BLASTX nr result
ID: Cornus23_contig00010002
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00010002
(648 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011042176.1| PREDICTED: glycine-rich RNA-binding protein ... 68 4e-09
ref|XP_011003619.1| PREDICTED: glycine-rich RNA-binding protein ... 67 1e-08
ref|XP_011003618.1| PREDICTED: glycine-rich RNA-binding protein ... 67 1e-08
ref|XP_006388123.1| glycine-rich RNA-binding family protein [Pop... 67 1e-08
gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sa... 67 1e-08
ref|XP_006388124.1| hypothetical protein POPTR_0323s00210g [Popu... 67 1e-08
ref|XP_004502236.1| PREDICTED: glycine-rich RNA-binding protein ... 67 1e-08
ref|XP_006373086.1| glycine-rich RNA-binding family protein [Pop... 67 1e-08
ref|XP_010909658.1| PREDICTED: glycine-rich RNA-binding protein ... 66 2e-08
ref|XP_010909657.1| PREDICTED: glycine-rich RNA-binding protein ... 66 2e-08
ref|XP_010905146.1| PREDICTED: glycine-rich RNA-binding protein ... 66 2e-08
ref|XP_007163819.1| hypothetical protein PHAVU_001G267100g [Phas... 66 2e-08
ref|XP_009396794.1| PREDICTED: glycine-rich RNA-binding protein ... 66 2e-08
ref|XP_012071090.1| PREDICTED: glycine-rich RNA-binding protein ... 65 3e-08
ref|XP_008794650.1| PREDICTED: glycine-rich RNA-binding protein ... 65 3e-08
ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [... 65 3e-08
gb|AFK48773.1| unknown [Lotus japonicus] 65 3e-08
gb|AFK47118.1| unknown [Lotus japonicus] 65 3e-08
ref|XP_010909659.1| PREDICTED: glycine-rich RNA-binding protein ... 65 4e-08
ref|XP_003601657.1| RNA-binding (RRM/RBD/RNP motif) family prote... 65 4e-08
>ref|XP_011042176.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Populus euphratica] gi|743897764|ref|XP_011042177.1|
PREDICTED: glycine-rich RNA-binding protein 2,
mitochondrial-like [Populus euphratica]
Length = 131
Score = 68.2 bits (165), Expect = 4e-09
Identities = 34/54 (62%), Positives = 38/54 (70%)
Frame = -1
Query: 450 ARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDRQQP 289
ARVI DR+TG SRGFGFV + AMDGQ LGGRNIRVSYA D++QP
Sbjct: 65 ARVITDRDTGRSRGFGFVSYESTESASEALSAMDGQELGGRNIRVSYATDKRQP 118
>ref|XP_011003619.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
isoform X2 [Populus euphratica]
gi|743941220|ref|XP_011015094.1| PREDICTED: glycine-rich
RNA-binding protein 2, mitochondrial-like [Populus
euphratica]
Length = 134
Score = 66.6 bits (161), Expect = 1e-08
Identities = 33/56 (58%), Positives = 38/56 (67%)
Frame = -1
Query: 450 ARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDRQQPAR 283
ARVI DRETG SRGFGFV + AMDGQ LGGRN+RVS+A +R +P R
Sbjct: 65 ARVIMDRETGRSRGFGFVSYDSSESASEALSAMDGQELGGRNVRVSFAEERSRPPR 120
>ref|XP_011003618.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Populus euphratica]
Length = 146
Score = 66.6 bits (161), Expect = 1e-08
Identities = 33/56 (58%), Positives = 38/56 (67%)
Frame = -1
Query: 450 ARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDRQQPAR 283
ARVI DRETG SRGFGFV + AMDGQ LGGRN+RVS+A +R +P R
Sbjct: 65 ARVIMDRETGRSRGFGFVSYDSSESASEALSAMDGQELGGRNVRVSFAEERSRPPR 120
>ref|XP_006388123.1| glycine-rich RNA-binding family protein [Populus trichocarpa]
gi|550309537|gb|ERP47037.1| glycine-rich RNA-binding
family protein [Populus trichocarpa]
Length = 112
Score = 66.6 bits (161), Expect = 1e-08
Identities = 33/56 (58%), Positives = 38/56 (67%)
Frame = -1
Query: 450 ARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDRQQPAR 283
ARVI DRETG SRGFGFV + AMDGQ LGGRN+RVS+A +R +P R
Sbjct: 43 ARVIMDRETGRSRGFGFVSYDSSESASEAQSAMDGQELGGRNVRVSFAEERSRPPR 98
>gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding
protein [Pisum sativum]
Length = 146
Score = 66.6 bits (161), Expect = 1e-08
Identities = 35/56 (62%), Positives = 37/56 (66%)
Frame = -1
Query: 450 ARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDRQQPAR 283
ARVI DR+TG SRGFGFV+F AMDGQ L GRNIRVSYANDR R
Sbjct: 65 ARVITDRDTGRSRGFGFVNFTSDESATSALSAMDGQDLNGRNIRVSYANDRPSAPR 120
>ref|XP_006388124.1| hypothetical protein POPTR_0323s00210g [Populus trichocarpa]
gi|550309538|gb|ERP47038.1| hypothetical protein
POPTR_0323s00210g [Populus trichocarpa]
Length = 134
Score = 66.6 bits (161), Expect = 1e-08
Identities = 33/56 (58%), Positives = 38/56 (67%)
Frame = -1
Query: 450 ARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDRQQPAR 283
ARVI DRETG SRGFGFV + AMDGQ LGGRN+RVS+A +R +P R
Sbjct: 65 ARVIMDRETGRSRGFGFVSYDSSESASEAQSAMDGQELGGRNVRVSFAEERSRPPR 120
>ref|XP_004502236.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cicer arietinum]
Length = 146
Score = 66.6 bits (161), Expect = 1e-08
Identities = 35/56 (62%), Positives = 37/56 (66%)
Frame = -1
Query: 450 ARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDRQQPAR 283
ARVI DR+TG SRGFGFV+F AMDGQ L GRNIRVSYANDR R
Sbjct: 65 ARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQDLNGRNIRVSYANDRPSAPR 120
>ref|XP_006373086.1| glycine-rich RNA-binding family protein [Populus trichocarpa]
gi|118482403|gb|ABK93124.1| unknown [Populus
trichocarpa] gi|550319792|gb|ERP50883.1| glycine-rich
RNA-binding family protein [Populus trichocarpa]
Length = 131
Score = 66.6 bits (161), Expect = 1e-08
Identities = 33/54 (61%), Positives = 37/54 (68%)
Frame = -1
Query: 450 ARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDRQQP 289
ARVI DR+TG SRGFGFV + AMDGQ LGGRNIRV YA D++QP
Sbjct: 65 ARVITDRDTGRSRGFGFVSYESTESASEALSAMDGQELGGRNIRVGYATDKRQP 118
>ref|XP_010909658.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X2 [Elaeis guineensis]
Length = 142
Score = 66.2 bits (160), Expect = 2e-08
Identities = 33/56 (58%), Positives = 38/56 (67%)
Frame = -1
Query: 450 ARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDRQQPAR 283
ARVI DR+TG SRGFGFV+F +MDGQ L GR IR+SYAN +QPAR
Sbjct: 69 ARVILDRDTGRSRGFGFVNFESDEDASAAMSSMDGQELNGRTIRISYANSDRQPAR 124
>ref|XP_010909657.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Elaeis guineensis]
Length = 161
Score = 66.2 bits (160), Expect = 2e-08
Identities = 33/56 (58%), Positives = 38/56 (67%)
Frame = -1
Query: 450 ARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDRQQPAR 283
ARVI DR+TG SRGFGFV+F +MDGQ L GR IR+SYAN +QPAR
Sbjct: 88 ARVILDRDTGRSRGFGFVNFESDEDASAAMSSMDGQELNGRTIRISYANSDRQPAR 143
>ref|XP_010905146.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Elaeis guineensis]
Length = 163
Score = 66.2 bits (160), Expect = 2e-08
Identities = 34/51 (66%), Positives = 35/51 (68%)
Frame = -1
Query: 450 ARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDR 298
ARVI DRETG SRGFGFV+F MDGQ L GRNIRVSYANDR
Sbjct: 69 ARVITDRETGRSRGFGFVNFDSGESASAAMSGMDGQELHGRNIRVSYANDR 119
>ref|XP_007163819.1| hypothetical protein PHAVU_001G267100g [Phaseolus vulgaris]
gi|561037283|gb|ESW35813.1| hypothetical protein
PHAVU_001G267100g [Phaseolus vulgaris]
Length = 135
Score = 66.2 bits (160), Expect = 2e-08
Identities = 35/56 (62%), Positives = 37/56 (66%)
Frame = -1
Query: 450 ARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDRQQPAR 283
ARVI DR+TG SRGFGFV+F AMDGQ L GRNIRVSYANDR R
Sbjct: 65 ARVITDRDTGRSRGFGFVNFSSDESATSALSAMDGQDLNGRNIRVSYANDRPSGPR 120
>ref|XP_009396794.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Musa acuminata subsp. malaccensis]
gi|695019559|ref|XP_009396796.1| PREDICTED: glycine-rich
RNA-binding protein 4, mitochondrial-like [Musa
acuminata subsp. malaccensis]
Length = 155
Score = 65.9 bits (159), Expect = 2e-08
Identities = 33/51 (64%), Positives = 35/51 (68%)
Frame = -1
Query: 450 ARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDR 298
ARVI DR+TG SRGFGFV+F MDGQ L GRNIRVSYANDR
Sbjct: 69 ARVITDRDTGRSRGFGFVNFDSDASASEALSGMDGQELNGRNIRVSYANDR 119
>ref|XP_012071090.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial
[Jatropha curcas] gi|643732140|gb|KDP39332.1|
hypothetical protein JCGZ_01089 [Jatropha curcas]
Length = 137
Score = 65.5 bits (158), Expect = 3e-08
Identities = 33/57 (57%), Positives = 38/57 (66%)
Frame = -1
Query: 453 TARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDRQQPAR 283
TARV+ DR+TG SRGFGFVDF AMDGQ L GR++RVSYA +R P R
Sbjct: 64 TARVVTDRDTGRSRGFGFVDFSSEESASSALSAMDGQELQGRSVRVSYAQERTGPPR 120
>ref|XP_008794650.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Phoenix dactylifera]
Length = 157
Score = 65.1 bits (157), Expect = 3e-08
Identities = 33/51 (64%), Positives = 36/51 (70%)
Frame = -1
Query: 450 ARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDR 298
ARVI DR+TG SRGFGFV+F +MDGQ L GRNIRVSYANDR
Sbjct: 69 ARVITDRDTGRSRGFGFVNFDSDESASAAMSSMDGQELHGRNIRVSYANDR 119
>ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding
protein, putative [Ricinus communis]
Length = 134
Score = 65.1 bits (157), Expect = 3e-08
Identities = 34/52 (65%), Positives = 36/52 (69%)
Frame = -1
Query: 453 TARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDR 298
TARVI DR+TG SRGFGFVDF AMDGQ L GRNIRVSYA +R
Sbjct: 64 TARVITDRDTGRSRGFGFVDFSSVDSASSALSAMDGQELHGRNIRVSYATER 115
>gb|AFK48773.1| unknown [Lotus japonicus]
Length = 146
Score = 65.1 bits (157), Expect = 3e-08
Identities = 33/51 (64%), Positives = 35/51 (68%)
Frame = -1
Query: 450 ARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDR 298
ARVI DR+TG SRGFGFV F +MDGQ L GRNIRVSYANDR
Sbjct: 65 ARVIVDRDTGRSRGFGFVSFDSEESASSALSSMDGQDLNGRNIRVSYANDR 115
>gb|AFK47118.1| unknown [Lotus japonicus]
Length = 146
Score = 65.1 bits (157), Expect = 3e-08
Identities = 33/51 (64%), Positives = 35/51 (68%)
Frame = -1
Query: 450 ARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDR 298
ARVI DR+TG SRGFGFV F +MDGQ L GRNIRVSYANDR
Sbjct: 65 ARVIVDRDTGRSRGFGFVSFDSEESASSALSSMDGQDLNGRNIRVSYANDR 115
>ref|XP_010909659.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X3 [Elaeis guineensis]
gi|743884345|ref|XP_010909660.1| PREDICTED: glycine-rich
RNA-binding protein 4, mitochondrial-like isoform X3
[Elaeis guineensis]
Length = 142
Score = 64.7 bits (156), Expect = 4e-08
Identities = 32/56 (57%), Positives = 38/56 (67%)
Frame = -1
Query: 450 ARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDRQQPAR 283
ARVI DR+TG SRGFGFV+F +MDG+ L GR IR+SYAN +QPAR
Sbjct: 69 ARVILDRDTGRSRGFGFVNFESDEDASAAMSSMDGRELNGRTIRISYANSDRQPAR 124
>ref|XP_003601657.1| RNA-binding (RRM/RBD/RNP motif) family protein [Medicago
truncatula] gi|355490705|gb|AES71908.1| RNA-binding
(RRM/RBD/RNP motif) family protein [Medicago truncatula]
Length = 146
Score = 64.7 bits (156), Expect = 4e-08
Identities = 35/52 (67%), Positives = 36/52 (69%)
Frame = -1
Query: 450 ARVIKDRETGNSRGFGFVDFXXXXXXXXXXXAMDGQPLGGRNIRVSYANDRQ 295
ARVI DRETG SRGFGFV+F MDGQ L GRNIRVSYANDRQ
Sbjct: 65 ARVITDRETGRSRGFGFVNFTSEESATSALS-MDGQDLNGRNIRVSYANDRQ 115