BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00008613
         (1491 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007042502.1| DNA-directed RNA polymerase family protein [...   591   e-166
ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, ...   591   e-166
ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta...   585   e-164
ref|XP_012459245.1| PREDICTED: DNA-directed RNA polymerases II, ...   583   e-163
gb|KHG20623.1| DNA-directed RNA polymerase II subunit RPB3-A -li...   583   e-163
ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citr...   574   e-161
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerases II, ...   572   e-160
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]   572   e-160
ref|XP_010065975.1| PREDICTED: DNA-directed RNA polymerases II, ...   560   e-156
ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polype...   558   e-156
ref|XP_012065701.1| PREDICTED: DNA-directed RNA polymerases II, ...   558   e-156
ref|XP_008441761.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   556   e-155
ref|XP_011000984.1| PREDICTED: DNA-directed RNA polymerases II, ...   555   e-155
ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerases II, ...   555   e-155
ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerases II, ...   555   e-155
ref|XP_011092547.1| PREDICTED: DNA-directed RNA polymerases II, ...   554   e-155
ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, ...   553   e-154
ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerases II, ...   553   e-154
ref|XP_008236569.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   552   e-154
ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerases II, ...   552   e-154

>ref|XP_007042502.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
            gi|508706437|gb|EOX98333.1| DNA-directed RNA polymerase
            family protein [Theobroma cacao]
          Length = 318

 Score =  591 bits (1524), Expect = e-166
 Identities = 296/320 (92%), Positives = 313/320 (97%)
 Frame = -1

Query: 1377 MEGNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 1198
            MEG SYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1197 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 1018
            VLNDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCEFCSVEFHLRAKC++DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLDV 120

Query: 1017 TSKDLYSSDHTVVPVDFSDSSASGYDNPEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 838
            TSKDLYSSDHTVVPVDF+DS+  GYD+ EQRGIIIVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 121  TSKDLYSSDHTVVPVDFTDSA--GYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 837  WSPAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPEAYT 658
            WSPAATVTFMYEPEIHINED+M+ L+LEE+ SFVESSPT+VFDIDPNTQQVVVVDPEAYT
Sbjct: 179  WSPAATVTFMYEPEIHINEDMMETLTLEEKQSFVESSPTRVFDIDPNTQQVVVVDPEAYT 238

Query: 657  YDDEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 478
            YDDEV+K+A++MGKPGLVEIYAKEDSF+FTVESTGA+KASQLVLNAIEVLKQKLDAVRLS
Sbjct: 239  YDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLS 298

Query: 477  EDTVEADEQFGELGAHMRGG 418
            EDTVEAD+QFGELGAHMRGG
Sbjct: 299  EDTVEADDQFGELGAHMRGG 318


>ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Gossypium raimondii] gi|728821384|gb|KHG04309.1|
            DNA-directed RNA polymerase II subunit RPB3-A -like
            protein [Gossypium arboreum] gi|763780305|gb|KJB47376.1|
            hypothetical protein B456_008G023500 [Gossypium
            raimondii]
          Length = 318

 Score =  591 bits (1523), Expect = e-166
 Identities = 296/320 (92%), Positives = 313/320 (97%)
 Frame = -1

Query: 1377 MEGNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 1198
            MEG SYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMI+EVPTIAIDLVEIEVNSS
Sbjct: 1    MEGISYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMISEVPTIAIDLVEIEVNSS 60

Query: 1197 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 1018
            VLNDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 120

Query: 1017 TSKDLYSSDHTVVPVDFSDSSASGYDNPEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 838
            TSKDLYSSDHTVVPVDF+D++  GYD+ E RGIIIVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 121  TSKDLYSSDHTVVPVDFTDNA--GYDSTEPRGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 837  WSPAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPEAYT 658
            WSPAATVTFMYEPEIHINEDLM++L+LEE+ SFVESSPTKVFDIDPNTQQVVVVDPEAYT
Sbjct: 179  WSPAATVTFMYEPEIHINEDLMESLTLEEKLSFVESSPTKVFDIDPNTQQVVVVDPEAYT 238

Query: 657  YDDEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 478
            YDDEV+K+A++MGKPGLVEIYAKEDSF+FTVESTGA+KASQLVLNAIE+LKQKLDAVRLS
Sbjct: 239  YDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLS 298

Query: 477  EDTVEADEQFGELGAHMRGG 418
            EDTVEAD+QFGELGAHMRGG
Sbjct: 299  EDTVEADDQFGELGAHMRGG 318


>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
            gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
            II subunit, putative [Ricinus communis]
          Length = 318

 Score =  585 bits (1507), Expect = e-164
 Identities = 292/320 (91%), Positives = 311/320 (97%)
 Frame = -1

Query: 1377 MEGNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 1198
            MEG SYQRFP++KIRELKDDY KFELRDTDASMANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1    MEGASYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 1197 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 1018
            VLNDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQC++CSVEFHLRAKCI+DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLDV 120

Query: 1017 TSKDLYSSDHTVVPVDFSDSSASGYDNPEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 838
            TSKDLYSSDHTVVPVDFSDSS  GYD+ EQRGIIIVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 121  TSKDLYSSDHTVVPVDFSDSS--GYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 837  WSPAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPEAYT 658
            WSPAATVTFMYEP+IHINEDLM++LSLEE+ S+VESSPTKVFDIDPNTQQVVVVDPEAYT
Sbjct: 179  WSPAATVTFMYEPDIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTQQVVVVDPEAYT 238

Query: 657  YDDEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 478
            YD+EVIK+A+SMGKPGLV I AKEDSF+FTVESTGA+KASQLVLNAIE+LKQKLDAVRLS
Sbjct: 239  YDEEVIKKAESMGKPGLVNIQAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLS 298

Query: 477  EDTVEADEQFGELGAHMRGG 418
            EDTVEAD+QFGELGAHMRGG
Sbjct: 299  EDTVEADDQFGELGAHMRGG 318


>ref|XP_012459245.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Gossypium raimondii] gi|763810754|gb|KJB77656.1|
            hypothetical protein B456_012G149200 [Gossypium
            raimondii]
          Length = 318

 Score =  583 bits (1504), Expect = e-163
 Identities = 291/320 (90%), Positives = 310/320 (96%)
 Frame = -1

Query: 1377 MEGNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 1198
            MEG SYQRFP+VKIRELKDDYAKFEL DTDASMANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGASYQRFPRVKIRELKDDYAKFELHDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1197 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 1018
            VLNDEFIAHRLGLIPLTS+RAM MRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSQRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 120

Query: 1017 TSKDLYSSDHTVVPVDFSDSSASGYDNPEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 838
            TSKDLYSSDHTVVPVDF+DS+  GY++ EQRGIIIVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 121  TSKDLYSSDHTVVPVDFTDSA--GYESSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 837  WSPAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPEAYT 658
            WSPAATVTFMYEPEIHINED+M  L+LEE+ SFV+SSPT+VFDIDPNTQQVVVVDPEAYT
Sbjct: 179  WSPAATVTFMYEPEIHINEDMMDTLTLEEKQSFVDSSPTRVFDIDPNTQQVVVVDPEAYT 238

Query: 657  YDDEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 478
            YDDEV+K+A++MGKPGLVEIYAKEDSF+FT+ESTGAVKA QLVLNAIE+LKQKLDAVRLS
Sbjct: 239  YDDEVLKKAEAMGKPGLVEIYAKEDSFIFTIESTGAVKAFQLVLNAIEILKQKLDAVRLS 298

Query: 477  EDTVEADEQFGELGAHMRGG 418
            EDTVEAD+QFGELGAHMRGG
Sbjct: 299  EDTVEADDQFGELGAHMRGG 318


>gb|KHG20623.1| DNA-directed RNA polymerase II subunit RPB3-A -like protein
            [Gossypium arboreum]
          Length = 318

 Score =  583 bits (1504), Expect = e-163
 Identities = 291/320 (90%), Positives = 310/320 (96%)
 Frame = -1

Query: 1377 MEGNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 1198
            MEG SYQRFP+VKIRELKDDYAKFEL DTDASMANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGASYQRFPRVKIRELKDDYAKFELHDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1197 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 1018
            VLNDEFIAHRLGLIPLTS+RAM MRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSQRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 120

Query: 1017 TSKDLYSSDHTVVPVDFSDSSASGYDNPEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 838
            TSKDLYSSDHTVVPVDF+D +  GY++ EQRGIIIVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 121  TSKDLYSSDHTVVPVDFTDYA--GYESSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 837  WSPAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPEAYT 658
            WSPAATVTFMYEPEIHINED+M  L+LEE+ SFV+SSPT+VFDIDPNTQQVVVVDPEAYT
Sbjct: 179  WSPAATVTFMYEPEIHINEDMMDTLTLEEKQSFVDSSPTRVFDIDPNTQQVVVVDPEAYT 238

Query: 657  YDDEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 478
            YDDEV+K+A++MGKPGLVEIYAKEDSF+FT+ESTGAVKASQLVLNAIE+LKQKLDAVRLS
Sbjct: 239  YDDEVLKKAEAMGKPGLVEIYAKEDSFIFTIESTGAVKASQLVLNAIEILKQKLDAVRLS 298

Query: 477  EDTVEADEQFGELGAHMRGG 418
            EDTVEAD+QFGELGAHMRGG
Sbjct: 299  EDTVEADDQFGELGAHMRGG 318


>ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citrus clementina]
            gi|568867393|ref|XP_006487022.1| PREDICTED: DNA-directed
            RNA polymerases II, IV and V subunit 3-like [Citrus
            sinensis] gi|557524889|gb|ESR36195.1| hypothetical
            protein CICLE_v10028849mg [Citrus clementina]
            gi|641840877|gb|KDO59794.1| hypothetical protein
            CISIN_1g020936mg [Citrus sinensis]
            gi|641840878|gb|KDO59795.1| hypothetical protein
            CISIN_1g020936mg [Citrus sinensis]
          Length = 319

 Score =  574 bits (1480), Expect = e-161
 Identities = 293/321 (91%), Positives = 308/321 (95%), Gaps = 1/321 (0%)
 Frame = -1

Query: 1377 MEGNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 1198
            M+G SYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MDGASYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1197 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 1018
            VLNDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCEFCSVEFHLRAKC SDQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120

Query: 1017 TSKDLYSSDHTVVPVDFSDSSASGYDNPEQ-RGIIIVKLRRGQELRLRAIARKGIGKDHA 841
            TSKDLYSSDH+VVPVDF D +  GYD+ +Q RGIIIVKLRRGQELRLRAIARKGIGKDHA
Sbjct: 121  TSKDLYSSDHSVVPVDFVDPA--GYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHA 178

Query: 840  KWSPAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPEAY 661
            KWSPAATVTFMYEPEIHINEDLM++LSLEE+ S+VESSPTKVFDIDPNT QV VVD EAY
Sbjct: 179  KWSPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAEAY 238

Query: 660  TYDDEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAVRL 481
            TYDDEVIK+A++MGKPGLVEIYAKEDSF+FTVESTGA+KASQLVLNAIEVLKQKLDAVRL
Sbjct: 239  TYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRL 298

Query: 480  SEDTVEADEQFGELGAHMRGG 418
            SEDTVEAD+QFGELGAHMRGG
Sbjct: 299  SEDTVEADDQFGELGAHMRGG 319


>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Vitis
            vinifera] gi|731383801|ref|XP_010647901.1| PREDICTED:
            DNA-directed RNA polymerases II, IV and V subunit 3
            [Vitis vinifera]
          Length = 318

 Score =  572 bits (1475), Expect = e-160
 Identities = 285/320 (89%), Positives = 311/320 (97%)
 Frame = -1

Query: 1377 MEGNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 1198
            MEG SYQRFPK+KIRE+KDDYAKFELR+TDASMANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 1197 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 1018
            VLNDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCEFCSVEFHLRAKC++D+TLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120

Query: 1017 TSKDLYSSDHTVVPVDFSDSSASGYDNPEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 838
            TSKDL SSDHTVVPVDFSDSS  GYD+ +++GIIIVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 121  TSKDLISSDHTVVPVDFSDSS--GYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 837  WSPAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPEAYT 658
            WSPAATVTFMYEPEIHINEDLM++L+LEE+TS+VESSPTKVFDID ++QQVVV D EAYT
Sbjct: 179  WSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYT 238

Query: 657  YDDEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 478
            YDDEV+K+A++MGKPGLVEIYAKEDSF+FTVESTGA+KASQLVLNAI+VLKQKLDAVRLS
Sbjct: 239  YDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLS 298

Query: 477  EDTVEADEQFGELGAHMRGG 418
            EDTVEAD+QFGELGAHMRGG
Sbjct: 299  EDTVEADDQFGELGAHMRGG 318


>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
          Length = 318

 Score =  572 bits (1475), Expect = e-160
 Identities = 285/320 (89%), Positives = 311/320 (97%)
 Frame = -1

Query: 1377 MEGNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 1198
            MEG SYQRFPK+KIRE+KDDYAKFELR+TDASMANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 1197 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 1018
            VLNDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCEFCSVEFHLRAKC++D+TLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120

Query: 1017 TSKDLYSSDHTVVPVDFSDSSASGYDNPEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 838
            TSKDL SSDHTVVPVDFSDSS  GYD+ +++GIIIVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 121  TSKDLISSDHTVVPVDFSDSS--GYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 837  WSPAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPEAYT 658
            WSPAATVTFMYEPEIHINEDLM++L+LEE+TS+VESSPTKVFDID ++QQVVV D EAYT
Sbjct: 179  WSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYT 238

Query: 657  YDDEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 478
            YDDEV+K+A++MGKPGLVEIYAKEDSF+FTVESTGA+KASQLVLNAI+VLKQKLDAVRLS
Sbjct: 239  YDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLS 298

Query: 477  EDTVEADEQFGELGAHMRGG 418
            EDTVEAD+QFGELGAHMRGG
Sbjct: 299  EDTVEADDQFGELGAHMRGG 318


>ref|XP_010065975.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Eucalyptus grandis] gi|629097957|gb|KCW63722.1|
            hypothetical protein EUGRSUZ_G01370 [Eucalyptus grandis]
          Length = 321

 Score =  560 bits (1442), Expect = e-156
 Identities = 280/318 (88%), Positives = 303/318 (95%)
 Frame = -1

Query: 1371 GNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVL 1192
            G SYQRFP VK+RE KDDY KFELR TDAS+ANALRRVMIAEVPTIAIDLVEIEVNSSVL
Sbjct: 6    GASYQRFPVVKVRETKDDYLKFELRGTDASVANALRRVMIAEVPTIAIDLVEIEVNSSVL 65

Query: 1191 NDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDVTS 1012
            NDEFIAHRLGL+PLTS+RAM MRFSRDCDACDGDGQCEFCSVEFHLRAKC++DQTLDVTS
Sbjct: 66   NDEFIAHRLGLVPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLDVTS 125

Query: 1011 KDLYSSDHTVVPVDFSDSSASGYDNPEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 832
            KDL SSDHTVVPVDFSD+ A   D+ EQ+GI IVKLRRGQELRLRAIARKGIGKDHAKWS
Sbjct: 126  KDLISSDHTVVPVDFSDALAD--DSAEQKGITIVKLRRGQELRLRAIARKGIGKDHAKWS 183

Query: 831  PAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPEAYTYD 652
            PAATVTFMYEPEIHINEDL++ LSLEE+ S+VESSPTKVFDIDPNT+QV+VVDPEAYTYD
Sbjct: 184  PAATVTFMYEPEIHINEDLVETLSLEEKQSWVESSPTKVFDIDPNTEQVLVVDPEAYTYD 243

Query: 651  DEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAVRLSED 472
            +EVIK+A++MGKPGLVEIYAKEDSF+FTVESTGA+KASQLVLNAI+VLKQKLDAVRLSED
Sbjct: 244  EEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSED 303

Query: 471  TVEADEQFGELGAHMRGG 418
            TVEAD+QFGELGAHMRGG
Sbjct: 304  TVEADDQFGELGAHMRGG 321


>ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polypeptide B family protein
            [Populus trichocarpa] gi|550331423|gb|EEE87820.2|
            DNA-directed RNA polymerase II 36 kDa polypeptide B
            family protein [Populus trichocarpa]
          Length = 323

 Score =  558 bits (1439), Expect = e-156
 Identities = 282/323 (87%), Positives = 305/323 (94%), Gaps = 3/323 (0%)
 Frame = -1

Query: 1377 MEGNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 1198
            ME  SYQRFPK+KIRE+KDDY KFELR+TDASMANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MESVSYQRFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1197 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 1018
            VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCE+CSVEFHLRAKCI+DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 120

Query: 1017 TSKDLYSSDHTVVPVDFSDSSASG--YDNPE-QRGIIIVKLRRGQELRLRAIARKGIGKD 847
            TSKDLYSSDH V+PVDFSD S +   +D+ E QRGIIIVKLRRGQELRLRAIARKGIGKD
Sbjct: 121  TSKDLYSSDHAVIPVDFSDPSDANDPFDHTETQRGIIIVKLRRGQELRLRAIARKGIGKD 180

Query: 846  HAKWSPAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPE 667
            HAKWSPAATVTFMYEPEIHINEDLM+ L+LEE+ S++ESSPTKVFDID  TQQVVVVDPE
Sbjct: 181  HAKWSPAATVTFMYEPEIHINEDLMETLTLEEKLSWIESSPTKVFDIDKVTQQVVVVDPE 240

Query: 666  AYTYDDEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAV 487
            AYTYDDEVIK+A++MGK GL++I AKEDSF+FTVESTGAVKASQLVLNAIE+LKQKLDAV
Sbjct: 241  AYTYDDEVIKKAEAMGKRGLIDIRAKEDSFIFTVESTGAVKASQLVLNAIEILKQKLDAV 300

Query: 486  RLSEDTVEADEQFGELGAHMRGG 418
            RLS+DTVEAD+QFGELG HMRGG
Sbjct: 301  RLSDDTVEADDQFGELGVHMRGG 323


>ref|XP_012065701.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            isoform X1 [Jatropha curcas] gi|643741758|gb|KDP47129.1|
            hypothetical protein JCGZ_22125 [Jatropha curcas]
          Length = 317

 Score =  558 bits (1438), Expect = e-156
 Identities = 282/320 (88%), Positives = 302/320 (94%)
 Frame = -1

Query: 1377 MEGNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 1198
            M+G SYQRFPKVKIRELKDDY KF L DTD+SMANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MDGASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1197 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 1018
            VLNDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCE+CSVEFHLRAKCI+DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 120

Query: 1017 TSKDLYSSDHTVVPVDFSDSSASGYDNPEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 838
            TSKDLYSSDHTV+PVDFSDS   GY++ EQRGIIIVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 121  TSKDLYSSDHTVIPVDFSDS---GYESNEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 177

Query: 837  WSPAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPEAYT 658
            WSPAATVTFMYEP+IHINEDLM+ L+LEE+ S+VESSPTKVF IDP TQQV V D E YT
Sbjct: 178  WSPAATVTFMYEPDIHINEDLMETLTLEEKQSWVESSPTKVFTIDPVTQQVKVEDHELYT 237

Query: 657  YDDEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 478
            YDDEVIK+A++MGKPGLV+I AKED+F+FTVESTGA+KASQLVLNAIEVLKQKLDAVRLS
Sbjct: 238  YDDEVIKKAEAMGKPGLVDIRAKEDTFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLS 297

Query: 477  EDTVEADEQFGELGAHMRGG 418
            EDTVEAD+QFGELGAHMRGG
Sbjct: 298  EDTVEADDQFGELGAHMRGG 317


>ref|XP_008441761.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV
            and V subunit 3-like [Cucumis melo]
          Length = 320

 Score =  556 bits (1434), Expect = e-155
 Identities = 276/320 (86%), Positives = 305/320 (95%)
 Frame = -1

Query: 1377 MEGNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 1198
            MEG+SYQRFPKVKIREL+DDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1197 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 1018
            VLNDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCEFCSVEFHLRAKC SDQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120

Query: 1017 TSKDLYSSDHTVVPVDFSDSSASGYDNPEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 838
            TSKDLYSSDHTVVPVDFSDS+A+  +  + +GIIIVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 121  TSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAK 180

Query: 837  WSPAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPEAYT 658
            WSPAATVTFMYEP IHINEDLM+ L+LEE+ ++VES PT+VF++DP T QV+VV+PEAYT
Sbjct: 181  WSPAATVTFMYEPSIHINEDLMETLTLEEKXTWVESCPTRVFELDPVTHQVMVVEPEAYT 240

Query: 657  YDDEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 478
            YDDEVIK+A++MGK GLV+I A+EDSF+FTVESTGA+KASQL+LNAI++LKQKLDAVRLS
Sbjct: 241  YDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS 300

Query: 477  EDTVEADEQFGELGAHMRGG 418
            +DTVEAD+QFGELGAHMRGG
Sbjct: 301  DDTVEADDQFGELGAHMRGG 320


>ref|XP_011000984.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Populus euphratica] gi|743794734|ref|XP_011000991.1|
            PREDICTED: DNA-directed RNA polymerases II, IV and V
            subunit 3-like [Populus euphratica]
          Length = 323

 Score =  555 bits (1430), Expect = e-155
 Identities = 280/323 (86%), Positives = 303/323 (93%), Gaps = 3/323 (0%)
 Frame = -1

Query: 1377 MEGNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 1198
            ME  SYQRFPK+KIRE+KDDY KFELR+TDASMANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MESVSYQRFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1197 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 1018
            VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCE+CSVEFHLRAKCI+DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 120

Query: 1017 TSKDLYSSDHTVVPVDFSDSSASG--YDNPE-QRGIIIVKLRRGQELRLRAIARKGIGKD 847
            TSKDLYSSDH V PVDFSD S     +++ E QRGIIIVKLRRGQELRLRAIARKGIGKD
Sbjct: 121  TSKDLYSSDHAVTPVDFSDPSDDNDPFEHTETQRGIIIVKLRRGQELRLRAIARKGIGKD 180

Query: 846  HAKWSPAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPE 667
            HAKWSPAATVTFMYEPEIHINEDLM+ L+LEE+ S++ESSPTKVFDID  TQQVVVVDPE
Sbjct: 181  HAKWSPAATVTFMYEPEIHINEDLMETLTLEEKLSWIESSPTKVFDIDKVTQQVVVVDPE 240

Query: 666  AYTYDDEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAV 487
            AYTYDDEVIK+A++MGK GL++I AKEDSF+FTVESTGA+KASQLVLNAIE+LKQKLDAV
Sbjct: 241  AYTYDDEVIKKAEAMGKRGLIDIRAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAV 300

Query: 486  RLSEDTVEADEQFGELGAHMRGG 418
            RLS+DTVEAD+QFGELG HMRGG
Sbjct: 301  RLSDDTVEADDQFGELGVHMRGG 323


>ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Cucumis sativus] gi|700206224|gb|KGN61343.1|
            hypothetical protein Csa_2G093850 [Cucumis sativus]
          Length = 320

 Score =  555 bits (1430), Expect = e-155
 Identities = 276/320 (86%), Positives = 304/320 (95%)
 Frame = -1

Query: 1377 MEGNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 1198
            MEG+SYQRFPKVKIREL+DDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1197 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 1018
            VLNDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCEFCSVEFHLRAKC SDQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120

Query: 1017 TSKDLYSSDHTVVPVDFSDSSASGYDNPEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 838
            TSKDLYSSDHTVVPVDFSDS+A+  +  + +GIIIVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 121  TSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAK 180

Query: 837  WSPAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPEAYT 658
            WSPAATVTFMYEP IHINEDLM+ L+LEE+ ++VES PT+VF++D  T QV+VVDPEAYT
Sbjct: 181  WSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYT 240

Query: 657  YDDEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 478
            YDDEVIK+A++MGK GLV+I A+EDSF+FTVESTGA+KASQL+LNAI++LKQKLDAVRLS
Sbjct: 241  YDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS 300

Query: 477  EDTVEADEQFGELGAHMRGG 418
            +DTVEAD+QFGELGAHMRGG
Sbjct: 301  DDTVEADDQFGELGAHMRGG 320


>ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Solanum lycopersicum]
          Length = 319

 Score =  555 bits (1429), Expect = e-155
 Identities = 272/320 (85%), Positives = 306/320 (95%)
 Frame = -1

Query: 1377 MEGNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 1198
            MEG SYQRFPK+K+RE+KDD+ KFELRDTDAS+ANALRR+MIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPKIKVREVKDDFMKFELRDTDASIANALRRIMIAEVPTIAIDLVEIEVNSS 60

Query: 1197 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 1018
            VLNDEFI+HRLGL+PLTSERAM MRFSRDCDACDGDGQCE+CSVEF+LR KC+SDQTLDV
Sbjct: 61   VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120

Query: 1017 TSKDLYSSDHTVVPVDFSDSSASGYDNPEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 838
            TSKDL SSDHTVVPVD+SD+S+S +DN   +GIIIVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 121  TSKDLLSSDHTVVPVDYSDASSS-FDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAK 179

Query: 837  WSPAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPEAYT 658
            WSPAATVTFMYEPEI+INED+M++L+LEE+T  VESSPTKVF IDP  +QV+VVDPEAYT
Sbjct: 180  WSPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVFGIDPENKQVIVVDPEAYT 239

Query: 657  YDDEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 478
            YDDEV+K+A++MGKPG+VEI+AKEDSF+FTVE+TGAVKASQLVLNAIEVLKQKLDAVRLS
Sbjct: 240  YDDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLS 299

Query: 477  EDTVEADEQFGELGAHMRGG 418
            +DTVEAD+QFGELGAHMRGG
Sbjct: 300  DDTVEADDQFGELGAHMRGG 319


>ref|XP_011092547.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Sesamum indicum]
          Length = 319

 Score =  554 bits (1428), Expect = e-155
 Identities = 276/320 (86%), Positives = 302/320 (94%)
 Frame = -1

Query: 1377 MEGNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 1198
            MEG SYQRFPK+KIR ++DD+ KFELRDTDAS+ANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPKIKIRTVRDDFMKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1197 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 1018
            VLNDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCE+CSVEFHLRAKCI+DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 120

Query: 1017 TSKDLYSSDHTVVPVDFSDSSASGYDNPEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 838
            TSKDLYSSDHTVVPVDFSDSS +G+DN E RGIIIVKLRRGQEL LRAIARKGIGKDHAK
Sbjct: 121  TSKDLYSSDHTVVPVDFSDSS-TGFDNTENRGIIIVKLRRGQELVLRAIARKGIGKDHAK 179

Query: 837  WSPAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPEAYT 658
            WSPAATVTFMYEPEI+INE++M+ L+LEE+  FV+SSPTKVFDI+PNT QV V D EAYT
Sbjct: 180  WSPAATVTFMYEPEIYINEEMMEGLTLEEKKEFVDSSPTKVFDINPNTHQVYVHDAEAYT 239

Query: 657  YDDEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 478
            YDDEV+K+A++MGKPGLVEI+AKEDSF+FTVE+TG +KASQL LNAI+VLKQKLDAVRLS
Sbjct: 240  YDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKASQLFLNAIDVLKQKLDAVRLS 299

Query: 477  EDTVEADEQFGELGAHMRGG 418
             DTVEADEQFGELGAHMRGG
Sbjct: 300  SDTVEADEQFGELGAHMRGG 319


>ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Solanum tuberosum]
          Length = 319

 Score =  553 bits (1426), Expect = e-154
 Identities = 272/320 (85%), Positives = 306/320 (95%)
 Frame = -1

Query: 1377 MEGNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 1198
            MEG SYQRFPK+KIRE+KDD+ KFELR+TDAS+ANALRR+MIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPKIKIREVKDDFMKFELRETDASIANALRRIMIAEVPTIAIDLVEIEVNSS 60

Query: 1197 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 1018
            VLNDEFI+HRLGL+PLTSERAM MRFSRDCDACDGDGQCE+CSVEF+LR KC+SDQTLDV
Sbjct: 61   VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120

Query: 1017 TSKDLYSSDHTVVPVDFSDSSASGYDNPEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 838
            TSKDL SSDHTVVPVD+SD+S+S +DN   +GIIIVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 121  TSKDLLSSDHTVVPVDYSDTSSS-FDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAK 179

Query: 837  WSPAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPEAYT 658
            WSPAATVTFMYEPEI+INED+M++L+LEE+T  VESSPTKVF IDP  +QV+VVDPEAYT
Sbjct: 180  WSPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVFGIDPENKQVIVVDPEAYT 239

Query: 657  YDDEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 478
            YDDEV+K+A++MGKPG+VEI+AKEDSF+FTVE+TGAVKASQLVLNAIEVLKQKLDAVRLS
Sbjct: 240  YDDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLS 299

Query: 477  EDTVEADEQFGELGAHMRGG 418
            +DTVEAD+QFGELGAHMRGG
Sbjct: 300  DDTVEADDQFGELGAHMRGG 319


>ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Fragaria vesca subsp. vesca]
          Length = 318

 Score =  553 bits (1425), Expect = e-154
 Identities = 274/320 (85%), Positives = 304/320 (95%)
 Frame = -1

Query: 1377 MEGNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 1198
            MEG SYQRFP+VKIRE++ DY KFELRDTDAS+ANALRRVMIAEVPT+AIDLVEIE+NSS
Sbjct: 1    MEGKSYQRFPRVKIREMRHDYLKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSS 60

Query: 1197 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 1018
            VLNDEFIAHRLGLIPLTS+RAM MRFSRDCDACDGDGQCE+CSVEFHLRA+C SDQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEYCSVEFHLRARCHSDQTLDV 120

Query: 1017 TSKDLYSSDHTVVPVDFSDSSASGYDNPEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 838
            TSK+L SSDHTVVPVDFSD  ASGY+  EQRGIIIVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 121  TSKELLSSDHTVVPVDFSD--ASGYEASEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 837  WSPAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPEAYT 658
            WSPAATVTFMYEP+I INE++M  LSLE++ ++V+SSPTKVF+IDPNT +VVVVDPEAYT
Sbjct: 179  WSPAATVTFMYEPDIRINEEMMDTLSLEDKAAWVDSSPTKVFEIDPNTGKVVVVDPEAYT 238

Query: 657  YDDEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 478
            YDDEVIK+A++MGKPGLV+I AKEDSF+FTVESTGA+KASQL+LNAIE+LKQKLDAVRLS
Sbjct: 239  YDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEILKQKLDAVRLS 298

Query: 477  EDTVEADEQFGELGAHMRGG 418
            EDTVEAD+QFGELGAHMRGG
Sbjct: 299  EDTVEADDQFGELGAHMRGG 318


>ref|XP_008236569.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV
            and V subunit 3-like [Prunus mume]
          Length = 318

 Score =  552 bits (1422), Expect = e-154
 Identities = 276/320 (86%), Positives = 302/320 (94%)
 Frame = -1

Query: 1377 MEGNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 1198
            MEG SYQR P+VKIRE++DDY KFELRDTDAS+ANALRRVMIAEVPT+AIDLVEIE+NSS
Sbjct: 1    MEGKSYQRLPRVKIREMRDDYMKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSS 60

Query: 1197 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 1018
            VLNDEFIAHRLGLIPLTS RAM MRFSRDCDACDGDGQCEFCSVEFHLRAKC SDQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSARAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120

Query: 1017 TSKDLYSSDHTVVPVDFSDSSASGYDNPEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 838
            TSKDL SSDHTVVPVDFSDS+  G ++ EQ+GIIIVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 121  TSKDLLSSDHTVVPVDFSDSA--GMESSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 837  WSPAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPEAYT 658
            WSPAATVTFMYEP+I INE+LM  L+L+E+ ++VESSPTKVFD DP T++VVVVDPEAYT
Sbjct: 179  WSPAATVTFMYEPDIXINEELMDMLTLDEKKAWVESSPTKVFDFDPKTEKVVVVDPEAYT 238

Query: 657  YDDEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 478
            YDDEVIK+A++MGKPGLV+I AKEDSF+FTVESTGAVKASQL+LNAIEVLKQKLDAVRLS
Sbjct: 239  YDDEVIKKAEAMGKPGLVDIIAKEDSFIFTVESTGAVKASQLLLNAIEVLKQKLDAVRLS 298

Query: 477  EDTVEADEQFGELGAHMRGG 418
            EDTVEAD+QFGELGAHMRGG
Sbjct: 299  EDTVEADDQFGELGAHMRGG 318


>ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Cicer arietinum]
          Length = 319

 Score =  552 bits (1422), Expect = e-154
 Identities = 276/320 (86%), Positives = 303/320 (94%)
 Frame = -1

Query: 1377 MEGNSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 1198
            MEG SY R P+VKIRELKDDY KFELRDTDAS+ANALRRVMI+EVPTIAIDLVEIEVNSS
Sbjct: 1    MEGASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTIAIDLVEIEVNSS 60

Query: 1197 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 1018
            VLNDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCE+CSVEFHLR KCI+DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLDV 120

Query: 1017 TSKDLYSSDHTVVPVDFSDSSASGYDNPEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 838
            TSKDLYSSDHTVVPVDFS +  S  ++ + RGIIIVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 121  TSKDLYSSDHTVVPVDFS-ADPSSLESSDGRGIIIVKLRRGQELRLRAIARKGIGKDHAK 179

Query: 837  WSPAATVTFMYEPEIHINEDLMQALSLEERTSFVESSPTKVFDIDPNTQQVVVVDPEAYT 658
            WSPAATVTFMYEP+IHINEDLM++L+LEE+  +V+SSPT+VFDIDP TQQV+VVDPEAY+
Sbjct: 180  WSPAATVTFMYEPDIHINEDLMESLTLEEKREWVDSSPTRVFDIDPVTQQVMVVDPEAYS 239

Query: 657  YDDEVIKQAQSMGKPGLVEIYAKEDSFVFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 478
            YDDEVIK+A++MGKPGLVEI AK+DSF+FTVESTGAVKASQL+LNAIE+LKQKLDAVRLS
Sbjct: 240  YDDEVIKKAEAMGKPGLVEITAKQDSFIFTVESTGAVKASQLLLNAIEILKQKLDAVRLS 299

Query: 477  EDTVEADEQFGELGAHMRGG 418
            EDTVEAD+QFGELGAHMRGG
Sbjct: 300  EDTVEADDQFGELGAHMRGG 319