BLASTX nr result
ID: Cornus23_contig00010397
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00010397
(921 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV su... 371 e-100
ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV su... 365 3e-98
ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV su... 365 3e-98
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun... 362 3e-97
ref|XP_008238796.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 361 4e-97
ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV su... 350 1e-93
ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV su... 350 1e-93
ref|XP_008358315.1| PREDICTED: DNA-directed RNA polymerase IV su... 349 1e-93
emb|CDP09818.1| unnamed protein product [Coffea canephora] 349 2e-93
emb|CBI34757.3| unnamed protein product [Vitis vinifera] 349 2e-93
ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV su... 348 3e-93
ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV su... 348 3e-93
ref|XP_011014513.1| PREDICTED: DNA-directed RNA polymerase IV su... 347 7e-93
ref|XP_011029161.1| PREDICTED: DNA-directed RNA polymerase IV su... 347 7e-93
ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV su... 347 7e-93
ref|XP_009377912.1| PREDICTED: DNA-directed RNA polymerase IV su... 347 7e-93
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV su... 347 7e-93
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope... 347 7e-93
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su... 345 2e-92
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 345 2e-92
>ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Vitis
vinifera]
Length = 1458
Score = 371 bits (952), Expect = e-100
Identities = 191/301 (63%), Positives = 232/301 (77%), Gaps = 4/301 (1%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSS-- 746
+T+R+SSFSDNADLPGTLTRRLMFFMRDL I YDGTVRNAYGNQLVQFSY+ E S+
Sbjct: 813 VTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSD 872
Query: 745 --NDTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILE 572
N+ C++D M GQPVG ALDQPIS+LE SPLLNLK++LE
Sbjct: 873 GINEDTCAYD--------MGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLE 924
Query: 571 CGVKKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCG 392
CG++KS+ D+T SLFLSKKL + +GFEYGALEV++HLE+LLFSDIVSTV+I FSPQ
Sbjct: 925 CGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGS 984
Query: 391 RTHGSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVA 212
+TH SPWVCHFH+C+E+AK+R LK HS+IDALY+ NS R K NLP+LQITSKDC V
Sbjct: 985 KTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSKDCFV- 1043
Query: 211 DMQKENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQP 32
DM+KE++ FCITV+ V S+ S +QLD +RD+VIP+LLG V+KG L+ KKVDILW D P
Sbjct: 1044 DMEKEDSDCFCITVSIV-NSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWNDNP 1102
Query: 31 N 29
+
Sbjct: 1103 D 1103
>ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3 [Vitis
vinifera]
Length = 1354
Score = 365 bits (936), Expect = 3e-98
Identities = 190/303 (62%), Positives = 232/303 (76%), Gaps = 6/303 (1%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSS-- 746
+T+R+SSFSDNADLPGTLTRRLMFFMRDL I YDGTVRNAYGNQLVQFSY+ E S+
Sbjct: 707 VTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSD 766
Query: 745 --NDTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILE 572
N+ C++D M GQPVG ALDQPIS+LE SPLLNLK++LE
Sbjct: 767 GINEDTCAYD--------MGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLE 818
Query: 571 CGVKKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCG 392
CG++KS+ D+T SLFLSKKL + +GFEYGALEV++HLE+LLFSDIVSTV+I FSPQ
Sbjct: 819 CGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGS 878
Query: 391 RTHGSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITS--KDCS 218
+TH SPWVCHFH+C+E+AK+R LK HS+IDALY+ NS R K NLP+LQITS +DC
Sbjct: 879 KTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSNGRDCF 938
Query: 217 VADMQKENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKD 38
V DM+KE++ FCITV+ V S+ S +QLD +RD+VIP+LLG V+KG L+ KKVDILW D
Sbjct: 939 V-DMEKEDSDCFCITVSIV-NSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWND 996
Query: 37 QPN 29
P+
Sbjct: 997 NPD 999
>ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Vitis
vinifera]
Length = 1460
Score = 365 bits (936), Expect = 3e-98
Identities = 190/303 (62%), Positives = 232/303 (76%), Gaps = 6/303 (1%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSS-- 746
+T+R+SSFSDNADLPGTLTRRLMFFMRDL I YDGTVRNAYGNQLVQFSY+ E S+
Sbjct: 813 VTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSD 872
Query: 745 --NDTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILE 572
N+ C++D M GQPVG ALDQPIS+LE SPLLNLK++LE
Sbjct: 873 GINEDTCAYD--------MGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLE 924
Query: 571 CGVKKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCG 392
CG++KS+ D+T SLFLSKKL + +GFEYGALEV++HLE+LLFSDIVSTV+I FSPQ
Sbjct: 925 CGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGS 984
Query: 391 RTHGSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITS--KDCS 218
+TH SPWVCHFH+C+E+AK+R LK HS+IDALY+ NS R K NLP+LQITS +DC
Sbjct: 985 KTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSNGRDCF 1044
Query: 217 VADMQKENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKD 38
V DM+KE++ FCITV+ V S+ S +QLD +RD+VIP+LLG V+KG L+ KKVDILW D
Sbjct: 1045 V-DMEKEDSDCFCITVSIV-NSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWND 1102
Query: 37 QPN 29
P+
Sbjct: 1103 NPD 1105
>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
gi|462406650|gb|EMJ12114.1| hypothetical protein
PRUPE_ppa000278mg [Prunus persica]
Length = 1356
Score = 362 bits (928), Expect = 3e-97
Identities = 192/306 (62%), Positives = 222/306 (72%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSSND 740
+T+R+SSFS NADLPGTLTR+LMF MRDL YDGTVRNAYGNQLVQFSYD D+ S+
Sbjct: 715 VTSRDSSFSGNADLPGTLTRKLMFLMRDLYTAYDGTVRNAYGNQLVQFSYDI-DMDKSDS 773
Query: 739 TDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGVK 560
T S ST AC + GQPVG ALDQP+S+LETSPLLNLK ILECG K
Sbjct: 774 TSTSHAKSTTACDGIGGQPVGSLSACALSEAAYSALDQPVSLLETSPLLNLKNILECGSK 833
Query: 559 KSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTHG 380
KSS +T SLFLSKKLGR +GFEYGALEV++HL L FSDIVSTV+I FS Q+ +
Sbjct: 834 KSSAKQTLSLFLSKKLGRRRHGFEYGALEVKNHLVGLTFSDIVSTVMIIFSSQSNSQKRF 893
Query: 379 SPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQK 200
SPWV HFHICKE+ ++RRLK+HSV+D+LY NS R LK L +L ITSK CS A
Sbjct: 894 SPWVTHFHICKEIVRKRRLKVHSVVDSLYARCNSARPELKIVLRSLLITSKGCSAAQTCN 953
Query: 199 ENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVSR 20
++ TFCITVT E S+NSS QLD RD+VIP+LLGTV+KGFLE KKVDILW D P S+
Sbjct: 954 GDDDTFCITVTMPENSKNSSEQLDIARDLVIPFLLGTVVKGFLEVKKVDILWNDHPRESK 1013
Query: 19 SHFSSS 2
SS
Sbjct: 1014 KIHGSS 1019
>ref|XP_008238796.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase IV
subunit 1 [Prunus mume]
Length = 1452
Score = 361 bits (927), Expect = 4e-97
Identities = 191/306 (62%), Positives = 222/306 (72%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSSND 740
+T+R+SSFS NADLPGTLTR+LMF MRDL YDGTVRNAYGNQLVQFSYD D+ S+
Sbjct: 808 VTSRDSSFSGNADLPGTLTRKLMFLMRDLYTAYDGTVRNAYGNQLVQFSYDI-DMDKSDS 866
Query: 739 TDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGVK 560
T S+ ST AC + GQPVG ALDQP+S+LETSPLLNLK ILECG K
Sbjct: 867 TSTSYAKSTTACDGIGGQPVGSLSACALSEAAYSALDQPVSLLETSPLLNLKNILECGSK 926
Query: 559 KSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTHG 380
KSS +T SLFLS+KLGR +GFEYGALEV++HL L FSDIVSTV+I FS Q +
Sbjct: 927 KSSAKQTMSLFLSEKLGRRRHGFEYGALEVKNHLVGLTFSDIVSTVMIIFSSQNNSQKRF 986
Query: 379 SPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQK 200
SPWV HFHICKE+ ++RRLK+HSV+D+LY NS R LK L +L ITSK CS A
Sbjct: 987 SPWVTHFHICKEIVRKRRLKVHSVVDSLYARCNSARPELKVVLRSLLITSKGCSAAQTCN 1046
Query: 199 ENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVSR 20
++ TFCITVT E S+NSS QLD RD+VIP+LLGTV+KGFLE KKVDILW D P S+
Sbjct: 1047 GDDDTFCITVTMPENSKNSSEQLDIARDLVIPFLLGTVVKGFLEVKKVDILWNDHPRESK 1106
Query: 19 SHFSSS 2
SS
Sbjct: 1107 KIHGSS 1112
>ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Nicotiana tomentosiformis]
Length = 1211
Score = 350 bits (897), Expect = 1e-93
Identities = 187/306 (61%), Positives = 224/306 (73%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSSND 740
LTTR+SSFS +AD+ GTL R+LMFFMRDL YDGTVRNAYGNQ+VQFSY + D SS
Sbjct: 561 LTTRDSSFSGHADVSGTLNRKLMFFMRDLYSGYDGTVRNAYGNQIVQFSYYSADQISS-- 618
Query: 739 TDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGVK 560
+++ +++A G G PVG ALD P+ LE SPLLNLKKILE GVK
Sbjct: 619 ---TYNRASHAIG---GHPVGSLAACAISEAAYSALDLPVGALEPSPLLNLKKILEAGVK 672
Query: 559 KSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTHG 380
+S +KTA+LFLS++LGRW +GFEYGA+EV+ HLERLL SDIVSTV+I FSP+TC TH
Sbjct: 673 SNSSEKTATLFLSRRLGRWAHGFEYGAIEVKGHLERLLLSDIVSTVMICFSPETCKSTHS 732
Query: 379 SPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQK 200
SPWVCHFHI KE K RRLKL SVIDAL + Y STRM +LP+L IT KDCS A+MQK
Sbjct: 733 SPWVCHFHIDKEYVKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSAAEMQK 792
Query: 199 ENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVSR 20
N+ CITV VE S++S LD LRD+VIP+LL TVIKGF FKKVDILW++ P+ S+
Sbjct: 793 A-NSKICITVAVVETSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSK 851
Query: 19 SHFSSS 2
S S+
Sbjct: 852 SSRGST 857
>ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana tomentosiformis]
Length = 1447
Score = 350 bits (897), Expect = 1e-93
Identities = 187/306 (61%), Positives = 224/306 (73%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSSND 740
LTTR+SSFS +AD+ GTL R+LMFFMRDL YDGTVRNAYGNQ+VQFSY + D SS
Sbjct: 797 LTTRDSSFSGHADVSGTLNRKLMFFMRDLYSGYDGTVRNAYGNQIVQFSYYSADQISS-- 854
Query: 739 TDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGVK 560
+++ +++A G G PVG ALD P+ LE SPLLNLKKILE GVK
Sbjct: 855 ---TYNRASHAIG---GHPVGSLAACAISEAAYSALDLPVGALEPSPLLNLKKILEAGVK 908
Query: 559 KSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTHG 380
+S +KTA+LFLS++LGRW +GFEYGA+EV+ HLERLL SDIVSTV+I FSP+TC TH
Sbjct: 909 SNSSEKTATLFLSRRLGRWAHGFEYGAIEVKGHLERLLLSDIVSTVMICFSPETCKSTHS 968
Query: 379 SPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQK 200
SPWVCHFHI KE K RRLKL SVIDAL + Y STRM +LP+L IT KDCS A+MQK
Sbjct: 969 SPWVCHFHIDKEYVKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSAAEMQK 1028
Query: 199 ENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVSR 20
N+ CITV VE S++S LD LRD+VIP+LL TVIKGF FKKVDILW++ P+ S+
Sbjct: 1029 A-NSKICITVAVVETSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSK 1087
Query: 19 SHFSSS 2
S S+
Sbjct: 1088 SSRGST 1093
>ref|XP_008358315.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Malus
domestica]
Length = 1287
Score = 349 bits (896), Expect = 1e-93
Identities = 185/306 (60%), Positives = 220/306 (71%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSSND 740
+T+R+SSFS NADLPGTLTR+LMFFMRDLC YDGTVRNAYGN++VQFSYD ISS +
Sbjct: 797 VTSRDSSFSGNADLPGTLTRKLMFFMRDLCTAYDGTVRNAYGNKVVQFSYD---ISSPDS 853
Query: 739 TDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGVK 560
D+S AC + GQPVG ALDQP+S+LETSPLLNLK ILECG K
Sbjct: 854 ASTGDDESITACDGVGGQPVGSLSACAISEAAYSALDQPVSLLETSPLLNLKNILECGSK 913
Query: 559 KSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTHG 380
KSS +T SL+LS+KLGR +GFEY ALEV+++LE L FSDIVSTV+I FS Q +
Sbjct: 914 KSSAKQTMSLYLSEKLGRHRHGFEYAALEVKNYLEGLKFSDIVSTVLIIFSSQNGSKKRF 973
Query: 379 SPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQK 200
SPWV HFHI KE+ RRRLK+HS++++LY NS R LK+ L +L ITSKDCS A K
Sbjct: 974 SPWVTHFHIGKEIVXRRRLKMHSIVNSLYARCNSARPELKAILRSLLITSKDCSEAHTCK 1033
Query: 199 ENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVSR 20
+N FCITVT E ++SS QLD RD+VIP+LL TV+KG LE KKVDILW DQP S+
Sbjct: 1034 GDNDXFCITVTMAENHKSSSEQLDKARDLVIPFLLETVVKGLLEVKKVDILWNDQPKRSK 1093
Query: 19 SHFSSS 2
SS
Sbjct: 1094 VADGSS 1099
>emb|CDP09818.1| unnamed protein product [Coffea canephora]
Length = 1511
Score = 349 bits (895), Expect = 2e-93
Identities = 176/301 (58%), Positives = 226/301 (75%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSSND 740
LTTR+SSFS +AD+ GTLTR+LMFFMRDL I YDGTVRN+YGNQL+QFSY++ D + +
Sbjct: 853 LTTRDSSFSGHADVSGTLTRKLMFFMRDLSIGYDGTVRNSYGNQLIQFSYNSRDTLTPCN 912
Query: 739 TDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGVK 560
+ T + + G PVG ALD PIS LE+SPLLNLKKIL+CGVK
Sbjct: 913 CNDESPSETISAYDVGGHPVGALAACAISEAAYSALDLPISALESSPLLNLKKILDCGVK 972
Query: 559 KSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTHG 380
KSSGDKTAS+FL KKLGR TYG EYGALEV+ HLERL+ D+VS+ +I +S + C R+
Sbjct: 973 KSSGDKTASIFLCKKLGRQTYGLEYGALEVKDHLERLMLEDVVSSSMISYSKEKCSRSQI 1032
Query: 379 SPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQK 200
SPW+CHFHI KE+ KR+RL++ S+IDAL + + S +++LK NLP+LQIT K CS+A Q
Sbjct: 1033 SPWICHFHISKEIIKRKRLRVQSIIDALNMAWRSAKVKLKINLPDLQITGKACSLALKQN 1092
Query: 199 ENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVSR 20
E + C+TV+ +E S+ SS++LD LR++V+P+LLGTVIKGF EFKKVDI+WKD N S+
Sbjct: 1093 EKDTKICLTVSILEKSKKSSLRLDILRNMVMPFLLGTVIKGFPEFKKVDIMWKDCRNSSK 1152
Query: 19 S 17
S
Sbjct: 1153 S 1153
>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
Length = 1359
Score = 349 bits (895), Expect = 2e-93
Identities = 184/295 (62%), Positives = 224/295 (75%), Gaps = 4/295 (1%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSS-- 746
+T+R+SSFSDNADLPGTLTRRLMFFMRDL I YDGTVRNAYGNQLVQFSY+ E S+
Sbjct: 715 VTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSD 774
Query: 745 --NDTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILE 572
N+ C++D M GQPVG ALDQPIS+LE SPLLNLK++LE
Sbjct: 775 GINEDTCAYD--------MGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLE 826
Query: 571 CGVKKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCG 392
CG++KS+ D+T SLFLSKKL + +GFEYGALEV++HLE+LLFSDIVSTV+I FSPQ
Sbjct: 827 CGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGS 886
Query: 391 RTHGSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVA 212
+TH SPWVCHFH+C+E+AK+R LK HS+IDALY+ NS R K NLP+LQITSKDC V
Sbjct: 887 KTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSKDCFV- 945
Query: 211 DMQKENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDIL 47
DM+KE++ FCITV+ V S+ S +QLD +RD+VIP+LLG V+KG K D+L
Sbjct: 946 DMEKEDSDCFCITVSIV-NSKKSCIQLDTVRDLVIPFLLGAVVKGCC-IKNSDVL 998
>ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Nicotiana sylvestris]
Length = 1254
Score = 348 bits (894), Expect = 3e-93
Identities = 191/307 (62%), Positives = 222/307 (72%), Gaps = 1/307 (0%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSY-DTEDISSSN 743
LTTR+SSFS +AD+ GTL R+LMFFMRDL I YDGTVRNAYGNQ+VQFSY +T+ I+S+
Sbjct: 604 LTTRDSSFSGHADVSGTLNRKLMFFMRDLYIGYDGTVRNAYGNQIVQFSYYNTDQIASTY 663
Query: 742 DTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGV 563
+ A A+ G PVG ALD PI LE SPLLNLKKILE GV
Sbjct: 664 NR---------ASHAIGGHPVGSLAACAISEAAYSALDLPIGALEPSPLLNLKKILEAGV 714
Query: 562 KKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTH 383
K +S +KTASLFLSK+LGRW +GFEYGALEV+ HLERLL SDIVSTV+I FSP T TH
Sbjct: 715 KSNSSEKTASLFLSKRLGRWAHGFEYGALEVKGHLERLLLSDIVSTVMICFSPGTYKSTH 774
Query: 382 GSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQ 203
SPWVCHFHI KE K RRLKL SVIDAL + Y STRM +LP+L IT KDCSVA+MQ
Sbjct: 775 SSPWVCHFHIDKEYVKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSVAEMQ 834
Query: 202 KENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVS 23
K N+ CI V VE S++S LD LRD+VIP+LL TVIKGF FKKVDILW++ P+ S
Sbjct: 835 KA-NSKICIAVAVVETSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTS 893
Query: 22 RSHFSSS 2
+S S+
Sbjct: 894 KSSRGST 900
>ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana sylvestris] gi|698503797|ref|XP_009797464.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Nicotiana sylvestris]
gi|698503800|ref|XP_009797465.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1 isoform X1 [Nicotiana
sylvestris] gi|698503802|ref|XP_009797466.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana sylvestris] gi|698503804|ref|XP_009797467.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Nicotiana sylvestris]
Length = 1447
Score = 348 bits (894), Expect = 3e-93
Identities = 191/307 (62%), Positives = 222/307 (72%), Gaps = 1/307 (0%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSY-DTEDISSSN 743
LTTR+SSFS +AD+ GTL R+LMFFMRDL I YDGTVRNAYGNQ+VQFSY +T+ I+S+
Sbjct: 797 LTTRDSSFSGHADVSGTLNRKLMFFMRDLYIGYDGTVRNAYGNQIVQFSYYNTDQIASTY 856
Query: 742 DTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGV 563
+ A A+ G PVG ALD PI LE SPLLNLKKILE GV
Sbjct: 857 NR---------ASHAIGGHPVGSLAACAISEAAYSALDLPIGALEPSPLLNLKKILEAGV 907
Query: 562 KKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTH 383
K +S +KTASLFLSK+LGRW +GFEYGALEV+ HLERLL SDIVSTV+I FSP T TH
Sbjct: 908 KSNSSEKTASLFLSKRLGRWAHGFEYGALEVKGHLERLLLSDIVSTVMICFSPGTYKSTH 967
Query: 382 GSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQ 203
SPWVCHFHI KE K RRLKL SVIDAL + Y STRM +LP+L IT KDCSVA+MQ
Sbjct: 968 SSPWVCHFHIDKEYVKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSVAEMQ 1027
Query: 202 KENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVS 23
K N+ CI V VE S++S LD LRD+VIP+LL TVIKGF FKKVDILW++ P+ S
Sbjct: 1028 KA-NSKICIAVAVVETSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTS 1086
Query: 22 RSHFSSS 2
+S S+
Sbjct: 1087 KSSRGST 1093
>ref|XP_011014513.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Populus
euphratica] gi|743940107|ref|XP_011014514.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like [Populus
euphratica] gi|743940109|ref|XP_011014516.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like [Populus
euphratica] gi|743940111|ref|XP_011014517.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like [Populus
euphratica] gi|743940113|ref|XP_011014518.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like [Populus
euphratica] gi|743940115|ref|XP_011014519.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like [Populus
euphratica] gi|743940117|ref|XP_011014520.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like [Populus
euphratica] gi|743940119|ref|XP_011014522.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like [Populus
euphratica]
Length = 1488
Score = 347 bits (890), Expect = 7e-93
Identities = 179/302 (59%), Positives = 225/302 (74%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSSND 740
+T+R+SSFSDNADLPGTL RR+MFFMRDL YDGTVRNAYGNQLVQFSY+ +D+ S+
Sbjct: 833 VTSRDSSFSDNADLPGTLFRRMMFFMRDLHGAYDGTVRNAYGNQLVQFSYNIDDMDPSS- 891
Query: 739 TDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGVK 560
S D+ G +AG+PVG ALDQPIS+LE SPLLNLK +LECG+K
Sbjct: 892 ---SVDEINKGDG-IAGRPVGPLAACAISEAAYSALDQPISLLEKSPLLNLKNVLECGLK 947
Query: 559 KSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTHG 380
++S +T SLFLS+KLGR +GFEY ALEVQ+HLERLLFSDIVS V I FSPQ+ GR H
Sbjct: 948 RNSAHQTMSLFLSEKLGRQRHGFEYAALEVQNHLERLLFSDIVSFVRIIFSPQSDGRMHF 1007
Query: 379 SPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQK 200
SPWVCHFH+ KE+ K+R LK+H +IDAL + + K+ P +QITS+ C+VAD K
Sbjct: 1008 SPWVCHFHVYKEIVKKRSLKMHYIIDAL-----DKQCKSKTRFPKVQITSRYCTVADTWK 1062
Query: 199 ENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVSR 20
E TFCITVT VE S+N ++L+ ++D++IP+LL TVIKGF+E +KVDILW D+P + +
Sbjct: 1063 EKKETFCITVTIVETSKNEFIELETIQDLMIPFLLETVIKGFMEIRKVDILWNDKPKIPK 1122
Query: 19 SH 14
SH
Sbjct: 1123 SH 1124
>ref|XP_011029161.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Populus
euphratica] gi|743852096|ref|XP_011029162.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Populus
euphratica] gi|743852100|ref|XP_011029163.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Populus
euphratica] gi|743852104|ref|XP_011029164.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Populus
euphratica] gi|743852108|ref|XP_011029165.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Populus
euphratica] gi|743852112|ref|XP_011029166.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Populus
euphratica] gi|743852116|ref|XP_011029168.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Populus
euphratica] gi|743852120|ref|XP_011029169.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Populus
euphratica] gi|743852124|ref|XP_011029170.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Populus
euphratica]
Length = 1488
Score = 347 bits (890), Expect = 7e-93
Identities = 179/302 (59%), Positives = 225/302 (74%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSSND 740
+T+R+SSFSDNADLPGTL RR+MFFMRDL YDGTVRNAYGNQLVQFSY+ +D+ S+
Sbjct: 833 VTSRDSSFSDNADLPGTLFRRMMFFMRDLHGAYDGTVRNAYGNQLVQFSYNIDDMDPSS- 891
Query: 739 TDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGVK 560
S D+ G +AG+PVG ALDQPIS+LE SPLLNLK +LECG+K
Sbjct: 892 ---SVDEINKGDG-IAGRPVGPLAACAISEAAYSALDQPISLLEKSPLLNLKNVLECGLK 947
Query: 559 KSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTHG 380
++S +T SLFLS+KLGR +GFEY ALEVQ+HLERLLFSDIVS V I FSPQ+ GR H
Sbjct: 948 RNSAHQTMSLFLSEKLGRQRHGFEYAALEVQNHLERLLFSDIVSFVRIIFSPQSDGRMHF 1007
Query: 379 SPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQK 200
SPWVCHFH+ KE+ K+R LK+H +IDAL + + K+ P +QITS+ C+VAD K
Sbjct: 1008 SPWVCHFHVYKEIVKKRSLKMHYIIDAL-----DKQCKSKTRFPKVQITSRYCTVADTWK 1062
Query: 199 ENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVSR 20
E TFCITVT VE S+N ++L+ ++D++IP+LL TVIKGF+E +KVDILW D+P + +
Sbjct: 1063 EKKETFCITVTIVETSKNEFIELETIQDLMIPFLLETVIKGFMEIRKVDILWNDKPKIPK 1122
Query: 19 SH 14
SH
Sbjct: 1123 SH 1124
>ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Solanum lycopersicum]
Length = 1307
Score = 347 bits (890), Expect = 7e-93
Identities = 183/302 (60%), Positives = 223/302 (73%), Gaps = 1/302 (0%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSY-DTEDISSSN 743
LTTR+SSFS +AD+ GTL R+LMFFMRDL + YDGTVRNAYGNQ+VQFSY + E I+S+
Sbjct: 662 LTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEQIASTK 721
Query: 742 DTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGV 563
T + + +A G G PVG ALDQP+S LE+SPLLNLKKILE G
Sbjct: 722 VTGEALESHNHAIG---GHPVGSLAACAISEAAYCALDQPVSALESSPLLNLKKILESGA 778
Query: 562 KKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTH 383
+G+KTAS+FLSK+LGRW +GFEYGALEV+ HLERLL S++VSTV+I FSP+T TH
Sbjct: 779 GSRTGEKTASMFLSKRLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTH 838
Query: 382 GSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQ 203
PWVCHFHI KE K RRLKL SV+DAL + Y + + ++LPNL IT KDCSVA++Q
Sbjct: 839 NCPWVCHFHIDKENVKTRRLKLRSVLDALNMRYRAATTKAGNDLPNLHITCKDCSVAEVQ 898
Query: 202 KENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVS 23
KE + CITV+ VE S++ S LD LRDVVIP+LL TVIKGF FKKVDILWK+ P+ S
Sbjct: 899 KE-KSEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPS 957
Query: 22 RS 17
+S
Sbjct: 958 KS 959
>ref|XP_009377912.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Pyrus x
bretschneideri] gi|694406181|ref|XP_009377913.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
[Pyrus x bretschneideri]
Length = 1466
Score = 347 bits (890), Expect = 7e-93
Identities = 184/306 (60%), Positives = 220/306 (71%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSYDTEDISSSND 740
+T+R+SSFS NADLPGTLTR+LMFFMRDLC YDGTVRNAYGN++VQFSYD ISS +
Sbjct: 818 VTSRDSSFSGNADLPGTLTRKLMFFMRDLCTAYDGTVRNAYGNKVVQFSYD---ISSPDS 874
Query: 739 TDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGVK 560
D+S AC + GQPVG ALDQP+S+LETSPLLNLK ILECG K
Sbjct: 875 ASTRDDESITACDGVGGQPVGSLSACAISEAAYSALDQPVSLLETSPLLNLKNILECGSK 934
Query: 559 KSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTHG 380
KSS +T SL+LS+KL R +GFEY ALEV+++LE L FSDIVSTV+I FS Q +
Sbjct: 935 KSSAKQTMSLYLSEKLVRHRHGFEYAALEVKNYLEGLKFSDIVSTVLIIFSSQNGSKKRF 994
Query: 379 SPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQK 200
SPWV HFHI KE+ +RRRLK+HS++++LY NS R LK+ L +L ITSKDCS A K
Sbjct: 995 SPWVTHFHIGKEIVRRRRLKMHSIVNSLYARCNSARPELKAILRSLLITSKDCSEAHTCK 1054
Query: 199 ENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVSR 20
+N TFCITV E ++SS QLD RD+VIP+LL TV+KG LE KKVDILW DQP S+
Sbjct: 1055 GDNDTFCITVAMAENHKSSSEQLDKARDLVIPFLLETVVKGLLEVKKVDILWNDQPKRSK 1114
Query: 19 SHFSSS 2
SS
Sbjct: 1115 VADGSS 1120
>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Solanum lycopersicum] gi|723724576|ref|XP_010325435.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Solanum lycopersicum]
Length = 1446
Score = 347 bits (890), Expect = 7e-93
Identities = 183/302 (60%), Positives = 223/302 (73%), Gaps = 1/302 (0%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSY-DTEDISSSN 743
LTTR+SSFS +AD+ GTL R+LMFFMRDL + YDGTVRNAYGNQ+VQFSY + E I+S+
Sbjct: 801 LTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEQIASTK 860
Query: 742 DTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGV 563
T + + +A G G PVG ALDQP+S LE+SPLLNLKKILE G
Sbjct: 861 VTGEALESHNHAIG---GHPVGSLAACAISEAAYCALDQPVSALESSPLLNLKKILESGA 917
Query: 562 KKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTH 383
+G+KTAS+FLSK+LGRW +GFEYGALEV+ HLERLL S++VSTV+I FSP+T TH
Sbjct: 918 GSRTGEKTASMFLSKRLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTH 977
Query: 382 GSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQ 203
PWVCHFHI KE K RRLKL SV+DAL + Y + + ++LPNL IT KDCSVA++Q
Sbjct: 978 NCPWVCHFHIDKENVKTRRLKLRSVLDALNMRYRAATTKAGNDLPNLHITCKDCSVAEVQ 1037
Query: 202 KENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVS 23
KE + CITV+ VE S++ S LD LRDVVIP+LL TVIKGF FKKVDILWK+ P+ S
Sbjct: 1038 KE-KSEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPS 1096
Query: 22 RS 17
+S
Sbjct: 1097 KS 1098
>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
Length = 1138
Score = 347 bits (890), Expect = 7e-93
Identities = 183/302 (60%), Positives = 223/302 (73%), Gaps = 1/302 (0%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSY-DTEDISSSN 743
LTTR+SSFS +AD+ GTL R+LMFFMRDL + YDGTVRNAYGNQ+VQFSY + E I+S+
Sbjct: 493 LTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEQIASTK 552
Query: 742 DTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGV 563
T + + +A G G PVG ALDQP+S LE+SPLLNLKKILE G
Sbjct: 553 VTGEALESHNHAIG---GHPVGSLAACAISEAAYCALDQPVSALESSPLLNLKKILESGA 609
Query: 562 KKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTH 383
+G+KTAS+FLSK+LGRW +GFEYGALEV+ HLERLL S++VSTV+I FSP+T TH
Sbjct: 610 GSRTGEKTASMFLSKRLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTH 669
Query: 382 GSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQ 203
PWVCHFHI KE K RRLKL SV+DAL + Y + + ++LPNL IT KDCSVA++Q
Sbjct: 670 NCPWVCHFHIDKENVKTRRLKLRSVLDALNMRYRAATTKAGNDLPNLHITCKDCSVAEVQ 729
Query: 202 KENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVS 23
KE + CITV+ VE S++ S LD LRDVVIP+LL TVIKGF FKKVDILWK+ P+ S
Sbjct: 730 KE-KSEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPS 788
Query: 22 RS 17
+S
Sbjct: 789 KS 790
>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Solanum tuberosum]
Length = 1233
Score = 345 bits (886), Expect = 2e-92
Identities = 183/307 (59%), Positives = 224/307 (72%), Gaps = 1/307 (0%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSY-DTEDISSSN 743
LTTR+SSFS +AD+ GTL R+LMFFMRDL + YDGTVRNAYGNQ+VQFSY + E I+S+
Sbjct: 588 LTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEKIASTK 647
Query: 742 DTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGV 563
T + + +A G G PVG ALDQP+S LE+SPLLNLKKILE G
Sbjct: 648 GTGDALESHNHAIG---GHPVGSLAACAISEAAYSALDQPVSALESSPLLNLKKILESGA 704
Query: 562 KKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTH 383
SG+KTAS+FLSK+LGRW +GFEYGALEV+ HLERLL S++VSTV+I FSP+T TH
Sbjct: 705 GSRSGEKTASMFLSKRLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTH 764
Query: 382 GSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQ 203
PWVCHFHI KE K RRLKL S++DAL + Y + + ++LPNL IT KDCSVA+ +
Sbjct: 765 NCPWVCHFHIDKENVKTRRLKLRSILDALNMRYRAATTKGGNDLPNLHITCKDCSVAEAR 824
Query: 202 KENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVS 23
KE + CITV+ VE S++ S LD LRDVVIP+LL TVIKGF FKKVDILWK+ P+ S
Sbjct: 825 KE-KSEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPS 883
Query: 22 RSHFSSS 2
+S S+
Sbjct: 884 KSSRGST 890
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Solanum tuberosum]
Length = 1446
Score = 345 bits (886), Expect = 2e-92
Identities = 183/307 (59%), Positives = 224/307 (72%), Gaps = 1/307 (0%)
Frame = -3
Query: 919 LTTRNSSFSDNADLPGTLTRRLMFFMRDLCIVYDGTVRNAYGNQLVQFSY-DTEDISSSN 743
LTTR+SSFS +AD+ GTL R+LMFFMRDL + YDGTVRNAYGNQ+VQFSY + E I+S+
Sbjct: 801 LTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEKIASTK 860
Query: 742 DTDCSFDDSTYACGAMAGQPVGXXXXXXXXXXXXXALDQPISVLETSPLLNLKKILECGV 563
T + + +A G G PVG ALDQP+S LE+SPLLNLKKILE G
Sbjct: 861 GTGDALESHNHAIG---GHPVGSLAACAISEAAYSALDQPVSALESSPLLNLKKILESGA 917
Query: 562 KKSSGDKTASLFLSKKLGRWTYGFEYGALEVQSHLERLLFSDIVSTVIIFFSPQTCGRTH 383
SG+KTAS+FLSK+LGRW +GFEYGALEV+ HLERLL S++VSTV+I FSP+T TH
Sbjct: 918 GSRSGEKTASMFLSKRLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTH 977
Query: 382 GSPWVCHFHICKEMAKRRRLKLHSVIDALYVNYNSTRMRLKSNLPNLQITSKDCSVADMQ 203
PWVCHFHI KE K RRLKL S++DAL + Y + + ++LPNL IT KDCSVA+ +
Sbjct: 978 NCPWVCHFHIDKENVKTRRLKLRSILDALNMRYRAATTKGGNDLPNLHITCKDCSVAEAR 1037
Query: 202 KENNATFCITVTAVEGSRNSSVQLDNLRDVVIPYLLGTVIKGFLEFKKVDILWKDQPNVS 23
KE + CITV+ VE S++ S LD LRDVVIP+LL TVIKGF FKKVDILWK+ P+ S
Sbjct: 1038 KE-KSEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPS 1096
Query: 22 RSHFSSS 2
+S S+
Sbjct: 1097 KSSRGST 1103