BLASTX nr result

ID: Cornus23_contig00010543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00010543
         (303 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40152.3| unnamed protein product [Vitis vinifera]               68   3e-19
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V sub...    68   3e-19
ref|XP_012449584.1| PREDICTED: DNA-directed RNA polymerase V sub...    67   7e-09
ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V sub...    67   7e-09
gb|KJB67890.1| hypothetical protein B456_010G216600 [Gossypium r...    67   7e-09
gb|KJB67889.1| hypothetical protein B456_010G216600 [Gossypium r...    67   7e-09
gb|KJB67888.1| hypothetical protein B456_010G216600 [Gossypium r...    67   7e-09
ref|XP_012449583.1| PREDICTED: DNA-directed RNA polymerase V sub...    67   7e-09
gb|KHG00588.1| DNA-directed RNA polymerase E subunit 1 -like pro...    67   7e-09
gb|KDP40529.1| hypothetical protein JCGZ_24528 [Jatropha curcas]       67   7e-09
ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, put...    66   1e-08
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put...    66   1e-08
emb|CDP18669.1| unnamed protein product [Coffea canephora]             65   2e-08
ref|XP_011089162.1| PREDICTED: DNA-directed RNA polymerase V sub...    65   3e-08
ref|XP_010315461.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    64   4e-08
ref|XP_009802889.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    64   4e-08
ref|XP_009623505.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    64   4e-08
ref|XP_012574254.1| PREDICTED: DNA-directed RNA polymerase V sub...    64   6e-08
ref|XP_012574253.1| PREDICTED: DNA-directed RNA polymerase V sub...    64   6e-08
ref|XP_012574252.1| PREDICTED: DNA-directed RNA polymerase V sub...    64   6e-08

>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score = 67.8 bits (164), Expect(2) = 3e-19
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -1

Query: 210 PNDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
           PN+S TK WLEKM+ LFIRKGS FSSRSVITGD YKRV+E
Sbjct: 359 PNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNE 398



 Score = 53.9 bits (128), Expect(2) = 3e-19
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = -3

Query: 91  IGLPFEIAQRITFEERVNQHNMKYL*KLVD 2
           IGLPFEIAQRITFEERVN HNMK+L  LVD
Sbjct: 399 IGLPFEIAQRITFEERVNVHNMKHLQNLVD 428


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Vitis vinifera]
           gi|731435545|ref|XP_010645605.1| PREDICTED: DNA-directed
           RNA polymerase V subunit 1 [Vitis vinifera]
          Length = 1830

 Score = 67.8 bits (164), Expect(2) = 3e-19
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -1

Query: 210 PNDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
           PN+S TK WLEKM+ LFIRKGS FSSRSVITGD YKRV+E
Sbjct: 299 PNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNE 338



 Score = 53.9 bits (128), Expect(2) = 3e-19
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = -3

Query: 91  IGLPFEIAQRITFEERVNQHNMKYL*KLVD 2
           IGLPFEIAQRITFEERVN HNMK+L  LVD
Sbjct: 339 IGLPFEIAQRITFEERVNVHNMKHLQNLVD 368


>ref|XP_012449584.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
           [Gossypium raimondii]
          Length = 1921

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 31/39 (79%), Positives = 35/39 (89%)
 Frame = -1

Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
           +DS TK WLEKM+ LFIRKGS FSSRSVITGDPYK+V+E
Sbjct: 300 SDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNE 338


>ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Jatropha
           curcas]
          Length = 1980

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 32/39 (82%), Positives = 34/39 (87%)
 Frame = -1

Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
           NDS TK WLEKM+ LFIRKGS FSSRSVITGD YKRV+E
Sbjct: 311 NDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNE 349


>gb|KJB67890.1| hypothetical protein B456_010G216600 [Gossypium raimondii]
          Length = 1841

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 31/39 (79%), Positives = 35/39 (89%)
 Frame = -1

Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
           +DS TK WLEKM+ LFIRKGS FSSRSVITGDPYK+V+E
Sbjct: 291 SDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNE 329


>gb|KJB67889.1| hypothetical protein B456_010G216600 [Gossypium raimondii]
          Length = 1883

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 31/39 (79%), Positives = 35/39 (89%)
 Frame = -1

Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
           +DS TK WLEKM+ LFIRKGS FSSRSVITGDPYK+V+E
Sbjct: 300 SDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNE 338


>gb|KJB67888.1| hypothetical protein B456_010G216600 [Gossypium raimondii]
          Length = 1406

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 31/39 (79%), Positives = 35/39 (89%)
 Frame = -1

Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
           +DS TK WLEKM+ LFIRKGS FSSRSVITGDPYK+V+E
Sbjct: 300 SDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNE 338


>ref|XP_012449583.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
           [Gossypium raimondii] gi|763800932|gb|KJB67887.1|
           hypothetical protein B456_010G216600 [Gossypium
           raimondii]
          Length = 1966

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 31/39 (79%), Positives = 35/39 (89%)
 Frame = -1

Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
           +DS TK WLEKM+ LFIRKGS FSSRSVITGDPYK+V+E
Sbjct: 300 SDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNE 338


>gb|KHG00588.1| DNA-directed RNA polymerase E subunit 1 -like protein [Gossypium
           arboreum]
          Length = 1996

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 31/39 (79%), Positives = 35/39 (89%)
 Frame = -1

Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
           +DS TK WLEKM+ LFIRKGS FSSRSVITGDPYK+V+E
Sbjct: 300 SDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNE 338


>gb|KDP40529.1| hypothetical protein JCGZ_24528 [Jatropha curcas]
          Length = 1821

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 32/39 (82%), Positives = 34/39 (87%)
 Frame = -1

Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
           NDS TK WLEKM+ LFIRKGS FSSRSVITGD YKRV+E
Sbjct: 152 NDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNE 190


>ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
           [Theobroma cacao] gi|508727914|gb|EOY19811.1|
           DNA-directed RNA polymerase E subunit 1, putative
           isoform 3 [Theobroma cacao]
          Length = 1675

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 32/46 (69%), Positives = 39/46 (84%)
 Frame = -1

Query: 228 GLTKN*PNDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
           G++K+  +DS TK WLEKM+ LFIRKGS FSSR VITGDPYK+V+E
Sbjct: 295 GISKD-ASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNE 339


>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
           [Theobroma cacao] gi|590569189|ref|XP_007011000.1|
           DNA-directed RNA polymerase E subunit 1, putative
           isoform 1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
           DNA-directed RNA polymerase E subunit 1, putative
           isoform 1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
           DNA-directed RNA polymerase E subunit 1, putative
           isoform 1 [Theobroma cacao]
          Length = 1788

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 32/46 (69%), Positives = 39/46 (84%)
 Frame = -1

Query: 228 GLTKN*PNDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
           G++K+  +DS TK WLEKM+ LFIRKGS FSSR VITGDPYK+V+E
Sbjct: 295 GISKD-ASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNE 339


>emb|CDP18669.1| unnamed protein product [Coffea canephora]
          Length = 1946

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 32/39 (82%), Positives = 33/39 (84%)
 Frame = -1

Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
           N S TK WLEKMK LFIRKGS FSSRSVITGDPYK V+E
Sbjct: 300 NTSSTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVNE 338



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 44/91 (48%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
 Frame = -3

Query: 259 KASRDIDTRFGINKEL----TQ*FFY*NMA*KDEKIVY*KGFKVFFS*CHNW*SI*KG-G 95
           KASRD+D RFG++KE     T+ +       +  K ++ +    F S         KG  
Sbjct: 284 KASRDVDPRFGVSKESNTSSTKAWL------EKMKTLFIRKGSGFSSRSVITGDPYKGVN 337

Query: 94  *IGLPFEIAQRITFEERVNQHNMKYL*KLVD 2
            IGLPFEIAQRITFEERV+QHNM YL KLVD
Sbjct: 338 EIGLPFEIAQRITFEERVSQHNMNYLQKLVD 368


>ref|XP_011089162.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Sesamum
           indicum]
          Length = 2096

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 45/91 (49%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
 Frame = -3

Query: 259 KASRDIDTRFGINKEL----TQ*FFY*NMA*KDEKIVY*KGFKVFFS*CHNW*SI*KG-G 95
           KASRD+DTRFG+NKE+    T+ +       +  K ++ +    F S         KG  
Sbjct: 274 KASRDVDTRFGVNKEINASSTKAWL------EKMKTLFIRKGSGFSSRSVITGDPFKGVS 327

Query: 94  *IGLPFEIAQRITFEERVNQHNMKYL*KLVD 2
            IGLPFEIAQ+ITFEERVNQHNM++L KLVD
Sbjct: 328 EIGLPFEIAQKITFEERVNQHNMQFLQKLVD 358


>ref|XP_010315461.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V
           subunit 1 [Solanum lycopersicum]
          Length = 1968

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 31/38 (81%), Positives = 32/38 (84%)
 Frame = -1

Query: 204 DSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
           D+ TK WLEKMK LFIRKGS FSSRSVITGDPYK V E
Sbjct: 304 DTTTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVGE 341



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 43/87 (49%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = -3

Query: 259 KASRDIDTRFGINKELTQ*FFY*NMA*KDEKIVY*KGFKVFFS*CHNW*SI*KG-G*IGL 83
           KASRD+D RFGI+KE         +  +  K ++ +    F S         KG G IGL
Sbjct: 287 KASRDVDKRFGIHKEAADTTTKAWL--EKMKTLFIRKGSGFSSRSVITGDPYKGVGEIGL 344

Query: 82  PFEIAQRITFEERVNQHNMKYL*KLVD 2
           P EIAQ+ITFEERV+QHNM YL KLVD
Sbjct: 345 PCEIAQKITFEERVSQHNMAYLQKLVD 371


>ref|XP_009802889.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V
           subunit 1 [Nicotiana sylvestris]
          Length = 2055

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 31/38 (81%), Positives = 32/38 (84%)
 Frame = -1

Query: 204 DSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
           D+ TK WLEKMK LFIRKGS FSSRSVITGDPYK V E
Sbjct: 303 DTTTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVGE 340


>ref|XP_009623505.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V
           subunit 1 [Nicotiana tomentosiformis]
          Length = 1983

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 31/38 (81%), Positives = 32/38 (84%)
 Frame = -1

Query: 204 DSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
           D+ TK WLEKMK LFIRKGS FSSRSVITGDPYK V E
Sbjct: 303 DTTTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVGE 340



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 43/87 (49%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = -3

Query: 259 KASRDIDTRFGINKELTQ*FFY*NMA*KDEKIVY*KGFKVFFS*CHNW*SI*KG-G*IGL 83
           KASRD+D RFG NKE         +  +  K ++ +    F S         KG G IGL
Sbjct: 286 KASRDVDKRFGTNKEAADTTTKAWL--EKMKTLFIRKGSGFSSRSVITGDPYKGVGEIGL 343

Query: 82  PFEIAQRITFEERVNQHNMKYL*KLVD 2
           P EIAQ+ITFEERV+QHNM YL KLVD
Sbjct: 344 PCEIAQKITFEERVSQHNMAYLQKLVD 370


>ref|XP_012574254.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X4
           [Cicer arietinum]
          Length = 2181

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = -1

Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
           NDS TK WLEKM+ LFIRKGS FSSR+VITGD YK+++E
Sbjct: 222 NDSSTKAWLEKMRTLFIRKGSGFSSRNVITGDGYKKINE 260



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
 Frame = -3

Query: 259 KASRDIDTRFGINKELTQ*------------FFY*NMA*KDEKIVY*KGFKVFFS*CHNW 116
           KA+RDI+TR+G+NKEL               F           ++   G+K         
Sbjct: 206 KATRDIETRYGVNKELNDSSTKAWLEKMRTLFIRKGSGFSSRNVITGDGYK--------- 256

Query: 115 *SI*KGG*IGLPFEIAQRITFEERVNQHNMKYL*KLVD 2
               K   +G+P E+AQRITFEERV+ HN++YL KLVD
Sbjct: 257 ----KINEVGIPLEVAQRITFEERVSIHNIRYLQKLVD 290


>ref|XP_012574253.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X3
           [Cicer arietinum]
          Length = 2210

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = -1

Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
           NDS TK WLEKM+ LFIRKGS FSSR+VITGD YK+++E
Sbjct: 304 NDSSTKAWLEKMRTLFIRKGSGFSSRNVITGDGYKKINE 342



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
 Frame = -3

Query: 259 KASRDIDTRFGINKELTQ*------------FFY*NMA*KDEKIVY*KGFKVFFS*CHNW 116
           KA+RDI+TR+G+NKEL               F           ++   G+K         
Sbjct: 288 KATRDIETRYGVNKELNDSSTKAWLEKMRTLFIRKGSGFSSRNVITGDGYK--------- 338

Query: 115 *SI*KGG*IGLPFEIAQRITFEERVNQHNMKYL*KLVD 2
               K   +G+P E+AQRITFEERV+ HN++YL KLVD
Sbjct: 339 ----KINEVGIPLEVAQRITFEERVSIHNIRYLQKLVD 372


>ref|XP_012574252.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
           [Cicer arietinum]
          Length = 2253

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = -1

Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
           NDS TK WLEKM+ LFIRKGS FSSR+VITGD YK+++E
Sbjct: 304 NDSSTKAWLEKMRTLFIRKGSGFSSRNVITGDGYKKINE 342



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
 Frame = -3

Query: 259 KASRDIDTRFGINKELTQ*------------FFY*NMA*KDEKIVY*KGFKVFFS*CHNW 116
           KA+RDI+TR+G+NKEL               F           ++   G+K         
Sbjct: 288 KATRDIETRYGVNKELNDSSTKAWLEKMRTLFIRKGSGFSSRNVITGDGYK--------- 338

Query: 115 *SI*KGG*IGLPFEIAQRITFEERVNQHNMKYL*KLVD 2
               K   +G+P E+AQRITFEERV+ HN++YL KLVD
Sbjct: 339 ----KINEVGIPLEVAQRITFEERVSIHNIRYLQKLVD 372


Top