BLASTX nr result

ID: Cornus23_contig00010397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00010397
         (921 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV su...   371   e-100
ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV su...   365   3e-98
ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV su...   365   3e-98
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun...   362   3e-97
ref|XP_008238796.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   361   4e-97
ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV su...   350   1e-93
ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV su...   350   1e-93
ref|XP_008358315.1| PREDICTED: DNA-directed RNA polymerase IV su...   349   1e-93
emb|CDP09818.1| unnamed protein product [Coffea canephora]            349   2e-93
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              349   2e-93
ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV su...   348   3e-93
ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV su...   348   3e-93
ref|XP_011014513.1| PREDICTED: DNA-directed RNA polymerase IV su...   347   7e-93
ref|XP_011029161.1| PREDICTED: DNA-directed RNA polymerase IV su...   347   7e-93
ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV su...   347   7e-93
ref|XP_009377912.1| PREDICTED: DNA-directed RNA polymerase IV su...   347   7e-93
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV su...   347   7e-93
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...   347   7e-93
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su...   345   2e-92
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   345   2e-92

>ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Vitis
            vinifera]
          Length = 1458

 Score =  371 bits (952), Expect = e-100
 Identities = 191/301 (63%), Positives = 232/301 (77%), Gaps = 4/301 (1%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSS-- 746
            +T+R+SSFSDNADLPGTLTRRLMFFMRDL I YDGTVRNAYGNQLVQFSY+ E  S+   
Sbjct: 813  VTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSD 872

Query: 745  --NDTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILE 572
              N+  C++D        M GQPVG             ALDQPIS+LE SPLLNLK++LE
Sbjct: 873  GINEDTCAYD--------MGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLE 924

Query: 571  CGVKKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCG 392
            CG++KS+ D+T SLFLSKKL +  +GFEYGALEV++HLE+LLFSDIVSTV+I FSPQ   
Sbjct: 925  CGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGS 984

Query: 391  RTHGSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVA 212
            +TH SPWVCHFH+C+E+AK+R LK HS+IDALY+  NS R   K NLP+LQITSKDC V 
Sbjct: 985  KTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSKDCFV- 1043

Query: 211  DMQKENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQP 32
            DM+KE++  FCITV+ V  S+ S +QLD +RD+VIP+LLG V+KG L+ KKVDILW D P
Sbjct: 1044 DMEKEDSDCFCITVSIV-NSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWNDNP 1102

Query: 31   N 29
            +
Sbjct: 1103 D 1103


>ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3 [Vitis
            vinifera]
          Length = 1354

 Score =  365 bits (936), Expect = 3e-98
 Identities = 190/303 (62%), Positives = 232/303 (76%), Gaps = 6/303 (1%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSS-- 746
            +T+R+SSFSDNADLPGTLTRRLMFFMRDL I YDGTVRNAYGNQLVQFSY+ E  S+   
Sbjct: 707  VTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSD 766

Query: 745  --NDTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILE 572
              N+  C++D        M GQPVG             ALDQPIS+LE SPLLNLK++LE
Sbjct: 767  GINEDTCAYD--------MGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLE 818

Query: 571  CGVKKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCG 392
            CG++KS+ D+T SLFLSKKL +  +GFEYGALEV++HLE+LLFSDIVSTV+I FSPQ   
Sbjct: 819  CGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGS 878

Query: 391  RTHGSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITS--KDCS 218
            +TH SPWVCHFH+C+E+AK+R LK HS+IDALY+  NS R   K NLP+LQITS  +DC 
Sbjct: 879  KTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSNGRDCF 938

Query: 217  VADMQKENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKD 38
            V DM+KE++  FCITV+ V  S+ S +QLD +RD+VIP+LLG V+KG L+ KKVDILW D
Sbjct: 939  V-DMEKEDSDCFCITVSIV-NSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWND 996

Query: 37   QPN 29
             P+
Sbjct: 997  NPD 999


>ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Vitis
            vinifera]
          Length = 1460

 Score =  365 bits (936), Expect = 3e-98
 Identities = 190/303 (62%), Positives = 232/303 (76%), Gaps = 6/303 (1%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSS-- 746
            +T+R+SSFSDNADLPGTLTRRLMFFMRDL I YDGTVRNAYGNQLVQFSY+ E  S+   
Sbjct: 813  VTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSD 872

Query: 745  --NDTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILE 572
              N+  C++D        M GQPVG             ALDQPIS+LE SPLLNLK++LE
Sbjct: 873  GINEDTCAYD--------MGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLE 924

Query: 571  CGVKKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCG 392
            CG++KS+ D+T SLFLSKKL +  +GFEYGALEV++HLE+LLFSDIVSTV+I FSPQ   
Sbjct: 925  CGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGS 984

Query: 391  RTHGSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITS--KDCS 218
            +TH SPWVCHFH+C+E+AK+R LK HS+IDALY+  NS R   K NLP+LQITS  +DC 
Sbjct: 985  KTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSNGRDCF 1044

Query: 217  VADMQKENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKD 38
            V DM+KE++  FCITV+ V  S+ S +QLD +RD+VIP+LLG V+KG L+ KKVDILW D
Sbjct: 1045 V-DMEKEDSDCFCITVSIV-NSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWND 1102

Query: 37   QPN 29
             P+
Sbjct: 1103 NPD 1105


>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
            gi|462406650|gb|EMJ12114.1| hypothetical protein
            PRUPE_ppa000278mg [Prunus persica]
          Length = 1356

 Score =  362 bits (928), Expect = 3e-97
 Identities = 192/306 (62%), Positives = 222/306 (72%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSSND 740
            +T+R+SSFS NADLPGTLTR+LMF MRDL   YDGTVRNAYGNQLVQFSYD  D+  S+ 
Sbjct: 715  VTSRDSSFSGNADLPGTLTRKLMFLMRDLYTAYDGTVRNAYGNQLVQFSYDI-DMDKSDS 773

Query: 739  TDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGVK 560
            T  S   ST AC  + GQPVG             ALDQP+S+LETSPLLNLK ILECG K
Sbjct: 774  TSTSHAKSTTACDGIGGQPVGSLSACALSEAAYSALDQPVSLLETSPLLNLKNILECGSK 833

Query: 559  KSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTHG 380
            KSS  +T SLFLSKKLGR  +GFEYGALEV++HL  L FSDIVSTV+I FS Q+  +   
Sbjct: 834  KSSAKQTLSLFLSKKLGRRRHGFEYGALEVKNHLVGLTFSDIVSTVMIIFSSQSNSQKRF 893

Query: 379  SPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQK 200
            SPWV HFHICKE+ ++RRLK+HSV+D+LY   NS R  LK  L +L ITSK CS A    
Sbjct: 894  SPWVTHFHICKEIVRKRRLKVHSVVDSLYARCNSARPELKIVLRSLLITSKGCSAAQTCN 953

Query: 199  ENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVSR 20
             ++ TFCITVT  E S+NSS QLD  RD+VIP+LLGTV+KGFLE KKVDILW D P  S+
Sbjct: 954  GDDDTFCITVTMPENSKNSSEQLDIARDLVIPFLLGTVVKGFLEVKKVDILWNDHPRESK 1013

Query: 19   SHFSSS 2
                SS
Sbjct: 1014 KIHGSS 1019


>ref|XP_008238796.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase IV
            subunit 1 [Prunus mume]
          Length = 1452

 Score =  361 bits (927), Expect = 4e-97
 Identities = 191/306 (62%), Positives = 222/306 (72%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSSND 740
            +T+R+SSFS NADLPGTLTR+LMF MRDL   YDGTVRNAYGNQLVQFSYD  D+  S+ 
Sbjct: 808  VTSRDSSFSGNADLPGTLTRKLMFLMRDLYTAYDGTVRNAYGNQLVQFSYDI-DMDKSDS 866

Query: 739  TDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGVK 560
            T  S+  ST AC  + GQPVG             ALDQP+S+LETSPLLNLK ILECG K
Sbjct: 867  TSTSYAKSTTACDGIGGQPVGSLSACALSEAAYSALDQPVSLLETSPLLNLKNILECGSK 926

Query: 559  KSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTHG 380
            KSS  +T SLFLS+KLGR  +GFEYGALEV++HL  L FSDIVSTV+I FS Q   +   
Sbjct: 927  KSSAKQTMSLFLSEKLGRRRHGFEYGALEVKNHLVGLTFSDIVSTVMIIFSSQNNSQKRF 986

Query: 379  SPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQK 200
            SPWV HFHICKE+ ++RRLK+HSV+D+LY   NS R  LK  L +L ITSK CS A    
Sbjct: 987  SPWVTHFHICKEIVRKRRLKVHSVVDSLYARCNSARPELKVVLRSLLITSKGCSAAQTCN 1046

Query: 199  ENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVSR 20
             ++ TFCITVT  E S+NSS QLD  RD+VIP+LLGTV+KGFLE KKVDILW D P  S+
Sbjct: 1047 GDDDTFCITVTMPENSKNSSEQLDIARDLVIPFLLGTVVKGFLEVKKVDILWNDHPRESK 1106

Query: 19   SHFSSS 2
                SS
Sbjct: 1107 KIHGSS 1112


>ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Nicotiana tomentosiformis]
          Length = 1211

 Score =  350 bits (897), Expect = 1e-93
 Identities = 187/306 (61%), Positives = 224/306 (73%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSSND 740
            LTTR+SSFS +AD+ GTL R+LMFFMRDL   YDGTVRNAYGNQ+VQFSY + D  SS  
Sbjct: 561  LTTRDSSFSGHADVSGTLNRKLMFFMRDLYSGYDGTVRNAYGNQIVQFSYYSADQISS-- 618

Query: 739  TDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGVK 560
               +++ +++A G   G PVG             ALD P+  LE SPLLNLKKILE GVK
Sbjct: 619  ---TYNRASHAIG---GHPVGSLAACAISEAAYSALDLPVGALEPSPLLNLKKILEAGVK 672

Query: 559  KSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTHG 380
             +S +KTA+LFLS++LGRW +GFEYGA+EV+ HLERLL SDIVSTV+I FSP+TC  TH 
Sbjct: 673  SNSSEKTATLFLSRRLGRWAHGFEYGAIEVKGHLERLLLSDIVSTVMICFSPETCKSTHS 732

Query: 379  SPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQK 200
            SPWVCHFHI KE  K RRLKL SVIDAL + Y STRM    +LP+L IT KDCS A+MQK
Sbjct: 733  SPWVCHFHIDKEYVKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSAAEMQK 792

Query: 199  ENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVSR 20
              N+  CITV  VE S++S   LD LRD+VIP+LL TVIKGF  FKKVDILW++ P+ S+
Sbjct: 793  A-NSKICITVAVVETSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSK 851

Query: 19   SHFSSS 2
            S   S+
Sbjct: 852  SSRGST 857


>ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Nicotiana tomentosiformis]
          Length = 1447

 Score =  350 bits (897), Expect = 1e-93
 Identities = 187/306 (61%), Positives = 224/306 (73%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSSND 740
            LTTR+SSFS +AD+ GTL R+LMFFMRDL   YDGTVRNAYGNQ+VQFSY + D  SS  
Sbjct: 797  LTTRDSSFSGHADVSGTLNRKLMFFMRDLYSGYDGTVRNAYGNQIVQFSYYSADQISS-- 854

Query: 739  TDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGVK 560
               +++ +++A G   G PVG             ALD P+  LE SPLLNLKKILE GVK
Sbjct: 855  ---TYNRASHAIG---GHPVGSLAACAISEAAYSALDLPVGALEPSPLLNLKKILEAGVK 908

Query: 559  KSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTHG 380
             +S +KTA+LFLS++LGRW +GFEYGA+EV+ HLERLL SDIVSTV+I FSP+TC  TH 
Sbjct: 909  SNSSEKTATLFLSRRLGRWAHGFEYGAIEVKGHLERLLLSDIVSTVMICFSPETCKSTHS 968

Query: 379  SPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQK 200
            SPWVCHFHI KE  K RRLKL SVIDAL + Y STRM    +LP+L IT KDCS A+MQK
Sbjct: 969  SPWVCHFHIDKEYVKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSAAEMQK 1028

Query: 199  ENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVSR 20
              N+  CITV  VE S++S   LD LRD+VIP+LL TVIKGF  FKKVDILW++ P+ S+
Sbjct: 1029 A-NSKICITVAVVETSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSK 1087

Query: 19   SHFSSS 2
            S   S+
Sbjct: 1088 SSRGST 1093


>ref|XP_008358315.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Malus
            domestica]
          Length = 1287

 Score =  349 bits (896), Expect = 1e-93
 Identities = 185/306 (60%), Positives = 220/306 (71%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSSND 740
            +T+R+SSFS NADLPGTLTR+LMFFMRDLC  YDGTVRNAYGN++VQFSYD   ISS + 
Sbjct: 797  VTSRDSSFSGNADLPGTLTRKLMFFMRDLCTAYDGTVRNAYGNKVVQFSYD---ISSPDS 853

Query: 739  TDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGVK 560
                 D+S  AC  + GQPVG             ALDQP+S+LETSPLLNLK ILECG K
Sbjct: 854  ASTGDDESITACDGVGGQPVGSLSACAISEAAYSALDQPVSLLETSPLLNLKNILECGSK 913

Query: 559  KSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTHG 380
            KSS  +T SL+LS+KLGR  +GFEY ALEV+++LE L FSDIVSTV+I FS Q   +   
Sbjct: 914  KSSAKQTMSLYLSEKLGRHRHGFEYAALEVKNYLEGLKFSDIVSTVLIIFSSQNGSKKRF 973

Query: 379  SPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQK 200
            SPWV HFHI KE+  RRRLK+HS++++LY   NS R  LK+ L +L ITSKDCS A   K
Sbjct: 974  SPWVTHFHIGKEIVXRRRLKMHSIVNSLYARCNSARPELKAILRSLLITSKDCSEAHTCK 1033

Query: 199  ENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVSR 20
             +N  FCITVT  E  ++SS QLD  RD+VIP+LL TV+KG LE KKVDILW DQP  S+
Sbjct: 1034 GDNDXFCITVTMAENHKSSSEQLDKARDLVIPFLLETVVKGLLEVKKVDILWNDQPKRSK 1093

Query: 19   SHFSSS 2
                SS
Sbjct: 1094 VADGSS 1099


>emb|CDP09818.1| unnamed protein product [Coffea canephora]
          Length = 1511

 Score =  349 bits (895), Expect = 2e-93
 Identities = 176/301 (58%), Positives = 226/301 (75%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSSND 740
            LTTR+SSFS +AD+ GTLTR+LMFFMRDL I YDGTVRN+YGNQL+QFSY++ D  +  +
Sbjct: 853  LTTRDSSFSGHADVSGTLTRKLMFFMRDLSIGYDGTVRNSYGNQLIQFSYNSRDTLTPCN 912

Query: 739  TDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGVK 560
             +      T +   + G PVG             ALD PIS LE+SPLLNLKKIL+CGVK
Sbjct: 913  CNDESPSETISAYDVGGHPVGALAACAISEAAYSALDLPISALESSPLLNLKKILDCGVK 972

Query: 559  KSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTHG 380
            KSSGDKTAS+FL KKLGR TYG EYGALEV+ HLERL+  D+VS+ +I +S + C R+  
Sbjct: 973  KSSGDKTASIFLCKKLGRQTYGLEYGALEVKDHLERLMLEDVVSSSMISYSKEKCSRSQI 1032

Query: 379  SPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQK 200
            SPW+CHFHI KE+ KR+RL++ S+IDAL + + S +++LK NLP+LQIT K CS+A  Q 
Sbjct: 1033 SPWICHFHISKEIIKRKRLRVQSIIDALNMAWRSAKVKLKINLPDLQITGKACSLALKQN 1092

Query: 199  ENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVSR 20
            E +   C+TV+ +E S+ SS++LD LR++V+P+LLGTVIKGF EFKKVDI+WKD  N S+
Sbjct: 1093 EKDTKICLTVSILEKSKKSSLRLDILRNMVMPFLLGTVIKGFPEFKKVDIMWKDCRNSSK 1152

Query: 19   S 17
            S
Sbjct: 1153 S 1153


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  349 bits (895), Expect = 2e-93
 Identities = 184/295 (62%), Positives = 224/295 (75%), Gaps = 4/295 (1%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSS-- 746
            +T+R+SSFSDNADLPGTLTRRLMFFMRDL I YDGTVRNAYGNQLVQFSY+ E  S+   
Sbjct: 715  VTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSD 774

Query: 745  --NDTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILE 572
              N+  C++D        M GQPVG             ALDQPIS+LE SPLLNLK++LE
Sbjct: 775  GINEDTCAYD--------MGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLE 826

Query: 571  CGVKKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCG 392
            CG++KS+ D+T SLFLSKKL +  +GFEYGALEV++HLE+LLFSDIVSTV+I FSPQ   
Sbjct: 827  CGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGS 886

Query: 391  RTHGSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVA 212
            +TH SPWVCHFH+C+E+AK+R LK HS+IDALY+  NS R   K NLP+LQITSKDC V 
Sbjct: 887  KTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSKDCFV- 945

Query: 211  DMQKENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDIL 47
            DM+KE++  FCITV+ V  S+ S +QLD +RD+VIP+LLG V+KG    K  D+L
Sbjct: 946  DMEKEDSDCFCITVSIV-NSKKSCIQLDTVRDLVIPFLLGAVVKGCC-IKNSDVL 998


>ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Nicotiana sylvestris]
          Length = 1254

 Score =  348 bits (894), Expect = 3e-93
 Identities = 191/307 (62%), Positives = 222/307 (72%), Gaps = 1/307 (0%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSY-DTEDISSSN 743
            LTTR+SSFS +AD+ GTL R+LMFFMRDL I YDGTVRNAYGNQ+VQFSY +T+ I+S+ 
Sbjct: 604  LTTRDSSFSGHADVSGTLNRKLMFFMRDLYIGYDGTVRNAYGNQIVQFSYYNTDQIASTY 663

Query: 742  DTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGV 563
            +          A  A+ G PVG             ALD PI  LE SPLLNLKKILE GV
Sbjct: 664  NR---------ASHAIGGHPVGSLAACAISEAAYSALDLPIGALEPSPLLNLKKILEAGV 714

Query: 562  KKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTH 383
            K +S +KTASLFLSK+LGRW +GFEYGALEV+ HLERLL SDIVSTV+I FSP T   TH
Sbjct: 715  KSNSSEKTASLFLSKRLGRWAHGFEYGALEVKGHLERLLLSDIVSTVMICFSPGTYKSTH 774

Query: 382  GSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQ 203
             SPWVCHFHI KE  K RRLKL SVIDAL + Y STRM    +LP+L IT KDCSVA+MQ
Sbjct: 775  SSPWVCHFHIDKEYVKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSVAEMQ 834

Query: 202  KENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVS 23
            K  N+  CI V  VE S++S   LD LRD+VIP+LL TVIKGF  FKKVDILW++ P+ S
Sbjct: 835  KA-NSKICIAVAVVETSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTS 893

Query: 22   RSHFSSS 2
            +S   S+
Sbjct: 894  KSSRGST 900


>ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Nicotiana sylvestris] gi|698503797|ref|XP_009797464.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1
            isoform X1 [Nicotiana sylvestris]
            gi|698503800|ref|XP_009797465.1| PREDICTED: DNA-directed
            RNA polymerase IV subunit 1 isoform X1 [Nicotiana
            sylvestris] gi|698503802|ref|XP_009797466.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Nicotiana sylvestris] gi|698503804|ref|XP_009797467.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1
            isoform X1 [Nicotiana sylvestris]
          Length = 1447

 Score =  348 bits (894), Expect = 3e-93
 Identities = 191/307 (62%), Positives = 222/307 (72%), Gaps = 1/307 (0%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSY-DTEDISSSN 743
            LTTR+SSFS +AD+ GTL R+LMFFMRDL I YDGTVRNAYGNQ+VQFSY +T+ I+S+ 
Sbjct: 797  LTTRDSSFSGHADVSGTLNRKLMFFMRDLYIGYDGTVRNAYGNQIVQFSYYNTDQIASTY 856

Query: 742  DTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGV 563
            +          A  A+ G PVG             ALD PI  LE SPLLNLKKILE GV
Sbjct: 857  NR---------ASHAIGGHPVGSLAACAISEAAYSALDLPIGALEPSPLLNLKKILEAGV 907

Query: 562  KKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTH 383
            K +S +KTASLFLSK+LGRW +GFEYGALEV+ HLERLL SDIVSTV+I FSP T   TH
Sbjct: 908  KSNSSEKTASLFLSKRLGRWAHGFEYGALEVKGHLERLLLSDIVSTVMICFSPGTYKSTH 967

Query: 382  GSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQ 203
             SPWVCHFHI KE  K RRLKL SVIDAL + Y STRM    +LP+L IT KDCSVA+MQ
Sbjct: 968  SSPWVCHFHIDKEYVKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSVAEMQ 1027

Query: 202  KENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVS 23
            K  N+  CI V  VE S++S   LD LRD+VIP+LL TVIKGF  FKKVDILW++ P+ S
Sbjct: 1028 KA-NSKICIAVAVVETSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTS 1086

Query: 22   RSHFSSS 2
            +S   S+
Sbjct: 1087 KSSRGST 1093


>ref|XP_011014513.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Populus
            euphratica] gi|743940107|ref|XP_011014514.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like [Populus
            euphratica] gi|743940109|ref|XP_011014516.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like [Populus
            euphratica] gi|743940111|ref|XP_011014517.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like [Populus
            euphratica] gi|743940113|ref|XP_011014518.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like [Populus
            euphratica] gi|743940115|ref|XP_011014519.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like [Populus
            euphratica] gi|743940117|ref|XP_011014520.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like [Populus
            euphratica] gi|743940119|ref|XP_011014522.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like [Populus
            euphratica]
          Length = 1488

 Score =  347 bits (890), Expect = 7e-93
 Identities = 179/302 (59%), Positives = 225/302 (74%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSSND 740
            +T+R+SSFSDNADLPGTL RR+MFFMRDL   YDGTVRNAYGNQLVQFSY+ +D+  S+ 
Sbjct: 833  VTSRDSSFSDNADLPGTLFRRMMFFMRDLHGAYDGTVRNAYGNQLVQFSYNIDDMDPSS- 891

Query: 739  TDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGVK 560
               S D+     G +AG+PVG             ALDQPIS+LE SPLLNLK +LECG+K
Sbjct: 892  ---SVDEINKGDG-IAGRPVGPLAACAISEAAYSALDQPISLLEKSPLLNLKNVLECGLK 947

Query: 559  KSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTHG 380
            ++S  +T SLFLS+KLGR  +GFEY ALEVQ+HLERLLFSDIVS V I FSPQ+ GR H 
Sbjct: 948  RNSAHQTMSLFLSEKLGRQRHGFEYAALEVQNHLERLLFSDIVSFVRIIFSPQSDGRMHF 1007

Query: 379  SPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQK 200
            SPWVCHFH+ KE+ K+R LK+H +IDAL       + + K+  P +QITS+ C+VAD  K
Sbjct: 1008 SPWVCHFHVYKEIVKKRSLKMHYIIDAL-----DKQCKSKTRFPKVQITSRYCTVADTWK 1062

Query: 199  ENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVSR 20
            E   TFCITVT VE S+N  ++L+ ++D++IP+LL TVIKGF+E +KVDILW D+P + +
Sbjct: 1063 EKKETFCITVTIVETSKNEFIELETIQDLMIPFLLETVIKGFMEIRKVDILWNDKPKIPK 1122

Query: 19   SH 14
            SH
Sbjct: 1123 SH 1124


>ref|XP_011029161.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Populus
            euphratica] gi|743852096|ref|XP_011029162.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Populus
            euphratica] gi|743852100|ref|XP_011029163.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Populus
            euphratica] gi|743852104|ref|XP_011029164.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Populus
            euphratica] gi|743852108|ref|XP_011029165.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Populus
            euphratica] gi|743852112|ref|XP_011029166.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Populus
            euphratica] gi|743852116|ref|XP_011029168.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Populus
            euphratica] gi|743852120|ref|XP_011029169.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Populus
            euphratica] gi|743852124|ref|XP_011029170.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Populus
            euphratica]
          Length = 1488

 Score =  347 bits (890), Expect = 7e-93
 Identities = 179/302 (59%), Positives = 225/302 (74%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSSND 740
            +T+R+SSFSDNADLPGTL RR+MFFMRDL   YDGTVRNAYGNQLVQFSY+ +D+  S+ 
Sbjct: 833  VTSRDSSFSDNADLPGTLFRRMMFFMRDLHGAYDGTVRNAYGNQLVQFSYNIDDMDPSS- 891

Query: 739  TDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGVK 560
               S D+     G +AG+PVG             ALDQPIS+LE SPLLNLK +LECG+K
Sbjct: 892  ---SVDEINKGDG-IAGRPVGPLAACAISEAAYSALDQPISLLEKSPLLNLKNVLECGLK 947

Query: 559  KSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTHG 380
            ++S  +T SLFLS+KLGR  +GFEY ALEVQ+HLERLLFSDIVS V I FSPQ+ GR H 
Sbjct: 948  RNSAHQTMSLFLSEKLGRQRHGFEYAALEVQNHLERLLFSDIVSFVRIIFSPQSDGRMHF 1007

Query: 379  SPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQK 200
            SPWVCHFH+ KE+ K+R LK+H +IDAL       + + K+  P +QITS+ C+VAD  K
Sbjct: 1008 SPWVCHFHVYKEIVKKRSLKMHYIIDAL-----DKQCKSKTRFPKVQITSRYCTVADTWK 1062

Query: 199  ENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVSR 20
            E   TFCITVT VE S+N  ++L+ ++D++IP+LL TVIKGF+E +KVDILW D+P + +
Sbjct: 1063 EKKETFCITVTIVETSKNEFIELETIQDLMIPFLLETVIKGFMEIRKVDILWNDKPKIPK 1122

Query: 19   SH 14
            SH
Sbjct: 1123 SH 1124


>ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Solanum lycopersicum]
          Length = 1307

 Score =  347 bits (890), Expect = 7e-93
 Identities = 183/302 (60%), Positives = 223/302 (73%), Gaps = 1/302 (0%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSY-DTEDISSSN 743
            LTTR+SSFS +AD+ GTL R+LMFFMRDL + YDGTVRNAYGNQ+VQFSY + E I+S+ 
Sbjct: 662  LTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEQIASTK 721

Query: 742  DTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGV 563
             T  + +   +A G   G PVG             ALDQP+S LE+SPLLNLKKILE G 
Sbjct: 722  VTGEALESHNHAIG---GHPVGSLAACAISEAAYCALDQPVSALESSPLLNLKKILESGA 778

Query: 562  KKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTH 383
               +G+KTAS+FLSK+LGRW +GFEYGALEV+ HLERLL S++VSTV+I FSP+T   TH
Sbjct: 779  GSRTGEKTASMFLSKRLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTH 838

Query: 382  GSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQ 203
              PWVCHFHI KE  K RRLKL SV+DAL + Y +   +  ++LPNL IT KDCSVA++Q
Sbjct: 839  NCPWVCHFHIDKENVKTRRLKLRSVLDALNMRYRAATTKAGNDLPNLHITCKDCSVAEVQ 898

Query: 202  KENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVS 23
            KE  +  CITV+ VE S++ S  LD LRDVVIP+LL TVIKGF  FKKVDILWK+ P+ S
Sbjct: 899  KE-KSEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPS 957

Query: 22   RS 17
            +S
Sbjct: 958  KS 959


>ref|XP_009377912.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Pyrus x
            bretschneideri] gi|694406181|ref|XP_009377913.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1
            [Pyrus x bretschneideri]
          Length = 1466

 Score =  347 bits (890), Expect = 7e-93
 Identities = 184/306 (60%), Positives = 220/306 (71%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSSND 740
            +T+R+SSFS NADLPGTLTR+LMFFMRDLC  YDGTVRNAYGN++VQFSYD   ISS + 
Sbjct: 818  VTSRDSSFSGNADLPGTLTRKLMFFMRDLCTAYDGTVRNAYGNKVVQFSYD---ISSPDS 874

Query: 739  TDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGVK 560
                 D+S  AC  + GQPVG             ALDQP+S+LETSPLLNLK ILECG K
Sbjct: 875  ASTRDDESITACDGVGGQPVGSLSACAISEAAYSALDQPVSLLETSPLLNLKNILECGSK 934

Query: 559  KSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTHG 380
            KSS  +T SL+LS+KL R  +GFEY ALEV+++LE L FSDIVSTV+I FS Q   +   
Sbjct: 935  KSSAKQTMSLYLSEKLVRHRHGFEYAALEVKNYLEGLKFSDIVSTVLIIFSSQNGSKKRF 994

Query: 379  SPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQK 200
            SPWV HFHI KE+ +RRRLK+HS++++LY   NS R  LK+ L +L ITSKDCS A   K
Sbjct: 995  SPWVTHFHIGKEIVRRRRLKMHSIVNSLYARCNSARPELKAILRSLLITSKDCSEAHTCK 1054

Query: 199  ENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVSR 20
             +N TFCITV   E  ++SS QLD  RD+VIP+LL TV+KG LE KKVDILW DQP  S+
Sbjct: 1055 GDNDTFCITVAMAENHKSSSEQLDKARDLVIPFLLETVVKGLLEVKKVDILWNDQPKRSK 1114

Query: 19   SHFSSS 2
                SS
Sbjct: 1115 VADGSS 1120


>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Solanum lycopersicum] gi|723724576|ref|XP_010325435.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1
            isoform X1 [Solanum lycopersicum]
          Length = 1446

 Score =  347 bits (890), Expect = 7e-93
 Identities = 183/302 (60%), Positives = 223/302 (73%), Gaps = 1/302 (0%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSY-DTEDISSSN 743
            LTTR+SSFS +AD+ GTL R+LMFFMRDL + YDGTVRNAYGNQ+VQFSY + E I+S+ 
Sbjct: 801  LTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEQIASTK 860

Query: 742  DTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGV 563
             T  + +   +A G   G PVG             ALDQP+S LE+SPLLNLKKILE G 
Sbjct: 861  VTGEALESHNHAIG---GHPVGSLAACAISEAAYCALDQPVSALESSPLLNLKKILESGA 917

Query: 562  KKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTH 383
               +G+KTAS+FLSK+LGRW +GFEYGALEV+ HLERLL S++VSTV+I FSP+T   TH
Sbjct: 918  GSRTGEKTASMFLSKRLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTH 977

Query: 382  GSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQ 203
              PWVCHFHI KE  K RRLKL SV+DAL + Y +   +  ++LPNL IT KDCSVA++Q
Sbjct: 978  NCPWVCHFHIDKENVKTRRLKLRSVLDALNMRYRAATTKAGNDLPNLHITCKDCSVAEVQ 1037

Query: 202  KENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVS 23
            KE  +  CITV+ VE S++ S  LD LRDVVIP+LL TVIKGF  FKKVDILWK+ P+ S
Sbjct: 1038 KE-KSEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPS 1096

Query: 22   RS 17
            +S
Sbjct: 1097 KS 1098


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score =  347 bits (890), Expect = 7e-93
 Identities = 183/302 (60%), Positives = 223/302 (73%), Gaps = 1/302 (0%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSY-DTEDISSSN 743
            LTTR+SSFS +AD+ GTL R+LMFFMRDL + YDGTVRNAYGNQ+VQFSY + E I+S+ 
Sbjct: 493  LTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEQIASTK 552

Query: 742  DTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGV 563
             T  + +   +A G   G PVG             ALDQP+S LE+SPLLNLKKILE G 
Sbjct: 553  VTGEALESHNHAIG---GHPVGSLAACAISEAAYCALDQPVSALESSPLLNLKKILESGA 609

Query: 562  KKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTH 383
               +G+KTAS+FLSK+LGRW +GFEYGALEV+ HLERLL S++VSTV+I FSP+T   TH
Sbjct: 610  GSRTGEKTASMFLSKRLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTH 669

Query: 382  GSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQ 203
              PWVCHFHI KE  K RRLKL SV+DAL + Y +   +  ++LPNL IT KDCSVA++Q
Sbjct: 670  NCPWVCHFHIDKENVKTRRLKLRSVLDALNMRYRAATTKAGNDLPNLHITCKDCSVAEVQ 729

Query: 202  KENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVS 23
            KE  +  CITV+ VE S++ S  LD LRDVVIP+LL TVIKGF  FKKVDILWK+ P+ S
Sbjct: 730  KE-KSEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPS 788

Query: 22   RS 17
            +S
Sbjct: 789  KS 790


>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Solanum tuberosum]
          Length = 1233

 Score =  345 bits (886), Expect = 2e-92
 Identities = 183/307 (59%), Positives = 224/307 (72%), Gaps = 1/307 (0%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSY-DTEDISSSN 743
            LTTR+SSFS +AD+ GTL R+LMFFMRDL + YDGTVRNAYGNQ+VQFSY + E I+S+ 
Sbjct: 588  LTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEKIASTK 647

Query: 742  DTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGV 563
             T  + +   +A G   G PVG             ALDQP+S LE+SPLLNLKKILE G 
Sbjct: 648  GTGDALESHNHAIG---GHPVGSLAACAISEAAYSALDQPVSALESSPLLNLKKILESGA 704

Query: 562  KKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTH 383
               SG+KTAS+FLSK+LGRW +GFEYGALEV+ HLERLL S++VSTV+I FSP+T   TH
Sbjct: 705  GSRSGEKTASMFLSKRLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTH 764

Query: 382  GSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQ 203
              PWVCHFHI KE  K RRLKL S++DAL + Y +   +  ++LPNL IT KDCSVA+ +
Sbjct: 765  NCPWVCHFHIDKENVKTRRLKLRSILDALNMRYRAATTKGGNDLPNLHITCKDCSVAEAR 824

Query: 202  KENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVS 23
            KE  +  CITV+ VE S++ S  LD LRDVVIP+LL TVIKGF  FKKVDILWK+ P+ S
Sbjct: 825  KE-KSEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPS 883

Query: 22   RSHFSSS 2
            +S   S+
Sbjct: 884  KSSRGST 890


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Solanum tuberosum]
          Length = 1446

 Score =  345 bits (886), Expect = 2e-92
 Identities = 183/307 (59%), Positives = 224/307 (72%), Gaps = 1/307 (0%)
 Frame = -3

Query: 919  LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSY-DTEDISSSN 743
            LTTR+SSFS +AD+ GTL R+LMFFMRDL + YDGTVRNAYGNQ+VQFSY + E I+S+ 
Sbjct: 801  LTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEKIASTK 860

Query: 742  DTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGV 563
             T  + +   +A G   G PVG             ALDQP+S LE+SPLLNLKKILE G 
Sbjct: 861  GTGDALESHNHAIG---GHPVGSLAACAISEAAYSALDQPVSALESSPLLNLKKILESGA 917

Query: 562  KKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTH 383
               SG+KTAS+FLSK+LGRW +GFEYGALEV+ HLERLL S++VSTV+I FSP+T   TH
Sbjct: 918  GSRSGEKTASMFLSKRLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTH 977

Query: 382  GSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQ 203
              PWVCHFHI KE  K RRLKL S++DAL + Y +   +  ++LPNL IT KDCSVA+ +
Sbjct: 978  NCPWVCHFHIDKENVKTRRLKLRSILDALNMRYRAATTKGGNDLPNLHITCKDCSVAEAR 1037

Query: 202  KENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVS 23
            KE  +  CITV+ VE S++ S  LD LRDVVIP+LL TVIKGF  FKKVDILWK+ P+ S
Sbjct: 1038 KE-KSEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPS 1096

Query: 22   RSHFSSS 2
            +S   S+
Sbjct: 1097 KSSRGST 1103


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