BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00007000
         (1230 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010260105.1| PREDICTED: THO complex subunit 4A [Nelumbo n...   311   6e-82
ref|XP_010253243.1| PREDICTED: THO complex subunit 4A-like isofo...   300   2e-78
ref|XP_002284215.1| PREDICTED: THO complex subunit 4A [Vitis vin...   295   5e-77
ref|XP_002531375.1| RNA and export factor binding protein, putat...   290   2e-75
ref|XP_012064998.1| PREDICTED: THO complex subunit 4A [Jatropha ...   286   2e-74
ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citr...   285   7e-74
ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isofor...   282   4e-73
ref|XP_012471387.1| PREDICTED: THO complex subunit 4A [Gossypium...   281   8e-73
ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isofor...   280   2e-72
ref|XP_010092777.1| RNA and export factor-binding protein 2 [Mor...   279   4e-72
ref|XP_007016490.1| RNA-binding family protein [Theobroma cacao]...   279   4e-72
gb|KHN21975.1| RNA and export factor-binding protein 2 [Glycine ...   276   2e-71
gb|KHN32110.1| RNA and export factor-binding protein 2 [Glycine ...   276   3e-71
ref|XP_007205766.1| hypothetical protein PRUPE_ppa010358mg [Prun...   276   3e-71
ref|XP_008223173.1| PREDICTED: THO complex subunit 4A [Prunus mume]   274   1e-70
gb|KHG01793.1| THO complex subunit 4 [Gossypium arboreum]             274   1e-70
ref|XP_009628483.1| PREDICTED: THO complex subunit 4A-like isofo...   274   1e-70
ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isofor...   274   1e-70
ref|XP_007027070.1| RNA-binding family protein [Theobroma cacao]...   270   1e-69
ref|XP_012474521.1| PREDICTED: THO complex subunit 4A-like [Goss...   270   2e-69

>ref|XP_010260105.1| PREDICTED: THO complex subunit 4A [Nelumbo nucifera]
          Length = 244

 Score =  311 bits (798), Expect = 6e-82
 Identities = 165/250 (66%), Positives = 180/250 (72%), Gaps = 1/250 (0%)
 Frame = -2

Query: 1049 SNLDKSLDDIIKMNKSSGGSNPRGRARNSGPGPSRRFQNRTANRMAPYPTAN-VQAPDAK 873
            S LD +L+D+IK NK SGG N RGR R SGPGPSRRF NR ANR APY T   VQAPD+ 
Sbjct: 3    SALDMTLEDLIKNNKKSGGGNFRGRGRGSGPGPSRRFPNRGANRTAPYSTGKPVQAPDSA 62

Query: 872  WQHDMFTDHAAAFPVPLARVSGIETGTKLVISNLEYGVSDEDIKELFAEVGDIKRYSIHY 693
            WQHDMFTD AAA+P   AR S IETGTKL ISNLEYGVS+EDIKELF+EVGD+KRY++HY
Sbjct: 63   WQHDMFTDQAAAYPAQAARTSAIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYTVHY 122

Query: 692  DRSGRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPAFVTPATNVMY 513
            DRSGRSKGTAEVVFSRR DA AAVKRYNNVQLDGKPMKIE+VG NIA P  V PA N  +
Sbjct: 123  DRSGRSKGTAEVVFSRRADALAAVKRYNNVQLDGKPMKIEVVGTNIATPVAVPPAANGGF 182

Query: 512  GNQTGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVSADDLDADLE 333
            GN  G PRS QGR GAM                              + +SA+DLDADLE
Sbjct: 183  GNPNGVPRSGQGRGGAMGRSRGGGGRGFGRGRGRRRDRG--------EQISAEDLDADLE 234

Query: 332  KYHSEAMQTN 303
            KYHSEAMQ N
Sbjct: 235  KYHSEAMQIN 244


>ref|XP_010253243.1| PREDICTED: THO complex subunit 4A-like isoform X1 [Nelumbo nucifera]
          Length = 241

 Score =  300 bits (767), Expect = 2e-78
 Identities = 158/250 (63%), Positives = 178/250 (71%), Gaps = 1/250 (0%)
 Frame = -2

Query: 1049 SNLDKSLDDIIKMNKSSGGSNPRGRARNSGPGPSRRFQNRTANRMAPYPTA-NVQAPDAK 873
            S+LD SLDD+IK NK SGGSN RGR R SGPGP+RR  NR ANR  PY    +VQAPD+ 
Sbjct: 3    SSLDMSLDDLIKNNKKSGGSNFRGRGRGSGPGPARRAPNRGANRTTPYSMGKSVQAPDSA 62

Query: 872  WQHDMFTDHAAAFPVPLARVSGIETGTKLVISNLEYGVSDEDIKELFAEVGDIKRYSIHY 693
            WQHDMFTD AAA+P   +R S IETGTKL ISNL+YGVS++DIKELF+EVGD+KRY+IHY
Sbjct: 63   WQHDMFTDQAAAYPAQASRASAIETGTKLYISNLDYGVSNDDIKELFSEVGDLKRYTIHY 122

Query: 692  DRSGRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPAFVTPATNVMY 513
            DRSGRSKGTAEVVFSRR DA AAVKRYNNVQLDGKPMKIEIVG N+  PA    ATN  +
Sbjct: 123  DRSGRSKGTAEVVFSRRADALAAVKRYNNVQLDGKPMKIEIVGTNVTTPAVAPAATNGKF 182

Query: 512  GNQTGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVSADDLDADLE 333
            GN    PRS QGR GA+                              + ++A+DLDADLE
Sbjct: 183  GNPNSVPRSGQGRGGAI-----------GRPRGRGFGRGRGRGRGRAEQITAEDLDADLE 231

Query: 332  KYHSEAMQTN 303
            KYHSEAMQ N
Sbjct: 232  KYHSEAMQIN 241


>ref|XP_002284215.1| PREDICTED: THO complex subunit 4A [Vitis vinifera]
            gi|297746115|emb|CBI16171.3| unnamed protein product
            [Vitis vinifera]
          Length = 243

 Score =  295 bits (755), Expect = 5e-77
 Identities = 162/252 (64%), Positives = 177/252 (70%), Gaps = 2/252 (0%)
 Frame = -2

Query: 1052 MSN-LDKSLDDIIKMNK-SSGGSNPRGRARNSGPGPSRRFQNRTANRMAPYPTANVQAPD 879
            MSN LD SLDD+IK NK S GG N RGR R SGPGP+RR  NR ANR+ PY  +  +AP+
Sbjct: 1    MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSGPGPARRLPNRGANRITPYSVS--KAPE 58

Query: 878  AKWQHDMFTDHAAAFPVPLARVSGIETGTKLVISNLEYGVSDEDIKELFAEVGDIKRYSI 699
              WQHDMF D AAA+P    R S IETGTKL ISNL+YGVS+EDIKELF+EVGD+KRYSI
Sbjct: 59   TTWQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSI 118

Query: 698  HYDRSGRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPAFVTPATNV 519
            HYDRSGRSKGTAEVVFSRR DA AAVKRYNNVQLDGKPMKIEIVG NIA PA V P TN 
Sbjct: 119  HYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPPVTNG 178

Query: 518  MYGNQTGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVSADDLDAD 339
             +GN  G  RS QGRVG+                               + VSA+DLDAD
Sbjct: 179  TFGNSNGGLRSAQGRVGSQGRPRGGSGGRGFGRGRGRGRGRG-------EKVSAEDLDAD 231

Query: 338  LEKYHSEAMQTN 303
            LEKYHSEAMQ N
Sbjct: 232  LEKYHSEAMQIN 243


>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
            gi|223529035|gb|EEF31023.1| RNA and export factor binding
            protein, putative [Ricinus communis]
          Length = 247

 Score =  290 bits (742), Expect = 2e-75
 Identities = 162/254 (63%), Positives = 174/254 (68%), Gaps = 5/254 (1%)
 Frame = -2

Query: 1049 SNLDKSLDDIIKMNKSSGGSNPRGRARNSGPGPSRRFQNRTANRMAPYPTANVQAPDAKW 870
            S LD SLDDIIK NK  G  N RGR R+SGPGP+RRF NR  NR APY  A  +AP++ W
Sbjct: 3    SALDMSLDDIIKSNKKPGSGNSRGRGRSSGPGPTRRFNNRGTNRAAPYAAA--KAPESTW 60

Query: 869  QHDMFTDHAAAFPVPL-----ARVSGIETGTKLVISNLEYGVSDEDIKELFAEVGDIKRY 705
            QHDMFTD              +R SGIETGTKL ISNLEYGVS+EDIKELF+EVGD+KRY
Sbjct: 61   QHDMFTDQGGMGMFQGQGGGGSRASGIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRY 120

Query: 704  SIHYDRSGRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPAFVTPAT 525
            SIHYDRSGRSKGTAEVVFSRR DA AAVKRYNNVQLDGKPMKIEIVG NIA PA  TPA 
Sbjct: 121  SIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPA-ATPAA 179

Query: 524  NVMYGNQTGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVSADDLD 345
            N  +GN  GAPR  QGR G M                              + VSA+DLD
Sbjct: 180  NGNFGNSNGAPRGGQGRGGTMRRPRGASSDGRGFGRGRGRGRGRG------EKVSAEDLD 233

Query: 344  ADLEKYHSEAMQTN 303
            ADLEKYHSEAMQTN
Sbjct: 234  ADLEKYHSEAMQTN 247


>ref|XP_012064998.1| PREDICTED: THO complex subunit 4A [Jatropha curcas]
            gi|643738220|gb|KDP44208.1| hypothetical protein
            JCGZ_05675 [Jatropha curcas]
          Length = 248

 Score =  286 bits (733), Expect = 2e-74
 Identities = 156/249 (62%), Positives = 169/249 (67%)
 Frame = -2

Query: 1049 SNLDKSLDDIIKMNKSSGGSNPRGRARNSGPGPSRRFQNRTANRMAPYPTANVQAPDAKW 870
            S LD SLDDIIK NK  G  N RGR R SGPGP+RRF NR ANR APY TA  +AP+  W
Sbjct: 3    SALDMSLDDIIKSNKKPGSGNSRGRGRASGPGPTRRFTNRVANRAAPYSTA--KAPETTW 60

Query: 869  QHDMFTDHAAAFPVPLARVSGIETGTKLVISNLEYGVSDEDIKELFAEVGDIKRYSIHYD 690
            QHDMFTD    +     R S IETGTKL ISNLEYGVS+EDIKELF+EVGD+KRY+IHYD
Sbjct: 61   QHDMFTDQGMGYAGQGGRASAIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYTIHYD 120

Query: 689  RSGRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPAFVTPATNVMYG 510
            RSGRSKGTAEVVFSRR DA AAVKRYNNVQLDGKPMKIEIVG NIA PA    A N  +G
Sbjct: 121  RSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPA-APSAANGTFG 179

Query: 509  NQTGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVSADDLDADLEK 330
            +     R  QGR GA+                              + VSA+DLDADLEK
Sbjct: 180  SSNAVSRGGQGRGGAVGRQRGGSGGGRGFGRGRGRGRGGGGGGGRGEKVSAEDLDADLEK 239

Query: 329  YHSEAMQTN 303
            YHSEAMQTN
Sbjct: 240  YHSEAMQTN 248


>ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citrus clementina]
            gi|567864256|ref|XP_006424777.1| hypothetical protein
            CICLE_v10029160mg [Citrus clementina]
            gi|567864258|ref|XP_006424778.1| hypothetical protein
            CICLE_v10029160mg [Citrus clementina]
            gi|567864260|ref|XP_006424779.1| hypothetical protein
            CICLE_v10029160mg [Citrus clementina]
            gi|557526710|gb|ESR38016.1| hypothetical protein
            CICLE_v10029160mg [Citrus clementina]
            gi|557526711|gb|ESR38017.1| hypothetical protein
            CICLE_v10029160mg [Citrus clementina]
            gi|557526712|gb|ESR38018.1| hypothetical protein
            CICLE_v10029160mg [Citrus clementina]
            gi|557526713|gb|ESR38019.1| hypothetical protein
            CICLE_v10029160mg [Citrus clementina]
          Length = 247

 Score =  285 bits (728), Expect = 7e-74
 Identities = 159/253 (62%), Positives = 175/253 (69%), Gaps = 4/253 (1%)
 Frame = -2

Query: 1049 SNLDKSLDDIIKMNKSSGGSNPRGRARNSGPGPSRRFQNRTANRMAPYPTANVQAPDAKW 870
            S LD SLDDIIK NK SG  N RGR R SGPGP+RR  NR ANR+APY TA  +AP+  W
Sbjct: 3    SALDMSLDDIIKNNKKSGSGNFRGRGRGSGPGPARRIPNRGANRVAPYTTA--KAPETTW 60

Query: 869  QHDMFTDHAAAFPVPLA-RVSGIETGTKLVISNLEYGVSDEDIKELFAEVGDIKRYSIHY 693
            QHDMF D  +AFPV  A R S IETGTKL ISNL+YGVS+EDIKELF+EVGD+KRYSIHY
Sbjct: 61   QHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHY 120

Query: 692  DRSGRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPAFVTPATNVMY 513
            DRSGRSKGTAEVV+SRR DA AAVKRYNNVQLDGKPMKIEIVG NIA      PA NV +
Sbjct: 121  DRSGRSKGTAEVVYSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNIATRT-AAPAANVNF 179

Query: 512  GNQTGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVSADDLDADLE 333
            GN  G PR  QGR GA                               + +SA+DLDADL+
Sbjct: 180  GNSNGVPRGGQGRGGAF-----RRLRGGGGGGGRGFGRGRGRGRERNEKISAEDLDADLD 234

Query: 332  KYH---SEAMQTN 303
            KY+   SEAMQTN
Sbjct: 235  KYYSEASEAMQTN 247


>ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isoform X1 [Citrus sinensis]
          Length = 247

 Score =  282 bits (722), Expect = 4e-73
 Identities = 158/253 (62%), Positives = 174/253 (68%), Gaps = 4/253 (1%)
 Frame = -2

Query: 1049 SNLDKSLDDIIKMNKSSGGSNPRGRARNSGPGPSRRFQNRTANRMAPYPTANVQAPDAKW 870
            S LD SLDDIIK NK SG  N RGR R SGPGP+RR  NR ANR+APY TA  +AP+  W
Sbjct: 3    SALDMSLDDIIKNNKKSGSGNFRGRGRGSGPGPARRIPNRGANRVAPYTTA--KAPETTW 60

Query: 869  QHDMFTDHAAAFPVPLA-RVSGIETGTKLVISNLEYGVSDEDIKELFAEVGDIKRYSIHY 693
            QHDMF D  +AFPV  A R S IETGTKL ISNL+YGVS+EDIKELF+EVGD+KRYSIHY
Sbjct: 61   QHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHY 120

Query: 692  DRSGRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPAFVTPATNVMY 513
            DRSGRSKGTAEVV+SRR DA AAVKRYN VQLDGKPMKIEIVG NIA      PA NV +
Sbjct: 121  DRSGRSKGTAEVVYSRRADAVAAVKRYNTVQLDGKPMKIEIVGTNIATRT-AAPAANVNF 179

Query: 512  GNQTGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVSADDLDADLE 333
            GN  G PR  QGR GA                               + +SA+DLDADL+
Sbjct: 180  GNSNGVPRGGQGRGGAF-----RRLRGGGGGGGRGFGRGRGRGRERNEKISAEDLDADLD 234

Query: 332  KYH---SEAMQTN 303
            KY+   SEAMQTN
Sbjct: 235  KYYSEASEAMQTN 247


>ref|XP_012471387.1| PREDICTED: THO complex subunit 4A [Gossypium raimondii]
            gi|763752760|gb|KJB20148.1| hypothetical protein
            B456_003G135200 [Gossypium raimondii]
            gi|763752761|gb|KJB20149.1| hypothetical protein
            B456_003G135200 [Gossypium raimondii]
            gi|763752762|gb|KJB20150.1| hypothetical protein
            B456_003G135200 [Gossypium raimondii]
          Length = 241

 Score =  281 bits (719), Expect = 8e-73
 Identities = 150/249 (60%), Positives = 173/249 (69%)
 Frame = -2

Query: 1049 SNLDKSLDDIIKMNKSSGGSNPRGRARNSGPGPSRRFQNRTANRMAPYPTANVQAPDAKW 870
            S L+ SLDD+IK N+ SG  NPRGR R SGPGP+RRF NR ANR APY  A   AP+  W
Sbjct: 3    SALEMSLDDLIKRNRKSGSGNPRGRGRGSGPGPARRFPNRGANRSAPYTAAT--APETTW 60

Query: 869  QHDMFTDHAAAFPVPLARVSGIETGTKLVISNLEYGVSDEDIKELFAEVGDIKRYSIHYD 690
            QHDM++D  AAF     R + IETGTKL +SNL+YGVS++DIKELF+EVGD+KRY+IHYD
Sbjct: 61   QHDMYSDKGAAFQGQAGRAAAIETGTKLYVSNLDYGVSNDDIKELFSEVGDLKRYAIHYD 120

Query: 689  RSGRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPAFVTPATNVMYG 510
             +GRSKGTAEVVFSR+ DA AAVKRYNNVQLDGKPMKIEIVG NIA PA  T A NV +G
Sbjct: 121  WTGRSKGTAEVVFSRKADAMAAVKRYNNVQLDGKPMKIEIVGTNIATPAAPTVA-NVAFG 179

Query: 509  NQTGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVSADDLDADLEK 330
            +  GAPR  +GR G                                + VSA+DLDADLEK
Sbjct: 180  SSNGAPRGGRGRGGGFRRQRGVAGGRGFGRGRGQGRGRG-------EKVSAEDLDADLEK 232

Query: 329  YHSEAMQTN 303
            YH+EAMQTN
Sbjct: 233  YHTEAMQTN 241


>ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
            gi|571488643|ref|XP_006590992.1| PREDICTED: THO complex
            subunit 4-like isoform X2 [Glycine max]
            gi|947081040|gb|KRH29829.1| hypothetical protein
            GLYMA_11G141500 [Glycine max] gi|947081041|gb|KRH29830.1|
            hypothetical protein GLYMA_11G141500 [Glycine max]
          Length = 247

 Score =  280 bits (715), Expect = 2e-72
 Identities = 154/250 (61%), Positives = 172/250 (68%), Gaps = 3/250 (1%)
 Frame = -2

Query: 1043 LDKSLDDIIKMNKSSGGSNPRGRARNSGPGPSRRFQNRTANRMAPYPTANVQAPDAKWQH 864
            +D SLDDIIK NK SG  + RGR R SG GPSRRF NR ANR APY TA  +AP+A WQH
Sbjct: 5    MDMSLDDIIKNNKKSGSGSSRGRIRPSGSGPSRRFPNRAANRAAPYATA--KAPEATWQH 62

Query: 863  DMFTDH---AAAFPVPLARVSGIETGTKLVISNLEYGVSDEDIKELFAEVGDIKRYSIHY 693
            D++ D    AA +P    R + IETGTKL ISNL+YGVS +DIKELFAEVGD+KR+++HY
Sbjct: 63   DLYADQQVAAAGYPAQGGRAASIETGTKLYISNLDYGVSSDDIKELFAEVGDLKRHAVHY 122

Query: 692  DRSGRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPAFVTPATNVMY 513
            DRSGRSKGTAEVVFSRR DA AAVKRYNNVQLDGKPMKIEIVG NI+ P  V PA N   
Sbjct: 123  DRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNISTPG-VAPARNGAI 181

Query: 512  GNQTGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVSADDLDADLE 333
            GN  G PRS QGR GA+                              + VSADDLDADLE
Sbjct: 182  GNFDGVPRSGQGRGGALRRPGGRGQGVRRDRGRGRGRGGAGRG----EKVSADDLDADLE 237

Query: 332  KYHSEAMQTN 303
            KYH+EAMQ N
Sbjct: 238  KYHAEAMQLN 247


>ref|XP_010092777.1| RNA and export factor-binding protein 2 [Morus notabilis]
            gi|587862438|gb|EXB52242.1| RNA and export factor-binding
            protein 2 [Morus notabilis]
          Length = 248

 Score =  279 bits (713), Expect = 4e-72
 Identities = 150/248 (60%), Positives = 165/248 (66%), Gaps = 1/248 (0%)
 Frame = -2

Query: 1043 LDKSLDDIIKMNKSSGGSNPRGRARNSG-PGPSRRFQNRTANRMAPYPTANVQAPDAKWQ 867
            L  SLDDIIK NK +G  NPRGR R SG PGP+RR  NR  NR APY  A  +AP+  WQ
Sbjct: 5    LSMSLDDIIKTNKKTGSGNPRGRGRLSGGPGPARRVPNRAPNRAAPYAAAP-KAPETTWQ 63

Query: 866  HDMFTDHAAAFPVPLARVSGIETGTKLVISNLEYGVSDEDIKELFAEVGDIKRYSIHYDR 687
            HDM+ D   AF     R S I+TGTKL ISNLEYGVS+EDIKELF+EVGD+KRY+IHYDR
Sbjct: 64   HDMYMDQGTAFAAQAGRASAIQTGTKLYISNLEYGVSNEDIKELFSEVGDLKRYAIHYDR 123

Query: 686  SGRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPAFVTPATNVMYGN 507
            SGRSKGTAEVVFSRR DA AAVKRYNNVQLDGKPMKIEIVG N+A PA   P  N  +GN
Sbjct: 124  SGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNVATPAAPPPPANGSFGN 183

Query: 506  QTGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVSADDLDADLEKY 327
              G PR  QGR G                                + +SADDLDADLEKY
Sbjct: 184  SNGLPRGGQGRGGGAFGRPRGGGGGGRGPRRGRGRGQGRGTG---EKISADDLDADLEKY 240

Query: 326  HSEAMQTN 303
            H+EAMQ N
Sbjct: 241  HAEAMQEN 248


>ref|XP_007016490.1| RNA-binding family protein [Theobroma cacao]
            gi|508786853|gb|EOY34109.1| RNA-binding family protein
            [Theobroma cacao]
          Length = 241

 Score =  279 bits (713), Expect = 4e-72
 Identities = 150/249 (60%), Positives = 169/249 (67%)
 Frame = -2

Query: 1049 SNLDKSLDDIIKMNKSSGGSNPRGRARNSGPGPSRRFQNRTANRMAPYPTANVQAPDAKW 870
            S L+ SLDD+IK N+ SG  N RGR R SGPGP+RRF NR ANR  PY  A  +AP+  W
Sbjct: 3    SALEMSLDDLIKRNRKSGSGNSRGRGRGSGPGPARRFPNRGANRSGPYTAA--KAPETTW 60

Query: 869  QHDMFTDHAAAFPVPLARVSGIETGTKLVISNLEYGVSDEDIKELFAEVGDIKRYSIHYD 690
            QHDM++D  AAF     R S IETGTKL ISNL+YGVS++DIKELFAEVGD+KR++IHYD
Sbjct: 61   QHDMYSDKGAAFQGQAGRASAIETGTKLYISNLDYGVSNDDIKELFAEVGDLKRFTIHYD 120

Query: 689  RSGRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPAFVTPATNVMYG 510
            RSGRSKGTAEVVFSRR DA AAVKRYNNVQLDGKPMKIEIVG N+A P     A N  +G
Sbjct: 121  RSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPMKIEIVGTNVATPG-APSAGNGAFG 179

Query: 509  NQTGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVSADDLDADLEK 330
            N  GAPR   GR G                                + VSA+DLDA+LEK
Sbjct: 180  NSNGAPRGGHGRGGGFGKQRGGGGGRGFGRGRGRGKGRG-------EKVSAEDLDAELEK 232

Query: 329  YHSEAMQTN 303
            YHSEAMQTN
Sbjct: 233  YHSEAMQTN 241


>gb|KHN21975.1| RNA and export factor-binding protein 2 [Glycine soja]
          Length = 247

 Score =  276 bits (707), Expect = 2e-71
 Identities = 152/250 (60%), Positives = 171/250 (68%), Gaps = 3/250 (1%)
 Frame = -2

Query: 1043 LDKSLDDIIKMNKSSGGSNPRGRARNSGPGPSRRFQNRTANRMAPYPTANVQAPDAKWQH 864
            +D SLDDIIK NK SG  + RGR R SG GP+RR  NR ANR APY TA  +AP+A WQH
Sbjct: 5    MDMSLDDIIKNNKKSGSGSSRGRTRPSGSGPTRRLPNRAANRAAPYATA--KAPEATWQH 62

Query: 863  DMFTDH---AAAFPVPLARVSGIETGTKLVISNLEYGVSDEDIKELFAEVGDIKRYSIHY 693
            D++ D    AA +P    R + IETGTKL ISNL+YGVS +DIKELFAEVGD+KR+++HY
Sbjct: 63   DLYADQQVAAAGYPAQGGRAASIETGTKLYISNLDYGVSSDDIKELFAEVGDLKRHAVHY 122

Query: 692  DRSGRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPAFVTPATNVMY 513
            DRSGRSKGTAEVVFSRR DA AAVKRYNNVQLDGKPMKIEIVG NI+ P  V PA N   
Sbjct: 123  DRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNISTPG-VAPARNGAI 181

Query: 512  GNQTGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVSADDLDADLE 333
            GN  G PRS QGR GA+                              + VSADDLDADLE
Sbjct: 182  GNFDGVPRSGQGRGGALRRPGGRGQGVRRDRGRGRGRGGAGRG----EKVSADDLDADLE 237

Query: 332  KYHSEAMQTN 303
            KYH+EAMQ N
Sbjct: 238  KYHAEAMQLN 247


>gb|KHN32110.1| RNA and export factor-binding protein 2 [Glycine soja]
          Length = 247

 Score =  276 bits (706), Expect = 3e-71
 Identities = 151/250 (60%), Positives = 172/250 (68%), Gaps = 3/250 (1%)
 Frame = -2

Query: 1043 LDKSLDDIIKMNKSSGGSNPRGRARNSGPGPSRRFQNRTANRMAPYPTANVQAPDAKWQH 864
            +D SLDDIIK NK SG  + RGR R SG GP+RR  NR ANR APY TA  +AP+A WQH
Sbjct: 5    MDMSLDDIIKNNKKSGSGSSRGRTRPSGSGPTRRLPNRAANRAAPYATA--KAPEATWQH 62

Query: 863  DMFTDH---AAAFPVPLARVSGIETGTKLVISNLEYGVSDEDIKELFAEVGDIKRYSIHY 693
            D++ D    AA +P    R + IETGTKL ISNL+YGVS++DIKELFAEVGD+KR+++HY
Sbjct: 63   DLYADQHVAAAGYPAQGGRAASIETGTKLYISNLDYGVSNDDIKELFAEVGDLKRHAVHY 122

Query: 692  DRSGRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPAFVTPATNVMY 513
            DRSGRSKGTAEVVFSRR DA +AVKRYNNVQLDGKPMKIEIVG NI+ P  V PA N   
Sbjct: 123  DRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVGTNISTPG-VAPAPNGAI 181

Query: 512  GNQTGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVSADDLDADLE 333
            GN  G PRS QGR GA+                              + VSADDLDADLE
Sbjct: 182  GNFNGVPRSGQGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRG----EKVSADDLDADLE 237

Query: 332  KYHSEAMQTN 303
            KYH+EAMQ N
Sbjct: 238  KYHAEAMQLN 247


>ref|XP_007205766.1| hypothetical protein PRUPE_ppa010358mg [Prunus persica]
            gi|462401408|gb|EMJ06965.1| hypothetical protein
            PRUPE_ppa010358mg [Prunus persica]
          Length = 252

 Score =  276 bits (706), Expect = 3e-71
 Identities = 149/249 (59%), Positives = 169/249 (67%), Gaps = 4/249 (1%)
 Frame = -2

Query: 1043 LDKSLDDIIKMNKSSGGSNPRGRARNSGPGPSRRFQNRTANRMAPYPTANVQAPDAKWQH 864
            L+ SLDD+IK +K SG  N RGR R SGPGP+RR  NR ANR  PY  A  +AP+  WQH
Sbjct: 5    LNMSLDDLIKTSKKSGSGNARGRGRASGPGPARRLPNRAANRTTPYAAA--KAPETAWQH 62

Query: 863  DMFTDH-AAAFPVPLARVSGIETGTKLVISNLEYGVSDEDIKELFAEVGDIKRYSIHYDR 687
            D++TD  AAAFP    R S IETGTKL ISNL+YGVS+EDIKELF+EVGD+KRY +HYDR
Sbjct: 63   DLYTDQGAAAFPAQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYGVHYDR 122

Query: 686  SGRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPA---FVTPATNVM 516
            SGRSKGTAEVVFSRR DA AAVKRYNNVQLDGKPMKIEIVG NI+ P     + PA N  
Sbjct: 123  SGRSKGTAEVVFSRRPDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGGPPTLPPAANGN 182

Query: 515  YGNQTGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVSADDLDADL 336
            +GN  G PR  Q R GA                             G + VSA+DLDA+L
Sbjct: 183  FGNSNGVPRGGQSRGGAFGRIRGGGGRGPRRGGRGRGSGNGGGRGRGGEKVSAEDLDAEL 242

Query: 335  EKYHSEAMQ 309
            EKYH+EAMQ
Sbjct: 243  EKYHAEAMQ 251


>ref|XP_008223173.1| PREDICTED: THO complex subunit 4A [Prunus mume]
          Length = 252

 Score =  274 bits (701), Expect = 1e-70
 Identities = 148/249 (59%), Positives = 168/249 (67%), Gaps = 4/249 (1%)
 Frame = -2

Query: 1043 LDKSLDDIIKMNKSSGGSNPRGRARNSGPGPSRRFQNRTANRMAPYPTANVQAPDAKWQH 864
            L+ SLDD+IK +K SG  N RGR R SGPGP+RR  NR ANR  PY  A  +AP+  WQH
Sbjct: 5    LNMSLDDLIKTSKKSGSGNARGRGRASGPGPARRLPNRAANRTTPYAAA--KAPETAWQH 62

Query: 863  DMFTDH-AAAFPVPLARVSGIETGTKLVISNLEYGVSDEDIKELFAEVGDIKRYSIHYDR 687
            D++ D  AAAFP    R S IETGTKL ISNL+YGVS+EDIKELF+EVGD+KRY +HYDR
Sbjct: 63   DLYADQGAAAFPAQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYGVHYDR 122

Query: 686  SGRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPA---FVTPATNVM 516
            SGRSKGTAEVVFSRR DA AAVKRYNNVQLDGKPMKIEIVG NI+ P     + PA N  
Sbjct: 123  SGRSKGTAEVVFSRRPDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGGPPTLPPAANGN 182

Query: 515  YGNQTGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVSADDLDADL 336
            +GN  G PR  Q R GA                             G + VSA+DLDA+L
Sbjct: 183  FGNSNGVPRGGQSRGGAFGRIRGGGGRGPRRGGRGRGSGNGGGRGRGGEKVSAEDLDAEL 242

Query: 335  EKYHSEAMQ 309
            EKYH+EAMQ
Sbjct: 243  EKYHAEAMQ 251


>gb|KHG01793.1| THO complex subunit 4 [Gossypium arboreum]
          Length = 241

 Score =  274 bits (700), Expect = 1e-70
 Identities = 150/249 (60%), Positives = 171/249 (68%)
 Frame = -2

Query: 1049 SNLDKSLDDIIKMNKSSGGSNPRGRARNSGPGPSRRFQNRTANRMAPYPTANVQAPDAKW 870
            S L+ SLDD+IK ++ SG  N RGR R SGPGP+RRF  R ANR  PY TA  +AP+  W
Sbjct: 3    SALEMSLDDLIKRSRKSGSGNSRGRGRGSGPGPARRFPKRRANRSTPYTTA--KAPETSW 60

Query: 869  QHDMFTDHAAAFPVPLARVSGIETGTKLVISNLEYGVSDEDIKELFAEVGDIKRYSIHYD 690
            QHDM++D  AAF     R S IETGTKL ISNL+YGVS++D+KELF+EVGD+KR++IHYD
Sbjct: 61   QHDMYSDKGAAFRGQAGRASAIETGTKLYISNLDYGVSNDDVKELFSEVGDLKRFTIHYD 120

Query: 689  RSGRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPAFVTPATNVMYG 510
            RSGRSKGTAEVVFSRR DA AAVKRYNNVQLDGKPMKIEIVG N++  A V  A N  +G
Sbjct: 121  RSGRSKGTAEVVFSRRADALAAVKRYNNVQLDGKPMKIEIVGANVSTTA-VPSAANGTFG 179

Query: 509  NQTGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVSADDLDADLEK 330
            N  GAPR  QGR                                GEK VS +DLDADLEK
Sbjct: 180  NSNGAPRGGQGR------GVGFGRQRGGVGGRGSGRGHGRGRGRGEK-VSTEDLDADLEK 232

Query: 329  YHSEAMQTN 303
            YHSEAMQTN
Sbjct: 233  YHSEAMQTN 241


>ref|XP_009628483.1| PREDICTED: THO complex subunit 4A-like isoform X1 [Nicotiana
            tomentosiformis]
          Length = 249

 Score =  274 bits (700), Expect = 1e-70
 Identities = 150/259 (57%), Positives = 172/259 (66%), Gaps = 9/259 (3%)
 Frame = -2

Query: 1052 MSNLDKSLDDIIKMNKSSGGSNPRGRARNSG-------PGPSRRFQNRTANRMAPYPTAN 894
            MSNLD SLDD+IK NKSS   NPR R   SG       PGP RRF NRTANR APY +  
Sbjct: 1    MSNLDVSLDDLIKRNKSSSSRNPRPRTSGSGSGSGSRGPGPRRRFPNRTANRPAPYSSGP 60

Query: 893  VQAPDAKWQHDMFTDHAAAFPVPLAR--VSGIETGTKLVISNLEYGVSDEDIKELFAEVG 720
            V AP++ W HDMF +HA A+P       +SGIETG KL+ISNL+YGVS+EDIKELF+E G
Sbjct: 61   VHAPESTWDHDMFAEHAPAYPAARGAGGISGIETGIKLLISNLDYGVSNEDIKELFSEAG 120

Query: 719  DIKRYSIHYDRSGRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPAF 540
            DIKRYSIHYD+SGRSKGTAEV+F+RR DAEAA+K+YNNVQLDGKPMKIE  G NI APA 
Sbjct: 121  DIKRYSIHYDKSGRSKGTAEVIFARRRDAEAAIKKYNNVQLDGKPMKIEFAGPNIGAPA- 179

Query: 539  VTPATNVMYGNQTGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVS 360
            + P  N +Y N   APRS Q   G                                + +S
Sbjct: 180  LPPIRNRLYRNPNPAPRSQQRGGG---------FRRPPRGGRGSMRKEGGRGRGRGENIS 230

Query: 359  ADDLDADLEKYHSEAMQTN 303
            A+DLDADLEKYHSEAM+TN
Sbjct: 231  AEDLDADLEKYHSEAMETN 249


>ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
            gi|571492362|ref|XP_006592205.1| PREDICTED: THO complex
            subunit 4-like isoform X2 [Glycine max]
          Length = 247

 Score =  274 bits (700), Expect = 1e-70
 Identities = 150/250 (60%), Positives = 171/250 (68%), Gaps = 3/250 (1%)
 Frame = -2

Query: 1043 LDKSLDDIIKMNKSSGGSNPRGRARNSGPGPSRRFQNRTANRMAPYPTANVQAPDAKWQH 864
            +D SLDDIIK NK SG  + RGR R SG GP+RR  NR ANR APY  A  +AP+A WQH
Sbjct: 5    MDMSLDDIIKNNKKSGSGSSRGRTRPSGSGPTRRLPNRAANRAAPYAPA--KAPEATWQH 62

Query: 863  DMFTDH---AAAFPVPLARVSGIETGTKLVISNLEYGVSDEDIKELFAEVGDIKRYSIHY 693
            D++ D    AA +P    R + IETGTKL ISNL+YGVS++DIKELFAEVGD+KR+++HY
Sbjct: 63   DLYADQHVAAAGYPAQGGRAASIETGTKLYISNLDYGVSNDDIKELFAEVGDLKRHAVHY 122

Query: 692  DRSGRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPAFVTPATNVMY 513
            DRSGRSKGTAEVVFSRR DA +AVKRYNNVQLDGKPMKIEIVG NI+ P  V PA N   
Sbjct: 123  DRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVGTNISTPG-VAPAPNGAI 181

Query: 512  GNQTGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVSADDLDADLE 333
            GN  G PRS QGR GA+                              + VSADDLDADLE
Sbjct: 182  GNFNGVPRSGQGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRG----EKVSADDLDADLE 237

Query: 332  KYHSEAMQTN 303
            KYH+EAMQ N
Sbjct: 238  KYHAEAMQLN 247


>ref|XP_007027070.1| RNA-binding family protein [Theobroma cacao]
            gi|508715675|gb|EOY07572.1| RNA-binding family protein
            [Theobroma cacao]
          Length = 240

 Score =  270 bits (691), Expect = 1e-69
 Identities = 151/246 (61%), Positives = 164/246 (66%)
 Frame = -2

Query: 1043 LDKSLDDIIKMNKSSGGSNPRGRARNSGPGPSRRFQNRTANRMAPYPTANVQAPDAKWQH 864
            LD SLDD+IK N+ SG +  R    NSG GPSRRF NR ANR APY +  VQAPD  WQH
Sbjct: 5    LDMSLDDLIKSNRKSGLTRTRPPL-NSGNGPSRRFPNRAANRTAPY-SKPVQAPDTTWQH 62

Query: 863  DMFTDHAAAFPVPLARVSGIETGTKLVISNLEYGVSDEDIKELFAEVGDIKRYSIHYDRS 684
            DMF D  A FP    R S IETGTKL ISNL+YGVS+EDIKELF+EVGD+KRYS+HYDRS
Sbjct: 63   DMFVDDGAGFPSAAGRASSIETGTKLYISNLDYGVSNEDIKELFSEVGDMKRYSVHYDRS 122

Query: 683  GRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPAFVTPATNVMYGNQ 504
            GRSKGTAEVVFSRR DA  A KRYN VQLDGKPMKIEIVG N+A P  + PATN  + N 
Sbjct: 123  GRSKGTAEVVFSRRTDAAVAFKRYNGVQLDGKPMKIEIVGTNVATPVALPPATNGKFANP 182

Query: 503  TGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVSADDLDADLEKYH 324
             G PRS QGR                                GEK VSA+DLDADLE YH
Sbjct: 183  NGVPRSGQGR--------GSFSGRSRGPGRGARRGRGQGRGQGEK-VSAEDLDADLENYH 233

Query: 323  SEAMQT 306
             EAMQT
Sbjct: 234  KEAMQT 239


>ref|XP_012474521.1| PREDICTED: THO complex subunit 4A-like [Gossypium raimondii]
            gi|763741358|gb|KJB08857.1| hypothetical protein
            B456_001G108500 [Gossypium raimondii]
            gi|763741359|gb|KJB08858.1| hypothetical protein
            B456_001G108500 [Gossypium raimondii]
            gi|763741360|gb|KJB08859.1| hypothetical protein
            B456_001G108500 [Gossypium raimondii]
            gi|763741362|gb|KJB08861.1| hypothetical protein
            B456_001G108500 [Gossypium raimondii]
            gi|763741363|gb|KJB08862.1| hypothetical protein
            B456_001G108500 [Gossypium raimondii]
          Length = 241

 Score =  270 bits (689), Expect = 2e-69
 Identities = 147/249 (59%), Positives = 166/249 (66%)
 Frame = -2

Query: 1049 SNLDKSLDDIIKMNKSSGGSNPRGRARNSGPGPSRRFQNRTANRMAPYPTANVQAPDAKW 870
            S L+ SLDD+IK ++ SG  N RGR R S  GP+RR  NR ANR APY  A  +AP+  W
Sbjct: 3    SALEMSLDDLIKRSRKSGSGNSRGRGRGSTAGPARRIPNRRANRSAPYTAA--KAPETMW 60

Query: 869  QHDMFTDHAAAFPVPLARVSGIETGTKLVISNLEYGVSDEDIKELFAEVGDIKRYSIHYD 690
            QHDM++D  +A      R S IETGTKL ISNL+YGVS++DIKELF+EVGD+KRY IHYD
Sbjct: 61   QHDMYSDKGSALQGQAGRASAIETGTKLYISNLDYGVSNDDIKELFSEVGDLKRYGIHYD 120

Query: 689  RSGRSKGTAEVVFSRRLDAEAAVKRYNNVQLDGKPMKIEIVGRNIAAPAFVTPATNVMYG 510
            RSGRSKGTAEVVFSRR DA AAVKRYNNVQLDGKPMKIEIVG NIA P     A N  +G
Sbjct: 121  RSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPMKIEIVGTNIATPT-APSAANGTFG 179

Query: 509  NQTGAPRSNQGRVGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVVSADDLDADLEK 330
            +  GAPR  QGR G                                + VSA+DLDADLEK
Sbjct: 180  SSNGAPRGGQGRGGGFGRQRGGAGGRGFGRGRGQGKGRG-------EKVSAEDLDADLEK 232

Query: 329  YHSEAMQTN 303
            YHSEAMQTN
Sbjct: 233  YHSEAMQTN 241