BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00007718
         (3769 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein...  1723   0.0  
ref|XP_010261923.1| PREDICTED: RNA polymerase-associated protein...  1696   0.0  
ref|XP_006342363.1| PREDICTED: RNA polymerase-associated protein...  1662   0.0  
ref|XP_006451561.1| hypothetical protein CICLE_v10007295mg [Citr...  1662   0.0  
ref|XP_009800504.1| PREDICTED: RNA polymerase-associated protein...  1662   0.0  
ref|XP_006490821.1| PREDICTED: RNA polymerase-associated protein...  1660   0.0  
ref|XP_009596804.1| PREDICTED: RNA polymerase-associated protein...  1657   0.0  
ref|XP_004243718.1| PREDICTED: RNA polymerase-associated protein...  1656   0.0  
ref|XP_007012670.1| Binding isoform 1 [Theobroma cacao] gi|50878...  1654   0.0  
ref|XP_012480641.1| PREDICTED: RNA polymerase-associated protein...  1640   0.0  
ref|XP_010047494.1| PREDICTED: RNA polymerase-associated protein...  1633   0.0  
ref|XP_008242215.1| PREDICTED: RNA polymerase-associated protein...  1630   0.0  
ref|XP_012077030.1| PREDICTED: RNA polymerase-associated protein...  1629   0.0  
ref|XP_006587039.1| PREDICTED: RNA polymerase-associated protein...  1627   0.0  
ref|XP_014501145.1| PREDICTED: protein CTR9 homolog [Vigna radia...  1625   0.0  
ref|XP_011045987.1| PREDICTED: RNA polymerase-associated protein...  1623   0.0  
gb|KHG23804.1| RNA polymerase-associated CTR9 [Gossypium arboreum]   1623   0.0  
ref|XP_008450914.1| PREDICTED: RNA polymerase-associated protein...  1621   0.0  
gb|KOM39935.1| hypothetical protein LR48_Vigan04g013300 [Vigna a...  1620   0.0  
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein...  1620   0.0  

>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
            vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
            product [Vitis vinifera]
          Length = 1091

 Score = 1723 bits (4462), Expect = 0.0
 Identities = 870/1085 (80%), Positives = 956/1085 (88%), Gaps = 2/1085 (0%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            MA VYIPVQNSEEEVRV LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGK++QFR
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFI+ATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRIDMHE STWVGKGQLLLAKGD E A  AF I+L+GD DNV A LGQACV F RG+YSD
Sbjct: 121  SRIDMHEASTWVGKGQLLLAKGDVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SL+LYKRALQVYP CP AVR+GI LC YKLGQ+ KA++AFQRVLQLDPENVEALVALGI+
Sbjct: 181  SLDLYKRALQVYPDCPAAVRVGIGLCCYKLGQFEKARKAFQRVLQLDPENVEALVALGIM 240

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            DL T++ASGIR+GMEKMQRAFEIYPYC+++LNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241  DLHTNDASGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE NKP +F+LPYYGLGQVQLKLGDFRS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRS 360

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            SLSNFEKVLEVYPENCE LK LGHIY+QLGQT+K QE++RKA KIDPRDA+A+LDLGELL
Sbjct: 361  SLSNFEKVLEVYPENCEALKALGHIYVQLGQTEKAQEYLRKATKIDPRDAQAFLDLGELL 420

Query: 2379 ISTDAGAALDAFKTARGLLKKGGE-VPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            I++D GAALDAFKTARGLLKKGGE VPIELLNNIGVL FERGEFELA+QTFKEA+GD IW
Sbjct: 421  ITSDTGAALDAFKTARGLLKKGGEEVPIELLNNIGVLYFERGEFELAEQTFKEAVGDGIW 480

Query: 2202 CNFINGAPQSCAIDASASIHQHKDMQLFHRLEQAGITVELPWNKISTLFNMARLLEQLHD 2023
             +FI+    S A DA  S+H  KDMQLFH+LE+ G  VELPWNK++ LFN+ARLLEQL++
Sbjct: 481  LSFIDDKAYSYANDARTSMHHFKDMQLFHQLEEDGHFVELPWNKVTVLFNLARLLEQLNN 540

Query: 2022 TERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQLSIELIGDALKVDDKCPNALLMLG 1843
            T+ ASILYRLILFK+PDYIDAYLRLAAIAKARNN+QLSIEL+GDALKV+DK PN+L MLG
Sbjct: 541  TKTASILYRLILFKFPDYIDAYLRLAAIAKARNNIQLSIELVGDALKVNDKGPNSLCMLG 600

Query: 1842 DLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGNWNYFAAVRSEKRAPKLEATHLEKA 1663
            DLELKNDDWVKAK+TFR+A DAT G+DSYATL LGNWNYFAA+RSEKRAPKLEATHLEKA
Sbjct: 601  DLELKNDDWVKAKETFRSASDATDGKDSYATLSLGNWNYFAAIRSEKRAPKLEATHLEKA 660

Query: 1662 KELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGNVFVQMPDVWINL 1483
            KELYT+VLVQH ANLYAANGAGVVLAEKG FDVSKD+FTQVQEAASG+VFVQMPDVWINL
Sbjct: 661  KELYTRVLVQHNANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 720

Query: 1482 AHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1303
            AHV+FAQGNF LAVKMYQNCLRKFYYNTD+QVLLYLARTHYEAEQWQDCKKTLLRAIHLA
Sbjct: 721  AHVYFAQGNFALAVKMYQNCLRKFYYNTDSQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 780

Query: 1302 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRVFSQLSAASNLHFHGF 1123
            PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVR+FSQLSAASNLHFHGF
Sbjct: 781  PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRIFSQLSAASNLHFHGF 840

Query: 1122 DEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHRQKLAREVTMXXXXXXXXXXXXKFQ 943
            DEKKIETHVGYCKHLLEAAKVHCEAAEREE QN+HR +LAR+V +            KFQ
Sbjct: 841  DEKKIETHVGYCKHLLEAAKVHCEAAEREELQNRHRVELARQVNLAEEARRKAEEQRKFQ 900

Query: 942  LEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKRKDRSQIXXXXXXXXXXXXXXXXXX 763
            LE+RKQEDELK+VMQQE+H ER+KEQWKS+   SKRK+RSQI                  
Sbjct: 901  LERRKQEDELKRVMQQEQHFERVKEQWKSNNLNSKRKERSQIDDDEGGQSERRRRKGGKR 960

Query: 762  XXXXXXXXXRYETEEAEAXXXXXXXXXXXXDTSMNYGKHSNQMNDQDD-GEDNAQDLLAA 586
                      Y++EEA A            DT+MN+ + +NQMN+QDD GED+AQDLLAA
Sbjct: 961  RKKDKSR---YDSEEARADAMDDQDEMEDEDTNMNHRESTNQMNNQDDDGEDDAQDLLAA 1017

Query: 585  AGLEDSDAEDDTAVPSYKSRMRRALSESEDDEPLQRQPESSPERENYGEMQESDGEVRGD 406
            AGLEDSDAEDD A PS  +R +RA SES++DEP  ++PESSP REN  E+QESDGE++ D
Sbjct: 1018 AGLEDSDAEDDMAGPSSGNRRKRAWSESDEDEPQDQRPESSPVRENSAEVQESDGEIKDD 1077

Query: 405  DEKVN 391
            ++K N
Sbjct: 1078 NDKPN 1082


>ref|XP_010261923.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Nelumbo
            nucifera]
          Length = 1095

 Score = 1696 bits (4391), Expect = 0.0
 Identities = 860/1087 (79%), Positives = 945/1087 (86%), Gaps = 3/1087 (0%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            MACVYIPVQNSEEEVRV LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGK++QFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGSSPEID+YYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFI+ATQYYNKA
Sbjct: 61   QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRIDMHEPSTWVGKGQLLLAKG+ E AS AF I+LE + DNV A LGQACV F RG++SD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLEENSDNVPALLGQACVQFSRGRFSD 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SLELYKRALQVYP CPGAVRLG+ LCRYKLGQ+ KA+QAFQRVLQLDPENVEALVALGI+
Sbjct: 181  SLELYKRALQVYPNCPGAVRLGLGLCRYKLGQFEKARQAFQRVLQLDPENVEALVALGIM 240

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            DL T+EA GIR+GMEKMQ+AFEIYPYC++SLNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241  DLHTNEADGIRKGMEKMQQAFEIYPYCAMSLNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GP KSHSYYNLARSYHSKGDYEKAG+YYMASVKEINKP EF+LP+YGLGQVQLKLGDFRS
Sbjct: 301  GPMKSHSYYNLARSYHSKGDYEKAGMYYMASVKEINKPHEFVLPFYGLGQVQLKLGDFRS 360

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            SLSNFEKVLEVYPENCETLK +GHIY+QLGQT K  E +RKA +IDPRDA+A+L+LGELL
Sbjct: 361  SLSNFEKVLEVYPENCETLKAVGHIYVQLGQTDKALEILRKATRIDPRDAQAFLELGELL 420

Query: 2379 ISTDAGAALDAFKTARGLLKKGGE-VPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            IS+DAGAAL+AF+TAR LLKKGGE VPIELLNNIGVL FERGEFELA+Q FK+ALGD IW
Sbjct: 421  ISSDAGAALEAFRTARTLLKKGGEEVPIELLNNIGVLHFERGEFELAEQAFKDALGDGIW 480

Query: 2202 CNFINGAPQSCAIDASASIHQHKDMQLFHRLEQAGITVELPWNKISTLFNMARLLEQLHD 2023
             +F++G   S  +D+  S  Q+KDMQLF RLE  G++VELPW+K++T+FN+ARLLEQLHD
Sbjct: 481  LSFMDGKIFSSTMDSDVSTRQYKDMQLFQRLEVDGVSVELPWDKVTTVFNLARLLEQLHD 540

Query: 2022 TERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQLSIELIGDALKVDDKCPNALLMLG 1843
            TE+ASILYRLILFKYPDY+DAY+RLAAI KARNN+QLSIELI DALK++DKC NAL MLG
Sbjct: 541  TEKASILYRLILFKYPDYLDAYMRLAAITKARNNIQLSIELITDALKINDKCSNALSMLG 600

Query: 1842 DLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGNWNYFAAVRSEKRAPKLEATHLEKA 1663
            +LELK DDWVKAKDTFRAA++AT G+DSYATL LGNWNYFAAVRSEKR PKLEATHLEKA
Sbjct: 601  NLELKGDDWVKAKDTFRAAREATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKA 660

Query: 1662 KELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGNVFVQMPDVWINL 1483
            KELYTKVLVQ  ANLYAANGA VVLAEKG FDV+KD+FTQVQEAASG++FVQMPDVWINL
Sbjct: 661  KELYTKVLVQRPANLYAANGAAVVLAEKGHFDVAKDIFTQVQEAASGSIFVQMPDVWINL 720

Query: 1482 AHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1303
            AHV+FAQG+F LAVKMYQNCLRKFYYNTD QVLLYLARTHYEAEQWQDCKKTLLRAIHLA
Sbjct: 721  AHVYFAQGHFALAVKMYQNCLRKFYYNTDTQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 780

Query: 1302 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRVFSQLSAASNLHFHGF 1123
            PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAV VFSQLSAAS+LHFHGF
Sbjct: 781  PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVCVFSQLSAASSLHFHGF 840

Query: 1122 DEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHRQKLAREVTMXXXXXXXXXXXXKFQ 943
            DE+KIETHVGYCKHLL+AAKVHCEAAEREEQQN+ R ++AR+VT+            KFQ
Sbjct: 841  DERKIETHVGYCKHLLDAAKVHCEAAEREEQQNRQRLEVARQVTLAEEARRKAEEQRKFQ 900

Query: 942  LEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKRKDRSQIXXXXXXXXXXXXXXXXXX 763
            LEKRKQEDELKKVMQQE+H ERIKEQWKSSTPASKRKDRS +                  
Sbjct: 901  LEKRKQEDELKKVMQQEQHFERIKEQWKSSTPASKRKDRS-LAEDEEGGYSEKRRKGGKR 959

Query: 762  XXXXXXXXXRYETEEAEAXXXXXXXXXXXXDT-SMNYGKHSNQMND-QDDGEDNAQDLLA 589
                      YE EEAEA            D   MN  +  N+MND +D G DNAQDLL 
Sbjct: 960  RKKDKSSKAHYEMEEAEAEMMDDQEEMEDEDARMMNNQEDVNEMNDLEDGGADNAQDLLV 1019

Query: 588  AAGLEDSDAEDDTAVPSYKSRMRRALSESEDDEPLQRQPESSPERENYGEMQESDGEVRG 409
            AAGLEDSDAED+ A  S   R R+A SES+DDEP QRQ ESSP REN  E+ ESD E+R 
Sbjct: 1020 AAGLEDSDAEDEAAPSSTIHRRRQAWSESDDDEPTQRQIESSPNRENSVELPESDREIRE 1079

Query: 408  DDEKVNE 388
            +++K N+
Sbjct: 1080 ENDKTNK 1086


>ref|XP_006342363.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Solanum
            tuberosum]
          Length = 1095

 Score = 1662 bits (4304), Expect = 0.0
 Identities = 859/1091 (78%), Positives = 922/1091 (84%), Gaps = 27/1091 (2%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            MA VYIPVQNSEEEVRV LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGKV+QFR
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVDQFR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRIDMHEPSTWVGKGQLLLAKGD E A  AF I+L+GD DNV A LGQACV F RG+YSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGDVEQAFAAFKIVLDGDRDNVPALLGQACVQFSRGRYSD 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SLELYKRALQVYP CP AVRLGI LCRYKLGQ  KAKQAF RVLQLDPENV+ALVAL IL
Sbjct: 181  SLELYKRALQVYPDCPAAVRLGIGLCRYKLGQLDKAKQAFCRVLQLDPENVDALVALAIL 240

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            DLQ +EASGIRRGMEKMQRAFEIYPYC+++LNYLANHFFFTGQHFLVEQLTETALAVT H
Sbjct: 241  DLQNNEASGIRRGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTTH 300

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GPTKSHSYYNLARSYHSKGDYEKAG+YYMASVKE +KP EF+LPYYGLGQVQLKLGD RS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGMYYMASVKESSKPHEFVLPYYGLGQVQLKLGDLRS 360

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            SL+NFEKVLEV+PE+CE +K L HIY+QLGQ +K QE+++KA KIDPRD +A+LD+GELL
Sbjct: 361  SLANFEKVLEVHPESCEAVKALAHIYVQLGQAEKVQEYLKKATKIDPRDPQAFLDIGELL 420

Query: 2379 ISTDAGAALDAFKTARGLLKKGGE-VPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            IS D  AAL+AFKTAR LLKK  E VPIELLNNIGVL FER EFELA Q+FKEALGD IW
Sbjct: 421  ISNDPAAALEAFKTARNLLKKSNEEVPIELLNNIGVLHFEREEFELATQSFKEALGDGIW 480

Query: 2202 CNFI-----------------NGAPQS-------CAIDASASIHQHKDMQLFHRLEQAGI 2095
              F+                 NG  QS         IDASAS+ Q+KD+QLFHRLE+ G 
Sbjct: 481  MRFLDAKARSDDPTSGGLLYPNGEAQSDLLKSAQYPIDASASVRQYKDLQLFHRLEEQGS 540

Query: 2094 TVELPWNKISTLFNMARLLEQLHDTERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQ 1915
            TVELPWNK+STLFNMARLLEQLHDTE ASI YRLILFKYP+Y DAYLRLA+IAKARNNVQ
Sbjct: 541  TVELPWNKVSTLFNMARLLEQLHDTETASIFYRLILFKYPEYADAYLRLASIAKARNNVQ 600

Query: 1914 LSIELIGDALKVDDKCPNALLMLGDLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGN 1735
            LS ELI DALKV++K P+ALLMLGDLELKNDDWVKAK+TFRAAKDAT G DSYATLCLGN
Sbjct: 601  LSNELISDALKVNEKYPDALLMLGDLELKNDDWVKAKETFRAAKDATDGNDSYATLCLGN 660

Query: 1734 WNYFAAVRSEKRAPKLEATHLEKAKELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKD 1555
            WNYFAA+R+EKRAPKLEATHLEKAKELYTKVL QH ANLYAANGAGVVLAEKGQFD+SKD
Sbjct: 661  WNYFAAIRNEKRAPKLEATHLEKAKELYTKVLFQHNANLYAANGAGVVLAEKGQFDISKD 720

Query: 1554 LFTQVQEAASGNVFVQMPDVWINLAHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYL 1375
            LFTQVQEAASGNVFVQMPDVWINLAHVHFAQGNF LAVKMYQNCLRKFYYNTD+QVLLYL
Sbjct: 721  LFTQVQEAASGNVFVQMPDVWINLAHVHFAQGNFALAVKMYQNCLRKFYYNTDSQVLLYL 780

Query: 1374 ARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTV 1195
            ARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFD GVA+QKFSASTLQKTKRT DEVR+TV
Sbjct: 781  ARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDTGVALQKFSASTLQKTKRTVDEVRATV 840

Query: 1194 AELKNAVRVFSQLSAASNLHFHGFDEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHR 1015
            AELKNAVR+FS LSAASNLH HGFDEKKIETHVGYCKHLLEAAKVHCEAAERE+QQNK R
Sbjct: 841  AELKNAVRLFSLLSAASNLHVHGFDEKKIETHVGYCKHLLEAAKVHCEAAEREDQQNKQR 900

Query: 1014 QKLAREVTMXXXXXXXXXXXXKFQLEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKR 835
             +LAR+VT+            K+QLE+RKQEDELK+VMQQE+HLERIKEQWKSSTPASKR
Sbjct: 901  IELARQVTLAEENRRKAEEQRKYQLERRKQEDELKQVMQQEQHLERIKEQWKSSTPASKR 960

Query: 834  KDRSQIXXXXXXXXXXXXXXXXXXXXXXXXXXXRYETEEAEAXXXXXXXXXXXXDTSMNY 655
            KDR Q                             YE+EEAEA              + NY
Sbjct: 961  KDRPQ--NEDDEGGHGERRRKKGGKRRKRDKKSHYESEEAEAEMDDQEEVDDVDR-NRNY 1017

Query: 654  GKHSNQMNDQDD-GEDNAQDLLAAAGLEDSDAEDDTAVPSYK-SRMRRALSESEDDEPLQ 481
             +  +Q ND DD  E+N QDLLAAAGLEDSDAEDDT  PS   SR R+ALSES++DEPLQ
Sbjct: 1018 EESYDQTNDHDDQAENNPQDLLAAAGLEDSDAEDDTVAPSSNASRRRQALSESDEDEPLQ 1077

Query: 480  RQPESSPEREN 448
            RQ     + EN
Sbjct: 1078 RQGSDGEDGEN 1088


>ref|XP_006451561.1| hypothetical protein CICLE_v10007295mg [Citrus clementina]
            gi|557554787|gb|ESR64801.1| hypothetical protein
            CICLE_v10007295mg [Citrus clementina]
          Length = 1088

 Score = 1662 bits (4304), Expect = 0.0
 Identities = 839/1087 (77%), Positives = 930/1087 (85%), Gaps = 2/1087 (0%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            MACVYIPVQNSEEEVRV LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGKVEQFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGSSPEIDEYYADVRYERIAILNALG YY+YLGKIETKQREKEEHFI+ATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRIDMHEPSTWVGKGQLLLAKG+ E AS+AF I+LE D DNV A LGQACV F RG+YSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SLELYKRALQV+P CPGA+RLGI LCRYKLGQ GKA+QAFQR LQLDPENVEALVAL ++
Sbjct: 181  SLELYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            DLQ +EA+GIR+GMEKMQRAFEIYPYC+++LNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241  DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP EFI PYYGLGQVQLKLGDFRS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            +L+NFEKVLE+YP+NCETLK LGHIY+QLGQ +K QE +RKAAKIDPRDA+A++DLGELL
Sbjct: 361  ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420

Query: 2379 ISTDAGAALDAFKTARGLLKKGG-EVPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            IS+D GAALDAFKTAR LLKK G EVPIE+LNNIGV+ FE+GEFE A Q+FK+ALGD IW
Sbjct: 421  ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480

Query: 2202 CNFINGAPQSCAIDASASIHQHKDMQLFHRLEQAGITVELPWNKISTLFNMARLLEQLHD 2023
               ++   ++  IDASAS+ Q KDMQLFHR E  G  VELPWNK++ LFN+ARLLEQ+HD
Sbjct: 481  LTLLDSKTKTNVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540

Query: 2022 TERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQLSIELIGDALKVDDKCPNALLMLG 1843
            T  AS+LYRLILFK+ DY+DAYLRLAAIAKARNN+QLSIEL+ +ALKV+ K PNAL MLG
Sbjct: 541  TVAASVLYRLILFKHQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600

Query: 1842 DLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGNWNYFAAVRSEKRAPKLEATHLEKA 1663
            DLELKNDDWVKAK+TFRAA DAT G+DSYATL LGNWNYFAA+R+EKRAPKLEATHLEKA
Sbjct: 601  DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA 660

Query: 1662 KELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGNVFVQMPDVWINL 1483
            KELYT+V+VQHT+NLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG+VFVQMPDVWINL
Sbjct: 661  KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 720

Query: 1482 AHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1303
            AHV+FAQGNF LA+KMYQNCLRKFYYNTD Q+LLYLARTHYEAEQWQDCKK+LLRAIHLA
Sbjct: 721  AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 780

Query: 1302 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRVFSQLSAASNLHFHGF 1123
            PSNYTLRFDAGVAMQKFSASTLQKT+RTADEVRSTVAEL+NAVRVFS LSAASNLH HGF
Sbjct: 781  PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGF 840

Query: 1122 DEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHRQKLAREVTMXXXXXXXXXXXXKFQ 943
            DEKKI THV YCKHLL+AAK+H EAAEREEQQN+ RQ+ AR+  +            K+ 
Sbjct: 841  DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYL 900

Query: 942  LEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKRKDRSQIXXXXXXXXXXXXXXXXXX 763
            LEKRK EDE K++ QQEEH +R+KEQW+SSTPASKR++RS+                   
Sbjct: 901  LEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKR 960

Query: 762  XXXXXXXXXRYETEEAEAXXXXXXXXXXXXDTSMNYGKHSNQMNDQDDG-EDNAQDLLAA 586
                      YETE AEA            D SMNY +   QMNDQDD  E+NA D LAA
Sbjct: 961  RKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIGQMNDQDDDVEENANDRLAA 1020

Query: 585  AGLEDSDAEDDTAVPSYKSRMRRALSESEDDEPLQRQPESSPERENYGEMQESDGEVRGD 406
            AGLEDSD +D+ A     +R RRALSES+DDEP +RQ      R+N  E+Q+SDGE+R +
Sbjct: 1021 AGLEDSDVDDEMAPSITAARRRRALSESDDDEPFERQ-----LRDNTDELQDSDGELREN 1075

Query: 405  DEKVNEG 385
            D K N G
Sbjct: 1076 DHKSNGG 1082


>ref|XP_009800504.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Nicotiana
            sylvestris]
          Length = 1095

 Score = 1662 bits (4303), Expect = 0.0
 Identities = 859/1108 (77%), Positives = 926/1108 (83%), Gaps = 27/1108 (2%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            MA VYIPVQNSEEEVRV LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGK++QFR
Sbjct: 1    MASVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRIDMHEPSTWVGKGQLLLAKGD E A  AF I+L+GD DNV A LGQACV F RG+YSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGDIEQAFAAFKIVLDGDRDNVPALLGQACVQFSRGRYSD 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SLELYKRALQVYP CP AVRLGI LCRYKLGQ  KAKQAF+RVL+LDPENVEALVAL IL
Sbjct: 181  SLELYKRALQVYPECPAAVRLGIGLCRYKLGQVEKAKQAFRRVLELDPENVEALVALAIL 240

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            DLQ ++ASGIRRGMEKMQRAFE YPYC+++LNYLANHFFFTGQHFLVEQLTETALAVT H
Sbjct: 241  DLQNNDASGIRRGMEKMQRAFETYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTTH 300

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GPTKSHSYYNLARSYHSKGDYEKAG+YYMASVKE NKP EF+LPYYGLGQVQLKLGD RS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGMYYMASVKESNKPHEFVLPYYGLGQVQLKLGDLRS 360

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            S +NFEKVLEVYPE+ ET+K L HIY+QLGQT+K QE+++KA KIDPRD +A+LD+GELL
Sbjct: 361  SQANFEKVLEVYPESYETVKALAHIYVQLGQTEKAQEYLKKATKIDPRDPQAFLDIGELL 420

Query: 2379 ISTDAGAALDAFKTARGLLKKGGE-VPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            IS D  AAL+AFKTAR LLKK  E VPIELLNNIGVL FERGEFELA Q+FKEALGD IW
Sbjct: 421  ISNDPAAALEAFKTARNLLKKSNEEVPIELLNNIGVLHFERGEFELAAQSFKEALGDGIW 480

Query: 2202 CNFINGAPQS------------------------CAIDASASIHQHKDMQLFHRLEQAGI 2095
              F++   QS                          I+AS S+ Q+KD QLFHRLE+ GI
Sbjct: 481  LKFLDAKGQSDDPTSEGHLYSNGEARSDMFKSAQYPINASESVQQYKDFQLFHRLEEQGI 540

Query: 2094 TVELPWNKISTLFNMARLLEQLHDTERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQ 1915
            +VELPWNK+STLFNMARLLEQLHDTE ASI YRLILFKYP Y+DAYLRLAAIAKARNNVQ
Sbjct: 541  SVELPWNKVSTLFNMARLLEQLHDTETASIFYRLILFKYPGYVDAYLRLAAIAKARNNVQ 600

Query: 1914 LSIELIGDALKVDDKCPNALLMLGDLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGN 1735
            LSIELIGDALKVD+KCP+ALLMLGDLELKNDDWVKAK+TFRAAKDAT G DSYATLCLGN
Sbjct: 601  LSIELIGDALKVDEKCPDALLMLGDLELKNDDWVKAKETFRAAKDATDGNDSYATLCLGN 660

Query: 1734 WNYFAAVRSEKRAPKLEATHLEKAKELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKD 1555
            WNYFAA+R+EKRAPKLEATHLEKAKELYTKVL QH ANLYAANGAGVVLAEKGQFD+SKD
Sbjct: 661  WNYFAAIRNEKRAPKLEATHLEKAKELYTKVLFQHNANLYAANGAGVVLAEKGQFDISKD 720

Query: 1554 LFTQVQEAASGNVFVQMPDVWINLAHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYL 1375
            LFTQVQEAASGNVFVQMPDVWINLAHVHFAQGNF LAVKMY+NCLRKFY+NTD+QVLLYL
Sbjct: 721  LFTQVQEAASGNVFVQMPDVWINLAHVHFAQGNFALAVKMYENCLRKFYHNTDSQVLLYL 780

Query: 1374 ARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTV 1195
            ARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFD+GVA+QKFSASTLQKTKRT DEVR+TV
Sbjct: 781  ARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDSGVALQKFSASTLQKTKRTVDEVRATV 840

Query: 1194 AELKNAVRVFSQLSAASNLHFHGFDEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHR 1015
            AELKNAVR+FS LSAASNLH HGFDEKKIETHVGYCKHLLEAAKVHCEAAERE+QQNK R
Sbjct: 841  AELKNAVRLFSLLSAASNLHVHGFDEKKIETHVGYCKHLLEAAKVHCEAAEREDQQNKQR 900

Query: 1014 QKLAREVTMXXXXXXXXXXXXKFQLEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKR 835
             +LAR+V +            K+QLE+RKQEDELK+VMQQE+HLERIKEQWKSSTPASKR
Sbjct: 901  LELARQVILAEENRRKAEEQRKYQLERRKQEDELKQVMQQEQHLERIKEQWKSSTPASKR 960

Query: 834  KDRSQIXXXXXXXXXXXXXXXXXXXXXXXXXXXRYETEEAEAXXXXXXXXXXXXDTSMNY 655
            KDR Q                             YE+EEAEA                NY
Sbjct: 961  KDRPQTEDDEGGHGEKRRKKGGKRRKRDKKSH--YESEEAEAEMDDQEEMDDGDR-HRNY 1017

Query: 654  GKHSNQMNDQDD-GEDNAQDLLAAAGLEDSDAEDDTAVPSYK-SRMRRALSESEDDEPLQ 481
             +     ND D+  EDN QDLLAAAGLEDSDAEDDTA PS   SR R+ALSES++DEPL 
Sbjct: 1018 EEPYYPTNDHDEQAEDNPQDLLAAAGLEDSDAEDDTAAPSANASRRRQALSESDEDEPLP 1077

Query: 480  RQPESSPERENYGEMQESDGEVRGDDEK 397
            RQ          G   E  G+   DD++
Sbjct: 1078 RQ----------GSDGEGGGDATVDDDE 1095


>ref|XP_006490821.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Citrus
            sinensis]
          Length = 1088

 Score = 1660 bits (4300), Expect = 0.0
 Identities = 838/1087 (77%), Positives = 929/1087 (85%), Gaps = 2/1087 (0%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            MACVYIPVQNSEEEVRV LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGKVEQFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGSSPEIDEYYADVRYERIAILNALG YY+YLGKIETKQREKEEHFI+ATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRIDMHEPSTWVGKGQLLLAKG+ E AS+AF I+LE D DNV A LGQACV F RG+YSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SLE YKRALQV+P CPGA+RLGI LCRYKLGQ GKA+QAFQR LQLDPENVEALVAL ++
Sbjct: 181  SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            DLQ +EA+GIR+GMEKMQRAFEIYPYC+++LNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241  DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP EFI PYYGLGQVQLKLGDFRS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            +L+NFEKVLE+YP+NCETLK LGHIY+QLGQ +K QE +RKAAKIDPRDA+A++DLGELL
Sbjct: 361  ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420

Query: 2379 ISTDAGAALDAFKTARGLLKKGG-EVPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            IS+D GAALDAFKTAR LLKK G EVPIE+LNNIGV+ FE+GEFE A Q+FK+ALGD IW
Sbjct: 421  ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480

Query: 2202 CNFINGAPQSCAIDASASIHQHKDMQLFHRLEQAGITVELPWNKISTLFNMARLLEQLHD 2023
               ++   ++  IDASAS+ Q KDMQLFHR E  G  VELPWNK++ LFN+ARLLEQ+HD
Sbjct: 481  LTLLDSKTKTNVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540

Query: 2022 TERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQLSIELIGDALKVDDKCPNALLMLG 1843
            T  AS+LYRLILFK+ DY+DAYLRLAAIAKARNN+QLSIEL+ +ALKV+ K PNAL MLG
Sbjct: 541  TVAASVLYRLILFKHQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600

Query: 1842 DLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGNWNYFAAVRSEKRAPKLEATHLEKA 1663
            DLELKNDDWVKAK+TFRAA DAT G+DSYATL LGNWNYFAA+R+EKRAPKLEATHLEKA
Sbjct: 601  DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA 660

Query: 1662 KELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGNVFVQMPDVWINL 1483
            KELYT+V+VQHT+NLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG+VFVQMPDVWINL
Sbjct: 661  KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 720

Query: 1482 AHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1303
            AHV+FAQGNF LA+KMYQNCLRKFYYNTD Q+LLYLARTHYEAEQWQDCKK+LLRAIHLA
Sbjct: 721  AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 780

Query: 1302 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRVFSQLSAASNLHFHGF 1123
            PSNYTLRFDAGVAMQKFSASTLQKT+RTADEVRSTVAEL+NAVRVFS LSAASNLH HGF
Sbjct: 781  PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGF 840

Query: 1122 DEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHRQKLAREVTMXXXXXXXXXXXXKFQ 943
            DEKKI THV YCKHLL+AAK+H EAAEREEQQN+ RQ+ AR+  +            K+ 
Sbjct: 841  DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYL 900

Query: 942  LEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKRKDRSQIXXXXXXXXXXXXXXXXXX 763
            LEKRK EDE K++ QQEEH +R+KEQW+SSTPASKR++RS+                   
Sbjct: 901  LEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKR 960

Query: 762  XXXXXXXXXRYETEEAEAXXXXXXXXXXXXDTSMNYGKHSNQMNDQDDG-EDNAQDLLAA 586
                      YETE AEA            D SMNY +   QMNDQDD  E+NA D LAA
Sbjct: 961  RKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIGQMNDQDDDVEENANDRLAA 1020

Query: 585  AGLEDSDAEDDTAVPSYKSRMRRALSESEDDEPLQRQPESSPERENYGEMQESDGEVRGD 406
            AGLEDSD +D+ A     +R RRALSES+DDEP +RQ      R+N  E+Q+SDGE+R +
Sbjct: 1021 AGLEDSDVDDEMAPSITAARRRRALSESDDDEPFERQ-----LRDNTDELQDSDGELREN 1075

Query: 405  DEKVNEG 385
            D K N G
Sbjct: 1076 DHKSNGG 1082


>ref|XP_009596804.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Nicotiana
            tomentosiformis]
          Length = 1095

 Score = 1657 bits (4291), Expect = 0.0
 Identities = 852/1091 (78%), Positives = 922/1091 (84%), Gaps = 27/1091 (2%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            MA VYIPVQNSEEEVRV LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGK++QFR
Sbjct: 1    MASVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRIDMHEP+TWVGKGQLLLAKGD E A  AF I+L+GD DNV A LGQACV F RG+YSD
Sbjct: 121  SRIDMHEPTTWVGKGQLLLAKGDIEQAFAAFKIVLDGDRDNVPALLGQACVQFSRGRYSD 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SLELYKRALQVYP+CP AVRLGI LCRYKLGQ  KAKQAF+RVL+LDPENVEALVAL IL
Sbjct: 181  SLELYKRALQVYPKCPAAVRLGIGLCRYKLGQVEKAKQAFRRVLELDPENVEALVALAIL 240

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            DLQ ++ASGIRRGMEKMQRAFE YPYC+++LNYLANHFFFTGQHFLVEQLTETALAVT H
Sbjct: 241  DLQNNDASGIRRGMEKMQRAFETYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTTH 300

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GPTKSHSYYNLARSYHSKGDYEKAG+YYMASVKE NKP EF+LPYYGLGQVQLKLGD RS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGMYYMASVKESNKPHEFVLPYYGLGQVQLKLGDLRS 360

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            S +NFEKVLEVYPE+ ET+K L HIY+QLGQT+K QE+++KA KIDPRD +A+LD+GELL
Sbjct: 361  SQANFEKVLEVYPESYETVKALAHIYVQLGQTEKAQEYLKKATKIDPRDPQAFLDIGELL 420

Query: 2379 ISTDAGAALDAFKTARGLLKKGGE-VPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            IS D  AAL+AFKTAR LLKK  E VPIELLNNIGVL FERGEFELA Q+FKEALGD IW
Sbjct: 421  ISNDPAAALEAFKTARNLLKKSNEEVPIELLNNIGVLHFERGEFELATQSFKEALGDGIW 480

Query: 2202 CNFINGAPQS------------------------CAIDASASIHQHKDMQLFHRLEQAGI 2095
              F++   +S                          I+AS S+ Q+KD QLFHRLE+ GI
Sbjct: 481  LKFLDAKGESDDPISEGHLYSNGEARSDMFKSAQYPINASESVQQYKDFQLFHRLEEQGI 540

Query: 2094 TVELPWNKISTLFNMARLLEQLHDTERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQ 1915
            +VELPWNK+STLFNMARLLEQLHDTE ASI YRLILFKYP Y+DAYLRLAAIAKARNNVQ
Sbjct: 541  SVELPWNKVSTLFNMARLLEQLHDTETASIFYRLILFKYPGYVDAYLRLAAIAKARNNVQ 600

Query: 1914 LSIELIGDALKVDDKCPNALLMLGDLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGN 1735
            LSIELIGDALKVD+KCP+ALLMLGDLELKNDDWVKAK+TFRAAKDAT G DSYATLCLGN
Sbjct: 601  LSIELIGDALKVDEKCPDALLMLGDLELKNDDWVKAKETFRAAKDATDGNDSYATLCLGN 660

Query: 1734 WNYFAAVRSEKRAPKLEATHLEKAKELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKD 1555
            WNYFAA+R+EKRAPKLEATHLEKAKELYTKVL QH ANLYAANGAGVVLAEKGQFD+SKD
Sbjct: 661  WNYFAAIRNEKRAPKLEATHLEKAKELYTKVLFQHNANLYAANGAGVVLAEKGQFDISKD 720

Query: 1554 LFTQVQEAASGNVFVQMPDVWINLAHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYL 1375
            LFTQVQEAASGNVFVQMPDVWINLAHVHFAQGNF+LAVKMY+NCLRKFY+NTD+QVLLYL
Sbjct: 721  LFTQVQEAASGNVFVQMPDVWINLAHVHFAQGNFSLAVKMYENCLRKFYHNTDSQVLLYL 780

Query: 1374 ARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTV 1195
            ARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFD+GVA+QKFSASTLQKTKRT DEVR+TV
Sbjct: 781  ARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDSGVALQKFSASTLQKTKRTVDEVRATV 840

Query: 1194 AELKNAVRVFSQLSAASNLHFHGFDEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHR 1015
            AELKNAVR+FS LSAASNLH HGFDEKKIETHVGYCKHLLEAAKVHCEAAERE+QQNK R
Sbjct: 841  AELKNAVRLFSLLSAASNLHVHGFDEKKIETHVGYCKHLLEAAKVHCEAAEREDQQNKQR 900

Query: 1014 QKLAREVTMXXXXXXXXXXXXKFQLEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKR 835
             +LAR+V +            K+QLE+RKQEDELK+VMQQE+HLERIKEQWKSSTPASKR
Sbjct: 901  LELARQVILAEENRRKAEEQRKYQLERRKQEDELKQVMQQEQHLERIKEQWKSSTPASKR 960

Query: 834  KDRSQIXXXXXXXXXXXXXXXXXXXXXXXXXXXRYETEEAEAXXXXXXXXXXXXDTSMNY 655
            KDR Q                             YE+EEAEA                NY
Sbjct: 961  KDRPQTEDDEGGHGEKRRKKGGKRRKRDKKSH--YESEEAEAEMDDQEEMDDGDL-HRNY 1017

Query: 654  GKHSNQMNDQDD-GEDNAQDLLAAAGLEDSDAEDDTAVPSYK-SRMRRALSESEDDEPLQ 481
             +      D DD  EDN Q+LLAAAGLEDSDAEDDTA PS   SR R+ALSES++DEPL+
Sbjct: 1018 EEPYYPTIDHDDQAEDNPQELLAAAGLEDSDAEDDTAAPSANASRRRQALSESDEDEPLR 1077

Query: 480  RQPESSPEREN 448
            RQ       +N
Sbjct: 1078 RQGSDGEGGDN 1088


>ref|XP_004243718.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Solanum
            lycopersicum]
          Length = 1095

 Score = 1656 bits (4288), Expect = 0.0
 Identities = 858/1091 (78%), Positives = 922/1091 (84%), Gaps = 27/1091 (2%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            MA VYIPVQNSEEEVRV LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGKV+QFR
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVDQFR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRIDMHEPSTWVGKGQLLLAKGD E A  AF I+L+GD DNV A LGQACV F RG+YSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGDIEQAFAAFKIVLDGDRDNVPALLGQACVQFSRGRYSD 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SLELYKRALQVYP CP AVRLGI LCRYKLGQ+ KAKQAF RVLQLDPENV+ALVAL IL
Sbjct: 181  SLELYKRALQVYPDCPAAVRLGIGLCRYKLGQFDKAKQAFCRVLQLDPENVDALVALAIL 240

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            DLQ +EASGIRRGMEKMQRAFEIYPYC+++LNYLANHFFFTGQHFLVEQLTETALAVT H
Sbjct: 241  DLQNNEASGIRRGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTTH 300

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GPTKSHSYYNLARSYHSKGDYEKAG+YYMASVKE +KP +F+LPYYGLGQVQLKLGD RS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGMYYMASVKESSKPHDFVLPYYGLGQVQLKLGDLRS 360

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            SL+NFEKVLEV+PE+CE +K L HIY+QLGQ +K QE+++KA KIDPRD +A+LD+GELL
Sbjct: 361  SLANFEKVLEVHPESCEAVKALAHIYVQLGQAEKVQEYLKKATKIDPRDPQAFLDIGELL 420

Query: 2379 ISTDAGAALDAFKTARGLLKKGGE-VPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            IS D  AAL+AFKTAR LLKK  E VPIELLNNIGVL FER EFELA Q+FKEALGD IW
Sbjct: 421  ISNDPAAALEAFKTARNLLKKSNEEVPIELLNNIGVLHFEREEFELATQSFKEALGDGIW 480

Query: 2202 CNFI-----------------NGAPQS-------CAIDASASIHQHKDMQLFHRLEQAGI 2095
              F+                 NG  QS         IDASAS+ Q+KD QLF RLE+ GI
Sbjct: 481  IRFLDAKARSNDPTSGGLLYGNGETQSDLLKSAQYPIDASASVRQYKDFQLFDRLEEQGI 540

Query: 2094 TVELPWNKISTLFNMARLLEQLHDTERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQ 1915
            TVELPWNK+STLFNMARLLEQLHDTE ASI YR ILFKYP+Y DAYLRLA+IAKARNNVQ
Sbjct: 541  TVELPWNKVSTLFNMARLLEQLHDTETASIFYRHILFKYPEYADAYLRLASIAKARNNVQ 600

Query: 1914 LSIELIGDALKVDDKCPNALLMLGDLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGN 1735
            LS ELI DALKV++K P+ALLMLGDLELKNDDWVKAK+TFRAAKDAT G DSYATLCLGN
Sbjct: 601  LSNELISDALKVNEKYPDALLMLGDLELKNDDWVKAKETFRAAKDATDGNDSYATLCLGN 660

Query: 1734 WNYFAAVRSEKRAPKLEATHLEKAKELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKD 1555
            WNYFAA+R+EKRAPKLEATHLEKAKELYTKVL QH ANLYAANGAGVVLAEKGQFD+SKD
Sbjct: 661  WNYFAAIRNEKRAPKLEATHLEKAKELYTKVLFQHNANLYAANGAGVVLAEKGQFDISKD 720

Query: 1554 LFTQVQEAASGNVFVQMPDVWINLAHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYL 1375
            LFTQVQEAASGNVFVQMPDVWINLAHVHFAQGNF LAVKMYQNCLRKFY+NTD+QVLLYL
Sbjct: 721  LFTQVQEAASGNVFVQMPDVWINLAHVHFAQGNFALAVKMYQNCLRKFYHNTDSQVLLYL 780

Query: 1374 ARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTV 1195
            ARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFD GVA+QKFSASTLQKTKRT DEVR+TV
Sbjct: 781  ARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDTGVALQKFSASTLQKTKRTVDEVRATV 840

Query: 1194 AELKNAVRVFSQLSAASNLHFHGFDEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHR 1015
            AELKNAVR+FS LSAASNLH HGFDEKKIETHVGYCKHLLEAAKVHCEAAERE+QQNK R
Sbjct: 841  AELKNAVRLFSLLSAASNLHVHGFDEKKIETHVGYCKHLLEAAKVHCEAAEREDQQNKQR 900

Query: 1014 QKLAREVTMXXXXXXXXXXXXKFQLEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKR 835
             +LAR+VT+            K+QLE+RKQEDELK+VMQQE+HLERIKEQWKSSTPASKR
Sbjct: 901  IELARQVTLAEENRRKAEEQRKYQLERRKQEDELKQVMQQEQHLERIKEQWKSSTPASKR 960

Query: 834  KDRSQIXXXXXXXXXXXXXXXXXXXXXXXXXXXRYETEEAEAXXXXXXXXXXXXDTSMNY 655
            KDR Q                             YE EEAEA            D + NY
Sbjct: 961  KDRPQ--NEDDEGGHGERRRKKGGKRRKRDKKSHYEYEEAEA-EMDDQEEMDDVDRNRNY 1017

Query: 654  GKHSNQMNDQDD-GEDNAQDLLAAAGLEDSDAEDDTAVPSYK-SRMRRALSESEDDEPLQ 481
             +  +Q ND DD  E+N QDLLAAAGLEDSDAEDDT VPS   SR R+ALSES++DEPLQ
Sbjct: 1018 EESYDQTNDHDDQAENNPQDLLAAAGLEDSDAEDDTVVPSSNASRRRQALSESDEDEPLQ 1077

Query: 480  RQPESSPEREN 448
            RQ     + EN
Sbjct: 1078 RQGSDGEDGEN 1088


>ref|XP_007012670.1| Binding isoform 1 [Theobroma cacao] gi|508783033|gb|EOY30289.1|
            Binding isoform 1 [Theobroma cacao]
          Length = 1094

 Score = 1654 bits (4284), Expect = 0.0
 Identities = 834/1089 (76%), Positives = 929/1089 (85%), Gaps = 4/1089 (0%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            MACVYIPVQNSEEEVRV LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGK+EQFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFI+ATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRIDMHEPSTWVGKGQLLLAKG+ E A  AF I+LEGD DNV A LGQACV F R +YSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQAFAAFKIVLEGDRDNVPALLGQACVEFNRSRYSD 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SLELYKRALQV+P CPGAVRLGI LCRYKLGQ+ KA+ AFQRVLQLD ENVEALVAL I+
Sbjct: 181  SLELYKRALQVFPNCPGAVRLGIGLCRYKLGQFEKARLAFQRVLQLDSENVEALVALAIM 240

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            DLQ +EASGI++GM+KM+RAFEIYPYC+++LNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241  DLQANEASGIQKGMDKMRRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GPTKSHSYYNLARSYHSKGDYEKAG YYMAS+KEINKP EF+ PYYGLGQV+LK GDFRS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGFYYMASIKEINKPHEFVFPYYGLGQVKLKSGDFRS 360

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            +LSNFEKVLEVYP+NCETLK LGHIY+QLGQ +K QEF+RKA KIDPRDA+A+LDLGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQVEKAQEFMRKAIKIDPRDAQAFLDLGELL 420

Query: 2379 ISTDAGAALDAFKTARGLLKKGGE-VPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            IS+D GAALDAFKTAR L++KGG+ VPIE+LNNIGVL FER EFELA ++  +ALGD IW
Sbjct: 421  ISSDTGAALDAFKTARSLMEKGGQAVPIEVLNNIGVLHFEREEFELALESLNKALGDGIW 480

Query: 2202 CNFINGAPQSCAIDASASIHQHKDMQLFHRLEQAGITVELPWNKISTLFNMARLLEQLHD 2023
                   P+S  I+ASASI  +KDMQLFHRLE+ G+ VELPWNK++ +FN+ARL EQLH+
Sbjct: 481  LILTGNKPKSYVIEASASILDYKDMQLFHRLEEDGLPVELPWNKVTVVFNLARLHEQLHN 540

Query: 2022 TERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQLSIELIGDALKVDDKCPNALLMLG 1843
            T  A+ILY LILFKYPDY+DAYLRLAAIAKAR+N+QLSIEL+ +ALKV+DKCPNAL MLG
Sbjct: 541  TGTANILYHLILFKYPDYVDAYLRLAAIAKARSNLQLSIELVNEALKVNDKCPNALSMLG 600

Query: 1842 DLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGNWNYFAAVRSEKRAPKLEATHLEKA 1663
            DLELKNDDWVKAK+TFR+A DAT G+DSYA L LGNWNYFAA+R+EKRAPKLEATHLEKA
Sbjct: 601  DLELKNDDWVKAKETFRSASDATDGKDSYAILSLGNWNYFAAIRNEKRAPKLEATHLEKA 660

Query: 1662 KELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGNVFVQMPDVWINL 1483
            KELYT+VLVQHTANLYAANGAGVVLAEKG FDVSKD+FTQVQEAASG+VFVQMPDVWINL
Sbjct: 661  KELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 720

Query: 1482 AHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1303
            AHV FAQGNF LAVKMYQNCLRKFYYNTD+Q+LLYLARTHYEAEQWQ+CKKTLLRAIHLA
Sbjct: 721  AHVFFAQGNFALAVKMYQNCLRKFYYNTDSQILLYLARTHYEAEQWQECKKTLLRAIHLA 780

Query: 1302 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRVFSQLSAASNLHFHGF 1123
            PSNYTLRFDAGVAMQKFS STLQK KRTADEVRSTVAEL+NAVR+FSQLSAASNLH HGF
Sbjct: 781  PSNYTLRFDAGVAMQKFSTSTLQKEKRTADEVRSTVAELENAVRIFSQLSAASNLHLHGF 840

Query: 1122 DEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHRQKLAREVTMXXXXXXXXXXXXKFQ 943
            DEKKI THV YCKHLL AAKVH EAAEREEQQN+ +Q+ AR++ +            K+ 
Sbjct: 841  DEKKINTHVEYCKHLLVAAKVHREAAEREEQQNRQKQEAARQLALAEEARRKAEEQRKYL 900

Query: 942  LEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKRKDRSQIXXXXXXXXXXXXXXXXXX 763
            LE+RKQEDE K++ Q EEH +R++EQWKSSTPASKR++RS++                  
Sbjct: 901  LERRKQEDEQKRLQQAEEHFKRVQEQWKSSTPASKRRERSEVDDEDGGHSEKRRKGGKRR 960

Query: 762  XXXXXXXXXRYETEEAEAXXXXXXXXXXXXDTSMNYGKHSNQMNDQDDGE-DNAQDLLAA 586
                      YE ++ E             D +MNY + + QMNDQDD   +NAQDLLAA
Sbjct: 961  KKDKNKSR--YERDDEEPYMMDDREELGDEDANMNYEESTTQMNDQDDDNGENAQDLLAA 1018

Query: 585  AGLEDSDAEDDTAVP--SYKSRMRRALSESEDDEPLQRQPESSPERENYGEMQESDGEVR 412
            AGLEDSD ED+ A    S   R RRA SES+DDEPL R  ESSP REN  E+QESDGE+R
Sbjct: 1019 AGLEDSDVEDEAAAAPSSAAGRRRRAWSESDDDEPLHRGTESSPVRENSAELQESDGEIR 1078

Query: 411  GDDEKVNEG 385
             D+ K+N G
Sbjct: 1079 EDNSKLNGG 1087


>ref|XP_012480641.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Gossypium
            raimondii] gi|763739811|gb|KJB07310.1| hypothetical
            protein B456_001G015300 [Gossypium raimondii]
          Length = 1096

 Score = 1640 bits (4248), Expect = 0.0
 Identities = 823/1089 (75%), Positives = 927/1089 (85%), Gaps = 4/1089 (0%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            MACVYIPVQNSEEEVRV LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGKVEQFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIET+QREKEEHFI+ATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETRQREKEEHFILATQYYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRIDMHEPSTWVGKGQLLLAKG+ E A +AF I+LEGD DNV A LGQACV F RG+Y+D
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQAFSAFKIVLEGDRDNVPALLGQACVEFNRGRYAD 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SLELYKRALQVYP CPGAVRLGI LCRYKLGQ+ KA+QAFQRVL+LD ENVEALVAL I+
Sbjct: 181  SLELYKRALQVYPNCPGAVRLGIGLCRYKLGQFQKARQAFQRVLELDLENVEALVALAIM 240

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            DLQ ++A+GI++GM+KM+RAFEIYPYC+++LNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241  DLQANDAAGIQKGMDKMRRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GPTKSHS+YNLARSYHSKGD+EKAG YYMAS+KEINKPQEF+ PYYGLGQV+LK GDFR+
Sbjct: 301  GPTKSHSFYNLARSYHSKGDFEKAGFYYMASIKEINKPQEFVFPYYGLGQVKLKSGDFRT 360

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            +LSNFEKVLEVYP+NCETLK LGHIY+QLGQ  K QEF+RKA KIDPRDA+A+LDL ELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQVDKAQEFMRKATKIDPRDAQAFLDLAELL 420

Query: 2379 ISTDAGAALDAFKTARGLLKKGGE-VPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            IS+D GAALDAFKTAR LL+KGG+ VP+E+LNNIGVL FER E ELA ++F +ALGD +W
Sbjct: 421  ISSDTGAALDAFKTARNLLEKGGQAVPVEVLNNIGVLHFEREELELALESFNKALGDGVW 480

Query: 2202 CNFINGAPQSCAIDASASIHQHKDMQLFHRLEQAGITVELPWNKISTLFNMARLLEQLHD 2023
                   P+   I+ASASI  +KDMQ+FHRLE+ G+ VELPWNK++ +FN+ARL EQLH+
Sbjct: 481  LALTGNKPKPYVIEASASILDYKDMQVFHRLEEDGLAVELPWNKVTVVFNLARLHEQLHN 540

Query: 2022 TERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQLSIELIGDALKVDDKCPNALLMLG 1843
            T  A+ILYRLILFKYPDYIDAYLRLAAIAKARNN+QLSIEL+ +ALKV+DKCPNAL MLG
Sbjct: 541  TGIANILYRLILFKYPDYIDAYLRLAAIAKARNNLQLSIELVNEALKVNDKCPNALSMLG 600

Query: 1842 DLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGNWNYFAAVRSEKRAPKLEATHLEKA 1663
            DLELKNDDWVKAK+T R+A DAT G+DSYA L LGNWNYFAA+R+EKR PKLEATHLEKA
Sbjct: 601  DLELKNDDWVKAKETLRSASDATDGKDSYAILSLGNWNYFAAIRNEKRNPKLEATHLEKA 660

Query: 1662 KELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGNVFVQMPDVWINL 1483
            KELYT+VLVQHT NLYAANGA VVLAEKGQFDVSKD+FTQVQE ASG+VFVQMPDVWINL
Sbjct: 661  KELYTRVLVQHTDNLYAANGAAVVLAEKGQFDVSKDIFTQVQEGASGSVFVQMPDVWINL 720

Query: 1482 AHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1303
            AH+ FAQGNF LAVKMYQNCLRKFYYNTD+Q+LLYLARTHYEAEQWQ+CKKTLLRAIHLA
Sbjct: 721  AHIFFAQGNFALAVKMYQNCLRKFYYNTDSQILLYLARTHYEAEQWQECKKTLLRAIHLA 780

Query: 1302 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRVFSQLSAASNLHFHGF 1123
            PSNYTLRFDAGVAMQKFS STLQK KRTADEVRSTVAEL+NAVR+FSQLSAASNLH HGF
Sbjct: 781  PSNYTLRFDAGVAMQKFSTSTLQKEKRTADEVRSTVAELENAVRIFSQLSAASNLHLHGF 840

Query: 1122 DEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHRQKLAREVTMXXXXXXXXXXXXKFQ 943
            DEKKI THV YCKHLLEAAKVH EAAEREEQQN+ +Q+ AR++ +            K+ 
Sbjct: 841  DEKKINTHVEYCKHLLEAAKVHREAAEREEQQNRQKQEAARQLALAEEARRKAEEQRKYL 900

Query: 942  LEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKRKDRSQIXXXXXXXXXXXXXXXXXX 763
            LE+RKQEDE K++ Q EEH +R++EQWKSS P S+R++RS+I                  
Sbjct: 901  LERRKQEDEQKRLQQAEEHFKRVQEQWKSSNPGSRRRERSEIDDEEGGHSEKRRRKGGKR 960

Query: 762  XXXXXXXXXRYETEEAEAXXXXXXXXXXXXDTSMNYGKHSNQMNDQDDGE-DNAQDLLAA 586
                      YE ++ E             D + NY + + +MNDQDD   +NAQDLLAA
Sbjct: 961  RKKDKNKSR-YERDDEEPDMMDDREEMEDEDANRNYRESTTRMNDQDDDNGENAQDLLAA 1019

Query: 585  AGLEDSDAEDDTAVP--SYKSRMRRALSESEDDEPLQRQPESSPERENYGEMQESDGEVR 412
            AGLEDSD ED+TA    S   R RRA SES+DDEP+QR+PESSP R N  E+QESDGE+R
Sbjct: 1020 AGLEDSDMEDETAAAPSSGAGRRRRAWSESDDDEPVQRRPESSPVRGNSAELQESDGEIR 1079

Query: 411  GDDEKVNEG 385
             D+ K N G
Sbjct: 1080 EDNRKANGG 1088


>ref|XP_010047494.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Eucalyptus
            grandis] gi|629114751|gb|KCW79426.1| hypothetical protein
            EUGRSUZ_C00824 [Eucalyptus grandis]
          Length = 1088

 Score = 1633 bits (4229), Expect = 0.0
 Identities = 817/1085 (75%), Positives = 926/1085 (85%), Gaps = 2/1085 (0%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            MA VYIPVQNSEEEVRV LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGK++QFR
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFI+ATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRIDMHEPSTWVGKGQLLL KG+ E A  AF I+L+GD DNV A LGQACV F RG+YSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLGKGEIEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SLELYKRAL V+P CPGAVRLGI LCRYKLGQ+ KA+QAF RVLQLDPENVEALVAL I+
Sbjct: 181  SLELYKRALIVHPDCPGAVRLGIGLCRYKLGQFEKARQAFLRVLQLDPENVEALVALAIM 240

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            D++T++  GIRRG+EKM RAFEIYPYC+++LNYLANHFFFTGQHFLVEQLTETALAVT H
Sbjct: 241  DMRTNKVGGIRRGVEKMHRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTTH 300

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP  FI PYYGLGQVQLKLGDFRS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHAFIFPYYGLGQVQLKLGDFRS 360

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            SLSNFEKVLEVYP+NCETL+ LGHIY+QLGQ +KGQEF+RKA K+DPRDA+A+LDLGELL
Sbjct: 361  SLSNFEKVLEVYPDNCETLRVLGHIYVQLGQVEKGQEFMRKATKVDPRDAQAFLDLGELL 420

Query: 2379 ISTDAGAALDAFKTARGLLKKGG-EVPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            IS+D GAALDAFKTAR LLKKGG EVP+ELLNNIGV+ FERGE ELA+Q+ KEA+GD IW
Sbjct: 421  ISSDTGAALDAFKTARSLLKKGGQEVPVELLNNIGVIHFERGELELAEQSLKEAVGDGIW 480

Query: 2202 CNFINGAPQSCAIDASASIHQHKDMQLFHRLEQAGITVELPWNKISTLFNMARLLEQLHD 2023
             +FI G       DA+A    +KDMQ+F +LE   + +ELPWNK++ LFN+ARLLEQLH 
Sbjct: 481  RSFIEGKVNVSTADATACTRLYKDMQIFTQLEADNVNLELPWNKVTALFNLARLLEQLHR 540

Query: 2022 TERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQLSIELIGDALKVDDKCPNALLMLG 1843
             E ASILYRLI++KYPDYIDAYLRLAAI+KA+NN+QLSIEL+ DALKV++KCPNAL MLG
Sbjct: 541  MEIASILYRLIIYKYPDYIDAYLRLAAISKAQNNIQLSIELVNDALKVNEKCPNALSMLG 600

Query: 1842 DLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGNWNYFAAVRSEKRAPKLEATHLEKA 1663
            +LELKNDDWVKAK+TFRAA +A  G+DSY+TL LGNWNYFAA+R+EKRAPKLEATHLEKA
Sbjct: 601  ELELKNDDWVKAKETFRAASEAADGKDSYSTLSLGNWNYFAAMRNEKRAPKLEATHLEKA 660

Query: 1662 KELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGNVFVQMPDVWINL 1483
            KELYTKVLVQH +NLYAANGAGVVLAEKGQFDVSKD+FTQVQEAASG++F+Q+PDVW+N+
Sbjct: 661  KELYTKVLVQHNSNLYAANGAGVVLAEKGQFDVSKDIFTQVQEAASGSIFIQLPDVWVNI 720

Query: 1482 AHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1303
            AHV+FAQGNF LAVKMYQNCLRKFY+NTD+ +LLY+ARTHYEAEQWQDCKKTLLRAIHL+
Sbjct: 721  AHVYFAQGNFALAVKMYQNCLRKFYHNTDSHILLYMARTHYEAEQWQDCKKTLLRAIHLS 780

Query: 1302 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRVFSQLSAASNLHFHGF 1123
            P+NY LRFDAGVAMQKFSASTLQK KRTADEVRS VAEL+NAVRVFSQ++A +NLH+HGF
Sbjct: 781  PANYVLRFDAGVAMQKFSASTLQKQKRTADEVRSAVAELQNAVRVFSQMAAGANLHYHGF 840

Query: 1122 DEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHRQKLAREVTMXXXXXXXXXXXXKFQ 943
            DEKKI+THVGYCKHLLEAAKVHCE A+REE+Q + R +LAR++ +            K Q
Sbjct: 841  DEKKIDTHVGYCKHLLEAAKVHCEVAQREEEQARQRLELARQLALAEEARRKAEEQRKKQ 900

Query: 942  LEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKRKDRSQIXXXXXXXXXXXXXXXXXX 763
            LEKRK EDE K+V QQEEH  R+KEQWKSS PASKR++RS                    
Sbjct: 901  LEKRKLEDEQKRVQQQEEHFRRVKEQWKSSMPASKRRERSDADDEEGGHSEKRRRKGGKR 960

Query: 762  XXXXXXXXXRYETEEAEAXXXXXXXXXXXXDTSMNYGKHSNQMNDQDD-GEDNAQDLLAA 586
                     +YETEEAEA            D  +NYG+ ++Q++DQDD  E+NAQ +LAA
Sbjct: 961  RKKERSSKSQYETEEAEA----EIDDQEDEDAHLNYGEPADQIHDQDDEAEENAQGVLAA 1016

Query: 585  AGLEDSDAEDDTAVPSYKSRMRRALSESEDDEPLQRQPESSPERENYGEMQESDGEVRGD 406
            AGLEDSDAED+   P   SR R+A SES+++E  +++PESSP REN  E+QESDGE R D
Sbjct: 1017 AGLEDSDAEDEAVPPVNASRRRKAWSESDEEE--EQRPESSPVRENSAELQESDGEFRAD 1074

Query: 405  DEKVN 391
             EK N
Sbjct: 1075 KEKRN 1079


>ref|XP_008242215.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Prunus
            mume]
          Length = 1091

 Score = 1630 bits (4221), Expect = 0.0
 Identities = 821/1084 (75%), Positives = 924/1084 (85%), Gaps = 1/1084 (0%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            MACVYIPVQNSEEEVRVVLDQLPR+ATDI+DILKAEQA LDLWLIIAREYFKQGK+EQFR
Sbjct: 1    MACVYIPVQNSEEEVRVVLDQLPREATDIIDILKAEQASLDLWLIIAREYFKQGKLEQFR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGS  EIDEYYADVRYERIAILNALGAYY+YLGKIETKQREKEEHFI+ATQ+YNKA
Sbjct: 61   QILEEGSGSEIDEYYADVRYERIAILNALGAYYTYLGKIETKQREKEEHFILATQFYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRID+HEPSTWVGKGQLLLAKG+ + A +AF I+L+GD DNV A LGQACV F RG YSD
Sbjct: 121  SRIDIHEPSTWVGKGQLLLAKGEVDQAFSAFKIVLDGDRDNVPALLGQACVEFNRGHYSD 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SLELYKRALQV+P CP AVRLGI LCRYK+GQ+ KA+QAFQRVLQLDPENVEALVAL I+
Sbjct: 181  SLELYKRALQVHPDCPAAVRLGIGLCRYKMGQFEKARQAFQRVLQLDPENVEALVALAIM 240

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            DL  + A+GIRRGMEKMQRAFEIYPYC+++LNYLANHFF+TGQHFLVEQLTETALAVTNH
Sbjct: 241  DLHANTAAGIRRGMEKMQRAFEIYPYCAMALNYLANHFFYTGQHFLVEQLTETALAVTNH 300

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GPTKSHSYYNLARSYHSKGDYEKAG+YYMASVKEI+KP EF+ PYYGLGQVQLK+GD RS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGVYYMASVKEISKPLEFVFPYYGLGQVQLKMGDLRS 360

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            +LSNFEKVLEVYP+NC+ LK LGHIY QLGQT+K  EF+RKA KIDP D++A+LDLGELL
Sbjct: 361  ALSNFEKVLEVYPDNCDALKVLGHIYFQLGQTEKALEFMRKATKIDPCDSQAFLDLGELL 420

Query: 2379 ISTDAGAALDAFKTARGLLKKGGE-VPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            IS+D GAALD  KTAR LLKK GE VPIE+LNN+GVL FERGEFE A+QTF+EALGD IW
Sbjct: 421  ISSDGGAALDCLKTARNLLKKEGEEVPIEVLNNLGVLHFERGEFEFAQQTFREALGDGIW 480

Query: 2202 CNFINGAPQSCAIDASASIHQHKDMQLFHRLEQAGITVELPWNKISTLFNMARLLEQLHD 2023
              FI+G     +IDA+ASI Q+KD+ +FH+LE+ G  VELPWNK++TLFN+ARLLEQLH+
Sbjct: 481  LAFIDGKENPPSIDANASISQYKDLHIFHQLEKEGHLVELPWNKVTTLFNLARLLEQLHN 540

Query: 2022 TERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQLSIELIGDALKVDDKCPNALLMLG 1843
             E ASILYRLILFKYPDY+DAYLRLAA+AKARNN QLSIEL+ DALKV++KCPNALLMLG
Sbjct: 541  IETASILYRLILFKYPDYVDAYLRLAALAKARNNFQLSIELVNDALKVNNKCPNALLMLG 600

Query: 1842 DLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGNWNYFAAVRSEKRAPKLEATHLEKA 1663
            DLELKNDDWVKAK+TFRAA +AT G+DSYATL LGNWNYFAA+R+EKRAPKLEATHLEKA
Sbjct: 601  DLELKNDDWVKAKETFRAASEATEGKDSYATLSLGNWNYFAAIRNEKRAPKLEATHLEKA 660

Query: 1662 KELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGNVFVQMPDVWINL 1483
            KELYTKVL QH+ANLYAANGAGVV AEKG FDVSKD+FTQVQEAASGN+FVQMPDVWINL
Sbjct: 661  KELYTKVLAQHSANLYAANGAGVVFAEKGHFDVSKDIFTQVQEAASGNIFVQMPDVWINL 720

Query: 1482 AHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1303
            AHV+FAQGNF LAVKMYQNCLRKF+ NTD+Q+LLYLARTHYEAEQWQDCKK LLRAIHLA
Sbjct: 721  AHVYFAQGNFALAVKMYQNCLRKFFNNTDSQILLYLARTHYEAEQWQDCKKNLLRAIHLA 780

Query: 1302 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRVFSQLSAASNLHFHGF 1123
            PSNYTLRFDAGV MQKFSASTLQK K++ DEVRSTVAEL+NAVR+F QLSAAS+LHFHGF
Sbjct: 781  PSNYTLRFDAGVVMQKFSASTLQKPKKSVDEVRSTVAELENAVRLFRQLSAASSLHFHGF 840

Query: 1122 DEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHRQKLAREVTMXXXXXXXXXXXXKFQ 943
            DEKKI+THV YC HLLEAA+VH + AE EEQ+ +H+Q++AR++ +            KFQ
Sbjct: 841  DEKKIDTHVEYCSHLLEAARVHFKVAEHEEQKIRHKQEVARQMALAEEARRKAEEQRKFQ 900

Query: 942  LEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKRKDRSQIXXXXXXXXXXXXXXXXXX 763
            LE+R QEDELK+V QQEE  ERIKEQWKSSTP SKR++RS++                  
Sbjct: 901  LERRLQEDELKRVRQQEEQFERIKEQWKSSTPGSKRRERSEMDDEEGGNSEKRRRKGGKR 960

Query: 762  XXXXXXXXXRYETEEAEAXXXXXXXXXXXXDTSMNYGKHSNQMNDQDDGEDNAQDLLAAA 583
                     RY+T EAEA            D + NY + + QMN+QDD E+N QD LAAA
Sbjct: 961  RKKDKFSRSRYDTLEAEADMMEDQEELEDEDANTNYREPTGQMNEQDD-EENVQDPLAAA 1019

Query: 582  GLEDSDAEDDTAVPSYKSRMRRALSESEDDEPLQRQPESSPERENYGEMQESDGEVRGDD 403
            GLEDSDAED+ A  +   R RRA SES+DDE  +RQP SSP REN  E+Q SDGE R   
Sbjct: 1020 GLEDSDAEDEAAPSTTTLRRRRAWSESDDDEQQERQPGSSPVRENSAELQ-SDGEGREGG 1078

Query: 402  EKVN 391
            +KVN
Sbjct: 1079 DKVN 1082


>ref|XP_012077030.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Jatropha
            curcas] gi|643724703|gb|KDP33904.1| hypothetical protein
            JCGZ_07475 [Jatropha curcas]
          Length = 1066

 Score = 1629 bits (4219), Expect = 0.0
 Identities = 825/1069 (77%), Positives = 916/1069 (85%), Gaps = 2/1069 (0%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            M+ VYIPVQNSEEEVRV LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGK+EQFR
Sbjct: 1    MSSVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGSS EIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFI AT++YNKA
Sbjct: 61   QILEEGSSHEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIQATKHYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRIDMHEPSTWVGKGQLLLAKG+ E ASNAF I+LEGD DNV A LGQACV + RG Y +
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEIEQASNAFKIVLEGDRDNVAALLGQACVEYNRGHYIE 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SL  YKRALQVYP CPGAVRLGI  C YKLG + KA QAF+RVLQLDPENVEALVAL IL
Sbjct: 181  SLARYKRALQVYPNCPGAVRLGIGHCHYKLGHFKKAWQAFERVLQLDPENVEALVALAIL 240

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            DLQT+EA+GIRRGMEKMQ+AFEIYPYC+++LNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241  DLQTNEAAGIRRGMEKMQKAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GPTKSHSYYNLARSYHSKGDYE A  YY ASVKEINKP EF+ PYYGLGQVQLKLGD ++
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYETASRYYWASVKEINKPSEFVFPYYGLGQVQLKLGDIKN 360

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            +LSNFEKVLEVYP+NCETLK LGHIY+QLGQT+K QEF+RKAAKIDPRDA+A+LDLGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQTEKAQEFLRKAAKIDPRDAQAFLDLGELL 420

Query: 2379 ISTDAGAALDAFKTARGLLKKGGE-VPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            IS+D GAALDAFKTAR LL KGG+ VPIE+LNNIGV+ FER E E A   FK+ALGD IW
Sbjct: 421  ISSDTGAALDAFKTARTLLTKGGQKVPIEVLNNIGVIYFEREELEPALDAFKDALGDGIW 480

Query: 2202 CNFINGAPQSCAIDASASIHQHKDMQLFHRLEQAGITVELPWNKISTLFNMARLLEQLHD 2023
              F++G  ++  IDA+AS+ Q+KDMQLFHRLE+ G  VELPW+K++ LFN+ARLLEQ+H+
Sbjct: 481  RAFLDGKAKTYKIDAAASVLQYKDMQLFHRLEEDGFDVELPWDKVTALFNLARLLEQMHN 540

Query: 2022 TERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQLSIELIGDALKVDDKCPNALLMLG 1843
             E AS+LYRLI+FKYPDY+DAYLRLAAIAKARNN+QLSIEL+ +ALKV+DKCPNAL MLG
Sbjct: 541  IETASVLYRLIVFKYPDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNDKCPNALSMLG 600

Query: 1842 DLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGNWNYFAAVRSEKRAPKLEATHLEKA 1663
            DLELKNDDWVKAK+T RAA +AT G+DSYATL LGNWNYFAA+R+EKR PKLEATHLEKA
Sbjct: 601  DLELKNDDWVKAKETLRAASEATDGKDSYATLSLGNWNYFAAIRNEKRNPKLEATHLEKA 660

Query: 1662 KELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGNVFVQMPDVWINL 1483
            KELYT+VLVQHTANLYAANGAGVVLAEKG FDVSKDLFTQVQEAASGN+FVQMPDVWINL
Sbjct: 661  KELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFTQVQEAASGNIFVQMPDVWINL 720

Query: 1482 AHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1303
            AHV+FAQGNF LAVKMYQNCLRKFYYNTD+Q+LLYLARTHYEAEQWQDCKKTLLRAIHLA
Sbjct: 721  AHVYFAQGNFALAVKMYQNCLRKFYYNTDSQILLYLARTHYEAEQWQDCKKTLLRAIHLA 780

Query: 1302 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRVFSQLSAASNLHFHGF 1123
            PSNY LRFDAGVAMQKFSASTLQKTKRT DEVRSTV EL+NAVR+FSQLSA+SNLHFHGF
Sbjct: 781  PSNYILRFDAGVAMQKFSASTLQKTKRTVDEVRSTVDELENAVRLFSQLSASSNLHFHGF 840

Query: 1122 DEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHRQKLAREVTMXXXXXXXXXXXXKFQ 943
            DEKKI THV YCKHLLEAAKVH EAAEREEQQN+ RQ++AR++ +            KFQ
Sbjct: 841  DEKKINTHVEYCKHLLEAAKVHREAAEREEQQNRQRQEVARQMALAEDARRKAEEQRKFQ 900

Query: 942  LEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKRKDRSQIXXXXXXXXXXXXXXXXXX 763
            LE+RKQE+ELK+V QQEEH ER+KEQWK ST ASKR+DRS++                  
Sbjct: 901  LERRKQENELKRVRQQEEHFERVKEQWK-STSASKRRDRSEMDDEDGGHSEKRRRKGERK 959

Query: 762  XXXXXXXXXRYETEEAEAXXXXXXXXXXXXDTSMNYGKHSNQMNDQDD-GEDNAQDLLAA 586
                      YE EE EA            D ++NY +  +QMNDQD+  E+NA + LAA
Sbjct: 960  RKKDKSSKSHYEMEEGEADIMDDHEELEDEDANVNYREQRDQMNDQDENAEENAHERLAA 1019

Query: 585  AGLEDSDAEDDTAVPSYKSRMRRALSESEDDEPLQRQPESSPERENYGE 439
            AGLEDSDAED+  VP+  SR RRA SES+DDE L+R  +SSP REN  E
Sbjct: 1020 AGLEDSDAEDEANVPTSTSRRRRAWSESDDDEALER--KSSPVRENSAE 1066


>ref|XP_006587039.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max] gi|947088811|gb|KRH37476.1| hypothetical protein
            GLYMA_09G068600 [Glycine max]
          Length = 1089

 Score = 1627 bits (4214), Expect = 0.0
 Identities = 835/1086 (76%), Positives = 931/1086 (85%), Gaps = 3/1086 (0%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            MA VYIPVQNSEEEVRV LDQLPRDA+DILDILKAEQAPLDLWL+IAREYFKQGK++QFR
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIDQFR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGSSPEID+YYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFI+ATQYYNKA
Sbjct: 61   QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRIDMHEPSTWVGKGQLLLAKG+ E AS AF I+L+GD DNV A LGQACV F RG+YSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SLELYKRAL VYP CP AVRLGI LCRYKLGQ+ KA+QAF+RVLQLDPENVEALVAL I+
Sbjct: 181  SLELYKRALLVYPDCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVEALVALAIM 240

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            DL+T+EA+GIR GM KMQRAFEIYPYC+++LNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241  DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GPTKSHSYYNLARSYHSKGDY+KAG+YYMASVKE+NKP EF+ PYYGLGQVQ+KLGDF+S
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 360

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            +LSNFEKVLEVYP+NCETLK LGHIY+QLGQT KGQ+FIRKA KIDPRDA+A+L+LGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 420

Query: 2379 ISTDAGAALDAFKTARGLLKKGG-EVPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            I +D GAALDAFKTAR L KKGG EVPIELLNNIGVLQFERGEFELA+QTFKEALGD +W
Sbjct: 421  ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGVW 480

Query: 2202 CNFINGAPQSCAIDASASIHQHKDMQLFHRLEQAGITVELPWNKISTLFNMARLLEQLHD 2023
             +FIN   +S +IDA+ S  Q KDM+LFH LE  G  VE+PW+K++ LFN+ARLLEQL+D
Sbjct: 481  LSFINEEKKS-SIDAATSTLQFKDMKLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLND 539

Query: 2022 TERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQLSIELIGDALKVDDKCPNALLMLG 1843
            +  ASILYRL+LFKYPDYIDAYLRLAAIAKARNN+ LSIEL+ DALKV++KCPNAL MLG
Sbjct: 540  SGTASILYRLVLFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLG 599

Query: 1842 DLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGNWNYFAAVRSEKRAPKLEATHLEKA 1663
            +LELKNDDWVKAK+T RAA DAT G+DSYA+L LGNWNYFAAVR+EKR PKLEATHLEKA
Sbjct: 600  ELELKNDDWVKAKETLRAASDATEGKDSYASLSLGNWNYFAAVRNEKRNPKLEATHLEKA 659

Query: 1662 KELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGNVFVQMPDVWINL 1483
            KELYT+VL+QH++NLYAANGA VVLAEKG FDVSKD+FTQVQEAASG+VFVQMPDVWINL
Sbjct: 660  KELYTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 719

Query: 1482 AHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1303
            AHV+FAQGNFTLAVKMYQNCLRKFY+NTD+Q+LLYLARTHYEAEQWQDC KTLLRAIHLA
Sbjct: 720  AHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLA 779

Query: 1302 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRVFSQLSAASNLHFHGF 1123
            PSNYTLRFDAGVAMQKFSASTLQK KRTADEVR+TVAEL+NAVRVFSQLSAASNLH HGF
Sbjct: 780  PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGF 839

Query: 1122 DEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHRQKLAREVTMXXXXXXXXXXXXKFQ 943
            DEKKI+THVGYC HLL AAKVH EAAEREEQQ + RQ+LAR+V              KFQ
Sbjct: 840  DEKKIDTHVGYCNHLLSAAKVHLEAAEREEQQVRQRQELARQVAFAEEARRKAEEQRKFQ 899

Query: 942  LEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKRKDRSQIXXXXXXXXXXXXXXXXXX 763
            +E+RKQEDELK+V QQEEH  R+KEQWKSS+  SKR++RS                    
Sbjct: 900  MERRKQEDELKRVQQQEEHFRRVKEQWKSSS-HSKRRERSD-DEEGGGTGEKKRKKGGKR 957

Query: 762  XXXXXXXXXRYETEEAEAXXXXXXXXXXXXDTSMNYGKH-SNQMNDQDDGEDNAQDLLAA 586
                     RY+TEE E             +  +NY +    QMN  DD E+NAQ LLAA
Sbjct: 958  RKKDKHSKSRYDTEEPE-NDMMDEQEMEDEEADINYREEPQTQMN--DDAEENAQGLLAA 1014

Query: 585  AGLEDSDAEDDTAVPSYK-SRMRRALSESEDDEPLQRQPESSPERENYGEMQESDGEVRG 409
            AGLEDSDA+++   PS   +R R+ALSES+DDEPL  Q +SSP REN  +MQ SDGE+R 
Sbjct: 1015 AGLEDSDADEEAPAPSSSIARRRQALSESDDDEPL-IQRQSSPARENSADMQLSDGEIR- 1072

Query: 408  DDEKVN 391
            D +K N
Sbjct: 1073 DGDKTN 1078


>ref|XP_014501145.1| PREDICTED: protein CTR9 homolog [Vigna radiata var. radiata]
          Length = 1086

 Score = 1625 bits (4208), Expect = 0.0
 Identities = 829/1082 (76%), Positives = 929/1082 (85%), Gaps = 2/1082 (0%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            MA VYIPV NSEEEVRV LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGK++QFR
Sbjct: 1    MASVYIPVHNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGSSPEID+YYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFI+ATQYYNKA
Sbjct: 61   QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRIDMHEPSTWVGKGQLLLAKG+ E AS AF I+L+G  DNV A LGQACV F RG+YSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGVRDNVPALLGQACVEFNRGRYSD 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SL+LYKRALQV+P CP AVRLGI LCRYKLGQ+ KA+QAF+RVL LDPENVEALVAL I+
Sbjct: 181  SLDLYKRALQVFPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLHLDPENVEALVALAIM 240

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            DL+T+EA+GIR+GM KMQRAFEIYPYC+++LNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241  DLRTNEATGIRKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GPTKSHSYYNLARSYHSKGDY+KAG+YYMASVKE+NKP EF+ PYYGLGQVQ+KLGDF+S
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 360

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            +LSNFEKVLEVYP+NCETLK LGHIY+QLGQT KGQ+FIR+A KIDPRDA+A+L+LGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRRATKIDPRDAQAFLELGELL 420

Query: 2379 ISTDAGAALDAFKTARGLLKKGG-EVPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            I +D GAALDAFKTAR L KKG  EVPIELLNN+GVLQFERGEFELA+QTFKEALGD +W
Sbjct: 421  ILSDTGAALDAFKTARTLFKKGSQEVPIELLNNVGVLQFERGEFELAQQTFKEALGDGVW 480

Query: 2202 CNFINGAPQSCAIDASASIHQHKDMQLFHRLEQAGITVELPWNKISTLFNMARLLEQLHD 2023
             +FIN   +S ++DA+ S  Q KDMQLFH LE  G  VE+PW+K++ LFN+ARLLEQL++
Sbjct: 481  LSFINEENKS-SVDAATSTLQFKDMQLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLNE 539

Query: 2022 TERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQLSIELIGDALKVDDKCPNALLMLG 1843
            +  ASILYRLILFKYPDYIDAYLRLAAIAKARNN+ LSIEL+ DALKV+DKCPNAL MLG
Sbjct: 540  SGTASILYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNDKCPNALSMLG 599

Query: 1842 DLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGNWNYFAAVRSEKRAPKLEATHLEKA 1663
            +LELKNDDWVKAK+T RAA DAT G+D YATL LGNWNYFAAVR+EKR PKLEATHLEK+
Sbjct: 600  ELELKNDDWVKAKETLRAASDATDGKDPYATLSLGNWNYFAAVRNEKRNPKLEATHLEKS 659

Query: 1662 KELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGNVFVQMPDVWINL 1483
            KELYT+VL+QH++NLYAANGA VVLAEKG FDVSKD+FTQVQEAASG+VFVQMPDVWINL
Sbjct: 660  KELYTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 719

Query: 1482 AHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1303
            AHV+FAQGNF LAVKMYQNCLRKFY+NTD+Q+LLYLARTHYEAEQWQDC KTLLRAIHLA
Sbjct: 720  AHVYFAQGNFALAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLA 779

Query: 1302 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRVFSQLSAASNLHFHGF 1123
            PSNYTLRFDAGVAMQKFSASTLQK KRTADEVR+TVAEL+NAVRVFSQLSAASNLH HGF
Sbjct: 780  PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGF 839

Query: 1122 DEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHRQKLAREVTMXXXXXXXXXXXXKFQ 943
            DEKKI+THVGYC HLL AAKVH EAAEREEQQ + RQ+LAR+V +            KFQ
Sbjct: 840  DEKKIDTHVGYCNHLLSAAKVHLEAAEREEQQVRQRQELARQVALAEEARRKAEEQRKFQ 899

Query: 942  LEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKRKDRSQIXXXXXXXXXXXXXXXXXX 763
            +E+RKQEDELK+V QQEEH +R+KEQWKSST  SKR++RS                    
Sbjct: 900  MERRKQEDELKRVQQQEEHFKRVKEQWKSSTH-SKRRERSD--DEEGGTGEKKKRKSGKK 956

Query: 762  XXXXXXXXXRYETEEAEAXXXXXXXXXXXXDTSMNYGKHSNQMNDQDDGEDNAQDLLAAA 583
                     RY+TEE EA               +   +    MND++  E+NAQ LLAAA
Sbjct: 957  RKKDKHSKSRYDTEEPEADMMDEQEMEEEE-ADVYREEPQTVMNDEE--EENAQGLLAAA 1013

Query: 582  GLEDSDAEDDTAVPSYK-SRMRRALSESEDDEPLQRQPESSPERENYGEMQESDGEVRGD 406
            GLEDSDA+++ A PS   +R R+ALSES+DDEPLQRQ  SSP REN G+MQESDGE+R  
Sbjct: 1014 GLEDSDADEEMAAPSSSIARRRQALSESDDDEPLQRQ--SSPARENSGDMQESDGEIRDV 1071

Query: 405  DE 400
            D+
Sbjct: 1072 DK 1073


>ref|XP_011045987.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Populus
            euphratica]
          Length = 1089

 Score = 1623 bits (4204), Expect = 0.0
 Identities = 822/1078 (76%), Positives = 919/1078 (85%), Gaps = 2/1078 (0%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            MA VYIPVQNSEEEVRV LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGK++QFR
Sbjct: 1    MAYVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLDQFR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGSS EIDEYYADVRYERIAILNALGAYYSYLGK+ETKQREKEE+FI AT++YNKA
Sbjct: 61   QILEEGSSHEIDEYYADVRYERIAILNALGAYYSYLGKVETKQREKEEYFIQATKHYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRIDMHEPSTWVGKGQLLLAKG+ E AS AF I+LEGD DNV A LGQACV + RG Y +
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFRIVLEGDRDNVSALLGQACVEYSRGHYGE 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SL L+KRALQVYP CPGAVRLGI  C YKLG  GKA  AFQRVLQLDPENVEALV+L IL
Sbjct: 181  SLTLFKRALQVYPDCPGAVRLGIGHCHYKLGHVGKACLAFQRVLQLDPENVEALVSLAIL 240

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            DLQT+EA+ IR+GMEKMQRAFEIYPYC+++LNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241  DLQTNEAAAIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GPTKSHSYYNLARSYHSKGDYE A  YY ASVKEINKP EF+ PYYGLGQVQLKLG+ ++
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYETASRYYWASVKEINKPSEFVFPYYGLGQVQLKLGEIKN 360

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            +LSNFEKVLEVYP+NCETLK LGHIY+QLGQT+K QEF+RKAAKIDPRDA+A+LDLGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQTEKAQEFLRKAAKIDPRDAQAFLDLGELL 420

Query: 2379 ISTDAGAALDAFKTARGLLKKGGE-VPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            ISTD GAALDAFKTAR LLKKGGE VPIE+LNNI V+ FER E ELA Q FKEALGD IW
Sbjct: 421  ISTDTGAALDAFKTARSLLKKGGEEVPIEVLNNIAVIHFEREELELALQNFKEALGDGIW 480

Query: 2202 CNFINGAPQSCAIDASASIHQHKDMQLFHRLEQAGITVELPWNKISTLFNMARLLEQLHD 2023
              F+ G   +  +DA++S+ Q+KDMQ+F RLE+ G +VEL WNK++TLFN+ARLLEQLH+
Sbjct: 481  LTFLEGKANTYEVDATSSLLQYKDMQIFRRLEEEGHSVELSWNKVTTLFNLARLLEQLHN 540

Query: 2022 TERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQLSIELIGDALKVDDKCPNALLMLG 1843
            TE AS LYRLIL+KYPDY+DAYLRLAAIAKARNN+ LSIEL+ +AL V+DKCPNAL MLG
Sbjct: 541  TETASTLYRLILYKYPDYVDAYLRLAAIAKARNNLPLSIELVNEALTVNDKCPNALSMLG 600

Query: 1842 DLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGNWNYFAAVRSEKRAPKLEATHLEKA 1663
            DLELKNDDWVKAK+TFRAA +AT G+DSYATL LGNWNYFAA+R+EKR PKLEATHLEKA
Sbjct: 601  DLELKNDDWVKAKETFRAASEATDGKDSYATLSLGNWNYFAAIRNEKRNPKLEATHLEKA 660

Query: 1662 KELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGNVFVQMPDVWINL 1483
            KELYT+VLVQHTANLYAANGAGVVLAEKG FDVSKDLFTQVQEAASG++FVQMPDVWINL
Sbjct: 661  KELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFTQVQEAASGSIFVQMPDVWINL 720

Query: 1482 AHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1303
            AHV+FAQGNF LAVKMYQNCL+KF+YNTD+Q+LLYLARTHYEAEQWQDCK+TLLRAIHL 
Sbjct: 721  AHVYFAQGNFALAVKMYQNCLQKFFYNTDSQILLYLARTHYEAEQWQDCKRTLLRAIHLT 780

Query: 1302 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRVFSQLSAASNLHFHGF 1123
            PSNYTLRFDAGVAMQKFSASTLQKTKRT DEVRSTV EL+NAVR+FSQLSAASNL+F+GF
Sbjct: 781  PSNYTLRFDAGVAMQKFSASTLQKTKRTVDEVRSTVDELENAVRLFSQLSAASNLYFNGF 840

Query: 1122 DEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHRQKLAREVTMXXXXXXXXXXXXKFQ 943
            DEKKI THV YCKHLLEAA VH EAAEREEQQN+ R  LAR++ +            KFQ
Sbjct: 841  DEKKINTHVEYCKHLLEAAIVHREAAEREEQQNRQRLDLARQMALAEEARRKAEEQRKFQ 900

Query: 942  LEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKRKDRSQIXXXXXXXXXXXXXXXXXX 763
            LE+RKQEDELK+V QQEEH ER+KEQWKSST +SKR+DR+ I                  
Sbjct: 901  LERRKQEDELKRVRQQEEHFERVKEQWKSSTSSSKRRDRADIDDGEGGHGEKRRRKGGKR 960

Query: 762  XXXXXXXXXRYETEEAEAXXXXXXXXXXXXDTSMNYGKHSNQMNDQDDG-EDNAQDLLAA 586
                     RYE EEA+             D ++N+ +   QMNDQDD  E+NAQD+LAA
Sbjct: 961  RKKEKSSRSRYEMEEAD--MMDDHDEPEDDDANVNFREPGYQMNDQDDNVEENAQDVLAA 1018

Query: 585  AGLEDSDAEDDTAVPSYKSRMRRALSESEDDEPLQRQPESSPERENYGEMQESDGEVR 412
            AGLEDSDA+DD A PS   R +RA SES++DE  +R+P+SS  REN  ++Q+SDGE R
Sbjct: 1019 AGLEDSDADDDAAAPSSAGRRKRAWSESDEDEISERKPQSSLLRENSADLQDSDGEFR 1076


>gb|KHG23804.1| RNA polymerase-associated CTR9 [Gossypium arboreum]
          Length = 1111

 Score = 1623 bits (4202), Expect = 0.0
 Identities = 822/1106 (74%), Positives = 924/1106 (83%), Gaps = 21/1106 (1%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            MACVYIPVQNSEEEVRV LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGKVEQFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIET+QREKEEHFI+ATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETRQREKEEHFILATQYYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRIDMHEPSTWVGKGQLLLAKG+ E A +AF I+LEGD DNV A LGQACV F RG+Y+D
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQAFSAFKIVLEGDRDNVPALLGQACVEFNRGRYAD 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SLELYKRALQVYP CPGAVRLGI LCRYKLGQ+ KA+QAFQRVL+LD ENVEALVAL I+
Sbjct: 181  SLELYKRALQVYPNCPGAVRLGIGLCRYKLGQFQKARQAFQRVLELDSENVEALVALAIM 240

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            DLQ ++A+GI++GM+KM+RAFEIYPYC+++LNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241  DLQANDAAGIQKGMDKMRRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GPTKSHS+YNLARSYHSKGD+EKAG YYMAS+KEINKPQEF+ PYYGLGQV+LK GDFR+
Sbjct: 301  GPTKSHSFYNLARSYHSKGDFEKAGYYYMASIKEINKPQEFVFPYYGLGQVKLKSGDFRT 360

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            +LSNFEKVLEVYP+NCETLK LGHIY+QLGQ  K QEF+RKA KIDPRDA+A+LDL ELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQVDKAQEFMRKATKIDPRDAQAFLDLAELL 420

Query: 2379 ISTDAGAALDAFKTARGLLKKGGE-VPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            IS+D GAALD+FKTAR LL+KGG+ VP+E+LNNIGVL FER E ELA ++F +ALGD +W
Sbjct: 421  ISSDTGAALDSFKTARNLLEKGGQAVPVEVLNNIGVLHFEREELELALESFNKALGDGVW 480

Query: 2202 CNFINGAPQSCAIDASASIHQHKDMQLFHRLEQAGITVELPWNKISTLFNMARLLEQLHD 2023
                   P+   I+ASAS+  +KDMQ+FHRLE+ G+ VELPWNK++ +FN+ARL EQLH+
Sbjct: 481  LALTGNKPKPYVIEASASVLDYKDMQVFHRLEEDGLAVELPWNKVTAVFNLARLHEQLHN 540

Query: 2022 TERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQLSIELIGDALKVDDKCPNALLMLG 1843
            T  A+ILYRLILFKYPDYIDAYLRLAAIAKARNN+QLSIEL+ +ALKV+DKCPNAL MLG
Sbjct: 541  TGIANILYRLILFKYPDYIDAYLRLAAIAKARNNLQLSIELVNEALKVNDKCPNALSMLG 600

Query: 1842 DLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGNWNYFAAVRSEKRAPKLEATHLEKA 1663
            DLELKNDDWVKAK+T R+A DAT G+DSYA L LGNWNYFAA+R+EKR PKLEATHLEKA
Sbjct: 601  DLELKNDDWVKAKETLRSASDATDGKDSYAILSLGNWNYFAAIRNEKRNPKLEATHLEKA 660

Query: 1662 KELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGNVFVQMPDVWINL 1483
            KELYT+VL QHT NLYAANGA VVLAEKGQFDVSKD+FTQVQE ASG+VFVQMPDVWINL
Sbjct: 661  KELYTRVLAQHTDNLYAANGAAVVLAEKGQFDVSKDIFTQVQEGASGSVFVQMPDVWINL 720

Query: 1482 AHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1303
            AH+ FAQGNF LAVKMYQNCLRKFYYNTD+Q+LLYLARTHYEAEQWQ+CKKTLLRAIHLA
Sbjct: 721  AHIFFAQGNFALAVKMYQNCLRKFYYNTDSQILLYLARTHYEAEQWQECKKTLLRAIHLA 780

Query: 1302 PSNYTLRFDAGVAMQKFSASTLQKTKRTADE-----------------VRSTVAELKNAV 1174
            PSNYTLRFDAGVAMQKFS STLQK KRTADE                 VRSTVAEL+NAV
Sbjct: 781  PSNYTLRFDAGVAMQKFSTSTLQKEKRTADEIMRDTVILPCIFKQQLCVRSTVAELENAV 840

Query: 1173 RVFSQLSAASNLHFHGFDEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHRQKLAREV 994
            R+FSQLSAASNLH HGFDEKKI THV YCKHLLEAAKVH EAAEREEQQN+ +Q+ AR++
Sbjct: 841  RIFSQLSAASNLHLHGFDEKKINTHVEYCKHLLEAAKVHREAAEREEQQNRQKQEAARQL 900

Query: 993  TMXXXXXXXXXXXXKFQLEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKRKDRSQIX 814
             +            K+ LE+RKQEDE K++ Q EEH +R  EQWKSS P S+R+DRS+I 
Sbjct: 901  ALAEEARRKAEEQRKYLLERRKQEDEQKRLQQAEEHFKR--EQWKSSNPGSRRRDRSEID 958

Query: 813  XXXXXXXXXXXXXXXXXXXXXXXXXXRYETEEAEAXXXXXXXXXXXXDTSMNYGKHSNQM 634
                                       YE ++ E             D + NYG+ + +M
Sbjct: 959  DEEGGHSEKRRRKGGKRRKKDKNKSR-YERDDEEPDMMDDREEMEDEDANRNYGESTTRM 1017

Query: 633  NDQDDGE-DNAQDLLAAAGLEDSDAEDDTAVP--SYKSRMRRALSESEDDEPLQRQPESS 463
            NDQDD   +NAQDLLAAAGLEDSD ED+TA    S   R RRA SES+DDE LQR+PESS
Sbjct: 1018 NDQDDDNGENAQDLLAAAGLEDSDMEDETAAAPSSAAGRRRRAWSESDDDEQLQRRPESS 1077

Query: 462  PERENYGEMQESDGEVRGDDEKVNEG 385
            P R N  E+QESDGE+R D+ K N G
Sbjct: 1078 PVRGNSAELQESDGEIREDNRKPNGG 1103


>ref|XP_008450914.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
            melo]
          Length = 1077

 Score = 1621 bits (4197), Expect = 0.0
 Identities = 820/1079 (75%), Positives = 925/1079 (85%), Gaps = 3/1079 (0%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            MACVYIPVQNSEEEVRV LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGK+EQFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFI+ATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRIDMHEPSTWVGKGQLLL KG+ E A  AF I+L+GD DNV A LGQACV F RG YS+
Sbjct: 121  SRIDMHEPSTWVGKGQLLLTKGEVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGHYSE 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SLELYKRALQVYP CP AVRLGI LCRY+L QYGKA+QAF+RVLQLDPENVEALVAL I+
Sbjct: 181  SLELYKRALQVYPDCPAAVRLGIGLCRYQLKQYGKAQQAFERVLQLDPENVEALVALAII 240

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            DL T+EA  IR GMEKMQRAFEIYP+C+++LNYLANHFFFTGQHFLVEQLTETALA+TNH
Sbjct: 241  DLNTNEAGRIRNGMEKMQRAFEIYPFCAMALNYLANHFFFTGQHFLVEQLTETALAITNH 300

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GPTKSHS+YNLARSYHSKGDYEKAGLYYMAS KE NKP+EF+ PYYGLGQVQLK+GD RS
Sbjct: 301  GPTKSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPYYGLGQVQLKMGDLRS 360

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            +LSNFEKVLEVYP+NCETLK LGHIY+QLGQ +K QE +RKA KIDPRDA+A+LDLGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKIDPRDAQAFLDLGELL 420

Query: 2379 ISTDAGAALDAFKTARGLLKKGG-EVPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            ISTD GAALDAFKTA  LL+KGG EVPIE+LNN+GVL FER EFELA++ FKEALGD IW
Sbjct: 421  ISTDEGAALDAFKTASILLRKGGQEVPIEVLNNLGVLHFEREEFELAERIFKEALGDGIW 480

Query: 2202 CNFINGAPQSCAIDASASIHQHKDMQLFHRLEQAGITVELPWNKISTLFNMARLLEQLHD 2023
             +FI+G  +  AI+ASAS+ Q+K+++LF++LE+ G  + LPW K+++LFN+ARLLEQLH 
Sbjct: 481  LDFIDGKVRCPAIEASASVLQYKNVELFYQLEREGRAIVLPWKKVTSLFNLARLLEQLHR 540

Query: 2022 TERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQLSIELIGDALKVDDKCPNALLMLG 1843
             E +S+LYRLILFKYPDY+DAYLRLA+IAKARN VQLSIEL+ DALKV+DKC NAL MLG
Sbjct: 541  IEVSSVLYRLILFKYPDYVDAYLRLASIAKARNYVQLSIELVNDALKVNDKCSNALSMLG 600

Query: 1842 DLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGNWNYFAAVRSEKRAPKLEATHLEKA 1663
            +LELKNDDWV+AK+TFRAA +AT G+DSYATL LGNWNYFAA+R+EKR PKLEATHLEK+
Sbjct: 601  ELELKNDDWVRAKETFRAAGEATDGKDSYATLSLGNWNYFAALRNEKRNPKLEATHLEKS 660

Query: 1662 KELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGNVFVQMPDVWINL 1483
            KELYT+VLVQH ANLYAANGAGV+LAEKGQFDVSKD+FTQVQEAASGN+FVQMPDVWINL
Sbjct: 661  KELYTRVLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINL 720

Query: 1482 AHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1303
            AHV+FAQGNF+LAVKMYQNCLRKFYYNTD Q+LLYLART+YEAEQWQDCKKTLLRAIHLA
Sbjct: 721  AHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYEAEQWQDCKKTLLRAIHLA 780

Query: 1302 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRVFSQLSAASNLHFHGF 1123
            PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAEL+NAVRVFSQLSAASNLHFHGF
Sbjct: 781  PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGF 840

Query: 1122 DEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHRQKLAREVTMXXXXXXXXXXXXKFQ 943
            DEKKI+THVGYCKHLLEAA VH +AAE EEQQ + RQ+LAR+V +            KFQ
Sbjct: 841  DEKKIDTHVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQ 900

Query: 942  LEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKRKDRSQIXXXXXXXXXXXXXXXXXX 763
            LE+RK EDE K++MQQE+H +R+KEQWKS+TPA KR++RS+I                  
Sbjct: 901  LERRKLEDEEKRMMQQEQHFKRVKEQWKSTTPA-KRRERSEIDDDEAGNSEKRRRKGGKR 959

Query: 762  XXXXXXXXXRYETEEAEAXXXXXXXXXXXXDTSMNYGKHSNQMNDQ-DDGEDNAQDLLAA 586
                      YETEEA+             D ++ Y +  +Q+NDQ DD E N QD LA 
Sbjct: 960  RKKDRKGKSHYETEEAD-NDMMDDQELYNEDNNIGYRESRSQVNDQVDDFEGNDQDALAE 1018

Query: 585  AGLEDSDAEDDTAVPSYKSRMRRAL-SESEDDEPLQRQPESSPERENYGEMQESDGEVR 412
            AGLEDSDAED+   PS  +  RRA  S+SE+DEP+  Q ES  +REN   +++SDGE+R
Sbjct: 1019 AGLEDSDAEDEAGAPSSNAARRRATWSDSEEDEPIDTQRESRLQRENSAGLEDSDGEIR 1077


>gb|KOM39935.1| hypothetical protein LR48_Vigan04g013300 [Vigna angularis]
          Length = 1083

 Score = 1620 bits (4194), Expect = 0.0
 Identities = 828/1082 (76%), Positives = 928/1082 (85%), Gaps = 2/1082 (0%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            MA VYIPVQNSEEEVRV LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGK++QFR
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGSSPEID+YYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFI+ATQYYNKA
Sbjct: 61   QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRIDMHEPSTWVGKGQLLLAKG+ E AS AF I+L+G  DNV A LGQACV F RG+YSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGVRDNVPALLGQACVEFNRGRYSD 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SL+LYKRALQV+P CP AVRLGI LCRYKLGQ+ KA+QAF+R   LDPENVEALVAL I+
Sbjct: 181  SLDLYKRALQVFPNCPAAVRLGIGLCRYKLGQFEKAQQAFER---LDPENVEALVALAIM 237

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            DL+T+EA+GIR+GM KMQRAFEIYPYC+++LNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 238  DLRTNEATGIRKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 297

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GPTKSHSYYNLARSYHSKGDY+KAG+YYMASVKE+NKP EF+ PYYGLGQVQ+KLGDF+S
Sbjct: 298  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 357

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            +LSNFEKVLEVYP+NCETLK LGHIY+QLGQT KGQ+FIR+A KIDPRDA+A+L+LGELL
Sbjct: 358  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRRATKIDPRDAQAFLELGELL 417

Query: 2379 ISTDAGAALDAFKTARGLLKKGG-EVPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            I +D GAALDAFKTAR L KKGG EVPIELLNN+GVLQFERGEFELA+QTFKE+LGD +W
Sbjct: 418  ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNVGVLQFERGEFELAQQTFKESLGDGVW 477

Query: 2202 CNFINGAPQSCAIDASASIHQHKDMQLFHRLEQAGITVELPWNKISTLFNMARLLEQLHD 2023
             +FIN   +S ++DA+ S  Q KDMQLFH LE  G  VE+PW+K++ LFN+ARLLEQL+D
Sbjct: 478  LSFINEENKS-SVDAATSTLQFKDMQLFHDLESDGHHVEVPWDKVTVLFNLARLLEQLND 536

Query: 2022 TERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQLSIELIGDALKVDDKCPNALLMLG 1843
            +  ASILYRLILFKYPDYIDAYLRLAAIAKARNN+ LSIEL+ DALKV+DKCPNAL MLG
Sbjct: 537  SGTASILYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNDKCPNALSMLG 596

Query: 1842 DLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGNWNYFAAVRSEKRAPKLEATHLEKA 1663
            +LELKNDDWVKAK+T RAA DAT G+D YATL LGNWNYFAAVR+EKR PKLEATHLEK+
Sbjct: 597  ELELKNDDWVKAKETLRAASDATDGKDPYATLSLGNWNYFAAVRNEKRNPKLEATHLEKS 656

Query: 1662 KELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGNVFVQMPDVWINL 1483
            KELYT+VL+QH++NLYAANGA VVLAEKG FDVSKD+FTQVQEAASG+VFVQMPDVWINL
Sbjct: 657  KELYTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 716

Query: 1482 AHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1303
            AHV+FAQGNF LAVKMYQNCLRKFY+NTD+Q+LLYLARTHYEAEQWQDC KTLLRAIHLA
Sbjct: 717  AHVYFAQGNFALAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLA 776

Query: 1302 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRVFSQLSAASNLHFHGF 1123
            PSNYTLRFDAGVAMQKFSASTLQK KRTADEVR+TVAEL+NAVRVFSQLSAASNLH HGF
Sbjct: 777  PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGF 836

Query: 1122 DEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHRQKLAREVTMXXXXXXXXXXXXKFQ 943
            DEKKI+THVGYC HLL AAKVH EAAEREEQQ + RQ+LAR+V +            KFQ
Sbjct: 837  DEKKIDTHVGYCNHLLSAAKVHLEAAEREEQQVRQRQELARQVALAEEARRKAEEQRKFQ 896

Query: 942  LEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKRKDRSQIXXXXXXXXXXXXXXXXXX 763
            +E+RKQEDELK+V QQEEH +R+KEQWKSST  SKR++RS                    
Sbjct: 897  MERRKQEDELKRVQQQEEHFKRVKEQWKSSTH-SKRRERSD--DEEGGTGEKKKRKSGKK 953

Query: 762  XXXXXXXXXRYETEEAEAXXXXXXXXXXXXDTSMNYGKHSNQMNDQDDGEDNAQDLLAAA 583
                     RY+TEE E                +   +    MND++  E+NAQ LLAAA
Sbjct: 954  RKKDKHSKSRYDTEEPETDMMDEQEMEEEE-ADVYREEPQTVMNDEE--EENAQGLLAAA 1010

Query: 582  GLEDSDAEDDTAVPSYK-SRMRRALSESEDDEPLQRQPESSPERENYGEMQESDGEVRGD 406
            GLEDSDA+++ A PS   +R R+ALSES+DDEPLQRQ  SSP REN G+MQESDGE+R  
Sbjct: 1011 GLEDSDADEEMAAPSSSIARRRQALSESDDDEPLQRQ--SSPARENSGDMQESDGEIRDV 1068

Query: 405  DE 400
            D+
Sbjct: 1069 DK 1070


>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max] gi|947063260|gb|KRH12521.1| hypothetical protein
            GLYMA_15G176400 [Glycine max]
          Length = 1088

 Score = 1620 bits (4194), Expect = 0.0
 Identities = 830/1086 (76%), Positives = 928/1086 (85%), Gaps = 3/1086 (0%)
 Frame = -2

Query: 3639 MACVYIPVQNSEEEVRVVLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 3460
            MA VYIPVQNSEEEVRV LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGK++Q+R
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQYR 60

Query: 3459 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 3280
            QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFI+ATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3279 SRIDMHEPSTWVGKGQLLLAKGDTENASNAFMIILEGDPDNVLAFLGQACVHFYRGQYSD 3100
            SRIDMHEPSTWVGKGQLLLAKG+ E AS AF I+L+GD DNV A LGQACV F RG++SD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDHDNVPALLGQACVEFNRGRFSD 180

Query: 3099 SLELYKRALQVYPRCPGAVRLGIALCRYKLGQYGKAKQAFQRVLQLDPENVEALVALGIL 2920
            SLELYKR LQVYP CP AVRLGI LCRYKLGQ+ KA+QAF+RVLQLDPENVE+L+AL I+
Sbjct: 181  SLELYKRVLQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVESLIALAIM 240

Query: 2919 DLQTDEASGIRRGMEKMQRAFEIYPYCSLSLNYLANHFFFTGQHFLVEQLTETALAVTNH 2740
            DL+T+EA+GIR GM KMQRAFEIYPYC+++LNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241  DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2739 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPYYGLGQVQLKLGDFRS 2560
            GPTKSHSYYNLARSYHSKGDY+KAG+YYMASVKE+NKP EF+ PYYGLGQVQ+KLGDF+S
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 360

Query: 2559 SLSNFEKVLEVYPENCETLKTLGHIYIQLGQTKKGQEFIRKAAKIDPRDAEAYLDLGELL 2380
            +LSNFEKVLEVYP+NCETLK LGHIY+QLGQT KGQ+FIRKA KIDPRDA+A+L+LGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 420

Query: 2379 ISTDAGAALDAFKTARGLLKKGG-EVPIELLNNIGVLQFERGEFELAKQTFKEALGDDIW 2203
            I +D GAALDAFKTA  L KKGG EVPIELLNNIGVLQFERGEFELA+QTFKEALGD +W
Sbjct: 421  ILSDTGAALDAFKTAHTLFKKGGQEVPIELLNNIGVLQFERGEFELARQTFKEALGDGVW 480

Query: 2202 CNFINGAPQSCAIDASASIHQHKDMQLFHRLEQAGITVELPWNKISTLFNMARLLEQLHD 2023
             +FIN   +S +IDA+ S  Q KDMQLFH LE  G  VE+PW+K++ LFN+ARLLEQL+D
Sbjct: 481  LSFINEENKS-SIDAATSTLQFKDMQLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLYD 539

Query: 2022 TERASILYRLILFKYPDYIDAYLRLAAIAKARNNVQLSIELIGDALKVDDKCPNALLMLG 1843
            +  ASI YRLILFKYPDYIDAYLRLAAIAKARNN+ LSIEL+ DALKV++KCPNAL MLG
Sbjct: 540  SGTASIFYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLG 599

Query: 1842 DLELKNDDWVKAKDTFRAAKDATAGQDSYATLCLGNWNYFAAVRSEKRAPKLEATHLEKA 1663
            +LELKNDDWVKAK+T R A DAT G+DSYATL LGNWNYFAAVR+EKR PKLEATHLEKA
Sbjct: 600  ELELKNDDWVKAKETLRTASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKA 659

Query: 1662 KELYTKVLVQHTANLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGNVFVQMPDVWINL 1483
            KEL T+VL+QH++NLYAANGA VVLAEKG FDVSKD+FTQVQEAASG+VFVQMPDVWINL
Sbjct: 660  KELCTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 719

Query: 1482 AHVHFAQGNFTLAVKMYQNCLRKFYYNTDNQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1303
            AHV+FAQGNFTLAVKMYQNCLRKFY+NTD+Q+LLYLARTHYEAEQWQDC KTLLRAIHLA
Sbjct: 720  AHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLA 779

Query: 1302 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRVFSQLSAASNLHFHGF 1123
            PSNYTLRFDAGVAMQKFSASTLQK KRTADEVR+TVAEL+NAVRVFSQLSAASNLH HGF
Sbjct: 780  PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGF 839

Query: 1122 DEKKIETHVGYCKHLLEAAKVHCEAAEREEQQNKHRQKLAREVTMXXXXXXXXXXXXKFQ 943
            DEKKI+THVGYC HLL AAKVH EAAE EEQQ + RQ+LAR+V +            KFQ
Sbjct: 840  DEKKIDTHVGYCNHLLSAAKVHLEAAEHEEQQVRQRQELARQVALAEEARRKAEEQRKFQ 899

Query: 942  LEKRKQEDELKKVMQQEEHLERIKEQWKSSTPASKRKDRSQIXXXXXXXXXXXXXXXXXX 763
            +E+RKQEDELK+V +QEEH  R+KEQWKSS+  SKR++RS                    
Sbjct: 900  MERRKQEDELKRVQKQEEHFRRVKEQWKSSSH-SKRRERSD--DEEGGTGEKKRKKGGKR 956

Query: 762  XXXXXXXXXRYETEEAEAXXXXXXXXXXXXDTSMNYGKH-SNQMNDQDDGEDNAQDLLAA 586
                     RY+ EE E             +  +NY +    QMND  D E+NAQ LLAA
Sbjct: 957  RKKDKHSKLRYDAEEPE-DDLMDEQGMEDEEADINYREEPQTQMND--DAEENAQGLLAA 1013

Query: 585  AGLEDSDAEDDTAVPSYK-SRMRRALSESEDDEPLQRQPESSPERENYGEMQESDGEVRG 409
            AGLEDSDA+++TA PS   +R R+ALSES+DDEPL  Q +SSP R+N  +MQ SDGE+R 
Sbjct: 1014 AGLEDSDADEETAAPSSSIARRRQALSESDDDEPL-LQRQSSPVRQNSADMQLSDGEIR- 1071

Query: 408  DDEKVN 391
            D +K N
Sbjct: 1072 DGDKTN 1077