BLASTX nr result
ID: Cornus23_contig00009677
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00009677
(279 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010654615.1| PREDICTED: nuclear poly(A) polymerase 4-like... 76 1e-11
ref|XP_010654614.1| PREDICTED: nuclear poly(A) polymerase 4-like... 76 1e-11
emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera] 76 1e-11
ref|XP_008228415.1| PREDICTED: poly(A) polymerase alpha-like iso... 69 2e-09
ref|XP_008228414.1| PREDICTED: poly(A) polymerase type 3-like is... 69 2e-09
ref|XP_008228413.1| PREDICTED: poly(A) polymerase type 3-like is... 69 2e-09
ref|XP_007216443.1| hypothetical protein PRUPE_ppa022017mg, part... 65 2e-08
ref|XP_002515957.1| nucleic acid binding protein, putative [Rici... 62 2e-07
emb|CDO97968.1| unnamed protein product [Coffea canephora] 57 7e-06
ref|XP_012435284.1| PREDICTED: nuclear poly(A) polymerase 4 isof... 56 9e-06
ref|XP_012077399.1| PREDICTED: LOW QUALITY PROTEIN: nuclear poly... 56 9e-06
gb|KJB07468.1| hypothetical protein B456_001G025900 [Gossypium r... 56 9e-06
gb|KJB07467.1| hypothetical protein B456_001G025900 [Gossypium r... 56 9e-06
ref|XP_012435059.1| PREDICTED: nuclear poly(A) polymerase 4 isof... 56 9e-06
ref|XP_012434772.1| PREDICTED: nuclear poly(A) polymerase 4 isof... 56 9e-06
gb|KJB07462.1| hypothetical protein B456_001G025900 [Gossypium r... 56 9e-06
gb|KJB07461.1| hypothetical protein B456_001G025900 [Gossypium r... 56 9e-06
ref|XP_012434911.1| PREDICTED: nuclear poly(A) polymerase 4 isof... 56 9e-06
ref|XP_012435194.1| PREDICTED: nuclear poly(A) polymerase 4 isof... 56 9e-06
ref|XP_011072441.1| PREDICTED: nuclear poly(A) polymerase 4-like... 56 9e-06
>ref|XP_010654615.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X2 [Vitis
vinifera]
Length = 755
Score = 75.9 bits (185), Expect = 1e-11
Identities = 43/88 (48%), Positives = 53/88 (60%)
Frame = -3
Query: 271 GSIKSEPQTSKQCSPDGEVHRSGSGEGHLKRKRDLEGLDVKQDKPEKQQLISTQRQHSVS 92
G +S PQ E R+GS E H+KRK+D E +DV+QDK K+ IS QRQ SVS
Sbjct: 495 GYKRSRPQRPVNQQQGDEACRTGSSEKHMKRKKDPEEVDVEQDKAAKRLTISPQRQDSVS 554
Query: 91 PEIISQRFCSSSKQRMPLGFIRTKESAE 8
PEIIS RF SSS++ G + KE E
Sbjct: 555 PEIISHRFSSSSQECSASGSAKAKEIVE 582
>ref|XP_010654614.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X1 [Vitis
vinifera]
Length = 756
Score = 75.9 bits (185), Expect = 1e-11
Identities = 43/88 (48%), Positives = 53/88 (60%)
Frame = -3
Query: 271 GSIKSEPQTSKQCSPDGEVHRSGSGEGHLKRKRDLEGLDVKQDKPEKQQLISTQRQHSVS 92
G +S PQ E R+GS E H+KRK+D E +DV+QDK K+ IS QRQ SVS
Sbjct: 495 GYKRSRPQRPVNQQQGDEACRTGSSEKHMKRKKDPEEVDVEQDKAAKRLTISPQRQDSVS 554
Query: 91 PEIISQRFCSSSKQRMPLGFIRTKESAE 8
PEIIS RF SSS++ G + KE E
Sbjct: 555 PEIISHRFSSSSQECSASGSAKAKEIVE 582
>emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
Length = 778
Score = 75.9 bits (185), Expect = 1e-11
Identities = 43/88 (48%), Positives = 53/88 (60%)
Frame = -3
Query: 271 GSIKSEPQTSKQCSPDGEVHRSGSGEGHLKRKRDLEGLDVKQDKPEKQQLISTQRQHSVS 92
G +S PQ E R+GS E H+KRK+D E +DV+QDK K+ IS QRQ SVS
Sbjct: 486 GYKRSRPQRPVNQQQGDEACRTGSSEKHMKRKKDPEEVDVEQDKAAKRLTISPQRQDSVS 545
Query: 91 PEIISQRFCSSSKQRMPLGFIRTKESAE 8
PEIIS RF SSS++ G + KE E
Sbjct: 546 PEIISHRFSSSSQECSASGSAKAKEIVE 573
>ref|XP_008228415.1| PREDICTED: poly(A) polymerase alpha-like isoform X3 [Prunus mume]
Length = 574
Score = 68.6 bits (166), Expect = 2e-09
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = -3
Query: 265 IKSEPQTSKQCSPDGEVHRSGSGEGHLKRKRDLEGLDVKQDKP-EKQQLISTQRQHSVSP 89
I ++ Q K DGEV +GSGE HLKRK+DL+G+DV Q P EK+Q +S Q + SVSP
Sbjct: 364 IMAQQQADKLPYDDGEVSVTGSGERHLKRKKDLDGVDVNQVMPLEKRQSLSPQPRDSVSP 423
Query: 88 EIISQRFCSSSKQRMPLGF 32
IIS + S+S + GF
Sbjct: 424 VIISDKASSASPEHSDKGF 442
>ref|XP_008228414.1| PREDICTED: poly(A) polymerase type 3-like isoform X2 [Prunus mume]
Length = 714
Score = 68.6 bits (166), Expect = 2e-09
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = -3
Query: 265 IKSEPQTSKQCSPDGEVHRSGSGEGHLKRKRDLEGLDVKQDKP-EKQQLISTQRQHSVSP 89
I ++ Q K DGEV +GSGE HLKRK+DL+G+DV Q P EK+Q +S Q + SVSP
Sbjct: 505 IMAQQQADKLPYDDGEVSVTGSGERHLKRKKDLDGVDVNQVMPLEKRQSLSPQPRDSVSP 564
Query: 88 EIISQRFCSSSKQRMPLGF 32
IIS + S+S + GF
Sbjct: 565 VIISDKASSASPEHSDKGF 583
>ref|XP_008228413.1| PREDICTED: poly(A) polymerase type 3-like isoform X1 [Prunus mume]
Length = 715
Score = 68.6 bits (166), Expect = 2e-09
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = -3
Query: 265 IKSEPQTSKQCSPDGEVHRSGSGEGHLKRKRDLEGLDVKQDKP-EKQQLISTQRQHSVSP 89
I ++ Q K DGEV +GSGE HLKRK+DL+G+DV Q P EK+Q +S Q + SVSP
Sbjct: 505 IMAQQQADKLPYDDGEVSVTGSGERHLKRKKDLDGVDVNQVMPLEKRQSLSPQPRDSVSP 564
Query: 88 EIISQRFCSSSKQRMPLGF 32
IIS + S+S + GF
Sbjct: 565 VIISDKASSASPEHSDKGF 583
>ref|XP_007216443.1| hypothetical protein PRUPE_ppa022017mg, partial [Prunus persica]
gi|462412593|gb|EMJ17642.1| hypothetical protein
PRUPE_ppa022017mg, partial [Prunus persica]
Length = 581
Score = 65.1 bits (157), Expect = 2e-08
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = -3
Query: 265 IKSEPQTSKQCSPDGEVHRSGSGEGHLKRKRDLEGLDVKQDKP-EKQQLISTQRQHSVSP 89
I ++ Q K DGEV +GSGE HLKRK+DL+G+DV Q P EK+Q +S Q + SVSP
Sbjct: 505 IMAQQQADKLPYYDGEVSMTGSGERHLKRKKDLDGVDVNQVMPLEKRQSLSPQPRDSVSP 564
Query: 88 EIISQRFCSSS 56
IIS + S+S
Sbjct: 565 VIISDKASSAS 575
>ref|XP_002515957.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544862|gb|EEF46377.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 712
Score = 62.0 bits (149), Expect = 2e-07
Identities = 29/72 (40%), Positives = 45/72 (62%)
Frame = -3
Query: 265 IKSEPQTSKQCSPDGEVHRSGSGEGHLKRKRDLEGLDVKQDKPEKQQLISTQRQHSVSPE 86
+ ++ Q+ K C D + + +GS E KRK+D + +DVK D PEK+ IS QR+ SVSP+
Sbjct: 466 VTAQQQSDKTCCGDSDAYGNGSSERGHKRKKDSDEIDVKNDMPEKRNSISPQRRDSVSPD 525
Query: 85 IISQRFCSSSKQ 50
I + +F S +
Sbjct: 526 IFTHKFGGPSSE 537
>emb|CDO97968.1| unnamed protein product [Coffea canephora]
Length = 767
Score = 56.6 bits (135), Expect = 7e-06
Identities = 31/80 (38%), Positives = 46/80 (57%)
Frame = -3
Query: 241 KQCSPDGEVHRSGSGEGHLKRKRDLEGLDVKQDKPEKQQLISTQRQHSVSPEIISQRFCS 62
K +GE++RSGS E L RKR+LEG + Q PEK+Q I QR+ S+SP+++ +
Sbjct: 520 KSSEENGEIYRSGSTERCLNRKRELEGSENNQVSPEKRQSIRPQRRDSMSPDLLGVKNGI 579
Query: 61 SSKQRMPLGFIRTKESAEMN 2
+ + +R E AE N
Sbjct: 580 ALNECSSTVLVRGMEGAEAN 599
>ref|XP_012435284.1| PREDICTED: nuclear poly(A) polymerase 4 isoform X5 [Gossypium
raimondii]
Length = 765
Score = 56.2 bits (134), Expect = 9e-06
Identities = 32/65 (49%), Positives = 40/65 (61%)
Frame = -3
Query: 250 QTSKQCSPDGEVHRSGSGEGHLKRKRDLEGLDVKQDKPEKQQLISTQRQHSVSPEIISQR 71
QT K C D RSGS E +KRKRD E +D K +KPEK+ IS R SVSP+II+ +
Sbjct: 509 QTGKTCE-DVTTSRSGSAERQIKRKRDDETVDEKLNKPEKRASISPLRMESVSPDIITSK 567
Query: 70 FCSSS 56
+S
Sbjct: 568 SVGTS 572
>ref|XP_012077399.1| PREDICTED: LOW QUALITY PROTEIN: nuclear poly(A) polymerase 4
[Jatropha curcas]
Length = 833
Score = 56.2 bits (134), Expect = 9e-06
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Frame = -3
Query: 250 QTSKQCSPDGEV-HRSGSGEGHLKRKRDLEGLDVKQDKPEKQQLISTQRQHSVSPEIISQ 74
Q SK S DG R GS EGHLKRK D E +D++ DKPEK+ IS QR SVSPE +
Sbjct: 538 QVSK--SNDGAATSRIGSPEGHLKRKNDHEEVDLRPDKPEKRASISPQRLQSVSPESSTS 595
Query: 73 RFCSSS----KQRMPLG 35
R +S +R+ LG
Sbjct: 596 RCGGTSLANFSERIKLG 612
>gb|KJB07468.1| hypothetical protein B456_001G025900 [Gossypium raimondii]
Length = 635
Score = 56.2 bits (134), Expect = 9e-06
Identities = 32/65 (49%), Positives = 40/65 (61%)
Frame = -3
Query: 250 QTSKQCSPDGEVHRSGSGEGHLKRKRDLEGLDVKQDKPEKQQLISTQRQHSVSPEIISQR 71
QT K C D RSGS E +KRKRD E +D K +KPEK+ IS R SVSP+II+ +
Sbjct: 369 QTGKTCE-DVTTSRSGSAERQIKRKRDDETVDEKLNKPEKRASISPLRMESVSPDIITSK 427
Query: 70 FCSSS 56
+S
Sbjct: 428 SVGTS 432
>gb|KJB07467.1| hypothetical protein B456_001G025900 [Gossypium raimondii]
Length = 687
Score = 56.2 bits (134), Expect = 9e-06
Identities = 32/65 (49%), Positives = 40/65 (61%)
Frame = -3
Query: 250 QTSKQCSPDGEVHRSGSGEGHLKRKRDLEGLDVKQDKPEKQQLISTQRQHSVSPEIISQR 71
QT K C D RSGS E +KRKRD E +D K +KPEK+ IS R SVSP+II+ +
Sbjct: 421 QTGKTCE-DVTTSRSGSAERQIKRKRDDETVDEKLNKPEKRASISPLRMESVSPDIITSK 479
Query: 70 FCSSS 56
+S
Sbjct: 480 SVGTS 484
>ref|XP_012435059.1| PREDICTED: nuclear poly(A) polymerase 4 isoform X3 [Gossypium
raimondii] gi|823120692|ref|XP_012435128.1| PREDICTED:
nuclear poly(A) polymerase 4 isoform X3 [Gossypium
raimondii] gi|763739965|gb|KJB07464.1| hypothetical
protein B456_001G025900 [Gossypium raimondii]
Length = 766
Score = 56.2 bits (134), Expect = 9e-06
Identities = 32/65 (49%), Positives = 40/65 (61%)
Frame = -3
Query: 250 QTSKQCSPDGEVHRSGSGEGHLKRKRDLEGLDVKQDKPEKQQLISTQRQHSVSPEIISQR 71
QT K C D RSGS E +KRKRD E +D K +KPEK+ IS R SVSP+II+ +
Sbjct: 509 QTGKTCE-DVTTSRSGSAERQIKRKRDDETVDEKLNKPEKRASISPLRMESVSPDIITSK 567
Query: 70 FCSSS 56
+S
Sbjct: 568 SVGTS 572
>ref|XP_012434772.1| PREDICTED: nuclear poly(A) polymerase 4 isoform X1 [Gossypium
raimondii] gi|823120684|ref|XP_012434842.1| PREDICTED:
nuclear poly(A) polymerase 4 isoform X1 [Gossypium
raimondii] gi|763739964|gb|KJB07463.1| hypothetical
protein B456_001G025900 [Gossypium raimondii]
Length = 776
Score = 56.2 bits (134), Expect = 9e-06
Identities = 32/65 (49%), Positives = 40/65 (61%)
Frame = -3
Query: 250 QTSKQCSPDGEVHRSGSGEGHLKRKRDLEGLDVKQDKPEKQQLISTQRQHSVSPEIISQR 71
QT K C D RSGS E +KRKRD E +D K +KPEK+ IS R SVSP+II+ +
Sbjct: 509 QTGKTCE-DVTTSRSGSAERQIKRKRDDETVDEKLNKPEKRASISPLRMESVSPDIITSK 567
Query: 70 FCSSS 56
+S
Sbjct: 568 SVGTS 572
>gb|KJB07462.1| hypothetical protein B456_001G025900 [Gossypium raimondii]
Length = 760
Score = 56.2 bits (134), Expect = 9e-06
Identities = 32/65 (49%), Positives = 40/65 (61%)
Frame = -3
Query: 250 QTSKQCSPDGEVHRSGSGEGHLKRKRDLEGLDVKQDKPEKQQLISTQRQHSVSPEIISQR 71
QT K C D RSGS E +KRKRD E +D K +KPEK+ IS R SVSP+II+ +
Sbjct: 509 QTGKTCE-DVTTSRSGSAERQIKRKRDDETVDEKLNKPEKRASISPLRMESVSPDIITSK 567
Query: 70 FCSSS 56
+S
Sbjct: 568 SVGTS 572
>gb|KJB07461.1| hypothetical protein B456_001G025900 [Gossypium raimondii]
Length = 715
Score = 56.2 bits (134), Expect = 9e-06
Identities = 32/65 (49%), Positives = 40/65 (61%)
Frame = -3
Query: 250 QTSKQCSPDGEVHRSGSGEGHLKRKRDLEGLDVKQDKPEKQQLISTQRQHSVSPEIISQR 71
QT K C D RSGS E +KRKRD E +D K +KPEK+ IS R SVSP+II+ +
Sbjct: 509 QTGKTCE-DVTTSRSGSAERQIKRKRDDETVDEKLNKPEKRASISPLRMESVSPDIITSK 567
Query: 70 FCSSS 56
+S
Sbjct: 568 SVGTS 572
>ref|XP_012434911.1| PREDICTED: nuclear poly(A) polymerase 4 isoform X2 [Gossypium
raimondii] gi|823120688|ref|XP_012434982.1| PREDICTED:
nuclear poly(A) polymerase 4 isoform X2 [Gossypium
raimondii] gi|763739960|gb|KJB07459.1| hypothetical
protein B456_001G025900 [Gossypium raimondii]
gi|763739961|gb|KJB07460.1| hypothetical protein
B456_001G025900 [Gossypium raimondii]
gi|763739967|gb|KJB07466.1| hypothetical protein
B456_001G025900 [Gossypium raimondii]
Length = 775
Score = 56.2 bits (134), Expect = 9e-06
Identities = 32/65 (49%), Positives = 40/65 (61%)
Frame = -3
Query: 250 QTSKQCSPDGEVHRSGSGEGHLKRKRDLEGLDVKQDKPEKQQLISTQRQHSVSPEIISQR 71
QT K C D RSGS E +KRKRD E +D K +KPEK+ IS R SVSP+II+ +
Sbjct: 509 QTGKTCE-DVTTSRSGSAERQIKRKRDDETVDEKLNKPEKRASISPLRMESVSPDIITSK 567
Query: 70 FCSSS 56
+S
Sbjct: 568 SVGTS 572
>ref|XP_012435194.1| PREDICTED: nuclear poly(A) polymerase 4 isoform X4 [Gossypium
raimondii] gi|823120696|ref|XP_012435268.1| PREDICTED:
nuclear poly(A) polymerase 4 isoform X4 [Gossypium
raimondii] gi|763739959|gb|KJB07458.1| hypothetical
protein B456_001G025900 [Gossypium raimondii]
gi|763739966|gb|KJB07465.1| hypothetical protein
B456_001G025900 [Gossypium raimondii]
Length = 765
Score = 56.2 bits (134), Expect = 9e-06
Identities = 32/65 (49%), Positives = 40/65 (61%)
Frame = -3
Query: 250 QTSKQCSPDGEVHRSGSGEGHLKRKRDLEGLDVKQDKPEKQQLISTQRQHSVSPEIISQR 71
QT K C D RSGS E +KRKRD E +D K +KPEK+ IS R SVSP+II+ +
Sbjct: 509 QTGKTCE-DVTTSRSGSAERQIKRKRDDETVDEKLNKPEKRASISPLRMESVSPDIITSK 567
Query: 70 FCSSS 56
+S
Sbjct: 568 SVGTS 572
>ref|XP_011072441.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X2 [Sesamum
indicum]
Length = 751
Score = 56.2 bits (134), Expect = 9e-06
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = -3
Query: 265 IKSEPQTSKQCSPDGEVHRSGSGEGHLKRKRDLEGLDVKQD-KPEKQQLISTQRQHSVSP 89
+ S+ Q K S GE R GS E LKRK++L+ D+K+ +P+K +S QRQ SVSP
Sbjct: 512 LMSQHQVDKMSSEGGEACRPGSAERVLKRKKELDASDLKEGRRPQKSHSVSPQRQVSVSP 571
Query: 88 EIISQRFCSSSK 53
E+I R + K
Sbjct: 572 ELICSRSAGTLK 583