BLASTX nr result

ID: Cornus23_contig00009359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00009359
         (524 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010663104.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    80   6e-13
emb|CBI14965.3| unnamed protein product [Vitis vinifera]               80   6e-13
emb|CAN78903.1| hypothetical protein VITISV_026451 [Vitis vinifera]    80   6e-13
ref|XP_010251083.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    60   8e-07

>ref|XP_010663104.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Vitis vinifera]
          Length = 718

 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 41/89 (46%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
 Frame = -2

Query: 487 LNRYDQRYADPHSYRERRSDLXXXXXXXXXXXXXXXXXXXXXXXXXXXGPIHFGGPPVA- 311
           +N YD R++DPHSYRERRSDL                           GP  +GGP V+ 
Sbjct: 1   MNHYDLRFSDPHSYRERRSDLMVAPPPVAPPPMMGGVVGGPSPTYGRGGPASYGGPSVSF 60

Query: 310 ---GRGSGSVTGSAPGAGSFNGYPPFQPG 233
              GRG G V+GS PG G FN YPPFQPG
Sbjct: 61  PNGGRGGGDVSGSVPGGGGFNAYPPFQPG 89


>emb|CBI14965.3| unnamed protein product [Vitis vinifera]
          Length = 611

 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 41/89 (46%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
 Frame = -2

Query: 487 LNRYDQRYADPHSYRERRSDLXXXXXXXXXXXXXXXXXXXXXXXXXXXGPIHFGGPPVA- 311
           +N YD R++DPHSYRERRSDL                           GP  +GGP V+ 
Sbjct: 1   MNHYDLRFSDPHSYRERRSDLMVAPPPVAPPPMMGGVVGGPSPTYGRGGPASYGGPSVSF 60

Query: 310 ---GRGSGSVTGSAPGAGSFNGYPPFQPG 233
              GRG G V+GS PG G FN YPPFQPG
Sbjct: 61  PNGGRGGGDVSGSVPGGGGFNAYPPFQPG 89


>emb|CAN78903.1| hypothetical protein VITISV_026451 [Vitis vinifera]
          Length = 692

 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 41/89 (46%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
 Frame = -2

Query: 487 LNRYDQRYADPHSYRERRSDLXXXXXXXXXXXXXXXXXXXXXXXXXXXGPIHFGGPPVA- 311
           +N YD R++DPHSYRERRSDL                           GP  +GGP V+ 
Sbjct: 1   MNHYDLRFSDPHSYRERRSDLMVAPPPVAPPPMMGGVVGGPSPTYGRGGPASYGGPSVSF 60

Query: 310 ---GRGSGSVTGSAPGAGSFNGYPPFQPG 233
              GRG G V+GS PG G FN YPPFQPG
Sbjct: 61  PNGGRGGGDVSGSVPGGGGFNAYPPFQPG 89


>ref|XP_010251083.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Nelumbo
           nucifera]
          Length = 719

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 37/89 (41%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
 Frame = -2

Query: 490 MLNRYDQRYADPHSYRERRSDLXXXXXXXXXXXXXXXXXXXXXXXXXXXGPIHFGGPPVA 311
           M++  D RY+DP+SYRERRSD                             P+ FGGPP A
Sbjct: 1   MMHSIDLRYSDPNSYRERRSDFMAPQQPAAPSLMSGAGGAAPHFGRGG--PVAFGGPPGA 58

Query: 310 ---GRGSGSVTGSAP-GAGSFNGYPPFQP 236
              GRG+G     AP GAG+FNG  PFQP
Sbjct: 59  FAGGRGAGGFGAPAPTGAGNFNGIAPFQP 87


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