BLASTX nr result
ID: Cornus23_contig00006948
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00006948
(400 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KHN47080.1| Splicing factor U2af large subunit B [Glycine soja] 61 3e-15
ref|XP_012572879.1| PREDICTED: splicing factor U2af large subuni... 73 5e-14
ref|XP_011656487.1| PREDICTED: splicing factor U2af large subuni... 50 2e-09
ref|XP_008445603.1| PREDICTED: splicing factor U2af large subuni... 50 3e-09
ref|XP_011656485.1| PREDICTED: splicing factor U2af large subuni... 48 1e-08
ref|XP_008445601.1| PREDICTED: splicing factor U2af large subuni... 48 1e-08
ref|XP_008445602.1| PREDICTED: splicing factor U2af large subuni... 48 1e-08
ref|XP_011656494.1| PREDICTED: splicing factor U2af large subuni... 48 4e-08
ref|XP_011656488.1| PREDICTED: splicing factor U2af large subuni... 48 4e-08
ref|XP_008445609.1| PREDICTED: splicing factor U2af large subuni... 48 5e-08
ref|XP_010649167.1| PREDICTED: splicing factor U2af large subuni... 64 6e-08
ref|XP_010649166.1| PREDICTED: splicing factor U2af large subuni... 61 4e-07
ref|XP_010244306.1| PREDICTED: splicing factor U2af large subuni... 57 4e-06
ref|XP_008338129.1| PREDICTED: splicing factor U2af large subuni... 57 5e-06
ref|XP_008338128.1| PREDICTED: splicing factor U2af large subuni... 57 5e-06
ref|XP_010254910.1| PREDICTED: splicing factor U2af large subuni... 56 9e-06
>gb|KHN47080.1| Splicing factor U2af large subunit B [Glycine soja]
Length = 653
Score = 61.2 bits (147), Expect(2) = 3e-15
Identities = 30/44 (68%), Positives = 32/44 (72%)
Frame = +3
Query: 129 VWKVRIELHGVILAMLGY*PHCADNGREPTSVALMYKEESMHQF 260
VWK+ I+LHGV L PHCADNGREPTSVA M EESMH F
Sbjct: 217 VWKIHIKLHGVNL------PHCADNGREPTSVAFMSTEESMHLF 254
Score = 47.0 bits (110), Expect(2) = 3e-15
Identities = 27/55 (49%), Positives = 30/55 (54%)
Frame = +1
Query: 235 TRKNQCTSLMGLVRLQPATIACFGXXXXXXXXXXXXCQIPGTTPTIPGMFPNMFP 399
T ++ L+GLVRLQ TI FG QI G PTIPGMFPNMFP
Sbjct: 247 TEESMHLFLVGLVRLQLETITYFG-------------QITGANPTIPGMFPNMFP 288
>ref|XP_012572879.1| PREDICTED: splicing factor U2af large subunit A-like isoform X5
[Cicer arietinum]
Length = 636
Score = 72.8 bits (177), Expect(2) = 5e-14
Identities = 36/49 (73%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Frame = +3
Query: 117 ACCIVW-KVRIELHGVILAMLGY*PHCADNGREPTSVALMYKEESMHQF 260
A VW KV I+LH VI AMLGY PHCADNGREPTSVA M KEES+H+F
Sbjct: 191 AAVTVWEKVHIKLHAVIWAMLGYLPHCADNGREPTSVAFMSKEESVHRF 239
Score = 31.2 bits (69), Expect(2) = 5e-14
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +1
Query: 259 LMGLVRLQPATIACFGXXXXXXXXXXXXCQIPGTTPTIPGMFPNMFP 399
L+GLVRLQ TI+ I + PTIPG+ NMFP
Sbjct: 240 LVGLVRLQLETISTL-------------VDINASNPTIPGVLQNMFP 273
>ref|XP_011656487.1| PREDICTED: splicing factor U2af large subunit A isoform X2 [Cucumis
sativus]
Length = 622
Score = 50.4 bits (119), Expect(2) = 2e-09
Identities = 27/54 (50%), Positives = 30/54 (55%)
Frame = +1
Query: 238 RKNQCTSLMGLVRLQPATIACFGXXXXXXXXXXXXCQIPGTTPTIPGMFPNMFP 399
+K+QCT M LVRL T + G QIPGTTP IPGMFP MFP
Sbjct: 222 KKDQCTGQMDLVRLHLETYSFLG-------------QIPGTTPAIPGMFPTMFP 262
Score = 37.7 bits (86), Expect(2) = 2e-09
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +3
Query: 159 VILAMLGY*PHCADNGREPTSVALMYKEE 245
++ AML Y P CADNGRE TSVA M K++
Sbjct: 196 LLQAMLDYLPLCADNGRELTSVAFMCKKD 224
>ref|XP_008445603.1| PREDICTED: splicing factor U2af large subunit A-like isoform X3
[Cucumis melo]
Length = 622
Score = 50.1 bits (118), Expect(2) = 3e-09
Identities = 27/54 (50%), Positives = 30/54 (55%)
Frame = +1
Query: 238 RKNQCTSLMGLVRLQPATIACFGXXXXXXXXXXXXCQIPGTTPTIPGMFPNMFP 399
+K+QCTS M LVRL T + G QIPG TP IPGMFP MFP
Sbjct: 222 KKDQCTSQMDLVRLHLETYSFLG-------------QIPGATPAIPGMFPTMFP 262
Score = 37.7 bits (86), Expect(2) = 3e-09
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +3
Query: 159 VILAMLGY*PHCADNGREPTSVALMYKEE 245
++ AML Y P CADNGRE TSVA M K++
Sbjct: 196 LLQAMLDYLPLCADNGRELTSVAFMCKKD 224
>ref|XP_011656485.1| PREDICTED: splicing factor U2af large subunit A isoform X1 [Cucumis
sativus]
Length = 623
Score = 48.1 bits (113), Expect(2) = 1e-08
Identities = 26/54 (48%), Positives = 29/54 (53%)
Frame = +1
Query: 238 RKNQCTSLMGLVRLQPATIACFGXXXXXXXXXXXXCQIPGTTPTIPGMFPNMFP 399
+K+QCT M LVRL T + QIPGTTP IPGMFP MFP
Sbjct: 222 KKDQCTGQMDLVRLHLETYSFLAG------------QIPGTTPAIPGMFPTMFP 263
Score = 37.7 bits (86), Expect(2) = 1e-08
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +3
Query: 159 VILAMLGY*PHCADNGREPTSVALMYKEE 245
++ AML Y P CADNGRE TSVA M K++
Sbjct: 196 LLQAMLDYLPLCADNGRELTSVAFMCKKD 224
>ref|XP_008445601.1| PREDICTED: splicing factor U2af large subunit A-like isoform X1
[Cucumis melo]
Length = 623
Score = 47.8 bits (112), Expect(2) = 1e-08
Identities = 26/54 (48%), Positives = 29/54 (53%)
Frame = +1
Query: 238 RKNQCTSLMGLVRLQPATIACFGXXXXXXXXXXXXCQIPGTTPTIPGMFPNMFP 399
+K+QCTS M LVRL T + QIPG TP IPGMFP MFP
Sbjct: 222 KKDQCTSQMDLVRLHLETYSFLAG------------QIPGATPAIPGMFPTMFP 263
Score = 37.7 bits (86), Expect(2) = 1e-08
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +3
Query: 159 VILAMLGY*PHCADNGREPTSVALMYKEE 245
++ AML Y P CADNGRE TSVA M K++
Sbjct: 196 LLQAMLDYLPLCADNGRELTSVAFMCKKD 224
>ref|XP_008445602.1| PREDICTED: splicing factor U2af large subunit A-like isoform X2
[Cucumis melo]
Length = 622
Score = 47.8 bits (112), Expect(2) = 1e-08
Identities = 26/54 (48%), Positives = 29/54 (53%)
Frame = +1
Query: 238 RKNQCTSLMGLVRLQPATIACFGXXXXXXXXXXXXCQIPGTTPTIPGMFPNMFP 399
+K+QCTS M LVRL T + QIPG TP IPGMFP MFP
Sbjct: 222 KKDQCTSQMDLVRLHLETYSFLAG------------QIPGATPAIPGMFPTMFP 263
Score = 37.7 bits (86), Expect(2) = 1e-08
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +3
Query: 159 VILAMLGY*PHCADNGREPTSVALMYKEE 245
++ AML Y P CADNGRE TSVA M K++
Sbjct: 196 LLQAMLDYLPLCADNGRELTSVAFMCKKD 224
>ref|XP_011656494.1| PREDICTED: splicing factor U2af large subunit B isoform X10
[Cucumis sativus] gi|778709984|ref|XP_011656495.1|
PREDICTED: splicing factor U2af large subunit B isoform
X10 [Cucumis sativus]
Length = 424
Score = 48.1 bits (113), Expect(2) = 4e-08
Identities = 26/54 (48%), Positives = 29/54 (53%)
Frame = +1
Query: 238 RKNQCTSLMGLVRLQPATIACFGXXXXXXXXXXXXCQIPGTTPTIPGMFPNMFP 399
+K+QCT M LVRL T + QIPGTTP IPGMFP MFP
Sbjct: 23 KKDQCTGQMDLVRLHLETYSFLAG------------QIPGTTPAIPGMFPTMFP 64
Score = 35.8 bits (81), Expect(2) = 4e-08
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3
Query: 171 MLGY*PHCADNGREPTSVALMYKEE 245
ML Y P CADNGRE TSVA M K++
Sbjct: 1 MLDYLPLCADNGRELTSVAFMCKKD 25
>ref|XP_011656488.1| PREDICTED: splicing factor U2af large subunit B isoform X3 [Cucumis
sativus]
Length = 423
Score = 48.1 bits (113), Expect(2) = 4e-08
Identities = 26/54 (48%), Positives = 29/54 (53%)
Frame = +1
Query: 238 RKNQCTSLMGLVRLQPATIACFGXXXXXXXXXXXXCQIPGTTPTIPGMFPNMFP 399
+K+QCT M LVRL T + QIPGTTP IPGMFP MFP
Sbjct: 23 KKDQCTGQMDLVRLHLETYSFLAG------------QIPGTTPAIPGMFPTMFP 64
Score = 35.8 bits (81), Expect(2) = 4e-08
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3
Query: 171 MLGY*PHCADNGREPTSVALMYKEE 245
ML Y P CADNGRE TSVA M K++
Sbjct: 1 MLDYLPLCADNGRELTSVAFMCKKD 25
>ref|XP_008445609.1| PREDICTED: splicing factor U2af large subunit B-like isoform X8
[Cucumis melo]
Length = 424
Score = 47.8 bits (112), Expect(2) = 5e-08
Identities = 26/54 (48%), Positives = 29/54 (53%)
Frame = +1
Query: 238 RKNQCTSLMGLVRLQPATIACFGXXXXXXXXXXXXCQIPGTTPTIPGMFPNMFP 399
+K+QCTS M LVRL T + QIPG TP IPGMFP MFP
Sbjct: 23 KKDQCTSQMDLVRLHLETYSFLAG------------QIPGATPAIPGMFPTMFP 64
Score = 35.8 bits (81), Expect(2) = 5e-08
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3
Query: 171 MLGY*PHCADNGREPTSVALMYKEE 245
ML Y P CADNGRE TSVA M K++
Sbjct: 1 MLDYLPLCADNGRELTSVAFMCKKD 25
>ref|XP_010649167.1| PREDICTED: splicing factor U2af large subunit B isoform X4 [Vitis
vinifera] gi|297735185|emb|CBI17547.3| unnamed protein
product [Vitis vinifera]
Length = 393
Score = 63.5 bits (153), Expect = 6e-08
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = +1
Query: 262 MGLVRLQPATIACFGXXXXXXXXXXXXCQIPGTTPTIPGMFPNMFP 399
MGLVRLQPA+IACFG QIPGTTPTIPGMFPNMFP
Sbjct: 1 MGLVRLQPASIACFG-------------QIPGTTPTIPGMFPNMFP 33
>ref|XP_010649166.1| PREDICTED: splicing factor U2af large subunit B isoform X3 [Vitis
vinifera]
Length = 396
Score = 60.8 bits (146), Expect = 4e-07
Identities = 31/46 (67%), Positives = 32/46 (69%)
Frame = +1
Query: 262 MGLVRLQPATIACFGXXXXXXXXXXXXCQIPGTTPTIPGMFPNMFP 399
MGLVRLQPA+IACF QIPGTTPTIPGMFPNMFP
Sbjct: 1 MGLVRLQPASIACFDFTG----------QIPGTTPTIPGMFPNMFP 36
>ref|XP_010244306.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
[Nelumbo nucifera]
Length = 391
Score = 57.4 bits (137), Expect = 4e-06
Identities = 29/46 (63%), Positives = 30/46 (65%)
Frame = +1
Query: 262 MGLVRLQPATIACFGXXXXXXXXXXXXCQIPGTTPTIPGMFPNMFP 399
M LVRLQPA I CFG Q+PGTTPTIPGMFPNMFP
Sbjct: 1 MDLVRLQPAPITCFG-------------QMPGTTPTIPGMFPNMFP 33
>ref|XP_008338129.1| PREDICTED: splicing factor U2af large subunit B isoform X5 [Malus
domestica]
Length = 395
Score = 57.0 bits (136), Expect = 5e-06
Identities = 30/46 (65%), Positives = 31/46 (67%)
Frame = +1
Query: 262 MGLVRLQPATIACFGXXXXXXXXXXXXCQIPGTTPTIPGMFPNMFP 399
M LVRLQPATIA FG QIPGT+PTIPGMFPNMFP
Sbjct: 1 MDLVRLQPATIAVFG-------------QIPGTSPTIPGMFPNMFP 33
>ref|XP_008338128.1| PREDICTED: splicing factor U2af large subunit B isoform X4 [Malus
domestica]
Length = 396
Score = 57.0 bits (136), Expect = 5e-06
Identities = 30/46 (65%), Positives = 31/46 (67%)
Frame = +1
Query: 262 MGLVRLQPATIACFGXXXXXXXXXXXXCQIPGTTPTIPGMFPNMFP 399
M LVRLQPATIA FG QIPGT+PTIPGMFPNMFP
Sbjct: 1 MDLVRLQPATIAVFG-------------QIPGTSPTIPGMFPNMFP 33
>ref|XP_010254910.1| PREDICTED: splicing factor U2af large subunit B isoform X2 [Nelumbo
nucifera]
Length = 391
Score = 56.2 bits (134), Expect = 9e-06
Identities = 29/46 (63%), Positives = 30/46 (65%)
Frame = +1
Query: 262 MGLVRLQPATIACFGXXXXXXXXXXXXCQIPGTTPTIPGMFPNMFP 399
M LVRLQPATIA FG Q+PGTTP IPGMFPNMFP
Sbjct: 1 MDLVRLQPATIASFG-------------QVPGTTPAIPGMFPNMFP 33