BLASTX nr result
ID: Cornus23_contig00008203
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cornus23_contig00008203 (2648 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 667 0.0 ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III s... 631 0.0 ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III s... 637 0.0 ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III s... 640 0.0 ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III s... 632 0.0 ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 635 0.0 ref|XP_010033188.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 609 0.0 gb|KCW52757.1| hypothetical protein EUGRSUZ_J02108 [Eucalyptus g... 609 0.0 ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 633 0.0 ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 614 0.0 ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 615 0.0 gb|KDO73040.1| hypothetical protein CISIN_1g000828mg [Citrus sin... 612 0.0 ref|XP_008222562.1| PREDICTED: DNA-directed RNA polymerase III s... 603 0.0 ref|XP_012064930.1| PREDICTED: DNA-directed RNA polymerase III s... 588 0.0 ref|XP_012471450.1| PREDICTED: DNA-directed RNA polymerase III s... 600 0.0 ref|XP_012471451.1| PREDICTED: DNA-directed RNA polymerase III s... 600 0.0 gb|KDP44150.1| hypothetical protein JCGZ_05617 [Jatropha curcas] 588 0.0 ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 600 0.0 ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 600 0.0 ref|XP_010092991.1| DNA-directed RNA polymerase III subunit RPC1... 619 0.0 >ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Vitis vinifera] Length = 1383 Score = 667 bits (1722), Expect(2) = 0.0 Identities = 362/519 (69%), Positives = 413/519 (79%), Gaps = 1/519 (0%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 L+KALEDLS+ YD TVRNA+G IVQF+YGDDGMDP++MEGKDG PLNFNRLF KVKATCP Sbjct: 872 LMKALEDLSIQYDETVRNANGSIVQFLYGDDGMDPARMEGKDGFPLNFNRLFLKVKATCP 931 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGGCSMAFKDSIENFLEKCIQRFESTRRALKMD 1473 AG++AS+ +I V KRL EH+ TS GCS AFK ++ FLE+C ++F++TR AL + Sbjct: 932 AGENASLSALQIEETV-KRLKEHN-TSAEGCSDAFKTNLSGFLEECKEKFKNTREALGLH 989 Query: 1472 EDQSVNGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXXXXXXXXGEP 1293 + E A+ ISG+TS+QL+VFL+TCISRY LKR GEP Sbjct: 990 GEHVGEENLDIQEKFAKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEP 1049 Query: 1292 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKPKTATMVKGR 1113 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITA LEC++ KTA MVKGR Sbjct: 1050 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGR 1109 Query: 1112 IEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILRTPKIKLKEQ 933 IE+T LGQVAKSIKIVLT+RLA I V LDME IQASQLSID++ V+ESILR +IKLK+Q Sbjct: 1110 IERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQ 1169 Query: 932 HVKVLDVRKLEVIPQTDKNRLHFELHSLKNKLPTVVVKGINTVERAVINXXXXXXXXXXX 753 H+KVLD KLEV PQ D++ +HFELH+LKN LPTVVVKGI TVERAVIN Sbjct: 1170 HIKVLDAGKLEVHPQGDRSTIHFELHALKNLLPTVVVKGIETVERAVIN------KDNKV 1223 Query: 752 XYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXXXXXIQYTMKSHGMT 573 YNLLVEGTGL+ VMGTEGV G +TTSNHI+EVQQTLG IQYTM SHGM+ Sbjct: 1224 KYNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMS 1283 Query: 572 IDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADHLFNASVNGRDDKIE 393 ID+RHMMLLADLMTF+GEVLGITRFGIQKM SVLMLASFEKTADHLFNASV+GRDDKIE Sbjct: 1284 IDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIE 1343 Query: 392 GVSECIIMGIPMQIGTGILKVRQRVPPV-QLSKGLEPLI 279 GVSECIIMGIPMQ+GTGILKVRQR+ V +LS GL+P+I Sbjct: 1344 GVSECIIMGIPMQLGTGILKVRQRLQQVPELSYGLDPII 1382 Score = 484 bits (1246), Expect(2) = 0.0 Identities = 234/271 (86%), Positives = 251/271 (92%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNKSGDPETMCPNDGFVYFRNSELVSGQLG 2468 LWTGKQLF+VLLRPHA++RVYLNLTV EKTYNK ETMCP+DGFVYFRNSEL+SGQLG Sbjct: 589 LWTGKQLFNVLLRPHANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLG 648 Query: 2467 KATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNNGFSIGIDDVQPGESLND 2288 KATLGNGNKDGL+SVLLRDYN+HAAA CMNRLAKLSARWIGN+GFSIGIDDVQPG LND Sbjct: 649 KATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLND 708 Query: 2287 SKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRETAANVCMKEL 2108 K RI EGY C ELI+ YN+G+L LQPGC+AAQTLEAEITGVLN IRET ANVCM+EL Sbjct: 709 QKSKRIEEGYENCHELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEEL 768 Query: 2107 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAK 1928 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDR+LPHFPRKSKTP AK Sbjct: 769 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAK 828 Query: 1927 GFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 GFVA+SFY+GLTATEFFFHTMGGREGLVDTA Sbjct: 829 GFVASSFYTGLTATEFFFHTMGGREGLVDTA 859 >ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nelumbo nucifera] Length = 1392 Score = 631 bits (1628), Expect(2) = 0.0 Identities = 345/522 (66%), Positives = 402/522 (77%), Gaps = 4/522 (0%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 LIKALEDL+V+YD+TVRNASG +VQF+YGDDG+DP+ MEGK G+PLN R++ K KATCP Sbjct: 879 LIKALEDLAVYYDDTVRNASGGVVQFLYGDDGLDPANMEGKKGIPLNLERVYLKTKATCP 938 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGGCSMAFKDSIENFLEKCIQRFESTRRALKMD 1473 +G +AS+ PSEI + R+S +DMT DGGCS AFK + +F++ I +TR+AL +D Sbjct: 939 SGTNASLCPSEIVKILDDRISRYDMTPDGGCSSAFKKLLVDFIQNRISILRNTRKALGLD 998 Query: 1472 EDQSVNGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXXXXXXXXGEP 1293 E+ + + LE+IA ISG+T+QQLKVFLETCISRYHLKR GEP Sbjct: 999 EEYAKKDNSDILEHIAANISGITTQQLKVFLETCISRYHLKRIEAGAAIGAIGAQSIGEP 1058 Query: 1292 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKPKTATMVKGR 1113 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAK ISTPIITATLECDD K+A +VKG Sbjct: 1059 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECDDNVKSARIVKGC 1118 Query: 1112 IEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILR--TPKIKLK 939 IEKT+LG+VAKSIKIV+T R ASIV++LDM RI+A+QL I A +VKESIL+ PK K K Sbjct: 1119 IEKTVLGEVAKSIKIVMTQRQASIVISLDMARIEAAQLKISADSVKESILKHLNPKFKPK 1178 Query: 938 EQHVKVLDVRKLEVIP-QTDKNRLHFELHSLKNKLPTVVVKGINTVERAVINXXXXXXXX 762 + V KL VIP ++D+++LHFELH+LK LP V+VKGI+TV+RAVIN Sbjct: 1179 ---IVVDKGYKLIVIPTESDRSKLHFELHNLKAVLPQVIVKGISTVQRAVINKSKDGKY- 1234 Query: 761 XXXXYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXXXXXIQYTMKSH 582 NLLVEGT L VMGT GVDGCKTTSNHI+EVQ TLG IQYTM H Sbjct: 1235 -----NLLVEGTNLLGVMGTPGVDGCKTTSNHIIEVQGTLGIEAARRCIIDEIQYTMGKH 1289 Query: 581 GMTIDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADHLFNASVNGRDD 402 GM ID+RHMMLLADLMT+KGEVLGITR GIQKMK+SVLMLASFEKTADHLFNASVNGRDD Sbjct: 1290 GMDIDIRHMMLLADLMTYKGEVLGITRTGIQKMKESVLMLASFEKTADHLFNASVNGRDD 1349 Query: 401 KIEGVSECIIMGIPMQIGTGILKVRQRVPPV-QLSKGLEPLI 279 KIEGVSECII+GIPMQIGTGILKV QR P V QLS +P+I Sbjct: 1350 KIEGVSECIILGIPMQIGTGILKVIQRYPQVPQLSYKPDPII 1391 Score = 468 bits (1203), Expect(2) = 0.0 Identities = 229/271 (84%), Positives = 244/271 (90%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNKSGDPETMCPNDGFVYFRNSELVSGQLG 2468 LWTGKQLFSVL+RPHA MRVYLNLTV EK K ETMCPNDGFVYFRNSEL+ GQLG Sbjct: 598 LWTGKQLFSVLVRPHAHMRVYLNLTVLEKNCVKQ--KETMCPNDGFVYFRNSELICGQLG 655 Query: 2467 KATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNNGFSIGIDDVQPGESLND 2288 KATLGNGNKDGL+SVLLRDYN+HAAA+CMNR+AKLSARWIGN+GFSIGIDDVQPGE L D Sbjct: 656 KATLGNGNKDGLFSVLLRDYNAHAAASCMNRIAKLSARWIGNHGFSIGIDDVQPGELLKD 715 Query: 2287 SKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRETAANVCMKEL 2108 K+ I +GY CDELI +YN+G L L+PGCDAAQTLEA+IT LN IRE A VCM+EL Sbjct: 716 KKKETIEDGYKACDELIHSYNKGNLELEPGCDAAQTLEAQITRKLNEIREETAAVCMQEL 775 Query: 2107 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAK 1928 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAK Sbjct: 776 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAK 835 Query: 1927 GFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 GFVANSFY+GLTATEFFFHTMGGREGLVDTA Sbjct: 836 GFVANSFYTGLTATEFFFHTMGGREGLVDTA 866 >ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nicotiana sylvestris] gi|698510366|ref|XP_009800354.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nicotiana sylvestris] Length = 1390 Score = 637 bits (1643), Expect(2) = 0.0 Identities = 345/522 (66%), Positives = 396/522 (75%), Gaps = 4/522 (0%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 L+KALEDL+V+YDNTVRNAS I+QF+YGDDGMDPSQME K G PLNF+RLF KVKATCP Sbjct: 868 LMKALEDLAVYYDNTVRNASASIIQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCP 927 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGGCSMAFKDSIENFLEKCI-QRFESTRRALKM 1476 + SEI V +RLS HDM+ +GGCS AF+ S+ +FL K + + + R AL + Sbjct: 928 PRGEKGLSYSEICEIVNERLSYHDMSPEGGCSEAFRASLSDFLIKNLAETLKRLREALLL 987 Query: 1475 DEDQSVNGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXXXXXXXXGE 1296 E+Q G ++LEN+A ISG+T +QL+VFL CISRYHLKR GE Sbjct: 988 GEEQYAGGDREYLENVALNISGITKKQLQVFLNMCISRYHLKRLESGTAIGAIGAQSIGE 1047 Query: 1295 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKPKTATMVKG 1116 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK+I+TPIITA L A M+K Sbjct: 1048 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKINTPIITAKLLSAANLTAARMIKA 1107 Query: 1115 RIEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILRTPKIKLKE 936 RIEKT+LGQVAKS+KIV+ +RLASI +TLDME IQ SQL IDA+TVK+SIL+TPKIKLKE Sbjct: 1108 RIEKTLLGQVAKSVKIVMASRLASIAITLDMETIQVSQLCIDAYTVKQSILQTPKIKLKE 1167 Query: 935 QHVKVLDVRKLEVIPQTDKNRLHFELHSLKNKLPTVVVKGINTVERAVIN---XXXXXXX 765 Q VKVL+ RKLEV PQ +K++LHFELH LKNKLP VVVKGI TV+RAV+N Sbjct: 1168 QQVKVLNPRKLEVFPQANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQERDRKSD 1227 Query: 764 XXXXXYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXXXXXIQYTMKS 585 Y LLVEGTGL AVMG +GVDG T SNHIMEVQQ LG I YTM S Sbjct: 1228 VKGETYELLVEGTGLLAVMGIDGVDGRNTKSNHIMEVQQRLGIEAARISIIDEINYTMSS 1287 Query: 584 HGMTIDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADHLFNASVNGRD 405 HGMTIDLRHMMLLADLMT+KGEVLGITR G+QKMKDSVLMLASFEKT DHLF+ASVNGRD Sbjct: 1288 HGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFSASVNGRD 1347 Query: 404 DKIEGVSECIIMGIPMQIGTGILKVRQRVPPVQLSKGLEPLI 279 DKIEGVSECIIMGIPMQIGTG+ K+RQ V V+L+ EP++ Sbjct: 1348 DKIEGVSECIIMGIPMQIGTGMFKLRQCVQQVELNYQSEPML 1389 Score = 451 bits (1160), Expect(2) = 0.0 Identities = 217/271 (80%), Positives = 242/271 (89%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNKSGDPETMCPNDGFVYFRNSELVSGQLG 2468 LWTGKQLF VLLRP++ MRVY+NLTVTEK+Y SG ETMCP+DGFVYFRNSEL+SGQLG Sbjct: 587 LWTGKQLFGVLLRPYSKMRVYVNLTVTEKSY--SGKGETMCPSDGFVYFRNSELISGQLG 644 Query: 2467 KATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNNGFSIGIDDVQPGESLND 2288 KATLGNGNKDGLYSVLLRDY SHAAATCMNRLAKLSARWIGN+GFSIGIDDV PGE+L Sbjct: 645 KATLGNGNKDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVK 704 Query: 2287 SKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRETAANVCMKEL 2108 K+ I + Y KC++ I+ +NEG+L++QPGCDAAQTLEAE+T LN +R+ +CMK L Sbjct: 705 QKQEEIYQNYKKCEDRIQQFNEGKLAVQPGCDAAQTLEAEVTMALNKVRDDIGKICMKAL 764 Query: 2107 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAK 1928 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHFP KSK PAAK Sbjct: 765 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKFPAAK 824 Query: 1927 GFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 GFVA+SF+ GL+ATEFFFHTMGGREGLVDTA Sbjct: 825 GFVAHSFFDGLSATEFFFHTMGGREGLVDTA 855 >ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1 [Nicotiana tomentosiformis] gi|697112870|ref|XP_009610318.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1 [Nicotiana tomentosiformis] Length = 1390 Score = 640 bits (1650), Expect(2) = 0.0 Identities = 348/522 (66%), Positives = 397/522 (76%), Gaps = 4/522 (0%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 L+KALEDL+V+YDNTVRNAS I+QF+YGDDGMDPSQME K G PLNF+RLF KVKATCP Sbjct: 868 LMKALEDLAVYYDNTVRNASTSIIQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCP 927 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGGCSMAFKDSIENFLEKCI-QRFESTRRALKM 1476 S+ SEI V +RLS HDM+ +GGCS AF+ S+ +FL K + + + R AL + Sbjct: 928 PRGEKSLSYSEICEIVNERLSYHDMSPEGGCSEAFRASLSDFLIKHLAETLKRLREALLL 987 Query: 1475 DEDQSVNGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXXXXXXXXGE 1296 D +Q G ++LENIA ISG+T +QL+VFL CISRYHLKR GE Sbjct: 988 DGEQYAGGDREYLENIALNISGITKKQLQVFLNMCISRYHLKRLESGTAIGAIGAQSIGE 1047 Query: 1295 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKPKTATMVKG 1116 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK+I+TPIITA L A M+K Sbjct: 1048 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKINTPIITAKLLSAANLTAARMIKA 1107 Query: 1115 RIEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILRTPKIKLKE 936 RIEKT+LGQVAKS+KIV+ +RLASI +TLDME IQ SQL IDA+TVK+SIL+TPKIKLKE Sbjct: 1108 RIEKTLLGQVAKSVKIVMASRLASIAITLDMETIQVSQLCIDAYTVKQSILQTPKIKLKE 1167 Query: 935 QHVKVLDVRKLEVIPQTDKNRLHFELHSLKNKLPTVVVKGINTVERAVIN---XXXXXXX 765 Q VKVL+ RKLEV PQ +K++LHFELH LKNKLP VVVKGI TV+RAV+N Sbjct: 1168 QQVKVLNHRKLEVFPQANKDKLHFELHRLKNKLPVVVVKGITTVQRAVVNKEQERDRKSD 1227 Query: 764 XXXXXYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXXXXXIQYTMKS 585 Y LLVEGTGL AVMG +GVDG T SNHIMEVQQ LG I YTM S Sbjct: 1228 VKGETYELLVEGTGLLAVMGIDGVDGRNTKSNHIMEVQQRLGIEAARISIIDEINYTMSS 1287 Query: 584 HGMTIDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADHLFNASVNGRD 405 HGMTIDLRHMMLLADLMT+KGEVLGITR G+QKMKDSVLMLASFEKT DHLFNASVNGRD Sbjct: 1288 HGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRD 1347 Query: 404 DKIEGVSECIIMGIPMQIGTGILKVRQRVPPVQLSKGLEPLI 279 DKIEGVSECIIMGIPMQIGTG+ K+RQ V V+L+ EP++ Sbjct: 1348 DKIEGVSECIIMGIPMQIGTGMFKLRQCVQQVELNYQSEPML 1389 Score = 447 bits (1150), Expect(2) = 0.0 Identities = 217/271 (80%), Positives = 240/271 (88%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNKSGDPETMCPNDGFVYFRNSELVSGQLG 2468 LWTGKQLF VLLRP++ MRVY+NLTVTEK+Y SG ETMCP+DGFVYFRNSEL+SGQLG Sbjct: 587 LWTGKQLFGVLLRPYSKMRVYVNLTVTEKSY--SGKGETMCPSDGFVYFRNSELISGQLG 644 Query: 2467 KATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNNGFSIGIDDVQPGESLND 2288 KATLGNGNKDGLYSVLLRDY SHAAATCMNRLAKLSARWIGN+GFSIGIDDV PGE L Sbjct: 645 KATLGNGNKDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGEILVK 704 Query: 2287 SKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRETAANVCMKEL 2108 K I + Y KC++ I+ +NEG+L++QPGCDAAQTLEAE+T LN +R+ +CMK L Sbjct: 705 QKLEEIHQNYKKCEDRIQQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKAL 764 Query: 2107 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAK 1928 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHFP KSK PAAK Sbjct: 765 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKFPAAK 824 Query: 1927 GFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 GFVA+SF+ GL+ATEFFFHTMGGREGLVDTA Sbjct: 825 GFVAHSFFDGLSATEFFFHTMGGREGLVDTA 855 >ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2 [Nicotiana tomentosiformis] gi|697112874|ref|XP_009610320.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2 [Nicotiana tomentosiformis] Length = 1375 Score = 632 bits (1630), Expect(2) = 0.0 Identities = 343/507 (67%), Positives = 388/507 (76%), Gaps = 4/507 (0%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 L+KALEDL+V+YDNTVRNAS I+QF+YGDDGMDPSQME K G PLNF+RLF KVKATCP Sbjct: 868 LMKALEDLAVYYDNTVRNASTSIIQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCP 927 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGGCSMAFKDSIENFLEKCI-QRFESTRRALKM 1476 S+ SEI V +RLS HDM+ +GGCS AF+ S+ +FL K + + + R AL + Sbjct: 928 PRGEKSLSYSEICEIVNERLSYHDMSPEGGCSEAFRASLSDFLIKHLAETLKRLREALLL 987 Query: 1475 DEDQSVNGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXXXXXXXXGE 1296 D +Q G ++LENIA ISG+T +QL+VFL CISRYHLKR GE Sbjct: 988 DGEQYAGGDREYLENIALNISGITKKQLQVFLNMCISRYHLKRLESGTAIGAIGAQSIGE 1047 Query: 1295 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKPKTATMVKG 1116 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK+I+TPIITA L A M+K Sbjct: 1048 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKINTPIITAKLLSAANLTAARMIKA 1107 Query: 1115 RIEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILRTPKIKLKE 936 RIEKT+LGQVAKS+KIV+ +RLASI +TLDME IQ SQL IDA+TVK+SIL+TPKIKLKE Sbjct: 1108 RIEKTLLGQVAKSVKIVMASRLASIAITLDMETIQVSQLCIDAYTVKQSILQTPKIKLKE 1167 Query: 935 QHVKVLDVRKLEVIPQTDKNRLHFELHSLKNKLPTVVVKGINTVERAVIN---XXXXXXX 765 Q VKVL+ RKLEV PQ +K++LHFELH LKNKLP VVVKGI TV+RAV+N Sbjct: 1168 QQVKVLNHRKLEVFPQANKDKLHFELHRLKNKLPVVVVKGITTVQRAVVNKEQERDRKSD 1227 Query: 764 XXXXXYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXXXXXIQYTMKS 585 Y LLVEGTGL AVMG +GVDG T SNHIMEVQQ LG I YTM S Sbjct: 1228 VKGETYELLVEGTGLLAVMGIDGVDGRNTKSNHIMEVQQRLGIEAARISIIDEINYTMSS 1287 Query: 584 HGMTIDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADHLFNASVNGRD 405 HGMTIDLRHMMLLADLMT+KGEVLGITR G+QKMKDSVLMLASFEKT DHLFNASVNGRD Sbjct: 1288 HGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRD 1347 Query: 404 DKIEGVSECIIMGIPMQIGTGILKVRQ 324 DKIEGVSECIIMGIPMQIGTG+ K+RQ Sbjct: 1348 DKIEGVSECIIMGIPMQIGTGMFKLRQ 1374 Score = 447 bits (1150), Expect(2) = 0.0 Identities = 217/271 (80%), Positives = 240/271 (88%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNKSGDPETMCPNDGFVYFRNSELVSGQLG 2468 LWTGKQLF VLLRP++ MRVY+NLTVTEK+Y SG ETMCP+DGFVYFRNSEL+SGQLG Sbjct: 587 LWTGKQLFGVLLRPYSKMRVYVNLTVTEKSY--SGKGETMCPSDGFVYFRNSELISGQLG 644 Query: 2467 KATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNNGFSIGIDDVQPGESLND 2288 KATLGNGNKDGLYSVLLRDY SHAAATCMNRLAKLSARWIGN+GFSIGIDDV PGE L Sbjct: 645 KATLGNGNKDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGEILVK 704 Query: 2287 SKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRETAANVCMKEL 2108 K I + Y KC++ I+ +NEG+L++QPGCDAAQTLEAE+T LN +R+ +CMK L Sbjct: 705 QKLEEIHQNYKKCEDRIQQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKAL 764 Query: 2107 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAK 1928 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHFP KSK PAAK Sbjct: 765 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKFPAAK 824 Query: 1927 GFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 GFVA+SF+ GL+ATEFFFHTMGGREGLVDTA Sbjct: 825 GFVAHSFFDGLSATEFFFHTMGGREGLVDTA 855 >ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X1 [Solanum tuberosum] Length = 1394 Score = 635 bits (1639), Expect(2) = 0.0 Identities = 345/522 (66%), Positives = 395/522 (75%), Gaps = 4/522 (0%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 L+KALEDL+V+YD+TVRNAS CIVQF+YGDDGMDPSQME K G PLNF+RLF KVKATCP Sbjct: 867 LMKALEDLAVYYDSTVRNASACIVQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCP 926 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGGCSMAFKDSIENFLEKCI-QRFESTRRALKM 1476 G S+ SEI V +RLS HDMT +GGCS AF+ S+ +FL K + + ++ R +L + Sbjct: 927 PGGEKSLSYSEICEIVNERLSYHDMTPEGGCSEAFRSSLSDFLIKNLAETLKNLRESLLL 986 Query: 1475 DEDQSVNGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXXXXXXXXGE 1296 E+Q +LE IA ISG+T +QL+VFL TCISRYHLKR GE Sbjct: 987 GEEQYEGDDRGYLEKIALNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGE 1046 Query: 1295 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKPKTATMVKG 1116 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK+I+TPIIT L A M+K Sbjct: 1047 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKITTPIITTKLLSAANLTAARMIKA 1106 Query: 1115 RIEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILRTPKIKLKE 936 RIEKT+LGQVAKS+KIVL +RLASI ++LDME IQ SQL IDA+TVK+SIL+T KIKLKE Sbjct: 1107 RIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKE 1166 Query: 935 QHVKVLDVRKLEVIPQTDKNRLHFELHSLKNKLPTVVVKGINTVERAVIN---XXXXXXX 765 +KVL+ RKLEV PQ +K++LHFELH LKNKLP VVVKGI TV+RAV+N Sbjct: 1167 HQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKND 1226 Query: 764 XXXXXYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXXXXXIQYTMKS 585 Y LLVEGTGL AVMG EGVDG T SNHIMEVQ TLG I YTM S Sbjct: 1227 VKGETYELLVEGTGLLAVMGIEGVDGRYTKSNHIMEVQNTLGIEAARVSIIDEINYTMSS 1286 Query: 584 HGMTIDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADHLFNASVNGRD 405 HGMTIDLRHMMLLADLMT+KGEVLGITR G+QKMKDSVLMLASFEKT DHLFNASVNGRD Sbjct: 1287 HGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRD 1346 Query: 404 DKIEGVSECIIMGIPMQIGTGILKVRQRVPPVQLSKGLEPLI 279 DKIEGV+ECIIMGIPM IGTG+ K+RQRV V+L+ +P+I Sbjct: 1347 DKIEGVTECIIMGIPMTIGTGMFKLRQRVEQVELNYQPDPII 1388 Score = 443 bits (1139), Expect(2) = 0.0 Identities = 215/271 (79%), Positives = 239/271 (88%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNKSGDPETMCPNDGFVYFRNSELVSGQLG 2468 LWTGKQLF +LLRP++ MRVY+NLTVTEK+Y SG ETMCP+DGFVYFRNSEL+SGQLG Sbjct: 586 LWTGKQLFHMLLRPYSKMRVYVNLTVTEKSY--SGKGETMCPSDGFVYFRNSELISGQLG 643 Query: 2467 KATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNNGFSIGIDDVQPGESLND 2288 KATLGNGNKDGLYSVLLRDY SHAAATCMNRLAKLSARWIGN+GFSIGIDDV PGE+L Sbjct: 644 KATLGNGNKDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVK 703 Query: 2287 SKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRETAANVCMKEL 2108 K+ I Y KC++ I +NEG+L++QPGCDAAQTLEAE+T LN +R+ +CMK L Sbjct: 704 QKQGEIHRNYKKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKAL 763 Query: 2107 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAK 1928 WRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHFP KSK PAAK Sbjct: 764 DWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAK 823 Query: 1927 GFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 GFVA+SF+ GL+ATEFFFHTMGGREGLVDTA Sbjct: 824 GFVAHSFFDGLSATEFFFHTMGGREGLVDTA 854 >ref|XP_010033188.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit rpc1 [Eucalyptus grandis] Length = 1402 Score = 609 bits (1571), Expect(2) = 0.0 Identities = 325/527 (61%), Positives = 394/527 (74%), Gaps = 9/527 (1%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 LIKALEDLS+HYDNTVRNASGCIVQF+YGDDGMDP+ MEGK+G PLNF+RLF KVKATCP Sbjct: 876 LIKALEDLSIHYDNTVRNASGCIVQFLYGDDGMDPALMEGKNGFPLNFDRLFMKVKATCP 935 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGG---CSMAFKDSIENFLEKCIQRFESTRRAL 1482 + +H + P EI + ++L E + T DGG S AFK S++ FL + + + + + Sbjct: 936 SREHKYLSPVEISALIEQKLPESESTPDGGLSDASKAFKKSVKAFLLE--EHEKGSEIIM 993 Query: 1481 KMDEDQSVNGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXXXXXXXX 1302 K ED +V + + +A+ I G+T QL+ F++TC+SRYHLKR Sbjct: 994 KFGEDATVENQETVIR-VAQKIGGITEGQLRAFIDTCMSRYHLKRIEAGSAIGAIGAQSI 1052 Query: 1301 GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKPKTATMV 1122 GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAK+I TPIITA L+ DD A MV Sbjct: 1053 GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKILTPIITAELDRDDNVNIARMV 1112 Query: 1121 KGRIEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILRTPKIKL 942 K RI+KT+LGQ+AKSIK V+T+RL SIV+TLDM RI+ SQL IDA+TV+ESI++TPKIK Sbjct: 1113 KARIDKTVLGQIAKSIKTVMTSRLGSIVITLDMNRIEDSQLCIDANTVRESIMQTPKIKP 1172 Query: 941 KEQHVKVLDVRKLEVIPQTDKNRLHFELHSLKNKLPTVVVKGINTVERAVIN------XX 780 K+ + VLDV KLEV+P D+ +LHFELHSLKN LP V+VKGI TVERAV+N Sbjct: 1173 KQLQINVLDVTKLEVVPLVDRGKLHFELHSLKNMLPNVIVKGIKTVERAVVNKGKEKYKD 1232 Query: 779 XXXXXXXXXXYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXXXXXIQ 600 Y+L+VEGTGL+ VMGTEGVDG KT SNHI+E+QQTLG IQ Sbjct: 1233 KEGKVKEREKYSLVVEGTGLQEVMGTEGVDGRKTKSNHIIEIQQTLGIEAARWCIIEEIQ 1292 Query: 599 YTMKSHGMTIDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADHLFNAS 420 + M +HGM+ID+RHMMLLADLMTF+GEVLGITRFGIQKM SVLMLASFEKT+DHLF+AS Sbjct: 1293 FIMSNHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTSDHLFHAS 1352 Query: 419 VNGRDDKIEGVSECIIMGIPMQIGTGILKVRQRVPPVQLSKGLEPLI 279 +G+ DKIEGVSECIIMG+PMQ+GTGILKV QR +L+ +P+I Sbjct: 1353 ASGKADKIEGVSECIIMGVPMQLGTGILKVIQRDEKPELTYASDPII 1399 Score = 468 bits (1204), Expect(2) = 0.0 Identities = 227/276 (82%), Positives = 246/276 (89%), Gaps = 5/276 (1%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNKSGDP-----ETMCPNDGFVYFRNSELV 2483 LWTGKQ+FSVLLRP+A MRV++NLT+ EK Y+K + ETMCPNDGFVYFRNSEL+ Sbjct: 588 LWTGKQIFSVLLRPNARMRVFVNLTLKEKNYSKPKNASERELETMCPNDGFVYFRNSELI 647 Query: 2482 SGQLGKATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNNGFSIGIDDVQPG 2303 SGQLGKATLGNGNKDGLYS+LLRDYN+HAAA+CMNRLAKLSARWIGN+GFSIGIDDVQP Sbjct: 648 SGQLGKATLGNGNKDGLYSILLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPD 707 Query: 2302 ESLNDSKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRETAANV 2123 LN+ KR IL GY CDE I+ YN+G+L LQPGCDAAQTLEA ITG+LN IR V Sbjct: 708 NDLNERKRETILNGYNSCDEKIELYNKGKLDLQPGCDAAQTLEAVITGILNQIRNETGQV 767 Query: 2122 CMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSK 1943 CMK+LHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPR+SK Sbjct: 768 CMKKLHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRQSK 827 Query: 1942 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA Sbjct: 828 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 863 >gb|KCW52757.1| hypothetical protein EUGRSUZ_J02108 [Eucalyptus grandis] Length = 1184 Score = 609 bits (1571), Expect(2) = 0.0 Identities = 325/527 (61%), Positives = 394/527 (74%), Gaps = 9/527 (1%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 LIKALEDLS+HYDNTVRNASGCIVQF+YGDDGMDP+ MEGK+G PLNF+RLF KVKATCP Sbjct: 658 LIKALEDLSIHYDNTVRNASGCIVQFLYGDDGMDPALMEGKNGFPLNFDRLFMKVKATCP 717 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGG---CSMAFKDSIENFLEKCIQRFESTRRAL 1482 + +H + P EI + ++L E + T DGG S AFK S++ FL + + + + + Sbjct: 718 SREHKYLSPVEISALIEQKLPESESTPDGGLSDASKAFKKSVKAFLLE--EHEKGSEIIM 775 Query: 1481 KMDEDQSVNGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXXXXXXXX 1302 K ED +V + + +A+ I G+T QL+ F++TC+SRYHLKR Sbjct: 776 KFGEDATVENQETVIR-VAQKIGGITEGQLRAFIDTCMSRYHLKRIEAGSAIGAIGAQSI 834 Query: 1301 GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKPKTATMV 1122 GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAK+I TPIITA L+ DD A MV Sbjct: 835 GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKILTPIITAELDRDDNVNIARMV 894 Query: 1121 KGRIEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILRTPKIKL 942 K RI+KT+LGQ+AKSIK V+T+RL SIV+TLDM RI+ SQL IDA+TV+ESI++TPKIK Sbjct: 895 KARIDKTVLGQIAKSIKTVMTSRLGSIVITLDMNRIEDSQLCIDANTVRESIMQTPKIKP 954 Query: 941 KEQHVKVLDVRKLEVIPQTDKNRLHFELHSLKNKLPTVVVKGINTVERAVIN------XX 780 K+ + VLDV KLEV+P D+ +LHFELHSLKN LP V+VKGI TVERAV+N Sbjct: 955 KQLQINVLDVTKLEVVPLVDRGKLHFELHSLKNMLPNVIVKGIKTVERAVVNKGKEKYKD 1014 Query: 779 XXXXXXXXXXYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXXXXXIQ 600 Y+L+VEGTGL+ VMGTEGVDG KT SNHI+E+QQTLG IQ Sbjct: 1015 KEGKVKEREKYSLVVEGTGLQEVMGTEGVDGRKTKSNHIIEIQQTLGIEAARWCIIEEIQ 1074 Query: 599 YTMKSHGMTIDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADHLFNAS 420 + M +HGM+ID+RHMMLLADLMTF+GEVLGITRFGIQKM SVLMLASFEKT+DHLF+AS Sbjct: 1075 FIMSNHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTSDHLFHAS 1134 Query: 419 VNGRDDKIEGVSECIIMGIPMQIGTGILKVRQRVPPVQLSKGLEPLI 279 +G+ DKIEGVSECIIMG+PMQ+GTGILKV QR +L+ +P+I Sbjct: 1135 ASGKADKIEGVSECIIMGVPMQLGTGILKVIQRDEKPELTYASDPII 1181 Score = 468 bits (1204), Expect(2) = 0.0 Identities = 227/276 (82%), Positives = 246/276 (89%), Gaps = 5/276 (1%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNKSGDP-----ETMCPNDGFVYFRNSELV 2483 LWTGKQ+FSVLLRP+A MRV++NLT+ EK Y+K + ETMCPNDGFVYFRNSEL+ Sbjct: 370 LWTGKQIFSVLLRPNARMRVFVNLTLKEKNYSKPKNASERELETMCPNDGFVYFRNSELI 429 Query: 2482 SGQLGKATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNNGFSIGIDDVQPG 2303 SGQLGKATLGNGNKDGLYS+LLRDYN+HAAA+CMNRLAKLSARWIGN+GFSIGIDDVQP Sbjct: 430 SGQLGKATLGNGNKDGLYSILLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPD 489 Query: 2302 ESLNDSKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRETAANV 2123 LN+ KR IL GY CDE I+ YN+G+L LQPGCDAAQTLEA ITG+LN IR V Sbjct: 490 NDLNERKRETILNGYNSCDEKIELYNKGKLDLQPGCDAAQTLEAVITGILNQIRNETGQV 549 Query: 2122 CMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSK 1943 CMK+LHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPR+SK Sbjct: 550 CMKKLHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRQSK 609 Query: 1942 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA Sbjct: 610 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 645 >ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Solanum lycopersicum] Length = 1390 Score = 633 bits (1632), Expect(2) = 0.0 Identities = 343/522 (65%), Positives = 395/522 (75%), Gaps = 4/522 (0%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 L+KALEDL+V+YD+TVRNAS CIVQF+YGDDGMDPS+ME K G PLNF+RLF KVKATCP Sbjct: 867 LMKALEDLAVYYDSTVRNASACIVQFMYGDDGMDPSRMEEKKGRPLNFSRLFMKVKATCP 926 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGGCSMAFKDSIENFLEKCI-QRFESTRRALKM 1476 G S+ SEI V +RLS HDMT +GGCS AF+ S+ +FL K + + ++ R +L + Sbjct: 927 PGGEKSLSYSEICEIVNERLSYHDMTPEGGCSEAFRASLSDFLIKSLAETLKNLRESLLL 986 Query: 1475 DEDQSVNGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXXXXXXXXGE 1296 E+Q +LE I ISG+T +QL+VFL TCISRYHLKR GE Sbjct: 987 GEEQYEGDDRGYLEKIVLNISGITKKQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGE 1046 Query: 1295 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKPKTATMVKG 1116 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK+I+TPIITA L A M+K Sbjct: 1047 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKITTPIITAKLLSAGNLTAARMIKA 1106 Query: 1115 RIEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILRTPKIKLKE 936 RIEKT+LGQVAKS+KIVL +RLASI ++LDME IQ SQL IDA+TVK+SIL+T KIKLKE Sbjct: 1107 RIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKE 1166 Query: 935 QHVKVLDVRKLEVIPQTDKNRLHFELHSLKNKLPTVVVKGINTVERAVIN---XXXXXXX 765 +KVL+ RKLEV PQ +K++LHFELH LKNKLP VVVKGI TV+RAV+N Sbjct: 1167 HQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKND 1226 Query: 764 XXXXXYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXXXXXIQYTMKS 585 Y LLVEGTGL AVMG EGVDG T SNHIMEVQ TLG I YTM S Sbjct: 1227 VKGETYELLVEGTGLLAVMGIEGVDGRYTKSNHIMEVQHTLGIEAARVSIIDEINYTMSS 1286 Query: 584 HGMTIDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADHLFNASVNGRD 405 HGMTIDLRHMMLLADLMT+KGEVLGITR G+QKMKDSVLMLASFEKT DHLFNASVNGRD Sbjct: 1287 HGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRD 1346 Query: 404 DKIEGVSECIIMGIPMQIGTGILKVRQRVPPVQLSKGLEPLI 279 DKIEGV+ECIIMGIPM IGTG+ K+RQRV V+L+ +P++ Sbjct: 1347 DKIEGVTECIIMGIPMTIGTGMFKLRQRVEHVELNYQPDPMM 1388 Score = 440 bits (1131), Expect(2) = 0.0 Identities = 214/271 (78%), Positives = 238/271 (87%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNKSGDPETMCPNDGFVYFRNSELVSGQLG 2468 LWTGKQLF VLLRP++ MRVY+NLT+TEK+Y SG ETMC +DGFVYFRNSEL+SGQLG Sbjct: 586 LWTGKQLFHVLLRPYSKMRVYVNLTLTEKSY--SGKGETMCSSDGFVYFRNSELISGQLG 643 Query: 2467 KATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNNGFSIGIDDVQPGESLND 2288 KATLGNGNKDGLYSVLLRDY SHAAATCMNRLAKLSARWIGN+GFSIGIDDV PGE+L Sbjct: 644 KATLGNGNKDGLYSVLLRDYESHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVK 703 Query: 2287 SKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRETAANVCMKEL 2108 K+ I Y KC++ I +NEG+L++QPGCDAAQTLEAE+T LN +R+ +CMK L Sbjct: 704 QKQGEIHRNYKKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKAL 763 Query: 2107 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAK 1928 WRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHFP KSK PAAK Sbjct: 764 DWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAK 823 Query: 1927 GFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 GFVA+SF+ GL+ATEFFFHTMGGREGLVDTA Sbjct: 824 GFVAHSFFDGLSATEFFFHTMGGREGLVDTA 854 >ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus communis] Length = 1383 Score = 614 bits (1584), Expect(2) = 0.0 Identities = 331/530 (62%), Positives = 394/530 (74%), Gaps = 12/530 (2%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 LIK LEDLS+ YDNTVRNASGCIVQF+YGDDG+DP+ MEGK GVPLN +RLFSKVKATCP Sbjct: 853 LIKGLEDLSIQYDNTVRNASGCIVQFLYGDDGLDPASMEGKGGVPLNLDRLFSKVKATCP 912 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGGCSMAFKDSIENFLEKCIQRFESTRRALKMD 1473 + + P +I + V L +HDM G CS AFK S+ +FL +R ES + Sbjct: 913 VREEDYLSPLDISDVVENLLLKHDMALGGICSEAFKKSLTSFLGSHAKRLESMMKLADGV 972 Query: 1472 EDQS--------VNGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXXX 1317 ED + + G +K +E +A I GV+ +Q++VF++TCI+RY KR Sbjct: 973 EDPTSENIQTGGIRGNSKIIERLAHKIFGVSERQIEVFVKTCINRYLWKRVEPGTAIGAI 1032 Query: 1316 XXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKPK 1137 GEPGTQMTLKTFHFAGVASMN+T GVPRIKEIINGAK+ISTPIITA LE + Sbjct: 1033 GAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKKISTPIITAELEQNTNVT 1092 Query: 1136 TATMVKGRIEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILRT 957 A + KGRI+KT+LGQVAKSIKIV+T+R AS+V+TLDM+ IQ +QLS+DA+ VKE+ILRT Sbjct: 1093 AARIAKGRIQKTVLGQVAKSIKIVMTSRSASVVITLDMKTIQNAQLSLDANIVKEAILRT 1152 Query: 956 PKIKLKEQHVKVLDVRKLEVIPQTDKNRLHFELHSLKNKLPTVVVKGINTVERAVI---N 786 P+IKLK QH+KVLD RKLEVIP D+ R+HFELH+LKN LP+++V+GI TVERAVI Sbjct: 1153 PRIKLKPQHIKVLDTRKLEVIPLGDRERVHFELHNLKNLLPSIIVQGIKTVERAVIAQKK 1212 Query: 785 XXXXXXXXXXXXYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXXXXX 606 YN+LVEG GL VMGTEGVDGCKTTSNH+MEVQ+ LG Sbjct: 1213 HDGKANDQELPTYNMLVEGMGLDLVMGTEGVDGCKTTSNHVMEVQKFLGIEAARKCIIDE 1272 Query: 605 IQYTMKSHGMTIDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADHLFN 426 I TM+ HGM+ID+RHMMLL DLMTFKGEVLGITRFGIQKM SVLMLASFEKTADHL++ Sbjct: 1273 INQTMEHHGMSIDIRHMMLLGDLMTFKGEVLGITRFGIQKMDKSVLMLASFEKTADHLYH 1332 Query: 425 ASVNGRDDKIEGVSECIIMGIPMQIGTGILKVRQRV-PPVQLSKGLEPLI 279 A+V GRDDKIEGVSECIIMGIPMQIGTGILKV+QRV PP L+ G + +I Sbjct: 1333 AAVFGRDDKIEGVSECIIMGIPMQIGTGILKVQQRVDPPPVLNYGSDSII 1382 Score = 449 bits (1155), Expect(2) = 0.0 Identities = 224/278 (80%), Positives = 243/278 (87%), Gaps = 7/278 (2%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNK--SGDP---ETMCPNDGFVYFRNSELV 2483 LWTGKQLFSVLLRP+A++RVY+NL V EK Y+K GD ETMCPNDGFVY RNSEL+ Sbjct: 563 LWTGKQLFSVLLRPNANVRVYVNLIVREKIYSKPKKGDKREKETMCPNDGFVYIRNSELI 622 Query: 2482 SGQLGKATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLS--ARWIGNNGFSIGIDDVQ 2309 SGQLGKATLGNGNKDGLYS+LLRDYN HAAATCMNRLAKL ARWIGN+GFSIGIDDVQ Sbjct: 623 SGQLGKATLGNGNKDGLYSILLRDYNPHAAATCMNRLAKLRQVARWIGNHGFSIGIDDVQ 682 Query: 2308 PGESLNDSKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRETAA 2129 PG+ L D K I GY +CD+LI+ YNEG+L L+PGCDA QTLE+EIT LN +RE A Sbjct: 683 PGKKLIDGKGKTISNGYQQCDKLIEQYNEGKLLLKPGCDATQTLESEITEKLNKLREEAG 742 Query: 2128 NVCMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRK 1949 +VCMKELHWRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GFIDRSLPHFPRK Sbjct: 743 DVCMKELHWRNSPLIMSQCGSKGSVINISQMVACVGQQSVGGRRAPDGFIDRSLPHFPRK 802 Query: 1948 SKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 SKTPAAKGFVANSFYSGL ATEFFFHTM GREGLVDTA Sbjct: 803 SKTPAAKGFVANSFYSGLMATEFFFHTMAGREGLVDTA 840 >ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X2 [Citrus sinensis] Length = 1404 Score = 615 bits (1586), Expect(2) = 0.0 Identities = 329/525 (62%), Positives = 387/525 (73%), Gaps = 7/525 (1%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 LIKALEDLS+ YDN+VRNA GCIVQF+YGDDGMDP+ MEGK G PLNF+RL KVKATCP Sbjct: 885 LIKALEDLSIQYDNSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCP 944 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGGCSMAFKDSIENFLEKCIQRFESTRRALKMD 1473 + P ++ V K+L+ + S CS AF +S+ F E + + + +K Sbjct: 945 PAGQRYLSPQQVSEIVEKQLAAYGKES---CSEAFLNSLRKFFEGQQDKLD---KKIKFV 998 Query: 1472 EDQSVNGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXXXXXXXXGEP 1293 ED + K++ LE + SG+T +QL+VF++TC SRYH+KR GEP Sbjct: 999 EDIGWDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEP 1058 Query: 1292 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKPKTATMVKGR 1113 GTQMTLKTFHFAGVASMN+T GVPRIKEIINGAKRISTPIITA LEC+D A +VKGR Sbjct: 1059 GTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGR 1118 Query: 1112 IEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILRTPKIKLKEQ 933 IEKT+LGQVAKSIKIV+T+RLASIV+ LDME IQ + L I+A VKESI++TPKIKLK+Q Sbjct: 1119 IEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLKQQ 1178 Query: 932 HVKVLDVRKLEVIPQTDKNRLHFELHSLKNKLPTVVVKGINTVERAVI-----NXXXXXX 768 H+KVLD RKLE+ P DK+++HFEL+SLKN LP V+VKGI TVER VI Sbjct: 1179 HIKVLDFRKLEIFPPVDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKE 1238 Query: 767 XXXXXXYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXXXXXIQYTMK 588 Y LLVEGTGL+AVMG EG+DGCKT SNHI EVQQTLG I TMK Sbjct: 1239 NGEKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMK 1298 Query: 587 SHGMTIDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADHLFNASVNGR 408 +HGM+ID RHMMLLADLMTF+GEVLGITRFGIQKM SVLMLASFEKTADHLFNASVNGR Sbjct: 1299 AHGMSIDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGR 1358 Query: 407 DDKIEGVSECIIMGIPMQIGTGILKVRQR--VPPVQLSKGLEPLI 279 DD+IEGVSECIIMGIPM +GTGILK+RQR VPP+ +P++ Sbjct: 1359 DDRIEGVSECIIMGIPMPLGTGILKIRQRDAVPPMLKYGAPDPIM 1403 Score = 447 bits (1151), Expect(2) = 0.0 Identities = 222/280 (79%), Positives = 239/280 (85%), Gaps = 9/280 (3%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNKS-----GDPE----TMCPNDGFVYFRN 2495 LWTGKQLFSVL+RPHA+MRVY+NLTV EKTY+ GD E TMCPNDGFVYFRN Sbjct: 593 LWTGKQLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRN 652 Query: 2494 SELVSGQLGKATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNNGFSIGIDD 2315 SEL+SGQLGKATLGNGNKDGLYSVLLRDY +HA + CMNRLAKLSARWIGN+GFSIGIDD Sbjct: 653 SELISGQLGKATLGNGNKDGLYSVLLRDYGAHATSGCMNRLAKLSARWIGNHGFSIGIDD 712 Query: 2314 VQPGESLNDSKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRET 2135 VQP + L+D K I E Y C+ IK YNEG+L L+PGCDAAQTLEA IT +LN IRE Sbjct: 713 VQPKKELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIRED 772 Query: 2134 AANVCMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFP 1955 A CM L WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAPNGFIDRSLPHFP Sbjct: 773 AGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFP 832 Query: 1954 RKSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 RK+K PAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTA Sbjct: 833 RKAKEPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTA 872 >gb|KDO73040.1| hypothetical protein CISIN_1g000828mg [Citrus sinensis] gi|641854233|gb|KDO73041.1| hypothetical protein CISIN_1g000828mg [Citrus sinensis] Length = 1265 Score = 612 bits (1578), Expect(2) = 0.0 Identities = 328/525 (62%), Positives = 386/525 (73%), Gaps = 7/525 (1%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 LIKALEDLS+ YDN+VRNA GCIVQF+YGDDGMDP+ MEGK G PLNF+RL KVKATCP Sbjct: 746 LIKALEDLSIQYDNSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCP 805 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGGCSMAFKDSIENFLEKCIQRFESTRRALKMD 1473 + P ++ V K+L+ + S CS AF +S+ F E + + + +K Sbjct: 806 PAGQRYLSPQQVSEIVEKQLAAYGKES---CSEAFLNSLRKFFEGQQDKLD---KKIKFV 859 Query: 1472 EDQSVNGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXXXXXXXXGEP 1293 ED + K++ LE + SG+T +QL+VF++TC SRY +KR GEP Sbjct: 860 EDIGWDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYRVKRVEAGTAIGAIGAQSIGEP 919 Query: 1292 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKPKTATMVKGR 1113 GTQMTLKTFHFAGVASMN+T GVPRIKEIINGAKRISTPIITA LEC+D A +VKGR Sbjct: 920 GTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGR 979 Query: 1112 IEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILRTPKIKLKEQ 933 IEKT+LGQVAKSIKIV+T+RLASIV+ LDME IQ + L I+A VKESI++TPKIKLK+Q Sbjct: 980 IEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLKQQ 1039 Query: 932 HVKVLDVRKLEVIPQTDKNRLHFELHSLKNKLPTVVVKGINTVERAVI-----NXXXXXX 768 H+KVLD RKLE+ P DK+++HFEL+SLKN LP V+VKGI TVER VI Sbjct: 1040 HIKVLDFRKLEIFPPVDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKE 1099 Query: 767 XXXXXXYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXXXXXIQYTMK 588 Y LLVEGTGL+AVMG EG+DGCKT SNHI EVQQTLG I TMK Sbjct: 1100 NGEKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMK 1159 Query: 587 SHGMTIDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADHLFNASVNGR 408 +HGM+ID RHMMLLADLMTF+GEVLGITRFGIQKM SVLMLASFEKTADHLFNASVNGR Sbjct: 1160 AHGMSIDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGR 1219 Query: 407 DDKIEGVSECIIMGIPMQIGTGILKVRQR--VPPVQLSKGLEPLI 279 DD+IEGVSECIIMGIPM +GTGILK+RQR VPP+ +P++ Sbjct: 1220 DDRIEGVSECIIMGIPMPLGTGILKIRQRDAVPPMLKYGAPDPIM 1264 Score = 447 bits (1151), Expect(2) = 0.0 Identities = 222/280 (79%), Positives = 239/280 (85%), Gaps = 9/280 (3%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNKS-----GDPE----TMCPNDGFVYFRN 2495 LWTGKQLFSVL+RPHA+MRVY+NLTV EKTY+ GD E TMCPNDGFVYFRN Sbjct: 454 LWTGKQLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRN 513 Query: 2494 SELVSGQLGKATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNNGFSIGIDD 2315 SEL+SGQLGKATLGNGNKDGLYSVLLRDY +HA + CMNRLAKLSARWIGN+GFSIGIDD Sbjct: 514 SELISGQLGKATLGNGNKDGLYSVLLRDYGAHATSGCMNRLAKLSARWIGNHGFSIGIDD 573 Query: 2314 VQPGESLNDSKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRET 2135 VQP + L+D K I E Y C+ IK YNEG+L L+PGCDAAQTLEA IT +LN IRE Sbjct: 574 VQPKKELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIRED 633 Query: 2134 AANVCMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFP 1955 A CM L WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAPNGFIDRSLPHFP Sbjct: 634 AGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFP 693 Query: 1954 RKSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 RK+K PAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTA Sbjct: 694 RKAKEPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTA 733 >ref|XP_008222562.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Prunus mume] Length = 1425 Score = 603 bits (1556), Expect(2) = 0.0 Identities = 324/519 (62%), Positives = 382/519 (73%), Gaps = 14/519 (2%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 L K LEDLSV YDNTVRNASGCIVQF YGDDGMDP+ MEG+ G PL+F RLF K KATCP Sbjct: 880 LSKILEDLSVQYDNTVRNASGCIVQFCYGDDGMDPAMMEGEGGAPLDFRRLFLKAKATCP 939 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGGCSMAFKDSIENFLEKCIQRFESTRRALKMD 1473 AG++ S+ E+ V RLS+ DMT D GCS FK S+E FL+K + T +D Sbjct: 940 AGENESLSLEEVSEIVKDRLSKQDMTPDRGCSAGFKSSLEEFLDKYAKELRKTHDTFVLD 999 Query: 1472 EDQSVNGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXXXXXXXXGEP 1293 + + K+ LE I + ISGVT +QL+VFL TCISRYH K+ GEP Sbjct: 1000 QSPAWKEKSASLEKIVQNISGVTCKQLEVFLNTCISRYHSKKVEAGTAIGVIGAQSIGEP 1059 Query: 1292 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKPKTATMVKGR 1113 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAK+ISTPI+TA LE ++ K A +V GR Sbjct: 1060 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIVTAILEHNNNAKFARVVAGR 1119 Query: 1112 IEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILRTPKIKLKEQ 933 IEKTMLGQV+KSIKIV+T+R ASIV+TLDM IQ + LSIDA+ VKESILRTP+IKLK++ Sbjct: 1120 IEKTMLGQVSKSIKIVMTSRSASIVITLDMVMIQDAHLSIDANVVKESILRTPRIKLKQE 1179 Query: 932 HVKVLDVRKLEVIPQ-TDKNRLHFELHSLKNKLPTVVVKGINTVERAVIN---------- 786 HVKVLD+RKLE++PQ D++RLHF L+ LK+ LP V+V+GI+TV+R VI+ Sbjct: 1180 HVKVLDIRKLEILPQEADRSRLHFNLYYLKSVLPKVIVRGISTVQRVVIDAKEVKKNKKD 1239 Query: 785 ---XXXXXXXXXXXXYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXX 615 Y L EGTGL +VMGTEGVDGCKTTSN +MEVQ+TLG Sbjct: 1240 LEVTCADGDKREEKEYKLFAEGTGLLSVMGTEGVDGCKTTSNDVMEVQRTLGIEAARVCI 1299 Query: 614 XXXIQYTMKSHGMTIDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADH 435 I++TMKSHGM ID RHM+ LAD+MT++GEVLGITRFG+QKM SVLM+ASFE+T D Sbjct: 1300 IEEIKHTMKSHGMNIDDRHMIFLADVMTYRGEVLGITRFGVQKMDKSVLMMASFERTDDI 1359 Query: 434 LFNASVNGRDDKIEGVSECIIMGIPMQIGTGILKVRQRV 318 LFNA VNGR DK+EGVSE IIMGIPMQIGTGI KVRQRV Sbjct: 1360 LFNACVNGRVDKVEGVSESIIMGIPMQIGTGIFKVRQRV 1398 Score = 451 bits (1159), Expect(2) = 0.0 Identities = 217/273 (79%), Positives = 243/273 (89%), Gaps = 2/273 (0%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNKS--GDPETMCPNDGFVYFRNSELVSGQ 2474 LWTGKQLFSVL+RP++++RVYLN TV EK+Y+K+ G PE MCPNDGFVYFRNSEL++GQ Sbjct: 595 LWTGKQLFSVLVRPNSNVRVYLNFTVNEKSYSKTEDGGPEAMCPNDGFVYFRNSELIAGQ 654 Query: 2473 LGKATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNNGFSIGIDDVQPGESL 2294 LGK TLGNGNKDGLYSVLLRDY +HAAA+CMNRLAKLSARWIGN+GFSIGI DVQP ++L Sbjct: 655 LGKGTLGNGNKDGLYSVLLRDYKAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPSDNL 714 Query: 2293 NDSKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRETAANVCMK 2114 + K I EGY KC IK YNEG+L L+PGCDAAQ+LE+ IT +LN IR+ +CM+ Sbjct: 715 YNEKEKIIKEGYNKCAGKIKLYNEGQLPLEPGCDAAQSLESGITKILNNIRDQTGKLCMQ 774 Query: 2113 ELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPA 1934 LHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRK+KTPA Sbjct: 775 TLHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKAKTPA 834 Query: 1933 AKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 AKGFVA+SFYSGLTATEFFFHTMGGREGLVDTA Sbjct: 835 AKGFVASSFYSGLTATEFFFHTMGGREGLVDTA 867 >ref|XP_012064930.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Jatropha curcas] Length = 1413 Score = 588 bits (1517), Expect(2) = 0.0 Identities = 317/531 (59%), Positives = 390/531 (73%), Gaps = 13/531 (2%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 LIK LEDL + YDN V +A+G +VQF+YGDDG+DP++MEGK GVPLN +RLF KVKATCP Sbjct: 882 LIKGLEDLFIDYDNKVLSANGSVVQFVYGDDGLDPAKMEGKGGVPLNLDRLFMKVKATCP 941 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGGCSMAFKDSIENFLEKCIQRFEST------- 1494 AG+ + PS+I + V L ++D D CS AFK ++ FL ++R E+ Sbjct: 942 AGEGDYLSPSDISSWVKTLLDDYDKAFDSVCSEAFKQNLSFFLGNHVKRLETMLKLDNGV 1001 Query: 1493 --RRALKMDEDQSVNGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXX 1320 + + M+E V G T +E +A I G+T +QL+VFL+TCI RY KR Sbjct: 1002 EEQNSENMEEVGGVRGNTTNIEKLAHKIYGITKRQLEVFLKTCIVRYLWKRIEPGTAIGA 1061 Query: 1319 XXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKP 1140 GEPGTQMTLKTFHFAGVASMN+T GVPRIKEIINGAK+ISTPIIT LE + Sbjct: 1062 IGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKKISTPIITTELENNTNV 1121 Query: 1139 KTATMVKGRIEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILR 960 A +VK RIEKT+LGQ+AKSIKIV+T+R AS+VVTLDM+ IQ +QLS+DA+TV+ESIL+ Sbjct: 1122 NAARIVKTRIEKTVLGQIAKSIKIVMTSRSASVVVTLDMKTIQEAQLSLDANTVRESILQ 1181 Query: 959 TPKIKLKEQHVKVLDVRKLEVIPQTDKNRLHFELHSLKNKLPTVVVKGINTVERAVI--- 789 TP+ KLK Q++KVLD+RKLEVIP D+ ++HFELHSLKN LP++ VKGI TVERAVI Sbjct: 1182 TPRTKLKPQNIKVLDIRKLEVIPLGDREKVHFELHSLKNMLPSITVKGIKTVERAVIAQK 1241 Query: 788 NXXXXXXXXXXXXYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXXXX 609 YN+ VEG GL+ VMGTEGVDG KTTSNH+ME+ + LG Sbjct: 1242 KREGKASIQELPTYNMFVEGMGLQEVMGTEGVDGRKTTSNHVMEIFKYLGIEAARKCIID 1301 Query: 608 XIQYTMKSHGMTIDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADHLF 429 I+ M+ HGM+ID RHMMLLADLMTFKGEVLGITRFGIQKM SVLMLASFEKT+DHL+ Sbjct: 1302 EIKNVMEGHGMSIDTRHMMLLADLMTFKGEVLGITRFGIQKMDKSVLMLASFEKTSDHLY 1361 Query: 428 NASVNGRDDKIEGVSECIIMGIPMQIGTGILKVRQRVPP-VQLSKGLEPLI 279 A+V+GRDD+IEGVSECIIMGIPM++GTGILKV+QRV P L+KGL+P++ Sbjct: 1362 TAAVHGRDDRIEGVSECIIMGIPMRLGTGILKVQQRVDPRPMLTKGLDPIM 1412 Score = 466 bits (1198), Expect(2) = 0.0 Identities = 229/276 (82%), Positives = 247/276 (89%), Gaps = 5/276 (1%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNKS--GDP---ETMCPNDGFVYFRNSELV 2483 LWTGKQLFSVLLRP+A++RVYLNLTV EK Y+K GD ETMCPNDGFVY RNSEL+ Sbjct: 594 LWTGKQLFSVLLRPNANVRVYLNLTVKEKIYSKPKPGDKREKETMCPNDGFVYIRNSELI 653 Query: 2482 SGQLGKATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNNGFSIGIDDVQPG 2303 SGQLGKAT+GNGNKDGLYS+LLRDYN HAAA CMNRLAKLSARWIGN+GFSIGIDDVQPG Sbjct: 654 SGQLGKATIGNGNKDGLYSILLRDYNPHAAAICMNRLAKLSARWIGNHGFSIGIDDVQPG 713 Query: 2302 ESLNDSKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRETAANV 2123 + L D K I GY CD+LI+ YNEG+L+L+PGCDA QTLEAEIT LN +RE A +V Sbjct: 714 KKLIDEKAKTISNGYQHCDKLIQEYNEGKLALKPGCDAIQTLEAEITETLNKLREQAGDV 773 Query: 2122 CMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSK 1943 CMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GF+DRSLPHFPRKSK Sbjct: 774 CMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFMDRSLPHFPRKSK 833 Query: 1942 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA Sbjct: 834 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 869 >ref|XP_012471450.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1 [Gossypium raimondii] gi|763752836|gb|KJB20224.1| hypothetical protein B456_003G139100 [Gossypium raimondii] Length = 1398 Score = 600 bits (1546), Expect(2) = 0.0 Identities = 325/523 (62%), Positives = 385/523 (73%), Gaps = 5/523 (0%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 LIKALEDLS+HYDNT RNASGCIVQFIYGDDGMDP+ MEGK G PLNF+RL KVKATCP Sbjct: 882 LIKALEDLSIHYDNTCRNASGCIVQFIYGDDGMDPASMEGKSGFPLNFDRLLMKVKATCP 941 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGGCSMAFKDSIENFLEKCIQRFESTRRALKMD 1473 + I + +++ +HD DG CS AFK S++ FLE + +R +++ Sbjct: 942 PVDQKYLPADAIPQMLEEQVVKHD--PDGVCSEAFKKSLKGFLEG---QKNELKRVMQLV 996 Query: 1472 EDQSVNGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXXXXXXXXGEP 1293 + + K++ LE+++ I G+T +QL+VF+ CI RY K GEP Sbjct: 997 SNSAQ--KSEILEDVSHKICGITDRQLEVFIRICIGRYRSKVIEAGTAIGAIGAQSIGEP 1054 Query: 1292 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKPKTATMVKGR 1113 GTQMTLKTFHFAGVASMN+T GVPRIKEIIN AK+ISTPIITA LE D A MVKGR Sbjct: 1055 GTQMTLKTFHFAGVASMNITQGVPRIKEIINAAKKISTPIITAELEFDSNVNVARMVKGR 1114 Query: 1112 IEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILRTPKIKLKEQ 933 IEKT+LGQVAKSIKIV+T+RLAS+V++LDMERIQ +QL IDA+ VKESIL+TPK+KLKEQ Sbjct: 1115 IEKTVLGQVAKSIKIVMTSRLASVVISLDMERIQDAQLHIDANVVKESILQTPKLKLKEQ 1174 Query: 932 HVKVLDVRKLEVIPQTDKNRLHFELHSLKNKLPTVVVKGINTVERAVI----NXXXXXXX 765 HVKVLDV+KLEV+P D++R+HFELHSLKN LP VVVKGI TVER VI Sbjct: 1175 HVKVLDVKKLEVVPPADRSRIHFELHSLKNLLPLVVVKGIKTVERVVIAEKKKDNKSQNK 1234 Query: 764 XXXXXYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXXXXXIQYTMKS 585 Y L VEG GL+ VMG EG+DG KT SNH+ME+ Q LG I TM S Sbjct: 1235 EAKKLYQLFVEGMGLQTVMGVEGIDGRKTMSNHVMEMLQILGIEAARSCIINEIAATMAS 1294 Query: 584 HGMTIDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADHLFNASVNGRD 405 HGM+ID+RHMMLL D+MTF+GEVLGITRFGIQKM S+LMLASFEKT DHLFNASVNGRD Sbjct: 1295 HGMSIDIRHMMLLGDVMTFRGEVLGITRFGIQKMDKSILMLASFEKTGDHLFNASVNGRD 1354 Query: 404 DKIEGVSECIIMGIPMQIGTGILKVRQRVPPVQLSK-GLEPLI 279 DKIEGV+ECIIMGIPMQ+GTGILKV QRV P+ L + G +P++ Sbjct: 1355 DKIEGVTECIIMGIPMQLGTGILKVMQRVDPLPLLQYGADPVL 1397 Score = 454 bits (1169), Expect(2) = 0.0 Identities = 224/280 (80%), Positives = 243/280 (86%), Gaps = 9/280 (3%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNKS-----GDPE----TMCPNDGFVYFRN 2495 LWTGKQLF+VLLRPHA +RVYLNLTV E+ Y++ GD E TMCPNDGFVY RN Sbjct: 590 LWTGKQLFNVLLRPHASVRVYLNLTVKERNYSRKIAKRIGDKEIEVETMCPNDGFVYIRN 649 Query: 2494 SELVSGQLGKATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNNGFSIGIDD 2315 SEL+ GQLGKATLGNGNKDGLYS+LLRDYN+HAAATCMNRLAK+SARWIGN+GFSIGIDD Sbjct: 650 SELLCGQLGKATLGNGNKDGLYSILLRDYNAHAAATCMNRLAKMSARWIGNHGFSIGIDD 709 Query: 2314 VQPGESLNDSKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRET 2135 VQPG+ LND+K + Y KCDE I+ +NEG+L L+PGCDAAQTLEA IT VLN IR+ Sbjct: 710 VQPGKRLNDAKGVTLSGNYKKCDEQIQMFNEGKLQLKPGCDAAQTLEANITEVLNKIRDE 769 Query: 2134 AANVCMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFP 1955 VCM+ELHWRNSPLIMSQCGSKGS INISQMIACVGQQSVGGRRAPNGFIDRSLPHF Sbjct: 770 TGKVCMRELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRSLPHFH 829 Query: 1954 RKSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 R SKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA Sbjct: 830 RGSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 869 >ref|XP_012471451.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2 [Gossypium raimondii] Length = 1395 Score = 600 bits (1546), Expect(2) = 0.0 Identities = 325/523 (62%), Positives = 385/523 (73%), Gaps = 5/523 (0%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 LIKALEDLS+HYDNT RNASGCIVQFIYGDDGMDP+ MEGK G PLNF+RL KVKATCP Sbjct: 879 LIKALEDLSIHYDNTCRNASGCIVQFIYGDDGMDPASMEGKSGFPLNFDRLLMKVKATCP 938 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGGCSMAFKDSIENFLEKCIQRFESTRRALKMD 1473 + I + +++ +HD DG CS AFK S++ FLE + +R +++ Sbjct: 939 PVDQKYLPADAIPQMLEEQVVKHD--PDGVCSEAFKKSLKGFLEG---QKNELKRVMQLV 993 Query: 1472 EDQSVNGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXXXXXXXXGEP 1293 + + K++ LE+++ I G+T +QL+VF+ CI RY K GEP Sbjct: 994 SNSAQ--KSEILEDVSHKICGITDRQLEVFIRICIGRYRSKVIEAGTAIGAIGAQSIGEP 1051 Query: 1292 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKPKTATMVKGR 1113 GTQMTLKTFHFAGVASMN+T GVPRIKEIIN AK+ISTPIITA LE D A MVKGR Sbjct: 1052 GTQMTLKTFHFAGVASMNITQGVPRIKEIINAAKKISTPIITAELEFDSNVNVARMVKGR 1111 Query: 1112 IEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILRTPKIKLKEQ 933 IEKT+LGQVAKSIKIV+T+RLAS+V++LDMERIQ +QL IDA+ VKESIL+TPK+KLKEQ Sbjct: 1112 IEKTVLGQVAKSIKIVMTSRLASVVISLDMERIQDAQLHIDANVVKESILQTPKLKLKEQ 1171 Query: 932 HVKVLDVRKLEVIPQTDKNRLHFELHSLKNKLPTVVVKGINTVERAVI----NXXXXXXX 765 HVKVLDV+KLEV+P D++R+HFELHSLKN LP VVVKGI TVER VI Sbjct: 1172 HVKVLDVKKLEVVPPADRSRIHFELHSLKNLLPLVVVKGIKTVERVVIAEKKKDNKSQNK 1231 Query: 764 XXXXXYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXXXXXIQYTMKS 585 Y L VEG GL+ VMG EG+DG KT SNH+ME+ Q LG I TM S Sbjct: 1232 EAKKLYQLFVEGMGLQTVMGVEGIDGRKTMSNHVMEMLQILGIEAARSCIINEIAATMAS 1291 Query: 584 HGMTIDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADHLFNASVNGRD 405 HGM+ID+RHMMLL D+MTF+GEVLGITRFGIQKM S+LMLASFEKT DHLFNASVNGRD Sbjct: 1292 HGMSIDIRHMMLLGDVMTFRGEVLGITRFGIQKMDKSILMLASFEKTGDHLFNASVNGRD 1351 Query: 404 DKIEGVSECIIMGIPMQIGTGILKVRQRVPPVQLSK-GLEPLI 279 DKIEGV+ECIIMGIPMQ+GTGILKV QRV P+ L + G +P++ Sbjct: 1352 DKIEGVTECIIMGIPMQLGTGILKVMQRVDPLPLLQYGADPVL 1394 Score = 454 bits (1169), Expect(2) = 0.0 Identities = 224/280 (80%), Positives = 243/280 (86%), Gaps = 9/280 (3%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNKS-----GDPE----TMCPNDGFVYFRN 2495 LWTGKQLF+VLLRPHA +RVYLNLTV E+ Y++ GD E TMCPNDGFVY RN Sbjct: 587 LWTGKQLFNVLLRPHASVRVYLNLTVKERNYSRKIAKRIGDKEIEVETMCPNDGFVYIRN 646 Query: 2494 SELVSGQLGKATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNNGFSIGIDD 2315 SEL+ GQLGKATLGNGNKDGLYS+LLRDYN+HAAATCMNRLAK+SARWIGN+GFSIGIDD Sbjct: 647 SELLCGQLGKATLGNGNKDGLYSILLRDYNAHAAATCMNRLAKMSARWIGNHGFSIGIDD 706 Query: 2314 VQPGESLNDSKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRET 2135 VQPG+ LND+K + Y KCDE I+ +NEG+L L+PGCDAAQTLEA IT VLN IR+ Sbjct: 707 VQPGKRLNDAKGVTLSGNYKKCDEQIQMFNEGKLQLKPGCDAAQTLEANITEVLNKIRDE 766 Query: 2134 AANVCMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFP 1955 VCM+ELHWRNSPLIMSQCGSKGS INISQMIACVGQQSVGGRRAPNGFIDRSLPHF Sbjct: 767 TGKVCMRELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRSLPHFH 826 Query: 1954 RKSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 R SKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA Sbjct: 827 RGSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 866 >gb|KDP44150.1| hypothetical protein JCGZ_05617 [Jatropha curcas] Length = 1275 Score = 588 bits (1517), Expect(2) = 0.0 Identities = 317/531 (59%), Positives = 390/531 (73%), Gaps = 13/531 (2%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 LIK LEDL + YDN V +A+G +VQF+YGDDG+DP++MEGK GVPLN +RLF KVKATCP Sbjct: 744 LIKGLEDLFIDYDNKVLSANGSVVQFVYGDDGLDPAKMEGKGGVPLNLDRLFMKVKATCP 803 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGGCSMAFKDSIENFLEKCIQRFEST------- 1494 AG+ + PS+I + V L ++D D CS AFK ++ FL ++R E+ Sbjct: 804 AGEGDYLSPSDISSWVKTLLDDYDKAFDSVCSEAFKQNLSFFLGNHVKRLETMLKLDNGV 863 Query: 1493 --RRALKMDEDQSVNGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXX 1320 + + M+E V G T +E +A I G+T +QL+VFL+TCI RY KR Sbjct: 864 EEQNSENMEEVGGVRGNTTNIEKLAHKIYGITKRQLEVFLKTCIVRYLWKRIEPGTAIGA 923 Query: 1319 XXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKP 1140 GEPGTQMTLKTFHFAGVASMN+T GVPRIKEIINGAK+ISTPIIT LE + Sbjct: 924 IGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKKISTPIITTELENNTNV 983 Query: 1139 KTATMVKGRIEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILR 960 A +VK RIEKT+LGQ+AKSIKIV+T+R AS+VVTLDM+ IQ +QLS+DA+TV+ESIL+ Sbjct: 984 NAARIVKTRIEKTVLGQIAKSIKIVMTSRSASVVVTLDMKTIQEAQLSLDANTVRESILQ 1043 Query: 959 TPKIKLKEQHVKVLDVRKLEVIPQTDKNRLHFELHSLKNKLPTVVVKGINTVERAVI--- 789 TP+ KLK Q++KVLD+RKLEVIP D+ ++HFELHSLKN LP++ VKGI TVERAVI Sbjct: 1044 TPRTKLKPQNIKVLDIRKLEVIPLGDREKVHFELHSLKNMLPSITVKGIKTVERAVIAQK 1103 Query: 788 NXXXXXXXXXXXXYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXXXX 609 YN+ VEG GL+ VMGTEGVDG KTTSNH+ME+ + LG Sbjct: 1104 KREGKASIQELPTYNMFVEGMGLQEVMGTEGVDGRKTTSNHVMEIFKYLGIEAARKCIID 1163 Query: 608 XIQYTMKSHGMTIDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADHLF 429 I+ M+ HGM+ID RHMMLLADLMTFKGEVLGITRFGIQKM SVLMLASFEKT+DHL+ Sbjct: 1164 EIKNVMEGHGMSIDTRHMMLLADLMTFKGEVLGITRFGIQKMDKSVLMLASFEKTSDHLY 1223 Query: 428 NASVNGRDDKIEGVSECIIMGIPMQIGTGILKVRQRVPP-VQLSKGLEPLI 279 A+V+GRDD+IEGVSECIIMGIPM++GTGILKV+QRV P L+KGL+P++ Sbjct: 1224 TAAVHGRDDRIEGVSECIIMGIPMRLGTGILKVQQRVDPRPMLTKGLDPIM 1274 Score = 466 bits (1198), Expect(2) = 0.0 Identities = 229/276 (82%), Positives = 247/276 (89%), Gaps = 5/276 (1%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNKS--GDP---ETMCPNDGFVYFRNSELV 2483 LWTGKQLFSVLLRP+A++RVYLNLTV EK Y+K GD ETMCPNDGFVY RNSEL+ Sbjct: 456 LWTGKQLFSVLLRPNANVRVYLNLTVKEKIYSKPKPGDKREKETMCPNDGFVYIRNSELI 515 Query: 2482 SGQLGKATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNNGFSIGIDDVQPG 2303 SGQLGKAT+GNGNKDGLYS+LLRDYN HAAA CMNRLAKLSARWIGN+GFSIGIDDVQPG Sbjct: 516 SGQLGKATIGNGNKDGLYSILLRDYNPHAAAICMNRLAKLSARWIGNHGFSIGIDDVQPG 575 Query: 2302 ESLNDSKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRETAANV 2123 + L D K I GY CD+LI+ YNEG+L+L+PGCDA QTLEAEIT LN +RE A +V Sbjct: 576 KKLIDEKAKTISNGYQHCDKLIQEYNEGKLALKPGCDAIQTLEAEITETLNKLREQAGDV 635 Query: 2122 CMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSK 1943 CMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GF+DRSLPHFPRKSK Sbjct: 636 CMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFMDRSLPHFPRKSK 695 Query: 1942 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA Sbjct: 696 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 731 >ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit rpc1 [Cucumis melo] Length = 1400 Score = 600 bits (1547), Expect(2) = 0.0 Identities = 325/524 (62%), Positives = 383/524 (73%), Gaps = 11/524 (2%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 LIKALEDLS++YD++VRNA GCIVQF YGDDGMDP+QMEGK G PLNF RLF K KATCP Sbjct: 872 LIKALEDLSIYYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCP 931 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGGCSMAFKDSIENFLEKCIQRFESTRRALKMD 1473 + + + PSE V RLS+ D + + GCS AF S++ FL K I+ + + L D Sbjct: 932 SDGNKILSPSEFSETVEDRLSKDDASPECGCSPAFIGSLKIFLNKYIEAQKKSWSTLLAD 991 Query: 1472 EDQSV---------NGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXX 1320 + +V N N+ + I+GVT +QL+VFL+TC+SRYH K+ Sbjct: 992 NETAVDKSIISSSDNDNIVIRNNVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGA 1051 Query: 1319 XXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKP 1140 GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPI+TA L DD Sbjct: 1052 IGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTHDDNV 1111 Query: 1139 KTATMVKGRIEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILR 960 A MVK RIEKT LGQ+AK I+IV+++R A I + LDME+I+ ++L +DA+ VK++IL Sbjct: 1112 NIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILV 1171 Query: 959 TPKIKLKEQHVKVLDVRKLEVIPQ-TDKNRLHFELHSLKNKLPTVVVKGINTVERAVINX 783 TPK+KLK +H+ VLD RKL V+PQ D+N+LHF LH LKN LP VVVKGI TV RAVI Sbjct: 1172 TPKLKLKHEHINVLDDRKLRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRAVIKE 1231 Query: 782 XXXXXXXXXXXYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXXXXXI 603 +LLVEGTGL+AVMGTEGVDGC T SNHI+EVQQ LG I Sbjct: 1232 EKDKARNAKKF-SLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEI 1290 Query: 602 QYTMKSHGMTIDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADHLFNA 423 +YTM+SHGM+ID+RHMMLL DLMTF+GEVLGITRFGIQKM SVLMLASFEKTADHLFNA Sbjct: 1291 KYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNA 1350 Query: 422 SVNGRDDKIEGVSECIIMGIPMQIGTGILKVRQRVP-PVQLSKG 294 SVNGRDDKIEGVSEC+IMGIPM +GTG+LKVRQRV P QL G Sbjct: 1351 SVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRVSVPRQLPYG 1394 Score = 453 bits (1165), Expect(2) = 0.0 Identities = 221/275 (80%), Positives = 242/275 (88%), Gaps = 4/275 (1%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNK----SGDPETMCPNDGFVYFRNSELVS 2480 LWTGKQLFSVL+RPHA M+VYLNLTV EK+Y+K + ETMCPNDGFVYFRNSEL+S Sbjct: 585 LWTGKQLFSVLVRPHASMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELIS 644 Query: 2479 GQLGKATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNNGFSIGIDDVQPGE 2300 GQ+GKATLGNGNKDGLYSVLLRDY +HAAA CMNRLAKLSARWIGN+GFSIGIDDVQPG+ Sbjct: 645 GQVGKATLGNGNKDGLYSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGD 704 Query: 2299 SLNDSKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRETAANVC 2120 L K+ ILEGY CD+ I +N G L + GCDAAQ+LEA+IT +LN IRE ANVC Sbjct: 705 QLVXKKQTTILEGYRDCDKQINLFNTGNLPPEAGCDAAQSLEAKITQILNGIREATANVC 764 Query: 2119 MKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 1940 M+ LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFIDRSLPHF RK+KT Sbjct: 765 MQNLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKT 824 Query: 1939 PAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 PAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA Sbjct: 825 PAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 859 >ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Cucumis sativus] Length = 1400 Score = 600 bits (1548), Expect(2) = 0.0 Identities = 324/524 (61%), Positives = 382/524 (72%), Gaps = 11/524 (2%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 LIKALEDLS+HYD++VRNA GCIVQF YGDDGMDP+QMEGK G PLNF RLF K KATCP Sbjct: 872 LIKALEDLSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCP 931 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGGCSMAFKDSIENFLEKCIQRFESTRRALKMD 1473 + + + PSE V RLS+ D + + GCS AF S++ FL K ++ + + L D Sbjct: 932 SDGNKILSPSEFSETVEDRLSKDDASPECGCSPAFVGSLKIFLNKYVEAQKKSWGTLLAD 991 Query: 1472 EDQSV---------NGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXX 1320 + +V N + + I+GVT +QL+VFL+TC+SRYH K+ Sbjct: 992 NESAVDKSIISSSDNDNIVIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGA 1051 Query: 1319 XXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKP 1140 GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPI+TA L DD Sbjct: 1052 IGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTHDDNV 1111 Query: 1139 KTATMVKGRIEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILR 960 A MVK RIEKT LGQ+AK I+IV+++R A I + LDME+I+ ++L +DA+ VK++IL Sbjct: 1112 NIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILV 1171 Query: 959 TPKIKLKEQHVKVLDVRKLEVIPQ-TDKNRLHFELHSLKNKLPTVVVKGINTVERAVINX 783 TPK+KLK +H+ VLD RKL V+PQ D+N+LHF LH LKN LP VVVKGI TV RAVI Sbjct: 1172 TPKLKLKHEHINVLDDRKLRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRAVIKE 1231 Query: 782 XXXXXXXXXXXYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXXXXXI 603 +LLVEGTGL+AVMGTEGVDGC T SNHI+EVQQ LG I Sbjct: 1232 EKDKARNAKKF-SLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEI 1290 Query: 602 QYTMKSHGMTIDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADHLFNA 423 +YTM+SHGM+ID+RHMMLL DLMTF+GEVLGITRFGIQKM SVLMLASFEKTADHLFNA Sbjct: 1291 KYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNA 1350 Query: 422 SVNGRDDKIEGVSECIIMGIPMQIGTGILKVRQRVP-PVQLSKG 294 SVNGRDDKIEGVSEC+IMGIPM +GTG+LKVRQRV P QL G Sbjct: 1351 SVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRVSVPQQLPYG 1394 Score = 452 bits (1162), Expect(2) = 0.0 Identities = 220/275 (80%), Positives = 242/275 (88%), Gaps = 4/275 (1%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNK----SGDPETMCPNDGFVYFRNSELVS 2480 LWTGKQLFSVL+RPHA M+VYLNLTV EK+Y+K + ETMCPNDGFVYFRNSEL+S Sbjct: 585 LWTGKQLFSVLVRPHASMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELIS 644 Query: 2479 GQLGKATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNNGFSIGIDDVQPGE 2300 GQ+GKATLGNGNKDGLYSVLLRDY +HAAA CMNRLAKLSARWIGN+GFSIGIDDVQPG+ Sbjct: 645 GQVGKATLGNGNKDGLYSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGD 704 Query: 2299 SLNDSKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRETAANVC 2120 L K+ ILEGY CD+ I +N G L + GCDAAQ+LE++IT +LN IRE ANVC Sbjct: 705 QLVKKKQTTILEGYRDCDKQINLFNTGNLPPEAGCDAAQSLESKITQILNGIREATANVC 764 Query: 2119 MKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 1940 M+ LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFIDRSLPHF RK+KT Sbjct: 765 MQNLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKT 824 Query: 1939 PAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 PAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA Sbjct: 825 PAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 859 >ref|XP_010092991.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis] gi|587863463|gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis] Length = 1179 Score = 619 bits (1597), Expect(2) = 0.0 Identities = 326/520 (62%), Positives = 396/520 (76%), Gaps = 2/520 (0%) Frame = -1 Query: 1832 LIKALEDLSVHYDNTVRNASGCIVQFIYGDDGMDPSQMEGKDGVPLNFNRLFSKVKATCP 1653 LIKALEDL VHYDNTVRNAS CI+QF YGDDGMDP+ MEGK+G PLNF RLF K KATCP Sbjct: 658 LIKALEDLFVHYDNTVRNASACIIQFCYGDDGMDPAHMEGKNGAPLNFERLFLKAKATCP 717 Query: 1652 AGQHASMFPSEIRNAVCKRLSEHDMTSDGGCSMAFKDSIENFLEKCIQRFESTRRALKMD 1473 AG + P ++ V RLS+ DMT +GGCS AFK+S+++FL+ ++ F+ T + Sbjct: 718 AGGTEKLSPEKVSELVESRLSKKDMTPEGGCSAAFKNSLKSFLDNYVKAFKRTWDPCEST 777 Query: 1472 EDQSVNGKTKFLENIAEAISGVTSQQLKVFLETCISRYHLKRXXXXXXXXXXXXXXXGEP 1293 E + + +NI +SG T++QL+VFL+TCISRYH K+ GEP Sbjct: 778 EGHAKMENSATTKNIVLQLSGATARQLEVFLDTCISRYHSKKIEAGTAIGAIGAQSIGEP 837 Query: 1292 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITATLECDDKPKTATMVKGR 1113 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAK+ISTPIITA LECD+ A +V+GR Sbjct: 838 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIITAILECDNNVNFARIVRGR 897 Query: 1112 IEKTMLGQVAKSIKIVLTARLASIVVTLDMERIQASQLSIDAHTVKESILRTPKIKLKEQ 933 IEK LGQVAKSIK V+T+R+AS+V+TLDMERIQ + LSIDA+ V++SIL+TP+IKLK++ Sbjct: 898 IEKISLGQVAKSIKTVMTSRVASVVITLDMERIQDALLSIDANVVRDSILQTPRIKLKKE 957 Query: 932 HVKVLDVRKLEVIP-QTDKNRLHFELHSLKNKLPTVVVKGINTVERAVINXXXXXXXXXX 756 H++VLD +KLE++P ++++++L+ L L L ++VKGI TVERAVI+ Sbjct: 958 HIRVLDFKKLEILPYESNRSKLYHHLQFLAKMLQNILVKGIKTVERAVISSEKDKKTDIS 1017 Query: 755 XXYNLLVEGTGLRAVMGTEGVDGCKTTSNHIMEVQQTLGXXXXXXXXXXXIQYTMKSHGM 576 Y LLVEGTGL VMGTEGVDG T +NHI+EVQQTLG I+YTMKSHGM Sbjct: 1018 KKYKLLVEGTGLLGVMGTEGVDGRNTKTNHIIEVQQTLGIEAARTCIIDEIEYTMKSHGM 1077 Query: 575 TIDLRHMMLLADLMTFKGEVLGITRFGIQKMKDSVLMLASFEKTADHLFNASVNGRDDKI 396 +ID RHMMLLAD+MT +GEVLGITRFGIQKM SVLMLASFEKTADHLFNASVNGR+DKI Sbjct: 1078 SIDTRHMMLLADVMTSRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGREDKI 1137 Query: 395 EGVSECIIMGIPMQIGTGILKVRQRVP-PVQLSKGLEPLI 279 EGVSECIIMGIPMQIGTG++KVRQRV P LS G +P++ Sbjct: 1138 EGVSECIIMGIPMQIGTGMIKVRQRVDVPPMLSYGPKPIL 1177 Score = 431 bits (1107), Expect(2) = 0.0 Identities = 211/276 (76%), Positives = 234/276 (84%), Gaps = 5/276 (1%) Frame = -2 Query: 2647 LWTGKQLFSVLLRPHADMRVYLNLTVTEKTYNKS-----GDPETMCPNDGFVYFRNSELV 2483 LWTGKQLFSVL+RP+A++RV+LNLTV EK Y+ + ETMCP DGFV FRNSEL+ Sbjct: 370 LWTGKQLFSVLVRPNANVRVFLNLTVREKNYSNKLQENEREFETMCPADGFVCFRNSELI 429 Query: 2482 SGQLGKATLGNGNKDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNNGFSIGIDDVQPG 2303 SGQLGK TLGNGNKDGLYS+LLRDY +HAAA CMNRLAKLSARWIGN+GFSIGIDDVQP Sbjct: 430 SGQLGKGTLGNGNKDGLYSILLRDYKAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPS 489 Query: 2302 ESLNDSKRARILEGYGKCDELIKNYNEGRLSLQPGCDAAQTLEAEITGVLNTIRETAANV 2123 + L D K +I EG CD+ IK+Y EG L +PGCDAAQ+LEA ITG+LN IRE + Sbjct: 490 DKLRDEKDQKINEGAKDCDDKIKSYKEGNLPPEPGCDAAQSLEAVITGILNKIREETGKL 549 Query: 2122 CMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSK 1943 CMK L WRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAPNGFIDRSLPHFPRK K Sbjct: 550 CMKALPWRNSPLIMSQCGSKGSLINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKDK 609 Query: 1942 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTA 1835 TPAAKGFV++SFY GL+ATEFFFHTMGGREGLVDTA Sbjct: 610 TPAAKGFVSHSFYDGLSATEFFFHTMGGREGLVDTA 645