BLASTX nr result
ID: Cornus23_contig00009311
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00009311
(443 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009605274.1| PREDICTED: DNA-directed RNA polymerase I sub... 55 4e-12
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub... 55 4e-12
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr... 55 4e-12
ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I sub... 55 4e-12
ref|XP_009345035.1| PREDICTED: DNA-directed RNA polymerase I sub... 55 4e-12
ref|XP_008392178.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 55 4e-12
ref|XP_011652120.1| PREDICTED: DNA-directed RNA polymerase I sub... 55 4e-12
ref|XP_009790932.1| PREDICTED: DNA-directed RNA polymerase I sub... 55 4e-12
ref|XP_008443105.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 55 4e-12
emb|CDP10074.1| unnamed protein product [Coffea canephora] 55 4e-12
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub... 55 4e-12
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub... 55 4e-12
ref|XP_010036456.1| PREDICTED: DNA-directed RNA polymerase I sub... 55 4e-12
ref|XP_010036455.1| PREDICTED: DNA-directed RNA polymerase I sub... 55 4e-12
emb|CBI29879.3| unnamed protein product [Vitis vinifera] 55 4e-12
gb|KCW48062.1| hypothetical protein EUGRSUZ_K01811 [Eucalyptus g... 55 4e-12
ref|XP_009345036.1| PREDICTED: DNA-directed RNA polymerase I sub... 55 4e-12
gb|KDO57202.1| hypothetical protein CISIN_1g0468251mg, partial [... 55 4e-12
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise... 55 6e-12
ref|XP_008240981.1| PREDICTED: DNA-directed RNA polymerase I sub... 54 7e-12
>ref|XP_009605274.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nicotiana
tomentosiformis]
Length = 1938
Score = 55.1 bits (131), Expect(2) = 4e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
E+T RMHYANCS YNADFD +EMN R EAYNIV+A+
Sbjct: 852 EKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN 895
Score = 42.4 bits (98), Expect(2) = 4e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 834 PTLHKPSIMAHVVRVLKGE 852
>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
sinensis]
Length = 1715
Score = 55.1 bits (131), Expect(2) = 4e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
E+T RMHYANCS YNADFD +EMN R EAYNIV+A+
Sbjct: 590 EKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEAYNIVNAN 633
Score = 42.4 bits (98), Expect(2) = 4e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 572 PTLHKPSIMAHVVRVLKGE 590
>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
gi|557523327|gb|ESR34694.1| hypothetical protein
CICLE_v10004132mg [Citrus clementina]
Length = 1715
Score = 55.1 bits (131), Expect(2) = 4e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
E+T RMHYANCS YNADFD +EMN R EAYNIV+A+
Sbjct: 590 EKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEAYNIVNAN 633
Score = 42.4 bits (98), Expect(2) = 4e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 572 PTLHKPSIMAHVVRVLKGE 590
>ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Vitis
vinifera]
Length = 1691
Score = 55.1 bits (131), Expect(2) = 4e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
E+T RMHYANCS YNADFD +EMN R EAYNIV+A+
Sbjct: 604 EKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN 647
Score = 42.4 bits (98), Expect(2) = 4e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 586 PTLHKPSIMAHVVRVLKGE 604
>ref|XP_009345035.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X1
[Pyrus x bretschneideri]
Length = 1684
Score = 55.1 bits (131), Expect(2) = 4e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
E+T RMHYANCS YNADFD +EMN R EAYNIV+A+
Sbjct: 557 EKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN 600
Score = 42.4 bits (98), Expect(2) = 4e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 539 PTLHKPSIMAHVVRVLKGE 557
>ref|XP_008392178.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I
subunit rpa1-like [Malus domestica]
Length = 1682
Score = 55.1 bits (131), Expect(2) = 4e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
E+T RMHYANCS YNADFD +EMN R EAYNIV+A+
Sbjct: 556 EKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN 599
Score = 42.4 bits (98), Expect(2) = 4e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 538 PTLHKPSIMAHVVRVLKGE 556
>ref|XP_011652120.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1 [Cucumis
sativus] gi|778684907|ref|XP_011652121.1| PREDICTED:
DNA-directed RNA polymerase I subunit RPA1 [Cucumis
sativus] gi|700204204|gb|KGN59337.1| hypothetical
protein Csa_3G811600 [Cucumis sativus]
Length = 1681
Score = 55.1 bits (131), Expect(2) = 4e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
E+T RMHYANCS YNADFD +EMN R EAYNIV+A+
Sbjct: 560 EKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN 603
Score = 42.4 bits (98), Expect(2) = 4e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 542 PTLHKPSIMAHVVRVLKGE 560
>ref|XP_009790932.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nicotiana
sylvestris]
Length = 1681
Score = 55.1 bits (131), Expect(2) = 4e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
E+T RMHYANCS YNADFD +EMN R EAYNIV+A+
Sbjct: 595 EKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN 638
Score = 42.4 bits (98), Expect(2) = 4e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 577 PTLHKPSIMAHVVRVLKGE 595
>ref|XP_008443105.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I
subunit rpa1 [Cucumis melo]
Length = 1681
Score = 55.1 bits (131), Expect(2) = 4e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
E+T RMHYANCS YNADFD +EMN R EAYNIV+A+
Sbjct: 560 EKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN 603
Score = 42.4 bits (98), Expect(2) = 4e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 542 PTLHKPSIMAHVVRVLKGE 560
>emb|CDP10074.1| unnamed protein product [Coffea canephora]
Length = 1680
Score = 55.1 bits (131), Expect(2) = 4e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
E+T RMHYANCS YNADFD +EMN R EAYNIV+A+
Sbjct: 597 EKTLRMHYANCSSYNADFDGDEMNVHFPQDEISRAEAYNIVNAN 640
Score = 42.4 bits (98), Expect(2) = 4e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 579 PTLHKPSIMAHVVRVLKGE 597
>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Solanum
lycopersicum]
Length = 1677
Score = 55.1 bits (131), Expect(2) = 4e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
E+T RMHYANCS YNADFD +EMN R EAYNIV+A+
Sbjct: 589 EKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN 632
Score = 42.4 bits (98), Expect(2) = 4e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 571 PTLHKPSIMAHVVRVLKGE 589
>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
tuberosum]
Length = 1675
Score = 55.1 bits (131), Expect(2) = 4e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
E+T RMHYANCS YNADFD +EMN R EAYNIV+A+
Sbjct: 589 EKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN 632
Score = 42.4 bits (98), Expect(2) = 4e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 571 PTLHKPSIMAHVVRVLKGE 589
>ref|XP_010036456.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X2
[Eucalyptus grandis]
Length = 1669
Score = 55.1 bits (131), Expect(2) = 4e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
E+T RMHYANCS YNADFD +EMN R EAYNIV+A+
Sbjct: 593 EKTLRMHYANCSTYNADFDGDEMNVHFPQDDISRAEAYNIVNAN 636
Score = 42.4 bits (98), Expect(2) = 4e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 575 PTLHKPSIMAHVVRVLKGE 593
>ref|XP_010036455.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X1
[Eucalyptus grandis]
Length = 1669
Score = 55.1 bits (131), Expect(2) = 4e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
E+T RMHYANCS YNADFD +EMN R EAYNIV+A+
Sbjct: 593 EKTLRMHYANCSTYNADFDGDEMNVHFPQDDISRAEAYNIVNAN 636
Score = 42.4 bits (98), Expect(2) = 4e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 575 PTLHKPSIMAHVVRVLKGE 593
>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
Length = 1669
Score = 55.1 bits (131), Expect(2) = 4e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
E+T RMHYANCS YNADFD +EMN R EAYNIV+A+
Sbjct: 582 EKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN 625
Score = 42.4 bits (98), Expect(2) = 4e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 564 PTLHKPSIMAHVVRVLKGE 582
>gb|KCW48062.1| hypothetical protein EUGRSUZ_K01811 [Eucalyptus grandis]
Length = 1606
Score = 55.1 bits (131), Expect(2) = 4e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
E+T RMHYANCS YNADFD +EMN R EAYNIV+A+
Sbjct: 530 EKTLRMHYANCSTYNADFDGDEMNVHFPQDDISRAEAYNIVNAN 573
Score = 42.4 bits (98), Expect(2) = 4e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 512 PTLHKPSIMAHVVRVLKGE 530
>ref|XP_009345036.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X2
[Pyrus x bretschneideri]
Length = 1373
Score = 55.1 bits (131), Expect(2) = 4e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
E+T RMHYANCS YNADFD +EMN R EAYNIV+A+
Sbjct: 246 EKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN 289
Score = 42.4 bits (98), Expect(2) = 4e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 228 PTLHKPSIMAHVVRVLKGE 246
>gb|KDO57202.1| hypothetical protein CISIN_1g0468251mg, partial [Citrus sinensis]
Length = 849
Score = 55.1 bits (131), Expect(2) = 4e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
E+T RMHYANCS YNADFD +EMN R EAYNIV+A+
Sbjct: 168 EKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEAYNIVNAN 211
Score = 42.4 bits (98), Expect(2) = 4e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 150 PTLHKPSIMAHVVRVLKGE 168
>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
Length = 1626
Score = 54.7 bits (130), Expect(2) = 6e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
ERT RMHYANCS YNADFD +E+N R EAYNIV+A+
Sbjct: 551 ERTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNAN 594
Score = 42.4 bits (98), Expect(2) = 6e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 533 PTLHKPSIMAHVVRVLKGE 551
>ref|XP_008240981.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Prunus mume]
Length = 1637
Score = 54.3 bits (129), Expect(2) = 7e-12
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 9/44 (20%)
Frame = -3
Query: 123 ERTFRMHYANCSFYNADFDDEEMN---------RVEAYNIVSAH 19
E+T RMHYANCS YNADFD +EMN R EAYNIV+A+
Sbjct: 517 EKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRSEAYNIVNAN 560
Score = 42.4 bits (98), Expect(2) = 7e-12
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 175 PTLHKPSIMAHVVRVLKGE 119
PTLHKPSIMAHVVRVLKGE
Sbjct: 499 PTLHKPSIMAHVVRVLKGE 517