BLASTX nr result
ID: Cornus23_contig00008885
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00008885
(1169 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP01670.1| unnamed protein product [Coffea canephora] 361 7e-97
ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3... 358 5e-96
emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera] 357 1e-95
ref|XP_006482393.1| PREDICTED: 60S ribosomal export protein NMD3... 355 4e-95
gb|KDO63152.1| hypothetical protein CISIN_1g010400mg [Citrus sin... 353 2e-94
ref|XP_006430673.1| hypothetical protein CICLE_v10011515mg [Citr... 353 2e-94
ref|XP_010268202.1| PREDICTED: 60S ribosomal export protein NMD3... 351 8e-94
ref|XP_009779349.1| PREDICTED: 60S ribosomal export protein NMD3... 350 1e-93
ref|XP_006350665.1| PREDICTED: 60S ribosomal export protein NMD3... 350 1e-93
ref|XP_010093122.1| hypothetical protein L484_009314 [Morus nota... 348 5e-93
ref|XP_011043901.1| PREDICTED: 60S ribosomal export protein NMD3... 347 8e-93
ref|XP_002306035.2| nonsense-mediated mRNA decay NMD3 family pro... 347 8e-93
ref|XP_006352400.1| PREDICTED: 60S ribosomal export protein NMD3... 347 1e-92
ref|XP_014515012.1| PREDICTED: 60S ribosomal export protein NMD3... 339 2e-90
ref|XP_011082654.1| PREDICTED: 60S ribosomal export protein NMD3... 339 3e-90
ref|XP_004241026.1| PREDICTED: 60S ribosomal export protein NMD3... 339 3e-90
ref|XP_009605641.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma... 338 7e-90
gb|KOM27233.1| hypothetical protein LR48_Vigan406s004300 [Vigna ... 337 9e-90
ref|XP_011081464.1| PREDICTED: 60S ribosomal export protein NMD3... 337 9e-90
ref|XP_011081462.1| PREDICTED: 60S ribosomal export protein NMD3... 337 9e-90
>emb|CDP01670.1| unnamed protein product [Coffea canephora]
Length = 578
Score = 361 bits (926), Expect = 7e-97
Identities = 176/223 (78%), Positives = 195/223 (87%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGNLGPLVICTK+SN+IAL+DPFTLRHCFLDADQYWRASFKSLLSSRQ
Sbjct: 334 LGNLGPLVICTKISNSIALMDPFTLRHCFLDADQYWRASFKSLLSSRQLVEYIVLDVEPV 393
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
VGGS+YVLADAQVARVSDFGKNDTIFS+RTHLGHLL+PGD ALGYDLY ANSND
Sbjct: 394 SSEVVVGGSRYVLADAQVARVSDFGKNDTIFSVRTHLGHLLSPGDNALGYDLYAANSNDI 453
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDIDDTAKARAEEEKKHLEY 630
ELDKYKGLV+PE +LIKKSYEEKRQ+KRGK RAWKL+SL+M++D+TAK R EEK + EY
Sbjct: 454 ELDKYKGLVLPEVVLIKKSYEEKRQKKRGKPRAWKLKSLDMEVDNTAKGRDHEEKVNSEY 513
Query: 629 EQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSVP 501
EQFLRDLEENPE+RFN+SLYRNKEYQPSEMAS TDGE++PSVP
Sbjct: 514 EQFLRDLEENPELRFNMSLYRNKEYQPSEMASVTDGEEVPSVP 556
>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3 [Vitis vinifera]
Length = 510
Score = 358 bits (919), Expect = 5e-96
Identities = 177/223 (79%), Positives = 195/223 (87%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWR+SFK+LLSSRQ
Sbjct: 267 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRSSFKALLSSRQLVEYIVLDVEIV 326
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
VGGSKY LADAQVARVSDFGKNDTIF+IRTHLGHLLNPGD+ALGYD+Y ANSND
Sbjct: 327 SSEVNVGGSKYALADAQVARVSDFGKNDTIFNIRTHLGHLLNPGDHALGYDVYAANSNDM 386
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDIDDTAKARAEEEKKHLEY 630
EL+KY+G V+PEAILIKKSYEEKRQRKRGK R+WKL+SLNM++DD +K RA++EK + EY
Sbjct: 387 ELEKYRGFVLPEAILIKKSYEEKRQRKRGKPRSWKLKSLNMEVDD-SKGRADQEKMNTEY 445
Query: 629 EQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSVP 501
E FLRDLEE+PE+RFNISLYRNKEYQPSEMAS TDGEDLPSVP
Sbjct: 446 EVFLRDLEEDPELRFNISLYRNKEYQPSEMASMTDGEDLPSVP 488
>emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]
Length = 594
Score = 357 bits (916), Expect = 1e-95
Identities = 176/223 (78%), Positives = 195/223 (87%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGNLGP+VICTKVSNNIALLDPFTLRHCFLDADQYWR+SFK+LLSSRQ
Sbjct: 267 LGNLGPVVICTKVSNNIALLDPFTLRHCFLDADQYWRSSFKALLSSRQLVEYIVLDVEIV 326
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
VGGSKY LADAQVARVSDFGKNDTIF+IRTHLGHLLNPGD+ALGYD+Y ANSND
Sbjct: 327 SSEVNVGGSKYALADAQVARVSDFGKNDTIFNIRTHLGHLLNPGDHALGYDVYAANSNDM 386
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDIDDTAKARAEEEKKHLEY 630
EL+KY+G V+PEAILIKKSYEEKRQRKRGK R+WKL+SLNM++DD +K RA++EK + EY
Sbjct: 387 ELEKYRGFVLPEAILIKKSYEEKRQRKRGKPRSWKLKSLNMEVDD-SKGRADQEKMNTEY 445
Query: 629 EQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSVP 501
E FLRDLEE+PE+RFNISLYRNKEYQPSEMAS TDGEDLPSVP
Sbjct: 446 EVFLRDLEEDPELRFNISLYRNKEYQPSEMASMTDGEDLPSVP 488
>ref|XP_006482393.1| PREDICTED: 60S ribosomal export protein NMD3-like, partial [Citrus
sinensis]
Length = 523
Score = 355 bits (911), Expect = 4e-95
Identities = 178/245 (72%), Positives = 198/245 (80%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGNLGPLVIC KV+N+IALLDPFTLRHCFLDADQYWR+SFKSLL+SRQ
Sbjct: 280 LGNLGPLVICMKVTNSIALLDPFTLRHCFLDADQYWRSSFKSLLTSRQLVEYIVLDVEVV 339
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
VGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLY AN+ND
Sbjct: 340 SSEVNVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYSANNNDM 399
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDIDDTAKARAEEEKKHLEY 630
ELDKYKGLV+PE ILIKKSYEEKR RKRGK R+WKL+SL+M++DD +K R ++EK + EY
Sbjct: 400 ELDKYKGLVLPETILIKKSYEEKRLRKRGKPRSWKLKSLDMEVDD-SKGRTDQEKMNKEY 458
Query: 629 EQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSVPXXXXXXXXXXXXXXXXD 450
E+FLRDLEENPE+RFN+SLYRNK+YQPSEMAS TDGED+PSVP
Sbjct: 459 EEFLRDLEENPELRFNVSLYRNKDYQPSEMASVTDGEDVPSVPLDELLADLDLSDDGEGG 518
Query: 449 GSMRE 435
SMRE
Sbjct: 519 DSMRE 523
>gb|KDO63152.1| hypothetical protein CISIN_1g010400mg [Citrus sinensis]
Length = 511
Score = 353 bits (905), Expect = 2e-94
Identities = 174/223 (78%), Positives = 193/223 (86%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGNLGPLVIC KV+N+IALLDPFTLRHCFLDADQYWR+SFKSLL+SRQ
Sbjct: 267 LGNLGPLVICMKVTNSIALLDPFTLRHCFLDADQYWRSSFKSLLTSRQLVEYIVLDVEVV 326
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
VGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLY AN+ND
Sbjct: 327 SSEVNVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYSANNNDM 386
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDIDDTAKARAEEEKKHLEY 630
ELDKYKGLV+PE ILIKKSYEEKR RKR K R+WKL+SL+M++DD +K R ++EK + EY
Sbjct: 387 ELDKYKGLVLPETILIKKSYEEKRLRKRSKPRSWKLKSLDMEVDD-SKGRTDQEKMNKEY 445
Query: 629 EQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSVP 501
E+FLRDLEENPE+RFNISLYRNK+YQPSEMAS TDGED+PSVP
Sbjct: 446 EEFLRDLEENPELRFNISLYRNKDYQPSEMASVTDGEDVPSVP 488
>ref|XP_006430673.1| hypothetical protein CICLE_v10011515mg [Citrus clementina]
gi|557532730|gb|ESR43913.1| hypothetical protein
CICLE_v10011515mg [Citrus clementina]
Length = 511
Score = 353 bits (905), Expect = 2e-94
Identities = 174/223 (78%), Positives = 193/223 (86%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGNLGPLVICTKV+N+IALLDP TLRHCFLDADQYWR+SFKSLL+SRQ
Sbjct: 267 LGNLGPLVICTKVTNSIALLDPLTLRHCFLDADQYWRSSFKSLLTSRQLVEYIVLDVEVV 326
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
VGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLY AN+ND
Sbjct: 327 SSEVNVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYSANNNDM 386
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDIDDTAKARAEEEKKHLEY 630
ELDKYKGLV+PE ILIKKSYEEKR RKR K R+WKL+SL+M++DD +K R ++EK + EY
Sbjct: 387 ELDKYKGLVLPETILIKKSYEEKRLRKRSKPRSWKLKSLDMEVDD-SKGRTDQEKMNKEY 445
Query: 629 EQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSVP 501
E+FLRDLEENPE+RFNISLYRNK+YQPSEMAS TDGED+PSVP
Sbjct: 446 EEFLRDLEENPELRFNISLYRNKDYQPSEMASVTDGEDVPSVP 488
>ref|XP_010268202.1| PREDICTED: 60S ribosomal export protein NMD3 [Nelumbo nucifera]
Length = 511
Score = 351 bits (900), Expect = 8e-94
Identities = 176/245 (71%), Positives = 195/245 (79%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGNLGPLV+CTKV+N++ LLDPFTLRHCF+DADQYWR+ F SLLSSRQ
Sbjct: 267 LGNLGPLVLCTKVTNSMVLLDPFTLRHCFMDADQYWRSPFTSLLSSRQLVEYIVLDVEIV 326
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
VGGSKYVLADAQVAR+SDFGKND IF IRTHLGHLLNPGDYALGYDLY ANSND
Sbjct: 327 SPEVNVGGSKYVLADAQVARMSDFGKNDKIFHIRTHLGHLLNPGDYALGYDLYGANSNDI 386
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDIDDTAKARAEEEKKHLEY 630
+LDKYKGLV+PEAILIKKSYEEKRQRKRGK R WKL+SLNM++D TAK R +E+K + EY
Sbjct: 387 QLDKYKGLVLPEAILIKKSYEEKRQRKRGKPRHWKLKSLNMEVDSTAKGRIDEDKMNKEY 446
Query: 629 EQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSVPXXXXXXXXXXXXXXXXD 450
E+FL+DLEENPE+RFNISLYRNKE QPSEMAS TDGED+PSVP D
Sbjct: 447 EEFLKDLEENPELRFNISLYRNKENQPSEMASMTDGEDVPSVPLEELLADLDLSDDENGD 506
Query: 449 GSMRE 435
SMRE
Sbjct: 507 DSMRE 511
>ref|XP_009779349.1| PREDICTED: 60S ribosomal export protein NMD3-like [Nicotiana
sylvestris]
Length = 511
Score = 350 bits (899), Expect = 1e-93
Identities = 168/223 (75%), Positives = 192/223 (86%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGN+GPLVICTKVSN+IALLDPFTLRHCFLDADQYWRASFK LLSSRQ
Sbjct: 267 LGNVGPLVICTKVSNSIALLDPFTLRHCFLDADQYWRASFKPLLSSRQLVEYVVLDVDVV 326
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
+GG+KYVLAD QVARVSDFGKNDT+FS+RTHLGHLL+PGDYALGYDLYRAN+ND
Sbjct: 327 SEEVNIGGAKYVLADIQVARVSDFGKNDTMFSVRTHLGHLLHPGDYALGYDLYRANNNDI 386
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDIDDTAKARAEEEKKHLEY 630
ELDKYKGLV+PE ILIKKSYEEKRQ+KRGK R+WKL+SLNM++D++ K R +E+K + EY
Sbjct: 387 ELDKYKGLVLPEVILIKKSYEEKRQKKRGKHRSWKLKSLNMEVDNSGKGRDQEQKLNSEY 446
Query: 629 EQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSVP 501
EQFLRDLEENP++RFNISLYRNKEYQ SE+ S DGED+PS+P
Sbjct: 447 EQFLRDLEENPDLRFNISLYRNKEYQRSEVTSIADGEDVPSIP 489
>ref|XP_006350665.1| PREDICTED: 60S ribosomal export protein NMD3-like [Solanum tuberosum]
Length = 511
Score = 350 bits (899), Expect = 1e-93
Identities = 174/245 (71%), Positives = 193/245 (78%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGNLGPLVICTKVSN+IALLDPFTLR+CFLDA+QYWRASFKSLLSSR
Sbjct: 267 LGNLGPLVICTKVSNHIALLDPFTLRNCFLDAEQYWRASFKSLLSSRLLVEYIVLDVEAV 326
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
+GGSKY LADAQVAR+SDFGKNDTIF++RTHLGHLLNPGDYALGYDLY NSND
Sbjct: 327 STEVNIGGSKYALADAQVARISDFGKNDTIFNVRTHLGHLLNPGDYALGYDLYATNSNDS 386
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDIDDTAKARAEEEKKHLEY 630
ELDKYKG V+P+ IL+KKSYEEK Q+KRGK R+WKL+SLNM+IDD K R EEK + EY
Sbjct: 387 ELDKYKGFVLPDVILVKKSYEEKWQKKRGKPRSWKLKSLNMEIDDNVKGRDHEEKMNSEY 446
Query: 629 EQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSVPXXXXXXXXXXXXXXXXD 450
EQFLRDLEENP++RFNISLYRNKEYQPSEMAS TDG+D PSVP +
Sbjct: 447 EQFLRDLEENPDLRFNISLYRNKEYQPSEMASVTDGDDAPSVPLEELLADLDLSEAEVDN 506
Query: 449 GSMRE 435
SMRE
Sbjct: 507 DSMRE 511
>ref|XP_010093122.1| hypothetical protein L484_009314 [Morus notabilis]
gi|587863832|gb|EXB53574.1| hypothetical protein
L484_009314 [Morus notabilis]
Length = 508
Score = 348 bits (893), Expect = 5e-93
Identities = 168/223 (75%), Positives = 196/223 (87%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGNLGPLVICTKV+N+IALLDPFTLRHCFLD+DQYWR+SFKSLL+SRQ
Sbjct: 266 LGNLGPLVICTKVTNSIALLDPFTLRHCFLDSDQYWRSSFKSLLTSRQLVEYIVLDVEIV 325
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
VGGS+Y LADAQVAR+SDFGKNDTIF+IRTHLGH+LNPGDYALGYDLY AN+ND
Sbjct: 326 SPDVNVGGSRYALADAQVARLSDFGKNDTIFNIRTHLGHILNPGDYALGYDLYAANNNDI 385
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDIDDTAKARAEEEKKHLEY 630
EL+KYKGLV+P+AILIKK+YEEKRQRKRGK+R+WKL+SLNM+ID+ K +AE+EK + EY
Sbjct: 386 ELEKYKGLVLPDAILIKKNYEEKRQRKRGKARSWKLKSLNMEIDE--KGKAEQEKVNSEY 443
Query: 629 EQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSVP 501
EQF++DLEENP+MRFNISLYR+KEYQPSE+AS TDGED PS+P
Sbjct: 444 EQFMKDLEENPDMRFNISLYRSKEYQPSEIASMTDGEDAPSIP 486
>ref|XP_011043901.1| PREDICTED: 60S ribosomal export protein NMD3-like [Populus
euphratica] gi|743901171|ref|XP_011043902.1| PREDICTED:
60S ribosomal export protein NMD3-like [Populus
euphratica]
Length = 511
Score = 347 bits (891), Expect = 8e-93
Identities = 167/223 (74%), Positives = 192/223 (86%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGNLGPLVIC+KV+N+IALLDPFTLRHCFLDADQYWR FKSLL+SRQ
Sbjct: 268 LGNLGPLVICSKVTNSIALLDPFTLRHCFLDADQYWRTPFKSLLTSRQLVEYIVFDVDFI 327
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
+GGS+Y LADA VAR+SDFGKNDT+F+I+THLGH+L PGDYALGYDL+ ANSND
Sbjct: 328 SPEVNIGGSRYALADATVARMSDFGKNDTMFNIKTHLGHILKPGDYALGYDLHGANSNDM 387
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDIDDTAKARAEEEKKHLEY 630
ELDKYK LVIPEAIL+KKSYEEKRQRKRGK R+WKL+SLNM++DDT +AR ++EK + EY
Sbjct: 388 ELDKYKNLVIPEAILVKKSYEEKRQRKRGKPRSWKLKSLNMEVDDT-RARGDQEKMNSEY 446
Query: 629 EQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSVP 501
EQFLRDLEENPE+RFN+SLYRNKEYQPSEMAS TDGED+PS+P
Sbjct: 447 EQFLRDLEENPELRFNVSLYRNKEYQPSEMASMTDGEDIPSIP 489
>ref|XP_002306035.2| nonsense-mediated mRNA decay NMD3 family protein [Populus
trichocarpa] gi|550340877|gb|EEE86546.2|
nonsense-mediated mRNA decay NMD3 family protein [Populus
trichocarpa]
Length = 511
Score = 347 bits (891), Expect = 8e-93
Identities = 167/223 (74%), Positives = 192/223 (86%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGNLGPLVIC+KV+N+IALLDPFTLRHCFLDADQYWR FKSLL+SRQ
Sbjct: 268 LGNLGPLVICSKVTNSIALLDPFTLRHCFLDADQYWRTPFKSLLTSRQLVEYIVFDVDFV 327
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
+GGS+Y LADA VAR+SDFGKNDT+F+I+THLGH+L PGDYALGYDL+ ANSND
Sbjct: 328 SPEVNIGGSRYALADATVARMSDFGKNDTMFNIKTHLGHILKPGDYALGYDLHGANSNDM 387
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDIDDTAKARAEEEKKHLEY 630
ELDKYK LVIPEAIL+KKSYEEKRQRKRGK R+WKL+SLNM++DDT +AR ++EK + EY
Sbjct: 388 ELDKYKNLVIPEAILVKKSYEEKRQRKRGKPRSWKLKSLNMEVDDT-RARGDQEKMNSEY 446
Query: 629 EQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSVP 501
EQFLRDLEENPE+RFN+SLYRNKEYQPSEMAS TDGED+PS+P
Sbjct: 447 EQFLRDLEENPELRFNVSLYRNKEYQPSEMASMTDGEDIPSIP 489
>ref|XP_006352400.1| PREDICTED: 60S ribosomal export protein NMD3-like [Solanum tuberosum]
Length = 511
Score = 347 bits (889), Expect = 1e-92
Identities = 168/223 (75%), Positives = 189/223 (84%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGN+GPLVICTKVSN+I+LLDPFTLRHCFLDADQYWRASFK LLSSRQ
Sbjct: 267 LGNIGPLVICTKVSNSISLLDPFTLRHCFLDADQYWRASFKPLLSSRQLVEYVVLDVDVV 326
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
+GGSKYVLAD QVARVSDFGKNDTIFS+RTHLGHLL+ GDYALGYDLYRANSNDF
Sbjct: 327 SEEVNIGGSKYVLADIQVARVSDFGKNDTIFSVRTHLGHLLDAGDYALGYDLYRANSNDF 386
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDIDDTAKARAEEEKKHLEY 630
EL+KYKGLV+PE ILIKKSYEEK Q+KRGK R+WKL+SLNM+ID++ K R +E+K + EY
Sbjct: 387 ELEKYKGLVLPEVILIKKSYEEKHQKKRGKPRSWKLKSLNMEIDNSGKGRDQEQKMNSEY 446
Query: 629 EQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSVP 501
E FLRDLEENP+MRFNISLYR+KEYQ SE S DGED+PS+P
Sbjct: 447 EHFLRDLEENPDMRFNISLYRDKEYQRSETTSVADGEDVPSIP 489
>ref|XP_014515012.1| PREDICTED: 60S ribosomal export protein NMD3 [Vigna radiata var.
radiata] gi|951030907|ref|XP_014515013.1| PREDICTED: 60S
ribosomal export protein NMD3 [Vigna radiata var.
radiata]
Length = 516
Score = 339 bits (870), Expect = 2e-90
Identities = 168/223 (75%), Positives = 190/223 (85%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGN+GP+VICTKV+N+IALLDPFTLRHCFLDADQYWR SFKSLL+SRQ
Sbjct: 276 LGNIGPIVICTKVTNSIALLDPFTLRHCFLDADQYWRTSFKSLLTSRQLVEYIVLDVEVV 335
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
+GG+KY+LADAQVARVSDFGKNDTIF+IRTHLGHLLNPGDYALGYDLY ANSND
Sbjct: 336 SSEVTIGGTKYLLADAQVARVSDFGKNDTIFNIRTHLGHLLNPGDYALGYDLYGANSNDM 395
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDIDDTAKARAEEEKKHLEY 630
ELDK+KG IPEAILIKKSYEEKRQ+KRGK R+WKL+SL M++DD R +++K EY
Sbjct: 396 ELDKFKG-HIPEAILIKKSYEEKRQKKRGKPRSWKLKSLEMEVDD---RRLDQDKMGSEY 451
Query: 629 EQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSVP 501
EQFL+DLEENP+MRFNISLYRNKEYQPSEMAS TDG++LPSVP
Sbjct: 452 EQFLKDLEENPDMRFNISLYRNKEYQPSEMASVTDGDELPSVP 494
>ref|XP_011082654.1| PREDICTED: 60S ribosomal export protein NMD3-like [Sesamum indicum]
Length = 515
Score = 339 bits (869), Expect = 3e-90
Identities = 164/223 (73%), Positives = 188/223 (84%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGN GPLVIC KV+NNIALLDPFTLR FLDA+QYWR+SFK+LLSSRQ
Sbjct: 267 LGNFGPLVICDKVTNNIALLDPFTLRQSFLDAEQYWRSSFKALLSSRQLVEYIVLDVEPV 326
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
VGG KYVLADAQVARVSDFGKNDTIF++RTHLGH+LNPGD+ALGYDLY AN+ND
Sbjct: 327 SSEVNVGGLKYVLADAQVARVSDFGKNDTIFNVRTHLGHILNPGDFALGYDLYGANNNDI 386
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDIDDTAKARAEEEKKHLEY 630
ELDKYKGLV+P+ ILIKKSYEEKRQ++RGK R+WKL+SLNM+ID+T + + EEK + EY
Sbjct: 387 ELDKYKGLVLPDVILIKKSYEEKRQKRRGKPRSWKLKSLNMEIDNTVRGKDNEEKMNSEY 446
Query: 629 EQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSVP 501
EQFLRDLEENP++RFN+SLYRNKE QPSEM S TDGED+PSVP
Sbjct: 447 EQFLRDLEENPDLRFNLSLYRNKENQPSEMVSVTDGEDVPSVP 489
>ref|XP_004241026.1| PREDICTED: 60S ribosomal export protein NMD3 [Solanum lycopersicum]
Length = 511
Score = 339 bits (869), Expect = 3e-90
Identities = 170/245 (69%), Positives = 190/245 (77%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGNLGPLVICTKVSN+IALLDP TLR+CFLDA+QYWRASFKSLL+SRQ
Sbjct: 267 LGNLGPLVICTKVSNHIALLDPLTLRNCFLDAEQYWRASFKSLLTSRQLVEYIVLDIEAV 326
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
+GGSKY LADAQVAR+SDFGKNDTIF+IRTHLGH+LNPGD ALGYDLY ANSND
Sbjct: 327 SSEVNIGGSKYALADAQVARISDFGKNDTIFNIRTHLGHILNPGDNALGYDLYAANSNDS 386
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDIDDTAKARAEEEKKHLEY 630
ELDKYKG V+P+ IL+KKSYEEK Q+KRGK R+WKL+SLNM+IDD K R +EEKK EY
Sbjct: 387 ELDKYKGFVLPDVILVKKSYEEKWQKKRGKPRSWKLKSLNMEIDDNVKGRDDEEKKENEY 446
Query: 629 EQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSVPXXXXXXXXXXXXXXXXD 450
E FLRD+EEN +MRF ISLYRNKEYQPSEMAS TD +D PSVP +
Sbjct: 447 EIFLRDIEENADMRFRISLYRNKEYQPSEMASVTDDDDAPSVPLEELLADLDLSEAEDDN 506
Query: 449 GSMRE 435
SMRE
Sbjct: 507 DSMRE 511
>ref|XP_009605641.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal export protein
NMD3-like, partial [Nicotiana tomentosiformis]
Length = 494
Score = 338 bits (866), Expect = 7e-90
Identities = 169/223 (75%), Positives = 185/223 (82%), Gaps = 1/223 (0%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGNLGPLVICTKVSNNIALLDPFTLR+CFLDA+QYWRASF+SLLSSRQ
Sbjct: 249 LGNLGPLVICTKVSNNIALLDPFTLRNCFLDAEQYWRASFRSLLSSRQLVEYIVLDVESV 308
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
VGGSKY LADAQVARVSDFGKNDTIF++RTHLGHLLNPGDYALGYDLY ANSND
Sbjct: 309 SSEVNVGGSKYALADAQVARVSDFGKNDTIFNVRTHLGHLLNPGDYALGYDLYAANSNDN 368
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDI-DDTAKARAEEEKKHLE 633
ELDKYK V+P+ IL+KKSYEEK Q+K GK R+WKL+SLNM+I DD K R EEK E
Sbjct: 369 ELDKYKVFVLPDVILVKKSYEEKWQKKCGKPRSWKLKSLNMEISDDNVKGRDHEEKMSSE 428
Query: 632 YEQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSV 504
YEQFLRDLEENP++RFNISLYRN+EYQPSEM S TDG+D PSV
Sbjct: 429 YEQFLRDLEENPDLRFNISLYRNREYQPSEMGSVTDGDDAPSV 471
>gb|KOM27233.1| hypothetical protein LR48_Vigan406s004300 [Vigna angularis]
Length = 516
Score = 337 bits (865), Expect = 9e-90
Identities = 168/223 (75%), Positives = 189/223 (84%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGN+GP+VICTKV+N+IALLDPFTLRHCFLDADQYWR SFKSLL+SRQ
Sbjct: 276 LGNIGPIVICTKVTNSIALLDPFTLRHCFLDADQYWRTSFKSLLTSRQLVEYIVLDVEVV 335
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
+GG+KY LADAQVARVSDFGKNDTIF+IRTHLGHLLNPGDYALGYDLY ANSND
Sbjct: 336 SSEVTIGGTKYRLADAQVARVSDFGKNDTIFNIRTHLGHLLNPGDYALGYDLYGANSNDM 395
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDIDDTAKARAEEEKKHLEY 630
ELDK+KG IPEAILIKKSYEEKRQ+KRGK R+WKL+SL M++DD R +++K EY
Sbjct: 396 ELDKFKG-HIPEAILIKKSYEEKRQKKRGKPRSWKLKSLEMEVDD---RRLDQDKMVSEY 451
Query: 629 EQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSVP 501
EQFL+DLEENP+MRFNISLYRNKEYQPSEMAS TDG++LPSVP
Sbjct: 452 EQFLKDLEENPDMRFNISLYRNKEYQPSEMASVTDGDELPSVP 494
>ref|XP_011081464.1| PREDICTED: 60S ribosomal export protein NMD3-like isoform X2 [Sesamum
indicum]
Length = 579
Score = 337 bits (865), Expect = 9e-90
Identities = 163/223 (73%), Positives = 188/223 (84%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGN GPLVIC KV+N IALLDPFTLR FLDA+QYWR+SFK+LLSS Q
Sbjct: 322 LGNFGPLVICNKVTNIIALLDPFTLRQSFLDAEQYWRSSFKALLSSTQLVEYIVLDVEPV 381
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
VGG KYVLAD QVAR+SDFGKNDTIF++RTHLGH+LNPGDYALGYDLY AN+ND
Sbjct: 382 SSEVNVGGLKYVLADVQVARLSDFGKNDTIFNVRTHLGHILNPGDYALGYDLYGANNNDI 441
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDIDDTAKARAEEEKKHLEY 630
ELDKYKGLV+P+ ILIKKSYEEKRQ++RGK R+WKL+SLNM+ID+T++ + EEK + EY
Sbjct: 442 ELDKYKGLVLPDVILIKKSYEEKRQKRRGKPRSWKLKSLNMEIDNTSRGKDNEEKMNSEY 501
Query: 629 EQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSVP 501
EQFLRDLEENP++RFN+SLYRNKEYQPSEMAS TDGED+PSVP
Sbjct: 502 EQFLRDLEENPDLRFNLSLYRNKEYQPSEMASMTDGEDVPSVP 544
>ref|XP_011081462.1| PREDICTED: 60S ribosomal export protein NMD3-like isoform X1 [Sesamum
indicum]
Length = 586
Score = 337 bits (865), Expect = 9e-90
Identities = 163/223 (73%), Positives = 188/223 (84%)
Frame = -1
Query: 1169 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRASFKSLLSSRQXXXXXXXXXXXX 990
LGN GPLVIC KV+N IALLDPFTLR FLDA+QYWR+SFK+LLSS Q
Sbjct: 322 LGNFGPLVICNKVTNIIALLDPFTLRQSFLDAEQYWRSSFKALLSSTQLVEYIVLDVEPV 381
Query: 989 XXXXXVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYRANSNDF 810
VGG KYVLAD QVAR+SDFGKNDTIF++RTHLGH+LNPGDYALGYDLY AN+ND
Sbjct: 382 SSEVNVGGLKYVLADVQVARLSDFGKNDTIFNVRTHLGHILNPGDYALGYDLYGANNNDI 441
Query: 809 ELDKYKGLVIPEAILIKKSYEEKRQRKRGKSRAWKLRSLNMDIDDTAKARAEEEKKHLEY 630
ELDKYKGLV+P+ ILIKKSYEEKRQ++RGK R+WKL+SLNM+ID+T++ + EEK + EY
Sbjct: 442 ELDKYKGLVLPDVILIKKSYEEKRQKRRGKPRSWKLKSLNMEIDNTSRGKDNEEKMNSEY 501
Query: 629 EQFLRDLEENPEMRFNISLYRNKEYQPSEMASTTDGEDLPSVP 501
EQFLRDLEENP++RFN+SLYRNKEYQPSEMAS TDGED+PSVP
Sbjct: 502 EQFLRDLEENPDLRFNLSLYRNKEYQPSEMASMTDGEDVPSVP 544