BLASTX nr result

ID: Cornus23_contig00008386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00008386
         (537 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010688587.1| PREDICTED: uncharacterized protein LOC104902...    44   2e-06
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    42   6e-06

>ref|XP_010688587.1| PREDICTED: uncharacterized protein LOC104902499 [Beta vulgaris
           subsp. vulgaris]
          Length = 407

 Score = 43.5 bits (101), Expect(2) = 2e-06
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = -3

Query: 409 SGDERLLAKLWQYQSQKKYLHFMWSCCQGRIPVLMNLKRKGLAMDDSSKRCGRG--PVEH 236
           S  E +  K+W+  +  K  HF+W      +PV   L R+G+  D + +RCG G   V H
Sbjct: 137 SSSEGMWKKVWKSCTPPKVRHFVWRALHNTLPVGEALMRRGMECDPTCERCGEGKEDVGH 196

Query: 235 MFMEMP 218
           + +  P
Sbjct: 197 LLLTCP 202



 Score = 35.0 bits (79), Expect(2) = 2e-06
 Identities = 22/72 (30%), Positives = 34/72 (47%)
 Frame = -1

Query: 231 LWKCPVVVKS*RLSPLRLYFSNSTRHSWLRWFKSVVQTSQNSEAKTDFLSLIAY*CWNLW 52
           L  CP+  +    SPLRL   +  R S+  W   ++   ++ E    F +L    CW++W
Sbjct: 198 LLTCPMSKRIWYASPLRLKIEDDYRGSFKGWVDCLLGQIKDQEWWEAFWAL----CWSIW 253

Query: 51  KGRIM*VFD*ER 16
            GR   +FD  R
Sbjct: 254 LGRNEWIFDKRR 265


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 42.4 bits (98), Expect(2) = 6e-06
 Identities = 21/74 (28%), Positives = 42/74 (56%)
 Frame = -1

Query: 231  LWKCPVVVKS*RLSPLRLYFSNSTRHSWLRWFKSVVQTSQNSEAKTDFLSLIAY*CWNLW 52
            +W C    ++  +SPLR++  N    S+  W +S++ T ++    T++ +L    CWN+W
Sbjct: 1106 IWGCDESSRAWYISPLRIHTGNIEAGSFRIWVESLLDTHKD----TEWWALFWMICWNIW 1161

Query: 51   KGRIM*VFD*ERVS 10
             GR   VF+ ++++
Sbjct: 1162 LGRNKWVFEKKKLA 1175



 Score = 34.3 bits (77), Expect(2) = 6e-06
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = -3

Query: 397  RLLAKLWQYQSQKKYLHFMWSCCQGRIPVLMNLKRKGLAMDDSSKRCG 254
            +L  K+W+ +   K   F W      + V  N++++G+ +D +  RCG
Sbjct: 1049 KLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCG 1096


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