BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00008601
         (819 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containi...   362   2e-97
ref|XP_012083448.1| PREDICTED: pentatricopeptide repeat-containi...   312   2e-82
ref|XP_006372219.1| pentatricopeptide repeat-containing family p...   311   5e-82
ref|XP_008223943.1| PREDICTED: pentatricopeptide repeat-containi...   301   3e-79
ref|XP_011017612.1| PREDICTED: pentatricopeptide repeat-containi...   301   5e-79
ref|XP_007222454.1| hypothetical protein PRUPE_ppa006191mg [Prun...   299   2e-78
ref|XP_004301396.1| PREDICTED: pentatricopeptide repeat-containi...   296   2e-77
ref|XP_002511816.1| pentatricopeptide repeat-containing protein,...   292   2e-76
ref|XP_010252200.1| PREDICTED: pentatricopeptide repeat-containi...   287   6e-75
ref|XP_012451219.1| PREDICTED: pentatricopeptide repeat-containi...   287   7e-75
ref|XP_009362024.1| PREDICTED: pentatricopeptide repeat-containi...   286   2e-74
ref|XP_009362023.1| PREDICTED: pentatricopeptide repeat-containi...   286   2e-74
ref|XP_006453186.1| hypothetical protein CICLE_v10010414mg [Citr...   273   1e-70
ref|XP_008360488.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   268   5e-69
emb|CAN79718.1| hypothetical protein VITISV_012741 [Vitis vinifera]   263   9e-68
ref|XP_006360648.1| PREDICTED: pentatricopeptide repeat-containi...   254   5e-65
ref|XP_008450656.1| PREDICTED: pentatricopeptide repeat-containi...   251   6e-64
ref|XP_007014560.1| Pentatricopeptide repeat superfamily protein...   251   6e-64
ref|XP_004240282.2| PREDICTED: pentatricopeptide repeat-containi...   249   1e-63
ref|XP_011648974.1| PREDICTED: pentatricopeptide repeat-containi...   248   3e-63

>ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           [Vitis vinifera] gi|731408045|ref|XP_010656709.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630 [Vitis vinifera] gi|297736023|emb|CBI24061.3|
           unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  362 bits (929), Expect = 2e-97
 Identities = 178/251 (70%), Positives = 212/251 (84%), Gaps = 1/251 (0%)
 Frame = -2

Query: 752 PLCVLKTLNSKRFRVCFQKKDSPDRALARKIVWHWKRERGVVHRERHINCVSLIQTLSRK 573
           PLC++ +  ++RFRV   +  SP+RALARK+ WHWK+ER V  ++ +++   LIQ LSRK
Sbjct: 9   PLCLIGSHKTQRFRVSLHQNYSPNRALARKLFWHWKQERSVDGKDNYVDYTPLIQALSRK 68

Query: 572 KLPRVAQELLLEMKSEGFVLDNSTLSALMLCYVDNGFFPEAQAIWDEILNSS-APNIQII 396
           +LP VAQELL EMKSEGF+ +NSTLSALMLCY DNG FP+AQA+WDEI+NSS  PNIQI+
Sbjct: 69  RLPHVAQELLFEMKSEGFLPNNSTLSALMLCYADNGLFPKAQALWDEIINSSFGPNIQIV 128

Query: 395 SGLIDAYGRTGHFDKVIRILHQISSRDFNILPKIYALAISCFGKGGQLEMMENTLKEMVS 216
           S LIDAYG+ GHF +V RILHQ+SSRDFN + ++Y+LAISCFGKGGQLEMMEN LKEMVS
Sbjct: 129 SKLIDAYGKMGHFGEVTRILHQVSSRDFNFMHEVYSLAISCFGKGGQLEMMENALKEMVS 188

Query: 215 RGFSIDSATGNSLIIYYSIFGSLSEMEAAYCSLKSSRILIEREGIRAMSFAYIKERKFYV 36
           RGF +DSATGN+ I YYSIFGSL+EMEAAY  LK SRILIE EGIRAMSFAYIKE+K+Y 
Sbjct: 189 RGFPVDSATGNAFIRYYSIFGSLTEMEAAYDRLKKSRILIEEEGIRAMSFAYIKEKKYYR 248

Query: 35  LGEFLRDVGLG 3
           LG+FLRDVGLG
Sbjct: 249 LGQFLRDVGLG 259


>ref|XP_012083448.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           isoform X1 [Jatropha curcas] gi|643717042|gb|KDP28668.1|
           hypothetical protein JCGZ_14439 [Jatropha curcas]
          Length = 429

 Score =  312 bits (800), Expect = 2e-82
 Identities = 159/266 (59%), Positives = 211/266 (79%), Gaps = 3/266 (1%)
 Frame = -2

Query: 791 MEALSPVCVSVTRPLCVLKTLNSKR--FRVCFQKKDSPDRALARKIVWHWKRERGVVHRE 618
           MEA S +  S T PLC++ ++ +KR  FRV F ++   +RALARKI+W WK+ R V  +E
Sbjct: 1   MEAQSVIACS-TSPLCLVGSVKTKRTRFRVFFSQRKPTNRALARKIIWQWKQGRSVYGKE 59

Query: 617 RHINCVSLIQTLSRKKLPRVAQELLLEMKSEGFVLDNSTLSALMLCYVDNGFFPEAQAIW 438
             ++C SL+QTL +K++  +A ELLLEMKS+G+V  NSTLSA+M+CY +NG  P+AQ+IW
Sbjct: 60  IFVDCASLVQTLGKKRMTHLADELLLEMKSQGYVPSNSTLSAMMICYAENGLLPQAQSIW 119

Query: 437 DEILNSS-APNIQIISGLIDAYGRTGHFDKVIRILHQISSRDFNILPKIYALAISCFGKG 261
           +EIL++S  P+IQI+S LI AYG++G F++V +IL Q+S  +F+ L + Y+LAISCFG G
Sbjct: 120 EEILSTSFEPSIQIVSELISAYGKSGQFNEVKKILDQLSYSNFSSLHEAYSLAISCFGNG 179

Query: 260 GQLEMMENTLKEMVSRGFSIDSATGNSLIIYYSIFGSLSEMEAAYCSLKSSRILIEREGI 81
           GQ+++MENTLKEMVSRGFS+D ATGN+ I YYSI GSL+EME+A   LK SR LI+REGI
Sbjct: 180 GQIQLMENTLKEMVSRGFSVDFATGNTFIKYYSIHGSLTEMESACNRLKRSRHLIDREGI 239

Query: 80  RAMSFAYIKERKFYVLGEFLRDVGLG 3
           RAM+FA+I+ERKFY LGEFLRDVGLG
Sbjct: 240 RAMAFAFIRERKFYRLGEFLRDVGLG 265


>ref|XP_006372219.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550318750|gb|ERP50016.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 428

 Score =  311 bits (796), Expect = 5e-82
 Identities = 156/249 (62%), Positives = 201/249 (80%), Gaps = 2/249 (0%)
 Frame = -2

Query: 743 VLKTLNSKRFRVCFQKKDSPDRALARKIVWHWKRERGVVHRERHINCVSLIQTLSRKKLP 564
           V+ +   KRF +   K+D   RALA+K++  WKR++GV  +E   +C SLIQTL + + P
Sbjct: 16  VIGSYKPKRFAIFSIKRDPKKRALAQKMIRQWKRDQGVFGKETCADCASLIQTLCKHRRP 75

Query: 563 RVAQELLLEMKSEGFVLDNSTLSALMLCYVDNGFFPEAQAIWDEILNSS-APNIQIISGL 387
            +A+ELLLE+K EGF+ DN TLSA+MLCY D+G  P+AQAIW+E+L SS  P++Q+IS L
Sbjct: 76  HLAEELLLELKCEGFLPDNRTLSAMMLCYADSGLLPQAQAIWEEMLYSSFVPSVQVISDL 135

Query: 386 IDAYGRTGHFDKVIRILHQISS-RDFNILPKIYALAISCFGKGGQLEMMENTLKEMVSRG 210
           ID Y ++G FD+VI+IL Q+SS R F+ LP++Y+LAISCFGKGGQLE+ME+TLK+MVS+G
Sbjct: 136 IDIYAKSGLFDEVIKILDQLSSLRTFDFLPQVYSLAISCFGKGGQLELMEDTLKKMVSKG 195

Query: 209 FSIDSATGNSLIIYYSIFGSLSEMEAAYCSLKSSRILIEREGIRAMSFAYIKERKFYVLG 30
           F +DSATGN+ ++YYS+ GSL+EMEAAY  LK SR+LIEREGIRAMSFAYIKERKFY L 
Sbjct: 196 FWVDSATGNAFVVYYSLHGSLAEMEAAYDRLKRSRLLIEREGIRAMSFAYIKERKFYGLS 255

Query: 29  EFLRDVGLG 3
           EFLRDVGLG
Sbjct: 256 EFLRDVGLG 264


>ref|XP_008223943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           [Prunus mume] gi|645234727|ref|XP_008223944.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630 [Prunus mume] gi|645234730|ref|XP_008223945.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630 [Prunus mume]
          Length = 423

 Score =  301 bits (772), Expect = 3e-79
 Identities = 152/249 (61%), Positives = 193/249 (77%), Gaps = 1/249 (0%)
 Frame = -2

Query: 746 CVLKTLNSKRFRVCFQKKDSPDRALARKIVWHWKRERGVVHRERHINCVSLIQTLSRKKL 567
           CV  +L  +       +  S  RALARKI+  WK+E     ++ +++CV LI++LSR+K+
Sbjct: 11  CVSSSLKPQHLSFSSHQPQSQSRALARKIIRKWKQEECFDGKDIYVDCVPLIRSLSRQKM 70

Query: 566 PRVAQELLLEMKSEGFVLDNSTLSALMLCYVDNGFFPEAQAIWDEILNSS-APNIQIISG 390
           P VAQELLLEMKS+G +  NSTLSALMLC+ +NG FP+A+AIWDE+L+SS  P+IQ++S 
Sbjct: 71  PHVAQELLLEMKSDGLLPSNSTLSALMLCHANNGLFPQAEAIWDEMLHSSFVPSIQVVSE 130

Query: 389 LIDAYGRTGHFDKVIRILHQISSRDFNILPKIYALAISCFGKGGQLEMMENTLKEMVSRG 210
           L DAYG  G F+KV  IL QI SR+ ++ P++Y+LAISCFGKGGQLE+ME TLKEM+SRG
Sbjct: 131 LFDAYGNVGCFEKVNEILAQIRSRNLSLFPEVYSLAISCFGKGGQLELMEGTLKEMISRG 190

Query: 209 FSIDSATGNSLIIYYSIFGSLSEMEAAYCSLKSSRILIEREGIRAMSFAYIKERKFYVLG 30
           F +DSATGN+ I YYSIFGSL+EME AY  LK SR LIE EGIRAMSFAY+K+RKFY L 
Sbjct: 191 FPLDSATGNAFIRYYSIFGSLTEMETAYGRLKRSRFLIEEEGIRAMSFAYLKKRKFYRLA 250

Query: 29  EFLRDVGLG 3
           E L++VGLG
Sbjct: 251 ELLKNVGLG 259


>ref|XP_011017612.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           [Populus euphratica]
          Length = 428

 Score =  301 bits (770), Expect = 5e-79
 Identities = 155/249 (62%), Positives = 195/249 (78%), Gaps = 2/249 (0%)
 Frame = -2

Query: 743 VLKTLNSKRFRVCFQKKDSPDRALARKIVWHWKRERGVVHRERHINCVSLIQTLSRKKLP 564
           V+ +   KRF     K+D   RALA+K++  WKR++GV  +E   +C SLIQTL   + P
Sbjct: 16  VIGSYKPKRFAAFSIKRDPKKRALAQKMIRQWKRDQGVFGKETCADCASLIQTLCMHRRP 75

Query: 563 RVAQELLLEMKSEGFVLDNSTLSALMLCYVDNGFFPEAQAIWDEILNSS-APNIQIISGL 387
            +A+ELLLE+K EGF+ DN TLSA+MLCY D G  P+AQAIW+E+L S+  P++Q+IS L
Sbjct: 76  HLAEELLLELKCEGFLPDNCTLSAMMLCYADCGLLPQAQAIWEEMLYSTFVPSVQLISDL 135

Query: 386 IDAYGRTGHFDKVIRILHQISS-RDFNILPKIYALAISCFGKGGQLEMMENTLKEMVSRG 210
           ID Y + G FD+VI+IL Q+SS R F+ LP++Y+LAISCFGKGGQLE+ME+TLK+MVS+G
Sbjct: 136 IDIYTKRGLFDEVIKILDQLSSLRTFDFLPQVYSLAISCFGKGGQLELMEDTLKKMVSKG 195

Query: 209 FSIDSATGNSLIIYYSIFGSLSEMEAAYCSLKSSRILIEREGIRAMSFAYIKERKFYVLG 30
           F +DSATGN+ ++YYSI GSL EMEAAY  LK SR+LIEREGIRAMSFAYIKERKFY L 
Sbjct: 196 FWVDSATGNAFVVYYSIHGSLVEMEAAYDRLKRSRLLIEREGIRAMSFAYIKERKFYRLS 255

Query: 29  EFLRDVGLG 3
           EFLR VGLG
Sbjct: 256 EFLRGVGLG 264


>ref|XP_007222454.1| hypothetical protein PRUPE_ppa006191mg [Prunus persica]
           gi|462419390|gb|EMJ23653.1| hypothetical protein
           PRUPE_ppa006191mg [Prunus persica]
          Length = 423

 Score =  299 bits (765), Expect = 2e-78
 Identities = 151/249 (60%), Positives = 192/249 (77%), Gaps = 1/249 (0%)
 Frame = -2

Query: 746 CVLKTLNSKRFRVCFQKKDSPDRALARKIVWHWKRERGVVHRERHINCVSLIQTLSRKKL 567
           CV  +L  +       +  S  RALARKI+  WK+E     +  +++CV LI++LSR+K+
Sbjct: 11  CVSSSLKPQHLSFSSHQPQSQSRALARKIIRKWKQEECFDGKGIYVDCVPLIRSLSRQKM 70

Query: 566 PRVAQELLLEMKSEGFVLDNSTLSALMLCYVDNGFFPEAQAIWDEILNSS-APNIQIISG 390
           P VAQEL+LEMKS+G +  NSTLSALMLC+ +NG FP+A+AIWDE+L+SS  P+IQ++S 
Sbjct: 71  PHVAQELVLEMKSDGLLPSNSTLSALMLCHANNGLFPQAEAIWDEMLHSSFVPSIQVVSE 130

Query: 389 LIDAYGRTGHFDKVIRILHQISSRDFNILPKIYALAISCFGKGGQLEMMENTLKEMVSRG 210
           L DAYG  G F+KV  IL QI SR+ ++ P++Y+LAISCFGKGGQLE+ME TLKEM+SRG
Sbjct: 131 LFDAYGNVGCFEKVNEILAQIRSRNLSLFPEVYSLAISCFGKGGQLELMEGTLKEMISRG 190

Query: 209 FSIDSATGNSLIIYYSIFGSLSEMEAAYCSLKSSRILIEREGIRAMSFAYIKERKFYVLG 30
           F +DSATGN+ I YYSIFGSL+EME AY  LK SR LIE EGIRAMSFAY+K+RKFY L 
Sbjct: 191 FPLDSATGNAFIRYYSIFGSLTEMETAYGRLKRSRFLIEEEGIRAMSFAYLKKRKFYRLA 250

Query: 29  EFLRDVGLG 3
           E L++VGLG
Sbjct: 251 ELLKNVGLG 259


>ref|XP_004301396.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           [Fragaria vesca subsp. vesca]
          Length = 424

 Score =  296 bits (757), Expect = 2e-77
 Identities = 154/246 (62%), Positives = 189/246 (76%), Gaps = 2/246 (0%)
 Frame = -2

Query: 734 TLNSKRFRVC-FQKKDSPDRALARKIVWHWKRERGVVHRERHINCVSLIQTLSRKKLPRV 558
           +LN  R  V   Q + S +RALARKIV  WK+E     ++ +++CV LIQ+LSR+K+P V
Sbjct: 15  SLNPNRLSVLSHQSQRSQNRALARKIVRTWKQEECSRGKDCYVDCVPLIQSLSRQKMPHV 74

Query: 557 AQELLLEMKSEGFVLDNSTLSALMLCYVDNGFFPEAQAIWDEILNSS-APNIQIISGLID 381
           AQE+LL MKSEG +  NSTLSA+MLC+  NG  P+A+AIWDE+LNSS  P IQ++S L D
Sbjct: 75  AQEVLLVMKSEGLIPSNSTLSAVMLCHAKNGLLPQAEAIWDEMLNSSFVPGIQVVSELFD 134

Query: 380 AYGRTGHFDKVIRILHQISSRDFNILPKIYALAISCFGKGGQLEMMENTLKEMVSRGFSI 201
            YG  G F KV  I+ QI SR+ ++LP++Y+LAISCFGKGGQLE+ME+TLKEMVSRGF +
Sbjct: 135 VYGNVGSFGKVNEIVGQIRSRNLSLLPQVYSLAISCFGKGGQLELMEDTLKEMVSRGFPV 194

Query: 200 DSATGNSLIIYYSIFGSLSEMEAAYCSLKSSRILIEREGIRAMSFAYIKERKFYVLGEFL 21
           DSATGN  I YYSIFGSL+EME AY  LK SR LIE EGIRAMS AY+K+RKFY L EFL
Sbjct: 195 DSATGNVFIRYYSIFGSLTEMETAYDRLKRSRFLIEEEGIRAMSLAYLKKRKFYSLAEFL 254

Query: 20  RDVGLG 3
           + VGLG
Sbjct: 255 KSVGLG 260


>ref|XP_002511816.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548996|gb|EEF50485.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 427

 Score =  292 bits (747), Expect = 2e-76
 Identities = 143/240 (59%), Positives = 190/240 (79%), Gaps = 1/240 (0%)
 Frame = -2

Query: 719 RFRVCFQKKDSPDRALARKIVWHWKRERGVVHRERHINCVSLIQTLSRKKLPRVAQELLL 540
           RFR+   ++D  +R LARKI++ WK+++    +E  ++C SL+Q L  K+ P +AQE+LL
Sbjct: 26  RFRLFSSQRDPTNRPLARKIIYQWKQDQSFSCKE--VDCASLVQNLHSKRTPHLAQEILL 83

Query: 539 EMKSEGFVLDNSTLSALMLCYVDNGFFPEAQAIWDEILNSS-APNIQIISGLIDAYGRTG 363
           EMKS+G+VL+N TLSA++LCY DNG  P+AQAIW  +LN S  P+IQI+S LIDAY + G
Sbjct: 84  EMKSQGYVLNNPTLSAILLCYADNGLLPQAQAIWKHMLNGSFTPSIQIVSRLIDAYSKKG 143

Query: 362 HFDKVIRILHQISSRDFNILPKIYALAISCFGKGGQLEMMENTLKEMVSRGFSIDSATGN 183
           HF++V+ IL Q+S  +F++L + Y+LAISCFGKGGQL++MEN LK+MV RGF +D ATGN
Sbjct: 144 HFNEVMNILDQLSYSNFSLLHEAYSLAISCFGKGGQLQLMENALKDMVLRGFPVDYATGN 203

Query: 182 SLIIYYSIFGSLSEMEAAYCSLKSSRILIEREGIRAMSFAYIKERKFYVLGEFLRDVGLG 3
           + I YYSI GSL++ME+AY  LK SR L++REGIRA+S AY+KERKFY LGEFLRDVGLG
Sbjct: 204 AFIRYYSIHGSLTDMESAYSRLKRSRHLVDREGIRAVSLAYVKERKFYRLGEFLRDVGLG 263


>ref|XP_010252200.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           isoform X1 [Nelumbo nucifera]
          Length = 426

 Score =  287 bits (735), Expect = 6e-75
 Identities = 144/263 (54%), Positives = 198/263 (75%), Gaps = 1/263 (0%)
 Frame = -2

Query: 791 MEALSPVCVSVTRPLCVLKTLNSKRFRVCFQKKDSPDRALARKIVWHWKRERGVVHRERH 612
           ME LS   +S +  L +  +L  K  R+  ++ DS + A  RKI W+WK+   +   +++
Sbjct: 1   MEVLS--FLSSSPSLLLFGSLKPKPSRLSLRQNDSSNPASIRKITWNWKKRGNIRGADKY 58

Query: 611 INCVSLIQTLSRKKLPRVAQELLLEMKSEGFVLDNSTLSALMLCYVDNGFFPEAQAIWDE 432
           +   SLI  L RK++P VA++L LEMKSEGF  + +TLSALMLCY DNG   +A++IWDE
Sbjct: 59  VELASLIHVLGRKRMPHVAEQLFLEMKSEGFQPNLATLSALMLCYADNGLLSQARSIWDE 118

Query: 431 ILNSS-APNIQIISGLIDAYGRTGHFDKVIRILHQISSRDFNILPKIYALAISCFGKGGQ 255
           I+NSS  PNI++++ L+DAY   G FD+++R+L+++ SRDFN+ P+IY+LAISCFGKGGQ
Sbjct: 119 IINSSFVPNIELVAYLMDAYRMMGRFDEIMRLLNEVISRDFNMCPQIYSLAISCFGKGGQ 178

Query: 254 LEMMENTLKEMVSRGFSIDSATGNSLIIYYSIFGSLSEMEAAYCSLKSSRILIEREGIRA 75
           LE+ME  +KEMVS G+++DSATGN+ I YYSIFGSL++ME AY  LK SRILIE +GIRA
Sbjct: 179 LELMEAMMKEMVSSGYAVDSATGNAFIEYYSIFGSLTDMEIAYGRLKRSRILIEEDGIRA 238

Query: 74  MSFAYIKERKFYVLGEFLRDVGL 6
           ++ AYI+++ FY LGEFLRDVGL
Sbjct: 239 VASAYIRKKSFYKLGEFLRDVGL 261


>ref|XP_012451219.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           [Gossypium raimondii] gi|763799158|gb|KJB66113.1|
           hypothetical protein B456_010G127600 [Gossypium
           raimondii]
          Length = 440

 Score =  287 bits (734), Expect = 7e-75
 Identities = 137/229 (59%), Positives = 180/229 (78%), Gaps = 2/229 (0%)
 Frame = -2

Query: 683 DRALARKIVWHWKRERGVVHRERHINCVSLIQTLSRKKLPRVAQELLLEMKSEGFVLDNS 504
           ++ L+RKI+W WKRE  ++ R+  ++C SL+QTL+RK++P +A +LLLE+ S+G + + +
Sbjct: 48  NQPLSRKIIWRWKREGRILRRDNLVDCASLVQTLARKRMPHIAHQLLLELNSQGLIPNTA 107

Query: 503 TLSALMLCYVDNGFFPEAQAIWDEILNSSA--PNIQIISGLIDAYGRTGHFDKVIRILHQ 330
           TLSALMLCY DNG F +A+AIW+E+LN S+  P I ++S  +DAYG  G F +V +IL  
Sbjct: 108 TLSALMLCYADNGLFTQAEAIWEEMLNISSFMPAIPLVSKFLDAYGNMGQFHRVQKILDH 167

Query: 329 ISSRDFNILPKIYALAISCFGKGGQLEMMENTLKEMVSRGFSIDSATGNSLIIYYSIFGS 150
           +    FN+LP++Y +AISCFGK GQL++MENTLKEMVS+G SIDSATGN+ + YYSIFGS
Sbjct: 168 VILHRFNLLPRVYPVAISCFGKHGQLDLMENTLKEMVSKGLSIDSATGNAFVRYYSIFGS 227

Query: 149 LSEMEAAYCSLKSSRILIEREGIRAMSFAYIKERKFYVLGEFLRDVGLG 3
           L+EME+AY   K SR LI+ EGIRAMSFAYIKE KFY LGEFL DVGLG
Sbjct: 228 LTEMESAYARFKRSRHLIDEEGIRAMSFAYIKEGKFYKLGEFLTDVGLG 276


>ref|XP_009362024.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           isoform X2 [Pyrus x bretschneideri]
          Length = 410

 Score =  286 bits (731), Expect = 2e-74
 Identities = 142/230 (61%), Positives = 180/230 (78%), Gaps = 1/230 (0%)
 Frame = -2

Query: 689 SPDRALARKIVWHWKRERGVVHRERHINCVSLIQTLSRKKLPRVAQELLLEMKSEGFVLD 510
           +P+RALARKI+  WKR+     +  +++CV +I++LS ++LP VAQELLLEMKS+G +  
Sbjct: 17  NPNRALARKIIRKWKRDECFNGQATYVDCVRIIRSLSEQRLPHVAQELLLEMKSDGLLPS 76

Query: 509 NSTLSALMLCYVDNGFFPEAQAIWDEILNSS-APNIQIISGLIDAYGRTGHFDKVIRILH 333
           NSTLSALMLC+ +NG FP+A+A+W+E+L SS  P+IQ++S L D YG  G F+KV  IL 
Sbjct: 77  NSTLSALMLCHANNGLFPQAEAVWNEMLYSSFVPSIQVVSQLFDVYGNAGCFEKVNEILG 136

Query: 332 QISSRDFNILPKIYALAISCFGKGGQLEMMENTLKEMVSRGFSIDSATGNSLIIYYSIFG 153
           QI +R  ++ P++Y LAISCFGKGGQLE+ME  LKEM+S GF +DSATGN+ I YYSIFG
Sbjct: 137 QIRARYLSLFPEVYLLAISCFGKGGQLELMEGALKEMISMGFPVDSATGNAFIRYYSIFG 196

Query: 152 SLSEMEAAYCSLKSSRILIEREGIRAMSFAYIKERKFYVLGEFLRDVGLG 3
           SL+EME AY  LK SR LIE EGIRAMSFAY+K  KFY L EFL+DVGLG
Sbjct: 197 SLTEMETAYGRLKRSRFLIEEEGIRAMSFAYLKRSKFYELAEFLKDVGLG 246


>ref|XP_009362023.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           isoform X1 [Pyrus x bretschneideri]
          Length = 412

 Score =  286 bits (731), Expect = 2e-74
 Identities = 142/230 (61%), Positives = 180/230 (78%), Gaps = 1/230 (0%)
 Frame = -2

Query: 689 SPDRALARKIVWHWKRERGVVHRERHINCVSLIQTLSRKKLPRVAQELLLEMKSEGFVLD 510
           +P+RALARKI+  WKR+     +  +++CV +I++LS ++LP VAQELLLEMKS+G +  
Sbjct: 19  NPNRALARKIIRKWKRDECFNGQATYVDCVRIIRSLSEQRLPHVAQELLLEMKSDGLLPS 78

Query: 509 NSTLSALMLCYVDNGFFPEAQAIWDEILNSS-APNIQIISGLIDAYGRTGHFDKVIRILH 333
           NSTLSALMLC+ +NG FP+A+A+W+E+L SS  P+IQ++S L D YG  G F+KV  IL 
Sbjct: 79  NSTLSALMLCHANNGLFPQAEAVWNEMLYSSFVPSIQVVSQLFDVYGNAGCFEKVNEILG 138

Query: 332 QISSRDFNILPKIYALAISCFGKGGQLEMMENTLKEMVSRGFSIDSATGNSLIIYYSIFG 153
           QI +R  ++ P++Y LAISCFGKGGQLE+ME  LKEM+S GF +DSATGN+ I YYSIFG
Sbjct: 139 QIRARYLSLFPEVYLLAISCFGKGGQLELMEGALKEMISMGFPVDSATGNAFIRYYSIFG 198

Query: 152 SLSEMEAAYCSLKSSRILIEREGIRAMSFAYIKERKFYVLGEFLRDVGLG 3
           SL+EME AY  LK SR LIE EGIRAMSFAY+K  KFY L EFL+DVGLG
Sbjct: 199 SLTEMETAYGRLKRSRFLIEEEGIRAMSFAYLKRSKFYELAEFLKDVGLG 248


>ref|XP_006453186.1| hypothetical protein CICLE_v10010414mg [Citrus clementina]
           gi|568840749|ref|XP_006474328.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like isoform X1 [Citrus sinensis]
           gi|568840751|ref|XP_006474329.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like isoform X2 [Citrus sinensis]
           gi|568840753|ref|XP_006474330.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like isoform X3 [Citrus sinensis]
           gi|568840755|ref|XP_006474331.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like isoform X4 [Citrus sinensis]
           gi|568840757|ref|XP_006474332.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like isoform X5 [Citrus sinensis]
           gi|568840759|ref|XP_006474333.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like isoform X6 [Citrus sinensis]
           gi|557556412|gb|ESR66426.1| hypothetical protein
           CICLE_v10010414mg [Citrus clementina]
           gi|641843127|gb|KDO62029.1| hypothetical protein
           CISIN_1g040580mg [Citrus sinensis]
          Length = 412

 Score =  273 bits (697), Expect = 1e-70
 Identities = 140/241 (58%), Positives = 185/241 (76%), Gaps = 1/241 (0%)
 Frame = -2

Query: 722 KRFRVCFQKKDSPDRALARKIVWHWKRERGVVHRERHINCVSLIQTLSRKKLPRVAQELL 543
           KRF V   +    +  LARKI+ + K+E         ++C SL++ L RKK P +A +L+
Sbjct: 15  KRFNVPSHQTHPKNGDLARKIIRYRKQEG-------FVDCASLVEDLGRKKKPHLAHQLV 67

Query: 542 LEMKSEGFVLDNSTLSALMLCYVDNGFFPEAQAIWDEILNSS-APNIQIISGLIDAYGRT 366
             +KSEG + DNSTL ALMLCY +NGF  EAQ +W+E+L+SS   ++Q++S L+DAYGR 
Sbjct: 68  NTVKSEGLLPDNSTLCALMLCYANNGFVLEAQVVWEELLSSSFVLSVQVLSDLMDAYGRI 127

Query: 365 GHFDKVIRILHQISSRDFNILPKIYALAISCFGKGGQLEMMENTLKEMVSRGFSIDSATG 186
           G F+++I I+ Q+S R+ ++LP++Y+ AISCFGK GQLE+MENTLKEMVSRGFS+DSATG
Sbjct: 128 GCFNEIISIIDQVSCRNADLLPEVYSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATG 187

Query: 185 NSLIIYYSIFGSLSEMEAAYCSLKSSRILIEREGIRAMSFAYIKERKFYVLGEFLRDVGL 6
           N+ IIYYS FGSL+EME AY  LK SR LI++EGIRA+SF Y+KERKF++LGEFLRDVGL
Sbjct: 188 NAFIIYYSRFGSLTEMETAYGRLKRSRHLIDKEGIRAVSFTYLKERKFFMLGEFLRDVGL 247

Query: 5   G 3
           G
Sbjct: 248 G 248


>ref|XP_008360488.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g42630-like [Malus domestica]
          Length = 415

 Score =  268 bits (684), Expect = 5e-69
 Identities = 137/242 (56%), Positives = 179/242 (73%), Gaps = 1/242 (0%)
 Frame = -2

Query: 734 TLNSKRFRVCFQKKDSPDRALARKIVWHWKRERGVVHRERHINCVSLIQTLSRKKLPRVA 555
           TL  KR  +   +  S +RALARK+V+ WKR+     +  +++CV +I++LSR+KLP VA
Sbjct: 86  TLAPKRQSIFCHQSHSQNRALARKVVFKWKRDECFNGQATYVDCVRIIRSLSRQKLPHVA 145

Query: 554 QELLLEMKSEGFVLDNSTLSALMLCYVDNGFFPEAQAIWDEILNSS-APNIQIISGLIDA 378
           QELLL MKS+G +  NST+SALML + +NG FP+A+A+W+E+L  S  P+IQ++S L D 
Sbjct: 146 QELLLXMKSDGLLPTNSTISALMLFHANNGLFPQAEAVWNEMLYISFVPSIQVVSQLFDV 205

Query: 377 YGRTGHFDKVIRILHQISSRDFNILPKIYALAISCFGKGGQLEMMENTLKEMVSRGFSID 198
           YG  G F+KV  IL Q+ +R  ++  ++Y+LAISCFGKGGQLE+ME  LKEM+S GF +D
Sbjct: 206 YGNAGCFEKVNEILGQMRARYLSLFSEVYSLAISCFGKGGQLELMEGALKEMISMGFPVD 265

Query: 197 SATGNSLIIYYSIFGSLSEMEAAYCSLKSSRILIEREGIRAMSFAYIKERKFYVLGEFLR 18
           SATGN+ I YYSIFGSL+EME AY  LK SR LIE EGI AMSFAY+K  KFY L EFL+
Sbjct: 266 SATGNAFIRYYSIFGSLTEMETAYGRLKRSRFLIEEEGIXAMSFAYLKRNKFYELAEFLK 325

Query: 17  DV 12
            V
Sbjct: 326 VV 327


>emb|CAN79718.1| hypothetical protein VITISV_012741 [Vitis vinifera]
          Length = 446

 Score =  263 bits (673), Expect = 9e-68
 Identities = 150/280 (53%), Positives = 177/280 (63%), Gaps = 30/280 (10%)
 Frame = -2

Query: 752 PLCVLKTLNSKRFRVCFQKKDSPDRALARK-----------------------------I 660
           PLC++ +  ++RFRV   +  SP+RALARK                             +
Sbjct: 42  PLCLIGSHKTQRFRVSLHQNYSPNRALARKAEEQDQGVSEVKDHEQLQKDFFLMDRLTEL 101

Query: 659 VWHWKRERGVVHRERHINCVSLIQTLSRKKLPRVAQELLLEMKSEGFVLDNSTLSALMLC 480
            WHWK+ER V  ++ +++   LIQ LSRK+LP VAQELL EMKSE               
Sbjct: 102 FWHWKQERSVDGKDNYVDYTPLIQALSRKRLPHVAQELLFEMKSE--------------- 146

Query: 479 YVDNGFFPEAQAIWDEILNSS-APNIQIISGLIDAYGRTGHFDKVIRILHQISSRDFNIL 303
             DNG FP+AQA+WDEI+NSS  PNIQI+S LIDAYG+ GHF +V RILHQ         
Sbjct: 147 --DNGLFPKAQALWDEIINSSFGPNIQIVSKLIDAYGKMGHFGEVTRILHQ--------- 195

Query: 302 PKIYALAISCFGKGGQLEMMENTLKEMVSRGFSIDSATGNSLIIYYSIFGSLSEMEAAYC 123
                        GGQLEMMEN LKEMVSRGF +DSATGN+ I YYSIFGSL+EMEAAY 
Sbjct: 196 -------------GGQLEMMENALKEMVSRGFPVDSATGNAFIRYYSIFGSLTEMEAAYD 242

Query: 122 SLKSSRILIEREGIRAMSFAYIKERKFYVLGEFLRDVGLG 3
            LK SRILIE EGIRAMSFAYIKE+K+Y LG+FLRDVGLG
Sbjct: 243 RLKKSRILIEEEGIRAMSFAYIKEKKYYRLGQFLRDVGLG 282


>ref|XP_006360648.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like isoform X1 [Solanum tuberosum]
           gi|565389826|ref|XP_006360649.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like isoform X2 [Solanum tuberosum]
          Length = 416

 Score =  254 bits (649), Expect = 5e-65
 Identities = 134/227 (59%), Positives = 166/227 (73%), Gaps = 1/227 (0%)
 Frame = -2

Query: 683 DRALARKIVWHWKRERGVVHRERHINCVSLIQTLSRKKLPRVAQELLLEMKSEGFVLDNS 504
           +++ A+K  W  K+   +  R  + +C SLIQ LSRKKLP  A+ L+LEMKSEGFV D+S
Sbjct: 25  NQSSAQKRRWRMKQGGNIDPRGNYADCASLIQGLSRKKLPVAAERLVLEMKSEGFVPDSS 84

Query: 503 TLSALMLCYVDNGFFPEAQAIWDEILNSS-APNIQIISGLIDAYGRTGHFDKVIRILHQI 327
           TLSALMLCY  NG F +A A WDEI+NSS  P++ +I+ LID Y   G+ D  +RILHQI
Sbjct: 85  TLSALMLCYASNGLFYKALAAWDEIMNSSFLPDVHVIAELIDIYVCKGYLDVAVRILHQI 144

Query: 326 SSRDFNILPKIYALAISCFGKGGQLEMMENTLKEMVSRGFSIDSATGNSLIIYYSIFGSL 147
             +D N+L  +YA AIS FGK GQLE+ME  LKEMVS GF +DS TGN+ +IYYS FG L
Sbjct: 145 QLKDSNLLRDVYAQAISRFGKKGQLELMEVMLKEMVSMGFPVDSTTGNAYVIYYSNFGML 204

Query: 146 SEMEAAYCSLKSSRILIEREGIRAMSFAYIKERKFYVLGEFLRDVGL 6
           SEME AY  LK SRILIE E IR++S AY+K+ KFY LG+F+RDVGL
Sbjct: 205 SEMEVAYGRLKMSRILIEEEAIRSISLAYLKKEKFYSLGQFVRDVGL 251


>ref|XP_008450656.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis melo]
           gi|659069565|ref|XP_008450664.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis melo]
           gi|659069567|ref|XP_008450673.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis melo]
          Length = 425

 Score =  251 bits (640), Expect = 6e-64
 Identities = 134/255 (52%), Positives = 186/255 (72%), Gaps = 1/255 (0%)
 Frame = -2

Query: 764 SVTRPLCVLKTLNSKRFRVCFQKKDSPDRALARKIVWHWKRERGVVHRERHINCVSLIQT 585
           +V  P C  +    +R  +  Q+  +  RA + KI +    E   V    +IN   +I+ 
Sbjct: 9   TVANPYCFPRNFKQERPMLSHQRHTAC-RASSCKI-FQQHNEGSSVDYGFNINNSQVIKK 66

Query: 584 LSRKKLPRVAQELLLEMKSEGFVLDNSTLSALMLCYVDNGFFPEAQAIWDEILNSS-APN 408
           LSR+++P +A+E+ LE+KSEGF L+NSTLS +M+ Y+D+G   +AQA+W+E+LNS   P+
Sbjct: 67  LSRRRMPTLAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEPS 126

Query: 407 IQIISGLIDAYGRTGHFDKVIRILHQISSRDFNILPKIYALAISCFGKGGQLEMMENTLK 228
           +Q+IS L +AYG+ GHFD + ++L Q+  R  ++LP+ Y+LAISCFGK  QLE+ME+TL+
Sbjct: 127 VQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTLR 186

Query: 227 EMVSRGFSIDSATGNSLIIYYSIFGSLSEMEAAYCSLKSSRILIEREGIRAMSFAYIKER 48
           EMVS GF+++SATGNS IIYYS+FGSL EME AY  LK SR LIE++GI AM+FAYI++R
Sbjct: 187 EMVSSGFTVNSATGNSFIIYYSMFGSLLEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKR 246

Query: 47  KFYVLGEFLRDVGLG 3
           KFY LGEFLRDVGLG
Sbjct: 247 KFYRLGEFLRDVGLG 261


>ref|XP_007014560.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508784923|gb|EOY32179.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 429

 Score =  251 bits (640), Expect = 6e-64
 Identities = 132/228 (57%), Positives = 172/228 (75%), Gaps = 6/228 (2%)
 Frame = -2

Query: 668 RKIVWHWKRERGV--VHRERHINCVSLIQTLSRKKLPR--VAQELLLEMKSEGFVLDNST 501
           R+I+  WKR+  +  V R+  ++  SL+QTL+ KK+P+  V   LLL+    G + +NST
Sbjct: 41  RQIIRLWKRDGSILGVGRDNFVDFDSLLQTLASKKMPQPHVVHHLLLQ----GLIPNNST 96

Query: 500 LSALMLCYVDNGFFPEAQAIWDEILNSSA--PNIQIISGLIDAYGRTGHFDKVIRILHQI 327
           LS +ML Y DNG FP+AQAIW+E+LN+++  P+IQ++S  +DAYG+ GHF KV +IL ++
Sbjct: 97  LSEIMLWYADNGLFPQAQAIWEEMLNTTSFTPSIQVVSKFMDAYGKMGHFHKVHKILDRV 156

Query: 326 SSRDFNILPKIYALAISCFGKGGQLEMMENTLKEMVSRGFSIDSATGNSLIIYYSIFGSL 147
                N+LP++Y +AISCFGK G+L++MENTLKEMVSRG  +DSATGN+ + YYSIFGSL
Sbjct: 157 ILLRVNLLPEVYPVAISCFGKHGRLDLMENTLKEMVSRGLPVDSATGNAFVRYYSIFGSL 216

Query: 146 SEMEAAYCSLKSSRILIEREGIRAMSFAYIKERKFYVLGEFLRDVGLG 3
           SEME AY  LK SR LIE EGIRAMS AYIKE KFY LGEFL D+GLG
Sbjct: 217 SEMEIAYARLKRSRHLIEEEGIRAMSSAYIKEGKFYRLGEFLNDLGLG 264


>ref|XP_004240282.2| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           [Solanum lycopersicum] gi|723702706|ref|XP_010321537.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630 [Solanum lycopersicum]
          Length = 406

 Score =  249 bits (637), Expect = 1e-63
 Identities = 130/207 (62%), Positives = 158/207 (76%), Gaps = 1/207 (0%)
 Frame = -2

Query: 623 RERHINCVSLIQTLSRKKLPRVAQELLLEMKSEGFVLDNSTLSALMLCYVDNGFFPEAQA 444
           R  + +C SLIQ LSRKKLP  A+ L+LEMKSEGFV D+STLSALMLCY  NG F +A A
Sbjct: 35  RINYRDCASLIQGLSRKKLPVAAERLVLEMKSEGFVPDSSTLSALMLCYATNGLFCKALA 94

Query: 443 IWDEILNSS-APNIQIISGLIDAYGRTGHFDKVIRILHQISSRDFNILPKIYALAISCFG 267
            WDEI+NSS  P++ +I+ LID YG  G+ D  +RILHQI  +D N+L  +YA AIS FG
Sbjct: 95  AWDEIMNSSFLPDVHVIAELIDIYGCKGYLDVAVRILHQIQLKDSNLLRDVYAQAISRFG 154

Query: 266 KGGQLEMMENTLKEMVSRGFSIDSATGNSLIIYYSIFGSLSEMEAAYCSLKSSRILIERE 87
           K GQLE+ME  L+EMVS GF +DS TGN+ +IYYS FG+LSEME AY  LK SRILIE E
Sbjct: 155 KKGQLELMEVMLEEMVSMGFPVDSTTGNAYVIYYSNFGTLSEMEVAYGRLKMSRILIEEE 214

Query: 86  GIRAMSFAYIKERKFYVLGEFLRDVGL 6
            IR++S AY+K+ KFY LG+F+RDVGL
Sbjct: 215 AIRSISLAYLKKEKFYSLGQFVRDVGL 241


>ref|XP_011648974.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis sativus]
          Length = 423

 Score =  248 bits (634), Expect = 3e-63
 Identities = 129/242 (53%), Positives = 176/242 (72%), Gaps = 26/242 (10%)
 Frame = -2

Query: 650 WKRERGVVHRERH-------------------------INCVSLIQTLSRKKLPRVAQEL 546
           +KRER ++  +RH                         IN   +I+ LSR+++P +A+E+
Sbjct: 18  FKRERSILSHQRHAACRASSCKIFQQHNEGSSVDDSFNINNSQVIKKLSRRRMPILAKEI 77

Query: 545 LLEMKSEGFVLDNSTLSALMLCYVDNGFFPEAQAIWDEILNSS-APNIQIISGLIDAYGR 369
            LE+KSEGF L+NSTLS +M+ Y+D+G   +AQA+W+E+LNS   P++Q+IS L +AYG+
Sbjct: 78  FLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEPSVQVISKLFNAYGK 137

Query: 368 TGHFDKVIRILHQISSRDFNILPKIYALAISCFGKGGQLEMMENTLKEMVSRGFSIDSAT 189
            GHFD + ++L Q+  R  ++LP+ Y+LAISCFGK  QLE+ME+TL+EMVS GF+++SAT
Sbjct: 138 MGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTLREMVSSGFTVNSAT 197

Query: 188 GNSLIIYYSIFGSLSEMEAAYCSLKSSRILIEREGIRAMSFAYIKERKFYVLGEFLRDVG 9
           GNS IIYYS+FGSL EME AY  LK SR LIE++GI AM+FAYI++RKFY LGEFLRDVG
Sbjct: 198 GNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRLGEFLRDVG 257

Query: 8   LG 3
           LG
Sbjct: 258 LG 259