BLASTX nr result
ID: Cornus23_contig00008594
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00008594
(536 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012757142.1| hypothetical protein SAMD00019534_023900 [Ac... 75 2e-11
ref|XP_012757468.1| hypothetical protein SAMD00019534_027160 [Ac... 71 4e-10
gb|EFA78221.1| hypothetical protein PPL_08871 [Polysphondylium p... 71 4e-10
ref|WP_045007880.1| choline dehydrogenase [Bradyrhizobium sp. LT... 68 3e-09
ref|WP_043861178.1| choline dehydrogenase [Pseudomonas putida] 67 4e-09
gb|KIU52551.1| choline dehydrogenase [Pseudomonas putida] 67 4e-09
ref|WP_027549362.1| choline dehydrogenase [Bradyrhizobium sp. WS... 67 5e-09
ref|WP_028134779.1| choline dehydrogenase [Bradyrhizobium japoni... 67 7e-09
ref|WP_045010638.1| choline dehydrogenase [Bradyrhizobium sp. LT... 66 9e-09
ref|WP_036035330.1| choline dehydrogenase [Bradyrhizobium yuanmi... 66 9e-09
ref|WP_036024751.1| choline dehydrogenase [Bradyrhizobium yuanmi... 66 9e-09
ref|WP_036013910.1| choline dehydrogenase [Bradyrhizobium yuanmi... 66 9e-09
ref|XP_004360934.1| choline dehydrogenase [Dictyostelium fascicu... 66 9e-09
ref|WP_057195918.1| choline dehydrogenase [Bradyrhizobium sp. Le... 66 1e-08
ref|WP_038972584.1| choline dehydrogenase [Bradyrhizobium sp. CC... 66 1e-08
ref|WP_038956505.1| choline dehydrogenase [Bradyrhizobium japoni... 66 1e-08
ref|WP_029354833.1| choline dehydrogenase [Bosea sp. 117] 66 1e-08
ref|WP_028179729.1| choline dehydrogenase [Bradyrhizobium japoni... 66 1e-08
ref|WP_028141778.1| MULTISPECIES: choline dehydrogenase [Bradyrh... 66 1e-08
ref|WP_024341393.1| choline dehydrogenase [Bradyrhizobium japoni... 66 1e-08
>ref|XP_012757142.1| hypothetical protein SAMD00019534_023900 [Acytostelium subglobosum
LB1] gi|735857774|dbj|GAM19215.1| hypothetical protein
SAMD00019534_023900 [Acytostelium subglobosum LB1]
Length = 601
Score = 75.1 bits (183), Expect = 2e-11
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Frame = -2
Query: 532 SSAGLGGDDYVATEFKKDPATGKVFRSGYFTRVDVPIYTPSLLDPAVELEYNWNTTNTGG 353
S+ +GG D V T+ P+ S FT+ DVP+Y + ++ W+ T G
Sbjct: 47 STVEVGGKDVVGTQGTLSPSNTYTPVST-FTKYDVPLYWSAAYITGLK----WDIT---G 98
Query: 352 ASIGRTLGGSQAHNGMNWAKPTTYDIQRWNITGWAPSQFFPFIARAENYTGSGFVLNSYS 173
AS+ + GG HNGM + + D W +TGW S FP+ + E ++
Sbjct: 99 ASVAKVTGGCGMHNGMVFQRGLESDYNNWGVTGWNWSSMFPYFLKIETILDPSLSTSTLH 158
Query: 172 GLTGPLQIRKTAVITPLDQ---TFVNASIAAGIPFNP 71
G +GP+ + P DQ F+++ AAG+PFNP
Sbjct: 159 GHSGPINVG----THPFDQEGNDFISSCSAAGLPFNP 191
>ref|XP_012757468.1| hypothetical protein SAMD00019534_027160 [Acytostelium subglobosum
LB1] gi|735858100|dbj|GAM19541.1| hypothetical protein
SAMD00019534_027160 [Acytostelium subglobosum LB1]
Length = 566
Score = 70.9 bits (172), Expect = 4e-10
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Frame = -2
Query: 532 SSAGLGGDDYVATEFKKDPATGKVFRSGYFTRVDVPIYTPS--LLDPAVELEYNWNTTNT 359
SS LG D VAT+ A G + +T+ +VP+Y S L P NW+
Sbjct: 48 SSFALGNRDVVATQGNMG-ANGAYTPTSVYTKYEVPLYWSSSYLTGP------NWDIA-- 98
Query: 358 GGASIGRTLGGSQAHNGMNWAKPTTYDIQRWNITGWAPSQFFPFIARAENYTGSGFVLNS 179
GA + + GG HNGM + + T+ D WN+ GW + P+ ++E ++
Sbjct: 99 -GAGVAKVTGGCGNHNGMVFNRGTSTDYDGWNVNGWNAASMLPYFIKSETILDPPLAAST 157
Query: 178 YSGLTGPLQIRKTAVITPLDQTFVNASIAAGIPFN 74
G +GP+ + T F+++ AAG+PFN
Sbjct: 158 LHGHSGPINV-GTHPFDSEGADFISSCNAAGLPFN 191
>gb|EFA78221.1| hypothetical protein PPL_08871 [Polysphondylium pallidum PN500]
Length = 612
Score = 70.9 bits (172), Expect = 4e-10
Identities = 39/124 (31%), Positives = 60/124 (48%)
Frame = -2
Query: 445 FTRVDVPIYTPSLLDPAVELEYNWNTTNTGGASIGRTLGGSQAHNGMNWAKPTTYDIQRW 266
FT+ D+P+Y S+ + NW+ GA + + GG HNGM + + D W
Sbjct: 84 FTKYDIPLYWSSVYLTGL----NWDIP---GAGVAKVTGGCGMHNGMVFQRGQQADYDGW 136
Query: 265 NITGWAPSQFFPFIARAENYTGSGFVLNSYSGLTGPLQIRKTAVITPLDQTFVNASIAAG 86
N+ GW S FP+ R E ++ G +GP+++ KT F+ AS +AG
Sbjct: 137 NVGGWNWSSLFPYFLRIETILDPALSASTNHGHSGPIKV-KTIPFDQEGNDFIQASASAG 195
Query: 85 IPFN 74
+PFN
Sbjct: 196 LPFN 199
>ref|WP_045007880.1| choline dehydrogenase [Bradyrhizobium sp. LTSP857]
gi|763875285|gb|KJC36515.1| choline dehydrogenase
[Bradyrhizobium sp. LTSP857]
Length = 541
Score = 67.8 bits (164), Expect = 3e-09
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = -2
Query: 343 GRTLGGSQAHNGMNWAKPTTYDIQRWNI---TGWAPSQFFPFIARAENYTGSGFVLNSYS 173
G+TLGGS + NG+ + + D RW TGW P+ +AEN T + Y
Sbjct: 91 GKTLGGSSSINGLLYVRGQHEDYDRWRQHGNTGWGYDDVLPYFKKAENQTRGA---DQYH 147
Query: 172 GLTGPLQIRKTAVITPLDQTFVNASIAAGIPFNP 71
G GPL + + PL + F++A++A G+P+NP
Sbjct: 148 GTGGPLPVSNMVMTDPLSKAFIDAAVANGLPYNP 181
>ref|WP_043861178.1| choline dehydrogenase [Pseudomonas putida]
Length = 551
Score = 67.4 bits (163), Expect = 4e-09
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = -2
Query: 343 GRTLGGSQAHNGMNWAKPTTYDIQRW---NITGWAPSQFFPFIARAENYTGSGFVLNSYS 173
GR LGGS + NGMNW + +D W + GW+ + P+ +AE + G N Y
Sbjct: 90 GRVLGGSSSINGMNWVRGNPWDYDNWGAMGLHGWSYEECLPYFRKAETFDQGG---NDYR 146
Query: 172 GLTGPLQIRKTAVITPLDQTFVNASIAAGIPF 77
G GP+ I PL + F+ A + AG P+
Sbjct: 147 GDAGPMHIETCKADNPLYRAFIEAGVQAGYPY 178
>gb|KIU52551.1| choline dehydrogenase [Pseudomonas putida]
Length = 548
Score = 67.4 bits (163), Expect = 4e-09
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = -2
Query: 343 GRTLGGSQAHNGMNWAKPTTYDIQRW---NITGWAPSQFFPFIARAENYTGSGFVLNSYS 173
GR LGGS + NGMNW + +D W + GW+ + P+ +AE + G N Y
Sbjct: 87 GRVLGGSSSINGMNWVRGNPWDYDNWGAMGLHGWSYEECLPYFRKAETFDQGG---NDYR 143
Query: 172 GLTGPLQIRKTAVITPLDQTFVNASIAAGIPF 77
G GP+ I PL + F+ A + AG P+
Sbjct: 144 GDAGPMHIETCKADNPLYRAFIEAGVQAGYPY 175
>ref|WP_027549362.1| choline dehydrogenase [Bradyrhizobium sp. WSM2254]
Length = 541
Score = 67.0 bits (162), Expect = 5e-09
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = -2
Query: 343 GRTLGGSQAHNGMNWAKPTTYDIQRWNI---TGWAPSQFFPFIARAENYTGSGFVLNSYS 173
G+TLGGS + NG+ + + D RW TGW P+ +AEN + + Y
Sbjct: 91 GKTLGGSSSINGLLYVRGQHEDYDRWRQLGNTGWGYDDVLPYFKKAENQSRGA---DQYH 147
Query: 172 GLTGPLQIRKTAVITPLDQTFVNASIAAGIPFNP 71
G GPL + V PL + F++A++ AG+P+NP
Sbjct: 148 GSGGPLPVSNMIVTDPLSKAFIDAAVEAGLPYNP 181
>ref|WP_028134779.1| choline dehydrogenase [Bradyrhizobium japonicum]
Length = 541
Score = 66.6 bits (161), Expect = 7e-09
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = -2
Query: 343 GRTLGGSQAHNGMNWAKPTTYDIQRWNI---TGWAPSQFFPFIARAENYTGSGFVLNSYS 173
G+TLGGS + NG+ + + D RW TGW P+ +AEN + + Y
Sbjct: 91 GKTLGGSSSINGLLYVRGQHEDYDRWRQLGNTGWGYDDVLPYFKKAENQSRGA---DQYH 147
Query: 172 GLTGPLQIRKTAVITPLDQTFVNASIAAGIPFNP 71
G GPL + V PL + F++A++ +G+P+NP
Sbjct: 148 GTGGPLPVSNMVVTDPLSKAFIDAAVESGLPYNP 181
>ref|WP_045010638.1| choline dehydrogenase [Bradyrhizobium sp. LTSP849]
gi|763892439|gb|KJC53252.1| choline dehydrogenase
[Bradyrhizobium sp. LTSP849]
Length = 541
Score = 66.2 bits (160), Expect = 9e-09
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = -2
Query: 343 GRTLGGSQAHNGMNWAKPTTYDIQRWNI---TGWAPSQFFPFIARAENYTGSGFVLNSYS 173
G+TLGGS + NG+ + + D RW TGW P+ +AEN + + Y
Sbjct: 91 GKTLGGSSSINGLLYVRGQHEDYDRWRQHGNTGWGYDDVLPYFKKAENQSRGA---DQYH 147
Query: 172 GLTGPLQIRKTAVITPLDQTFVNASIAAGIPFNP 71
G GPL + + PL + F++A++A G+P+NP
Sbjct: 148 GTGGPLPVSNMVMTDPLSKAFIDAAVANGLPYNP 181
>ref|WP_036035330.1| choline dehydrogenase [Bradyrhizobium yuanmingense]
Length = 541
Score = 66.2 bits (160), Expect = 9e-09
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = -2
Query: 343 GRTLGGSQAHNGMNWAKPTTYDIQRWNI---TGWAPSQFFPFIARAENYTGSGFVLNSYS 173
G+TLGGS + NG+ + + D RW TGW P+ +AEN + + Y
Sbjct: 91 GKTLGGSSSINGLLYVRGQHEDYDRWRQLGNTGWGYDDVLPYFKKAENQSRGA---DQYH 147
Query: 172 GLTGPLQIRKTAVITPLDQTFVNASIAAGIPFNP 71
G GPL + V PL + F++A++ +G+P+NP
Sbjct: 148 GTGGPLPVSNMIVTDPLSKAFIDAAVESGLPYNP 181
>ref|WP_036024751.1| choline dehydrogenase [Bradyrhizobium yuanmingense]
Length = 541
Score = 66.2 bits (160), Expect = 9e-09
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = -2
Query: 343 GRTLGGSQAHNGMNWAKPTTYDIQRWNI---TGWAPSQFFPFIARAENYTGSGFVLNSYS 173
G+TLGGS + NG+ + + D RW TGW P+ +AEN + + Y
Sbjct: 91 GKTLGGSSSINGLLYVRGQHEDYDRWRQLGNTGWGYDDVLPYFKKAENQSRGA---DQYH 147
Query: 172 GLTGPLQIRKTAVITPLDQTFVNASIAAGIPFNP 71
G GPL + V PL + F++A++ +G+P+NP
Sbjct: 148 GTGGPLPVSNMIVTDPLSKAFIDAAVESGLPYNP 181
>ref|WP_036013910.1| choline dehydrogenase [Bradyrhizobium yuanmingense]
Length = 541
Score = 66.2 bits (160), Expect = 9e-09
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = -2
Query: 343 GRTLGGSQAHNGMNWAKPTTYDIQRWNI---TGWAPSQFFPFIARAENYTGSGFVLNSYS 173
G+TLGGS + NG+ + + D RW TGW P+ +AEN + + Y
Sbjct: 91 GKTLGGSSSINGLLYVRGQHEDYDRWRQLGNTGWGYDDVLPYFKKAENQSRGA---DQYH 147
Query: 172 GLTGPLQIRKTAVITPLDQTFVNASIAAGIPFNP 71
G GPL + V PL + F++A++ +G+P+NP
Sbjct: 148 GTGGPLPVSNMIVTDPLSKAFIDAAVESGLPYNP 181
>ref|XP_004360934.1| choline dehydrogenase [Dictyostelium fasciculatum]
gi|328874718|gb|EGG23083.1| choline dehydrogenase
[Dictyostelium fasciculatum]
Length = 606
Score = 66.2 bits (160), Expect = 9e-09
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Frame = -2
Query: 535 RSSAGLGGDDYVATEFKKDPATGKVFRSGYFTRVDVPIY--TPSLLDPAVELEYNWNTTN 362
+S AGLGG+DYV T +P + + T DVP+Y S+ P +++
Sbjct: 81 KSIAGLGGEDYVGTRGTLNPKNNEYTANRPVTAFDVPLYWQKASITGPRWDIQ------- 133
Query: 361 TGGASIGRTLGGSQAHNGMNWAKPTTYDIQRWNITGWAPSQFFPFIARAENYTGSGFVLN 182
GA + + +GG HNGM + + T D W + GW + P+ + S V +
Sbjct: 134 --GAQVAKMIGGCGVHNGMVFQRGKTDDYDDWGVPGWNWTTMEPYFKKVYTIMDSHLVSS 191
Query: 181 SYSGLTGPLQIRKTAVITPLDQ---TFVNASIAAGIPFN 74
+ G G +++ P DQ F+ + ++G+P+N
Sbjct: 192 NKHGHQGKIKVG----TRPFDQEGRNFLLSCNSSGLPYN 226
>ref|WP_057195918.1| choline dehydrogenase [Bradyrhizobium sp. Leaf396]
gi|945269068|gb|KQT26932.1| choline dehydrogenase
[Bradyrhizobium sp. Leaf396]
Length = 541
Score = 65.9 bits (159), Expect = 1e-08
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = -2
Query: 343 GRTLGGSQAHNGMNWAKPTTYDIQRWNI---TGWAPSQFFPFIARAENYTGSGFVLNSYS 173
G+TLGGS + NG+ + + D RW TGW P+ +AEN + + Y
Sbjct: 91 GKTLGGSSSINGLLYVRGQHEDYDRWRQLGNTGWGYDDVLPYFKKAENQSRGA---DQYH 147
Query: 172 GLTGPLQIRKTAVITPLDQTFVNASIAAGIPFNP 71
G GPL + V PL + F++A++ G+P+NP
Sbjct: 148 GTGGPLPVSNMIVTDPLSKAFIDAAVETGLPYNP 181
>ref|WP_038972584.1| choline dehydrogenase [Bradyrhizobium sp. CCBAU 15635]
Length = 541
Score = 65.9 bits (159), Expect = 1e-08
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = -2
Query: 343 GRTLGGSQAHNGMNWAKPTTYDIQRWNI---TGWAPSQFFPFIARAENYTGSGFVLNSYS 173
G+TLGGS + NG+ + + D RW TGW P+ +AEN + + Y
Sbjct: 91 GKTLGGSSSINGLLYVRGQHEDYDRWRQLGNTGWGYDDVLPYFKKAENQSRGA---DQYH 147
Query: 172 GLTGPLQIRKTAVITPLDQTFVNASIAAGIPFNP 71
G GPL + V PL + F++A++ G+P+NP
Sbjct: 148 GSGGPLPVSNMVVTDPLSKAFIDAAVETGLPYNP 181
>ref|WP_038956505.1| choline dehydrogenase [Bradyrhizobium japonicum]
Length = 541
Score = 65.9 bits (159), Expect = 1e-08
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = -2
Query: 343 GRTLGGSQAHNGMNWAKPTTYDIQRWNI---TGWAPSQFFPFIARAENYTGSGFVLNSYS 173
G+TLGGS + NG+ + + D RW GWA P+ +AEN T + Y
Sbjct: 91 GKTLGGSSSINGLLYVRGQHEDYDRWRQHGNAGWAYDDVLPYFKKAENQTRGA---DQYH 147
Query: 172 GLTGPLQIRKTAVITPLDQTFVNASIAAGIPFNP 71
G GPL + V PL + F++A++ G+P+NP
Sbjct: 148 GSGGPLPVSNMVVTDPLSKAFMDAAVEIGLPYNP 181
>ref|WP_029354833.1| choline dehydrogenase [Bosea sp. 117]
Length = 554
Score = 65.9 bits (159), Expect = 1e-08
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Frame = -2
Query: 349 SIGRTLGGSQAHNGMNWAKPTTYDIQRW---NITGWAPSQFFPFIARAENYTGSGFVLNS 179
S GR LGGS + NGMNW + D W + GW+ + P+ +AE + G ++
Sbjct: 88 SRGRVLGGSSSINGMNWVRGNPADYDGWEARGLPGWSYAHVLPYFRKAETFASGG---DT 144
Query: 178 YSGLTGPLQIRKTAVITPLDQTFVNASIAAG 86
Y G TGP++I + PL + F+ A + AG
Sbjct: 145 YRGATGPMRIERCEAKNPLYRAFLEAGVQAG 175
>ref|WP_028179729.1| choline dehydrogenase [Bradyrhizobium japonicum]
Length = 541
Score = 65.9 bits (159), Expect = 1e-08
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = -2
Query: 343 GRTLGGSQAHNGMNWAKPTTYDIQRWNI---TGWAPSQFFPFIARAENYTGSGFVLNSYS 173
G+TLGGS + NG+ + + D RW TGW P+ +AEN + + Y
Sbjct: 91 GKTLGGSSSINGLLYVRGQHEDYDRWRQLGNTGWGYDDVLPYFKKAENQSRGA---DQYH 147
Query: 172 GLTGPLQIRKTAVITPLDQTFVNASIAAGIPFNP 71
G GPL + V PL + F++A++ G+P+NP
Sbjct: 148 GTGGPLPVSNMIVTDPLSKAFIDAAVETGLPYNP 181
>ref|WP_028141778.1| MULTISPECIES: choline dehydrogenase [Bradyrhizobium]
Length = 541
Score = 65.9 bits (159), Expect = 1e-08
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = -2
Query: 343 GRTLGGSQAHNGMNWAKPTTYDIQRWNI---TGWAPSQFFPFIARAENYTGSGFVLNSYS 173
G+TLGGS + NG+ + + D RW TGW P+ +AEN + + Y
Sbjct: 91 GKTLGGSSSINGLLYVRGQHEDYDRWRQLGNTGWGYDDVLPYFKKAENQSRGA---DQYH 147
Query: 172 GLTGPLQIRKTAVITPLDQTFVNASIAAGIPFNP 71
G GPL + V PL + F++A++ G+P+NP
Sbjct: 148 GSGGPLPVSNMVVTDPLSKAFIDAAVETGLPYNP 181
>ref|WP_024341393.1| choline dehydrogenase [Bradyrhizobium japonicum]
Length = 541
Score = 65.9 bits (159), Expect = 1e-08
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = -2
Query: 343 GRTLGGSQAHNGMNWAKPTTYDIQRWNI---TGWAPSQFFPFIARAENYTGSGFVLNSYS 173
G+TLGGS + NG+ + + D RW TGW P+ +AEN + + Y
Sbjct: 91 GKTLGGSSSINGLLYVRGQHEDYDRWRQLGNTGWGYDDVLPYFKKAENQSRGA---DQYH 147
Query: 172 GLTGPLQIRKTAVITPLDQTFVNASIAAGIPFNP 71
G GPL + V PL + F++A++ G+P+NP
Sbjct: 148 GTGGPLPVSNMIVTDPLSKAFIDAAVETGLPYNP 181