TLSRAIVQIQKARKALSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRV 738


>gb|KHG01096.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
          Length = 556

 Score =  125 bits (314), Expect(2) = 2e-42
 Identities = 62/91 (68%), Positives = 74/91 (81%)
 Frame = -3

Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
           E  PD SI +PE+TV RQHM +DI++LL GL+ RER+V+VLR+GL     KSLEEIGR F
Sbjct: 464 EFIPDASICSPEKTVMRQHMKEDINDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLF 523

Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
           CVSKEWIR+IE KA+AKLRD+ET  NLSHYL
Sbjct: 524 CVSKEWIRRIEMKAMAKLRDKETCRNLSHYL 554



 Score = 75.9 bits (185), Expect(2) = 2e-42
 Identities = 37/49 (75%), Positives = 43/49 (87%)
 Frame = -1

Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           TLS+AI QIQKARK L+ SHGKYP++DEIAK TGLSL+KI SA+KC RV
Sbjct: 398 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRV 446


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  120 bits (301), Expect(2) = 4e-42
 Identities = 60/91 (65%), Positives = 70/91 (76%)
 Frame = -3

Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
           E TPDTSI +PEE   +Q   KDIHNLL+GLDPRER++LVLR+G  +   KSLEEIGR F
Sbjct: 519 EFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRF 578

Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
            VSKEWIRK+E+ ALA LRDEE   NL HY+
Sbjct: 579 NVSKEWIRKLEKTALANLRDEEICQNLRHYV 609



 Score = 79.7 bits (195), Expect(2) = 4e-42
 Identities = 39/50 (78%), Positives = 43/50 (86%)
 Frame = -1

Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           FTL++AI QIQKARK L  SHG+YPDD+EIAKFTGLSLAKI SA  CLRV
Sbjct: 452 FTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRV 501


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC [Vitis vinifera]
           gi|296081598|emb|CBI20603.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score =  120 bits (301), Expect(2) = 4e-42
 Identities = 60/91 (65%), Positives = 70/91 (76%)
 Frame = -3

Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
           E TPDTSI +PEE   +Q   KDIHNLL+GLDPRER++LVLR+G  +   KSLEEIGR F
Sbjct: 469 EFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRF 528

Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
            VSKEWIRK+E+ ALA LRDEE   NL HY+
Sbjct: 529 NVSKEWIRKLEKTALANLRDEEICQNLRHYV 559



 Score = 79.7 bits (195), Expect(2) = 4e-42
 Identities = 39/50 (78%), Positives = 43/50 (86%)
 Frame = -1

Query: 932 FTLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           FTL++AI QIQKARK L  SHG+YPDD+EIAKFTGLSLAKI SA  CLRV
Sbjct: 402 FTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRV 451


>ref|XP_010244378.1| PREDICTED: RNA polymerase sigma factor sigC [Nelumbo nucifera]
           gi|720088207|ref|XP_010244379.1| PREDICTED: RNA
           polymerase sigma factor sigC [Nelumbo nucifera]
          Length = 558

 Score =  129 bits (324), Expect(2) = 6e-42
 Identities = 63/93 (67%), Positives = 74/93 (79%)
 Frame = -3

Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
           E  PDTSI TPE+ V RQHM KDIH LL+GL PRER+VLVLR+GL D  C+SLEEIGR F
Sbjct: 466 EFMPDTSIKTPEDIVMRQHMRKDIHKLLQGLHPRERKVLVLRYGLCDGRCRSLEEIGRLF 525

Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYLYL 502
            V+KEWIRKIE+ A+ K+R EE + NLS YL+L
Sbjct: 526 NVTKEWIRKIEKAAMTKVRTEEVQRNLSEYLHL 558



 Score = 70.5 bits (171), Expect(2) = 6e-42
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = -1

Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           TLS+AINQI K RK+   +HG+YPDDDEI+K TGLS+AK+  A KCLRV
Sbjct: 400 TLSRAINQIHKTRKSFFNTHGRYPDDDEISKCTGLSVAKVRLAGKCLRV 448


>ref|XP_012450461.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X1
           [Gossypium raimondii] gi|823235651|ref|XP_012450462.1|
           PREDICTED: RNA polymerase sigma factor sigC-like isoform
           X1 [Gossypium raimondii] gi|763798661|gb|KJB65616.1|
           hypothetical protein B456_010G103500 [Gossypium
           raimondii]
          Length = 578

 Score =  123 bits (309), Expect(2) = 8e-42
 Identities = 62/91 (68%), Positives = 73/91 (80%)
 Frame = -3

Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
           E  PD SI +PE+TV RQHM +DIH+LL GL+ RER+V+VLR+GL     KSLEEIGR F
Sbjct: 486 EFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLF 545

Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
            VSKEWIR+IE KA+AKLRD+ET  NLSHYL
Sbjct: 546 RVSKEWIRRIEMKAMAKLRDKETCRNLSHYL 576



 Score = 75.9 bits (185), Expect(2) = 8e-42
 Identities = 37/49 (75%), Positives = 43/49 (87%)
 Frame = -1

Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           TLS+AI QIQKARK L+ SHGKYP++DEIAK TGLSL+KI SA+KC RV
Sbjct: 420 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRV 468


>ref|XP_012450463.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X2
           [Gossypium raimondii]
          Length = 577

 Score =  123 bits (309), Expect(2) = 8e-42
 Identities = 62/91 (68%), Positives = 73/91 (80%)
 Frame = -3

Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
           E  PD SI +PE+TV RQHM +DIH+LL GL+ RER+V+VLR+GL     KSLEEIGR F
Sbjct: 485 EFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLF 544

Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
            VSKEWIR+IE KA+AKLRD+ET  NLSHYL
Sbjct: 545 RVSKEWIRRIEMKAMAKLRDKETCRNLSHYL 575



 Score = 75.9 bits (185), Expect(2) = 8e-42
 Identities = 37/49 (75%), Positives = 43/49 (87%)
 Frame = -1

Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           TLS+AI QIQKARK L+ SHGKYP++DEIAK TGLSL+KI SA+KC RV
Sbjct: 419 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRV 467


>ref|XP_012450464.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X3
           [Gossypium raimondii]
          Length = 576

 Score =  123 bits (309), Expect(2) = 8e-42
 Identities = 62/91 (68%), Positives = 73/91 (80%)
 Frame = -3

Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
           E  PD SI +PE+TV RQHM +DIH+LL GL+ RER+V+VLR+GL     KSLEEIGR F
Sbjct: 484 EFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLF 543

Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
            VSKEWIR+IE KA+AKLRD+ET  NLSHYL
Sbjct: 544 RVSKEWIRRIEMKAMAKLRDKETCRNLSHYL 574



 Score = 75.9 bits (185), Expect(2) = 8e-42
 Identities = 37/49 (75%), Positives = 43/49 (87%)
 Frame = -1

Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           TLS+AI QIQKARK L+ SHGKYP++DEIAK TGLSL+KI SA+KC RV
Sbjct: 418 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRV 466


>ref|XP_012450465.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X4
           [Gossypium raimondii] gi|763798660|gb|KJB65615.1|
           hypothetical protein B456_010G103500 [Gossypium
           raimondii]
          Length = 565

 Score =  123 bits (309), Expect(2) = 8e-42
 Identities = 62/91 (68%), Positives = 73/91 (80%)
 Frame = -3

Query: 780 ELTPDTSIMTPEETVTRQHMLKDIHNLLRGLDPRERRVLVLRFGLRDHHCKSLEEIGRTF 601
           E  PD SI +PE+TV RQHM +DIH+LL GL+ RER+V+VLR+GL     KSLEEIGR F
Sbjct: 473 EFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLF 532

Query: 600 CVSKEWIRKIERKALAKLRDEETRTNLSHYL 508
            VSKEWIR+IE KA+AKLRD+ET  NLSHYL
Sbjct: 533 RVSKEWIRRIEMKAMAKLRDKETCRNLSHYL 563



 Score = 75.9 bits (185), Expect(2) = 8e-42
 Identities = 37/49 (75%), Positives = 43/49 (87%)
 Frame = -1

Query: 929 TLSKAINQIQKARKTLNYSHGKYPDDDEIAKFTGLSLAKITSASKCLRV 783
           TLS+AI QIQKARK L+ SHGKYP++DEIAK TGLSL+KI SA+KC RV
Sbjct: 407 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRV 455


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