BLASTX nr result
ID: Cornus23_contig00010543
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00010543
(303 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 68 3e-19
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V sub... 68 3e-19
ref|XP_012449584.1| PREDICTED: DNA-directed RNA polymerase V sub... 67 7e-09
ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V sub... 67 7e-09
gb|KJB67890.1| hypothetical protein B456_010G216600 [Gossypium r... 67 7e-09
gb|KJB67889.1| hypothetical protein B456_010G216600 [Gossypium r... 67 7e-09
gb|KJB67888.1| hypothetical protein B456_010G216600 [Gossypium r... 67 7e-09
ref|XP_012449583.1| PREDICTED: DNA-directed RNA polymerase V sub... 67 7e-09
gb|KHG00588.1| DNA-directed RNA polymerase E subunit 1 -like pro... 67 7e-09
gb|KDP40529.1| hypothetical protein JCGZ_24528 [Jatropha curcas] 67 7e-09
ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, put... 66 1e-08
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put... 66 1e-08
emb|CDP18669.1| unnamed protein product [Coffea canephora] 65 2e-08
ref|XP_011089162.1| PREDICTED: DNA-directed RNA polymerase V sub... 65 3e-08
ref|XP_010315461.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 64 4e-08
ref|XP_009802889.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 64 4e-08
ref|XP_009623505.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 64 4e-08
ref|XP_012574254.1| PREDICTED: DNA-directed RNA polymerase V sub... 64 6e-08
ref|XP_012574253.1| PREDICTED: DNA-directed RNA polymerase V sub... 64 6e-08
ref|XP_012574252.1| PREDICTED: DNA-directed RNA polymerase V sub... 64 6e-08
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 67.8 bits (164), Expect(2) = 3e-19
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -1
Query: 210 PNDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
PN+S TK WLEKM+ LFIRKGS FSSRSVITGD YKRV+E
Sbjct: 359 PNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNE 398
Score = 53.9 bits (128), Expect(2) = 3e-19
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = -3
Query: 91 IGLPFEIAQRITFEERVNQHNMKYL*KLVD 2
IGLPFEIAQRITFEERVN HNMK+L LVD
Sbjct: 399 IGLPFEIAQRITFEERVNVHNMKHLQNLVD 428
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Vitis vinifera]
gi|731435545|ref|XP_010645605.1| PREDICTED: DNA-directed
RNA polymerase V subunit 1 [Vitis vinifera]
Length = 1830
Score = 67.8 bits (164), Expect(2) = 3e-19
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -1
Query: 210 PNDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
PN+S TK WLEKM+ LFIRKGS FSSRSVITGD YKRV+E
Sbjct: 299 PNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNE 338
Score = 53.9 bits (128), Expect(2) = 3e-19
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = -3
Query: 91 IGLPFEIAQRITFEERVNQHNMKYL*KLVD 2
IGLPFEIAQRITFEERVN HNMK+L LVD
Sbjct: 339 IGLPFEIAQRITFEERVNVHNMKHLQNLVD 368
>ref|XP_012449584.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
[Gossypium raimondii]
Length = 1921
Score = 66.6 bits (161), Expect = 7e-09
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = -1
Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
+DS TK WLEKM+ LFIRKGS FSSRSVITGDPYK+V+E
Sbjct: 300 SDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNE 338
>ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Jatropha
curcas]
Length = 1980
Score = 66.6 bits (161), Expect = 7e-09
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = -1
Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
NDS TK WLEKM+ LFIRKGS FSSRSVITGD YKRV+E
Sbjct: 311 NDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNE 349
>gb|KJB67890.1| hypothetical protein B456_010G216600 [Gossypium raimondii]
Length = 1841
Score = 66.6 bits (161), Expect = 7e-09
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = -1
Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
+DS TK WLEKM+ LFIRKGS FSSRSVITGDPYK+V+E
Sbjct: 291 SDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNE 329
>gb|KJB67889.1| hypothetical protein B456_010G216600 [Gossypium raimondii]
Length = 1883
Score = 66.6 bits (161), Expect = 7e-09
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = -1
Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
+DS TK WLEKM+ LFIRKGS FSSRSVITGDPYK+V+E
Sbjct: 300 SDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNE 338
>gb|KJB67888.1| hypothetical protein B456_010G216600 [Gossypium raimondii]
Length = 1406
Score = 66.6 bits (161), Expect = 7e-09
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = -1
Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
+DS TK WLEKM+ LFIRKGS FSSRSVITGDPYK+V+E
Sbjct: 300 SDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNE 338
>ref|XP_012449583.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
[Gossypium raimondii] gi|763800932|gb|KJB67887.1|
hypothetical protein B456_010G216600 [Gossypium
raimondii]
Length = 1966
Score = 66.6 bits (161), Expect = 7e-09
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = -1
Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
+DS TK WLEKM+ LFIRKGS FSSRSVITGDPYK+V+E
Sbjct: 300 SDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNE 338
>gb|KHG00588.1| DNA-directed RNA polymerase E subunit 1 -like protein [Gossypium
arboreum]
Length = 1996
Score = 66.6 bits (161), Expect = 7e-09
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = -1
Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
+DS TK WLEKM+ LFIRKGS FSSRSVITGDPYK+V+E
Sbjct: 300 SDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNE 338
>gb|KDP40529.1| hypothetical protein JCGZ_24528 [Jatropha curcas]
Length = 1821
Score = 66.6 bits (161), Expect = 7e-09
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = -1
Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
NDS TK WLEKM+ LFIRKGS FSSRSVITGD YKRV+E
Sbjct: 152 NDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNE 190
>ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
[Theobroma cacao] gi|508727914|gb|EOY19811.1|
DNA-directed RNA polymerase E subunit 1, putative
isoform 3 [Theobroma cacao]
Length = 1675
Score = 65.9 bits (159), Expect = 1e-08
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = -1
Query: 228 GLTKN*PNDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
G++K+ +DS TK WLEKM+ LFIRKGS FSSR VITGDPYK+V+E
Sbjct: 295 GISKD-ASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNE 339
>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|590569189|ref|XP_007011000.1|
DNA-directed RNA polymerase E subunit 1, putative
isoform 1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
DNA-directed RNA polymerase E subunit 1, putative
isoform 1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative
isoform 1 [Theobroma cacao]
Length = 1788
Score = 65.9 bits (159), Expect = 1e-08
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = -1
Query: 228 GLTKN*PNDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
G++K+ +DS TK WLEKM+ LFIRKGS FSSR VITGDPYK+V+E
Sbjct: 295 GISKD-ASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNE 339
>emb|CDP18669.1| unnamed protein product [Coffea canephora]
Length = 1946
Score = 65.5 bits (158), Expect = 2e-08
Identities = 32/39 (82%), Positives = 33/39 (84%)
Frame = -1
Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
N S TK WLEKMK LFIRKGS FSSRSVITGDPYK V+E
Sbjct: 300 NTSSTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVNE 338
Score = 59.3 bits (142), Expect = 1e-06
Identities = 44/91 (48%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Frame = -3
Query: 259 KASRDIDTRFGINKEL----TQ*FFY*NMA*KDEKIVY*KGFKVFFS*CHNW*SI*KG-G 95
KASRD+D RFG++KE T+ + + K ++ + F S KG
Sbjct: 284 KASRDVDPRFGVSKESNTSSTKAWL------EKMKTLFIRKGSGFSSRSVITGDPYKGVN 337
Query: 94 *IGLPFEIAQRITFEERVNQHNMKYL*KLVD 2
IGLPFEIAQRITFEERV+QHNM YL KLVD
Sbjct: 338 EIGLPFEIAQRITFEERVSQHNMNYLQKLVD 368
>ref|XP_011089162.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Sesamum
indicum]
Length = 2096
Score = 64.7 bits (156), Expect = 3e-08
Identities = 45/91 (49%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Frame = -3
Query: 259 KASRDIDTRFGINKEL----TQ*FFY*NMA*KDEKIVY*KGFKVFFS*CHNW*SI*KG-G 95
KASRD+DTRFG+NKE+ T+ + + K ++ + F S KG
Sbjct: 274 KASRDVDTRFGVNKEINASSTKAWL------EKMKTLFIRKGSGFSSRSVITGDPFKGVS 327
Query: 94 *IGLPFEIAQRITFEERVNQHNMKYL*KLVD 2
IGLPFEIAQ+ITFEERVNQHNM++L KLVD
Sbjct: 328 EIGLPFEIAQKITFEERVNQHNMQFLQKLVD 358
>ref|XP_010315461.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V
subunit 1 [Solanum lycopersicum]
Length = 1968
Score = 63.9 bits (154), Expect = 4e-08
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = -1
Query: 204 DSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
D+ TK WLEKMK LFIRKGS FSSRSVITGDPYK V E
Sbjct: 304 DTTTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVGE 341
Score = 57.8 bits (138), Expect = 3e-06
Identities = 43/87 (49%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = -3
Query: 259 KASRDIDTRFGINKELTQ*FFY*NMA*KDEKIVY*KGFKVFFS*CHNW*SI*KG-G*IGL 83
KASRD+D RFGI+KE + + K ++ + F S KG G IGL
Sbjct: 287 KASRDVDKRFGIHKEAADTTTKAWL--EKMKTLFIRKGSGFSSRSVITGDPYKGVGEIGL 344
Query: 82 PFEIAQRITFEERVNQHNMKYL*KLVD 2
P EIAQ+ITFEERV+QHNM YL KLVD
Sbjct: 345 PCEIAQKITFEERVSQHNMAYLQKLVD 371
>ref|XP_009802889.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V
subunit 1 [Nicotiana sylvestris]
Length = 2055
Score = 63.9 bits (154), Expect = 4e-08
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = -1
Query: 204 DSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
D+ TK WLEKMK LFIRKGS FSSRSVITGDPYK V E
Sbjct: 303 DTTTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVGE 340
>ref|XP_009623505.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V
subunit 1 [Nicotiana tomentosiformis]
Length = 1983
Score = 63.9 bits (154), Expect = 4e-08
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = -1
Query: 204 DSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
D+ TK WLEKMK LFIRKGS FSSRSVITGDPYK V E
Sbjct: 303 DTTTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVGE 340
Score = 57.8 bits (138), Expect = 3e-06
Identities = 43/87 (49%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = -3
Query: 259 KASRDIDTRFGINKELTQ*FFY*NMA*KDEKIVY*KGFKVFFS*CHNW*SI*KG-G*IGL 83
KASRD+D RFG NKE + + K ++ + F S KG G IGL
Sbjct: 286 KASRDVDKRFGTNKEAADTTTKAWL--EKMKTLFIRKGSGFSSRSVITGDPYKGVGEIGL 343
Query: 82 PFEIAQRITFEERVNQHNMKYL*KLVD 2
P EIAQ+ITFEERV+QHNM YL KLVD
Sbjct: 344 PCEIAQKITFEERVSQHNMAYLQKLVD 370
>ref|XP_012574254.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X4
[Cicer arietinum]
Length = 2181
Score = 63.5 bits (153), Expect = 6e-08
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = -1
Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
NDS TK WLEKM+ LFIRKGS FSSR+VITGD YK+++E
Sbjct: 222 NDSSTKAWLEKMRTLFIRKGSGFSSRNVITGDGYKKINE 260
Score = 57.8 bits (138), Expect = 3e-06
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Frame = -3
Query: 259 KASRDIDTRFGINKELTQ*------------FFY*NMA*KDEKIVY*KGFKVFFS*CHNW 116
KA+RDI+TR+G+NKEL F ++ G+K
Sbjct: 206 KATRDIETRYGVNKELNDSSTKAWLEKMRTLFIRKGSGFSSRNVITGDGYK--------- 256
Query: 115 *SI*KGG*IGLPFEIAQRITFEERVNQHNMKYL*KLVD 2
K +G+P E+AQRITFEERV+ HN++YL KLVD
Sbjct: 257 ----KINEVGIPLEVAQRITFEERVSIHNIRYLQKLVD 290
>ref|XP_012574253.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X3
[Cicer arietinum]
Length = 2210
Score = 63.5 bits (153), Expect = 6e-08
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = -1
Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
NDS TK WLEKM+ LFIRKGS FSSR+VITGD YK+++E
Sbjct: 304 NDSSTKAWLEKMRTLFIRKGSGFSSRNVITGDGYKKINE 342
Score = 57.8 bits (138), Expect = 3e-06
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Frame = -3
Query: 259 KASRDIDTRFGINKELTQ*------------FFY*NMA*KDEKIVY*KGFKVFFS*CHNW 116
KA+RDI+TR+G+NKEL F ++ G+K
Sbjct: 288 KATRDIETRYGVNKELNDSSTKAWLEKMRTLFIRKGSGFSSRNVITGDGYK--------- 338
Query: 115 *SI*KGG*IGLPFEIAQRITFEERVNQHNMKYL*KLVD 2
K +G+P E+AQRITFEERV+ HN++YL KLVD
Sbjct: 339 ----KINEVGIPLEVAQRITFEERVSIHNIRYLQKLVD 372
>ref|XP_012574252.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
[Cicer arietinum]
Length = 2253
Score = 63.5 bits (153), Expect = 6e-08
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = -1
Query: 207 NDSFTKTWLEKMKKLFIRKGSRFSSRSVITGDPYKRVDE 91
NDS TK WLEKM+ LFIRKGS FSSR+VITGD YK+++E
Sbjct: 304 NDSSTKAWLEKMRTLFIRKGSGFSSRNVITGDGYKKINE 342
Score = 57.8 bits (138), Expect = 3e-06
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Frame = -3
Query: 259 KASRDIDTRFGINKELTQ*------------FFY*NMA*KDEKIVY*KGFKVFFS*CHNW 116
KA+RDI+TR+G+NKEL F ++ G+K
Sbjct: 288 KATRDIETRYGVNKELNDSSTKAWLEKMRTLFIRKGSGFSSRNVITGDGYK--------- 338
Query: 115 *SI*KGG*IGLPFEIAQRITFEERVNQHNMKYL*KLVD 2
K +G+P E+AQRITFEERV+ HN++YL KLVD
Sbjct: 339 ----KINEVGIPLEVAQRITFEERVSIHNIRYLQKLVD 372