BLASTX nr result

ID: Cornus23_contig00009480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00009480
         (449 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517769.1| RNA polymerase sigma factor rpoD, putative [...   139   8e-31
ref|XP_002272444.2| PREDICTED: RNA polymerase sigma factor sigD,...   139   1e-30
emb|CBI24961.3| unnamed protein product [Vitis vinifera]              139   1e-30
ref|XP_010269782.1| PREDICTED: RNA polymerase sigma factor sigD,...   135   1e-29
ref|XP_012065614.1| PREDICTED: RNA polymerase sigma factor sigD,...   132   1e-28
ref|XP_012065613.1| PREDICTED: RNA polymerase sigma factor sigD,...   132   1e-28
ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Popu...   131   2e-28
ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Popu...   131   2e-28
ref|XP_006379082.1| hypothetical protein POPTR_0009s06210g [Popu...   131   2e-28
ref|XP_006379081.1| hypothetical protein POPTR_0009s06210g [Popu...   131   2e-28
ref|XP_006379080.1| hypothetical protein POPTR_0009s06210g [Popu...   131   2e-28
ref|XP_011025492.1| PREDICTED: RNA polymerase sigma factor sigD,...   127   4e-27
ref|XP_011025491.1| PREDICTED: RNA polymerase sigma factor sigD,...   127   4e-27
emb|CDP17818.1| unnamed protein product [Coffea canephora]            126   6e-27
ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prun...   125   2e-26
ref|XP_008231483.1| PREDICTED: RNA polymerase sigma factor sigD,...   123   5e-26
ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD,...   123   6e-26
ref|XP_010103268.1| RNA polymerase sigma factor rpoD [Morus nota...   122   1e-25
gb|AKC88710.1| sigma factor [Hypseocharis bilobata]                   117   4e-24
ref|XP_009354359.1| PREDICTED: RNA polymerase sigma factor sigD,...   115   1e-23

>ref|XP_002517769.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223543041|gb|EEF44576.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 389

 Score =  139 bits (350), Expect = 8e-31
 Identities = 66/117 (56%), Positives = 91/117 (77%)
 Frame = +2

Query: 98  LECVEVEMDSNGECKEVSFRTAKSGYLTPKEEAEYSLCLKEVARIEEAKRTITETSKHEP 277
           +EC++VE + + +C+   F+   +GYL+  EEAE+ LCLK+ AR+E A+R I ET +HEP
Sbjct: 91  IECLKVEEERDDQCEGALFQPVNNGYLSSIEEAEFCLCLKDHARVEAARRRIAETQEHEP 150

Query: 278 NSKQLAKAVGMSISSLDKIFCNGRESRERITCSYRRLVVSVANSYQGRGLSLQDLIQ 448
            SKQLA+A+ M   ++DKI C GR+SRERIT +YRRLV+S+AN Y+G+GLSLQDLIQ
Sbjct: 151 TSKQLAEALRMRKKNVDKILCKGRQSRERITGNYRRLVLSIANRYRGKGLSLQDLIQ 207


>ref|XP_002272444.2| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Vitis
           vinifera]
          Length = 442

 Score =  139 bits (349), Expect = 1e-30
 Identities = 73/112 (65%), Positives = 84/112 (75%)
 Frame = +2

Query: 113 VEMDSNGECKEVSFRTAKSGYLTPKEEAEYSLCLKEVARIEEAKRTITETSKHEPNSKQL 292
           VE     E  EVSF  A+S  LTP+EEAE+ LCLKE A +E A+R I ET +HEP S Q 
Sbjct: 125 VEKWDGEEVHEVSFGAARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQW 184

Query: 293 AKAVGMSISSLDKIFCNGRESRERITCSYRRLVVSVANSYQGRGLSLQDLIQ 448
           A+AVG+  SSLDK+ CNGRESRERI  SYRRLVVS+A  YQG+GLSLQDLIQ
Sbjct: 185 AEAVGIKRSSLDKMLCNGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQ 236


>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score =  139 bits (349), Expect = 1e-30
 Identities = 73/112 (65%), Positives = 84/112 (75%)
 Frame = +2

Query: 113 VEMDSNGECKEVSFRTAKSGYLTPKEEAEYSLCLKEVARIEEAKRTITETSKHEPNSKQL 292
           VE     E  EVSF  A+S  LTP+EEAE+ LCLKE A +E A+R I ET +HEP S Q 
Sbjct: 2   VEKWDGEEVHEVSFGAARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQW 61

Query: 293 AKAVGMSISSLDKIFCNGRESRERITCSYRRLVVSVANSYQGRGLSLQDLIQ 448
           A+AVG+  SSLDK+ CNGRESRERI  SYRRLVVS+A  YQG+GLSLQDLIQ
Sbjct: 62  AEAVGIKRSSLDKMLCNGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQ 113


>ref|XP_010269782.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Nelumbo
           nucifera]
          Length = 455

 Score =  135 bits (340), Expect = 1e-29
 Identities = 72/137 (52%), Positives = 92/137 (67%), Gaps = 1/137 (0%)
 Frame = +2

Query: 41  DWSNVSGVXXXXXXXXXNGLECVEVEMDSNGECKE-VSFRTAKSGYLTPKEEAEYSLCLK 217
           DW+ V G            LE +   +D +  C E  SFR ++S YLTPKEEAE+SL LK
Sbjct: 114 DWTRVGGAARSRRKKRSKALE-LSAGVDLSNNCMESCSFRPSRSMYLTPKEEAEFSLYLK 172

Query: 218 EVARIEEAKRTITETSKHEPNSKQLAKAVGMSISSLDKIFCNGRESRERITCSYRRLVVS 397
           E AR+E A+  + ET++HEP S Q A+A GM  ++LDK+ C  RESRERI  SYRRL+ S
Sbjct: 173 EEARLEAARTRLRETNEHEPTSSQWAEAAGMRGATLDKMLCQARESRERIVFSYRRLIFS 232

Query: 398 VANSYQGRGLSLQDLIQ 448
           +A+ YQG+GLSLQDLIQ
Sbjct: 233 IASGYQGKGLSLQDLIQ 249


>ref|XP_012065614.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
           X2 [Jatropha curcas]
          Length = 357

 Score =  132 bits (332), Expect = 1e-28
 Identities = 67/118 (56%), Positives = 87/118 (73%)
 Frame = +2

Query: 95  GLECVEVEMDSNGECKEVSFRTAKSGYLTPKEEAEYSLCLKEVARIEEAKRTITETSKHE 274
           G + V VE + NG+ +   F+++ +GYL+P EE E+ LCLK+ AR+E A+R I ET +HE
Sbjct: 106 GSDFVAVEEEKNGQNETALFQSSSNGYLSPIEETEFCLCLKDQARLEAARRRIAETQEHE 165

Query: 275 PNSKQLAKAVGMSISSLDKIFCNGRESRERITCSYRRLVVSVANSYQGRGLSLQDLIQ 448
           P  KQLAKA+ M   S+ KI C GRESR RIT  Y+RLVVS+A SY+G+GLSLQDLIQ
Sbjct: 166 PTLKQLAKALKMRRRSVGKIPCKGRESRRRITYYYKRLVVSIAKSYRGKGLSLQDLIQ 223


>ref|XP_012065613.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
           X1 [Jatropha curcas] gi|643737466|gb|KDP43578.1|
           hypothetical protein JCGZ_16865 [Jatropha curcas]
          Length = 429

 Score =  132 bits (332), Expect = 1e-28
 Identities = 67/118 (56%), Positives = 87/118 (73%)
 Frame = +2

Query: 95  GLECVEVEMDSNGECKEVSFRTAKSGYLTPKEEAEYSLCLKEVARIEEAKRTITETSKHE 274
           G + V VE + NG+ +   F+++ +GYL+P EE E+ LCLK+ AR+E A+R I ET +HE
Sbjct: 106 GSDFVAVEEEKNGQNETALFQSSSNGYLSPIEETEFCLCLKDQARLEAARRRIAETQEHE 165

Query: 275 PNSKQLAKAVGMSISSLDKIFCNGRESRERITCSYRRLVVSVANSYQGRGLSLQDLIQ 448
           P  KQLAKA+ M   S+ KI C GRESR RIT  Y+RLVVS+A SY+G+GLSLQDLIQ
Sbjct: 166 PTLKQLAKALKMRRRSVGKIPCKGRESRRRITYYYKRLVVSIAKSYRGKGLSLQDLIQ 223


>ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
           gi|550331146|gb|ERP56881.1| hypothetical protein
           POPTR_0009s06210g [Populus trichocarpa]
          Length = 423

 Score =  131 bits (329), Expect = 2e-28
 Identities = 67/111 (60%), Positives = 81/111 (72%)
 Frame = +2

Query: 116 EMDSNGECKEVSFRTAKSGYLTPKEEAEYSLCLKEVARIEEAKRTITETSKHEPNSKQLA 295
           E D   E K V   + K GYL+PKEEAE+S+CLK  ARIE A+R I E  + +P SKQLA
Sbjct: 106 ERDGGHEYKRVILESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLA 165

Query: 296 KAVGMSISSLDKIFCNGRESRERITCSYRRLVVSVANSYQGRGLSLQDLIQ 448
           KA+ M  +S+D + C GRESRE+I  SYRRLVVS+A SYQ +GLSLQDLIQ
Sbjct: 166 KALRMEKNSVDNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQ 216


>ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
           gi|550331145|gb|ERP56880.1| hypothetical protein
           POPTR_0009s06210g [Populus trichocarpa]
          Length = 419

 Score =  131 bits (329), Expect = 2e-28
 Identities = 67/111 (60%), Positives = 81/111 (72%)
 Frame = +2

Query: 116 EMDSNGECKEVSFRTAKSGYLTPKEEAEYSLCLKEVARIEEAKRTITETSKHEPNSKQLA 295
           E D   E K V   + K GYL+PKEEAE+S+CLK  ARIE A+R I E  + +P SKQLA
Sbjct: 106 ERDGGHEYKRVILESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLA 165

Query: 296 KAVGMSISSLDKIFCNGRESRERITCSYRRLVVSVANSYQGRGLSLQDLIQ 448
           KA+ M  +S+D + C GRESRE+I  SYRRLVVS+A SYQ +GLSLQDLIQ
Sbjct: 166 KALRMEKNSVDNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQ 216


>ref|XP_006379082.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
           gi|550331144|gb|ERP56879.1| hypothetical protein
           POPTR_0009s06210g [Populus trichocarpa]
          Length = 284

 Score =  131 bits (329), Expect = 2e-28
 Identities = 67/111 (60%), Positives = 81/111 (72%)
 Frame = +2

Query: 116 EMDSNGECKEVSFRTAKSGYLTPKEEAEYSLCLKEVARIEEAKRTITETSKHEPNSKQLA 295
           E D   E K V   + K GYL+PKEEAE+S+CLK  ARIE A+R I E  + +P SKQLA
Sbjct: 106 ERDGGHEYKRVILESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLA 165

Query: 296 KAVGMSISSLDKIFCNGRESRERITCSYRRLVVSVANSYQGRGLSLQDLIQ 448
           KA+ M  +S+D + C GRESRE+I  SYRRLVVS+A SYQ +GLSLQDLIQ
Sbjct: 166 KALRMEKNSVDNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQ 216


>ref|XP_006379081.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
           gi|550331143|gb|ERP56878.1| hypothetical protein
           POPTR_0009s06210g [Populus trichocarpa]
          Length = 276

 Score =  131 bits (329), Expect = 2e-28
 Identities = 67/111 (60%), Positives = 81/111 (72%)
 Frame = +2

Query: 116 EMDSNGECKEVSFRTAKSGYLTPKEEAEYSLCLKEVARIEEAKRTITETSKHEPNSKQLA 295
           E D   E K V   + K GYL+PKEEAE+S+CLK  ARIE A+R I E  + +P SKQLA
Sbjct: 106 ERDGGHEYKRVILESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLA 165

Query: 296 KAVGMSISSLDKIFCNGRESRERITCSYRRLVVSVANSYQGRGLSLQDLIQ 448
           KA+ M  +S+D + C GRESRE+I  SYRRLVVS+A SYQ +GLSLQDLIQ
Sbjct: 166 KALRMEKNSVDNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQ 216


>ref|XP_006379080.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
           gi|550331142|gb|ERP56877.1| hypothetical protein
           POPTR_0009s06210g [Populus trichocarpa]
          Length = 331

 Score =  131 bits (329), Expect = 2e-28
 Identities = 67/111 (60%), Positives = 81/111 (72%)
 Frame = +2

Query: 116 EMDSNGECKEVSFRTAKSGYLTPKEEAEYSLCLKEVARIEEAKRTITETSKHEPNSKQLA 295
           E D   E K V   + K GYL+PKEEAE+S+CLK  ARIE A+R I E  + +P SKQLA
Sbjct: 106 ERDGGHEYKRVILESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLA 165

Query: 296 KAVGMSISSLDKIFCNGRESRERITCSYRRLVVSVANSYQGRGLSLQDLIQ 448
           KA+ M  +S+D + C GRESRE+I  SYRRLVVS+A SYQ +GLSLQDLIQ
Sbjct: 166 KALRMEKNSVDNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQ 216


>ref|XP_011025492.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
           X2 [Populus euphratica]
          Length = 354

 Score =  127 bits (318), Expect = 4e-27
 Identities = 64/111 (57%), Positives = 81/111 (72%)
 Frame = +2

Query: 116 EMDSNGECKEVSFRTAKSGYLTPKEEAEYSLCLKEVARIEEAKRTITETSKHEPNSKQLA 295
           E D   E + V   + K GYL+PKEEAE+S+CLK  ARIE A+R I +  + +P SKQLA
Sbjct: 106 ERDVGHEYRRVILESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGDVQELDPTSKQLA 165

Query: 296 KAVGMSISSLDKIFCNGRESRERITCSYRRLVVSVANSYQGRGLSLQDLIQ 448
           KA+ M  +++D + C GRESRE+I  SYRRLVVS+A SYQ +GLSLQDLIQ
Sbjct: 166 KALRMEKNTVDNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQ 216


>ref|XP_011025491.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
           X1 [Populus euphratica]
          Length = 423

 Score =  127 bits (318), Expect = 4e-27
 Identities = 64/111 (57%), Positives = 81/111 (72%)
 Frame = +2

Query: 116 EMDSNGECKEVSFRTAKSGYLTPKEEAEYSLCLKEVARIEEAKRTITETSKHEPNSKQLA 295
           E D   E + V   + K GYL+PKEEAE+S+CLK  ARIE A+R I +  + +P SKQLA
Sbjct: 106 ERDVGHEYRRVILESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGDVQELDPTSKQLA 165

Query: 296 KAVGMSISSLDKIFCNGRESRERITCSYRRLVVSVANSYQGRGLSLQDLIQ 448
           KA+ M  +++D + C GRESRE+I  SYRRLVVS+A SYQ +GLSLQDLIQ
Sbjct: 166 KALRMEKNTVDNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQ 216


>emb|CDP17818.1| unnamed protein product [Coffea canephora]
          Length = 445

 Score =  126 bits (317), Expect = 6e-27
 Identities = 64/102 (62%), Positives = 82/102 (80%), Gaps = 1/102 (0%)
 Frame = +2

Query: 146 VSFRTAKSG-YLTPKEEAEYSLCLKEVARIEEAKRTITETSKHEPNSKQLAKAVGMSISS 322
           V+ +   SG YLTPK+EAEY+LCLKE AR+E  ++ I ET+++E    Q AKA GMS +S
Sbjct: 136 VAIKPTNSGQYLTPKQEAEYTLCLKEEARVEAVRKRIEETTENEVTFAQWAKAAGMSKNS 195

Query: 323 LDKIFCNGRESRERITCSYRRLVVSVANSYQGRGLSLQDLIQ 448
           LDK+ C+GRE++ERIT  YRRLV+SVA+SYQG+GLSLQDLIQ
Sbjct: 196 LDKVLCDGREAQERITRCYRRLVISVASSYQGKGLSLQDLIQ 237


>ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prunus persica]
           gi|462415663|gb|EMJ20400.1| hypothetical protein
           PRUPE_ppa017025mg [Prunus persica]
          Length = 440

 Score =  125 bits (313), Expect = 2e-26
 Identities = 66/118 (55%), Positives = 84/118 (71%)
 Frame = +2

Query: 95  GLECVEVEMDSNGECKEVSFRTAKSGYLTPKEEAEYSLCLKEVARIEEAKRTITETSKHE 274
           GLE ++ EM  + E   VSF   +  +L+P+EEAE  L LKE AR+E  +  + E  KHE
Sbjct: 117 GLEALDEEMKRDVEDGMVSFGFVRYEHLSPREEAECCLSLKEGARLESERFRVVEAQKHE 176

Query: 275 PNSKQLAKAVGMSISSLDKIFCNGRESRERITCSYRRLVVSVANSYQGRGLSLQDLIQ 448
           P SKQLAKA+GM + S+DK+ C  RES+E+I  SYR LVVSVA+SYQG+GLS QDLIQ
Sbjct: 177 PTSKQLAKAMGMKMRSIDKVLCKRRESQEKIIRSYRGLVVSVASSYQGKGLSFQDLIQ 234


>ref|XP_008231483.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Prunus
           mume]
          Length = 442

 Score =  123 bits (309), Expect = 5e-26
 Identities = 65/117 (55%), Positives = 84/117 (71%)
 Frame = +2

Query: 98  LECVEVEMDSNGECKEVSFRTAKSGYLTPKEEAEYSLCLKEVARIEEAKRTITETSKHEP 277
           LE ++ EM+ + E   VSF   +  +L+P+EEAE  L LKE AR+E  +  + E  KHEP
Sbjct: 118 LEALDEEMNRDVEDGMVSFGFVRYEHLSPREEAECCLSLKEGARLESERFRVVEAQKHEP 177

Query: 278 NSKQLAKAVGMSISSLDKIFCNGRESRERITCSYRRLVVSVANSYQGRGLSLQDLIQ 448
            SKQLAKA+GM + S+DK+ C  RES+E+I  SYR LVVSVA+SYQG+GLS QDLIQ
Sbjct: 178 TSKQLAKAMGMKMRSIDKVLCKRRESQEKIIRSYRGLVVSVASSYQGKGLSFQDLIQ 234


>ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic
           [Fragaria vesca subsp. vesca]
          Length = 452

 Score =  123 bits (308), Expect = 6e-26
 Identities = 66/120 (55%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
 Frame = +2

Query: 95  GLECVEVEMDSNGECKE--VSFRTAKSGYLTPKEEAEYSLCLKEVARIEEAKRTITETSK 268
           GLEC + E + N E ++   SF     GYL+P+EEA+  + LKE A++E  +   TE  +
Sbjct: 128 GLECFDDE-ERNRELEDGRFSFGVVSYGYLSPREEADCCMSLKEGAKLESERTRFTEAQE 186

Query: 269 HEPNSKQLAKAVGMSISSLDKIFCNGRESRERITCSYRRLVVSVANSYQGRGLSLQDLIQ 448
           HEP SKQLA A+ + +SS+DK+ CN RES+ERI  SYR LVVSVA+SYQG+GLSLQDLIQ
Sbjct: 187 HEPTSKQLANAMRIKMSSIDKVICNRRESQERIIKSYRGLVVSVASSYQGKGLSLQDLIQ 246


>ref|XP_010103268.1| RNA polymerase sigma factor rpoD [Morus notabilis]
           gi|587907279|gb|EXB95293.1| RNA polymerase sigma factor
           rpoD [Morus notabilis]
          Length = 422

 Score =  122 bits (306), Expect = 1e-25
 Identities = 63/117 (53%), Positives = 83/117 (70%)
 Frame = +2

Query: 98  LECVEVEMDSNGECKEVSFRTAKSGYLTPKEEAEYSLCLKEVARIEEAKRTITETSKHEP 277
           LE ++ +  S+GE    S    K GYL+P+EEAE  L LKE A++E  +  +T +  HEP
Sbjct: 97  LELLDTDEKSDGEDMRFSIGPMKLGYLSPREEAECCLILKEGAKLEATRLRMTNSEDHEP 156

Query: 278 NSKQLAKAVGMSISSLDKIFCNGRESRERITCSYRRLVVSVANSYQGRGLSLQDLIQ 448
            SK+LAKA+GM + S+DK+ C+ RES+ERI+ SYRRLVVSVA  YQG+GLS  DLIQ
Sbjct: 157 TSKELAKAMGMEMRSIDKMLCDKRESQERISRSYRRLVVSVAAGYQGKGLSFPDLIQ 213


>gb|AKC88710.1| sigma factor [Hypseocharis bilobata]
          Length = 437

 Score =  117 bits (292), Expect = 4e-24
 Identities = 63/114 (55%), Positives = 80/114 (70%), Gaps = 2/114 (1%)
 Frame = +2

Query: 113 VEMDSNGECKEVS--FRTAKSGYLTPKEEAEYSLCLKEVARIEEAKRTITETSKHEPNSK 286
           +E   NGE  E     R+ KSG+LTPK+EAE+ +CLKE AR+E  +R + E  K EP+ K
Sbjct: 115 LEGRENGEEDEEVPLIRSVKSGHLTPKQEAEFCMCLKEGARLEAQRRKLAEACKQEPSLK 174

Query: 287 QLAKAVGMSISSLDKIFCNGRESRERITCSYRRLVVSVANSYQGRGLSLQDLIQ 448
           QLA A+GM   ++D+I CN R S+E I  +YR LVVS+A  YQGRGLSLQDLIQ
Sbjct: 175 QLAMAMGMKKRNIDRILCNRRVSQETIIRTYRGLVVSIAIGYQGRGLSLQDLIQ 228


>ref|XP_009354359.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Pyrus x
           bretschneideri]
          Length = 436

 Score =  115 bits (289), Expect = 1e-23
 Identities = 68/145 (46%), Positives = 88/145 (60%)
 Frame = +2

Query: 14  RENGNGLERDWSNVSGVXXXXXXXXXNGLECVEVEMDSNGECKEVSFRTAKSGYLTPKEE 193
           RE+GNG     S    +          GLE +  E +      ++SF   + G+L+ KEE
Sbjct: 91  RESGNG-----SGGLVMRRKGRRQRRRGLEGLGEERERGVGDGKLSFGLVRCGHLSSKEE 145

Query: 194 AEYSLCLKEVARIEEAKRTITETSKHEPNSKQLAKAVGMSISSLDKIFCNGRESRERITC 373
           AE  L LKE AR+E  +  + E  + EP SKQLAKA+GM   S+DK+ C  RES+ERI  
Sbjct: 146 AECCLSLKEGARLESRRLRVVEDEEQEPTSKQLAKAMGMKTRSIDKVLCKKRESQERIIR 205

Query: 374 SYRRLVVSVANSYQGRGLSLQDLIQ 448
           SYR L+VSVA+SYQG+GLS QDLIQ
Sbjct: 206 SYRGLIVSVASSYQGKGLSFQDLIQ 230


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