BLASTX nr result

ID: Cornus23_contig00010042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00010042
         (845 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013699633.1| PREDICTED: uncharacterized protein LOC106403...    49   8e-06

>ref|XP_013699633.1| PREDICTED: uncharacterized protein LOC106403339 [Brassica napus]
          Length = 1455

 Score = 48.9 bits (115), Expect(2) = 8e-06
 Identities = 27/68 (39%), Positives = 38/68 (55%)
 Frame = -3

Query: 207  SARKLTKALYDFSLSSGLTLNNEKSPIIFSAATRRGRRRITQLFDCKIGVFPVTYLGLPL 28
            S   + K L+DFSL SGLT+N  K+ +     T      +T L   K+G  P+ YLGLPL
Sbjct: 952  SLENIAKTLHDFSLWSGLTMNQSKTDLFTGGLTLDETNDLTSL-GFKLGSLPIPYLGLPL 1010

Query: 27   ITQGLKKG 4
            + + L+ G
Sbjct: 1011 MHRKLRIG 1018



 Score = 28.9 bits (63), Expect(2) = 8e-06
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -1

Query: 359  VLVTEVFSTSLSRLVQTGDVQISKSVSRAGLNISHMFFADNLLI 228
            VLV EVF   L +    G + +  S S+    ++H+ FAD++++
Sbjct: 903  VLVMEVFCQMLKKNFSNGSIGLHPSASQP--QVTHLSFADDIMV 944


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