BLASTX nr result
ID: Cornus23_contig00006567
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00006567
(3082 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prun... 1140 0.0
ref|XP_008224429.1| PREDICTED: chloroplastic group IIA intron sp... 1129 0.0
ref|XP_010278131.1| PREDICTED: chloroplastic group IIA intron sp... 1127 0.0
ref|XP_010278136.1| PREDICTED: chloroplastic group IIA intron sp... 1124 0.0
ref|XP_010278134.1| PREDICTED: chloroplastic group IIA intron sp... 1124 0.0
ref|XP_010278130.1| PREDICTED: chloroplastic group IIA intron sp... 1124 0.0
ref|XP_008362021.1| PREDICTED: chloroplastic group IIA intron sp... 1120 0.0
ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp... 1118 0.0
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera] 1118 0.0
ref|XP_008362022.1| PREDICTED: chloroplastic group IIA intron sp... 1110 0.0
ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma ca... 1103 0.0
ref|XP_008391092.1| PREDICTED: chloroplastic group IIA intron sp... 1102 0.0
ref|XP_011091130.1| PREDICTED: chloroplastic group IIA intron sp... 1095 0.0
emb|CDO99162.1| unnamed protein product [Coffea canephora] 1083 0.0
ref|XP_012473005.1| PREDICTED: chloroplastic group IIA intron sp... 1073 0.0
gb|KHG05234.1| Chloroplastic group IIA intron splicing facilitat... 1070 0.0
ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron sp... 1069 0.0
ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma ca... 1066 0.0
ref|XP_011030575.1| PREDICTED: chloroplastic group IIA intron sp... 1064 0.0
ref|XP_009614939.1| PREDICTED: chloroplastic group IIA intron sp... 1064 0.0
>ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
gi|462423956|gb|EMJ28219.1| hypothetical protein
PRUPE_ppa001134mg [Prunus persica]
Length = 899
Score = 1140 bits (2948), Expect = 0.0
Identities = 598/892 (67%), Positives = 714/892 (80%), Gaps = 10/892 (1%)
Frame = -3
Query: 2975 MALVPSRQFYPTTTFLDSFQSSYKVHLTTRLQLLRYGCSIPFKKQNFYVSHNTINSNSSP 2796
M LVPSRQ YPT+ F DSFQSS+ + L R G SIPFKK FY +H TI+S +P
Sbjct: 1 MTLVPSRQLYPTSLF-DSFQSSFSKFHGPHIHLFRCGSSIPFKKHTFYATHYTISSTLNP 59
Query: 2795 RS----KSNFMLKSGNSRWGFANETPISQSNPSVSLSRNSWVDKWNETHQQNQPKLPRPV 2628
KSNF+ K+ PISQ P + S +SW+DKWNE+H+ N+PK PR V
Sbjct: 60 EQNPLRKSNFVRKN----------QPISQYKPKKNFSSSSWIDKWNESHKHNRPKPPRAV 109
Query: 2627 FNYRNS--GNLLSCGYERNNTXXXXXXS--TMERIVEKLKKFGYIDDVNEKKDKV-DRVI 2463
+Y++S GNL GY + S TME+IVEKLKKFGY+DD NE K +V D VI
Sbjct: 110 LDYQSSESGNLSGSGYAEGDGGGGRNSSGSTMEKIVEKLKKFGYVDDSNENKGEVRDSVI 169
Query: 2462 EKGSVEDIFYVEEGMLPNAKGGFSEESPLGVENVLGNGEEVRFPWEKPMVKEEEEKSFSV 2283
EKGSVEDIFY+EEGMLPN++GGFSEESPLG+ENV G +VRFPWEKP +E++E+ SV
Sbjct: 170 EKGSVEDIFYIEEGMLPNSRGGFSEESPLGIENVFGGDGKVRFPWEKPKEEEKQEEG-SV 228
Query: 2282 RQKSRTSLAELTLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEIVRLK 2103
R+KSRTSLAELTLPESE+RRLTNL + K++T+IGG GVTQ++V++IH++WK SEIVRLK
Sbjct: 229 RRKSRTSLAELTLPESELRRLTNLTFQKKHKTRIGGGGVTQAVVEMIHERWKTSEIVRLK 288
Query: 2102 IEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLRLTKRTYIKNDVPRN 1923
IEG PALNMKRMHEILERKTGGLVIWRSGTS+SLYRG+++EVPS++L KR Y KND+
Sbjct: 289 IEGPPALNMKRMHEILERKTGGLVIWRSGTSLSLYRGVSYEVPSVKLNKRIYKKNDISSA 348
Query: 1922 SISTATDKTSGIASE-SPCNAVHAPQTDSENTVEQEKNSESLPEVEYEDEVDRLLDGLGP 1746
+ T DK+ G +E + + V PQ SENT ++++++E L EV+YEDEVD+LLD LGP
Sbjct: 349 PLPTVADKSVGDFAELASYSNVKTPQEKSENTSQEKEDTEQLAEVKYEDEVDKLLDSLGP 408
Query: 1745 RYVDWPGGDPLPVDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPPHFA 1566
R+ DWPG DPLPVDAD+LPGI+ GYQPPFR+LPYGVRSTLG+KEAT+LRRLARV+PPHFA
Sbjct: 409 RFKDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLGLKEATSLRRLARVLPPHFA 468
Query: 1565 LGRSRQHQGLAVAMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNKDFL 1386
LGRSRQ QGLAVAM KLWE+S IAKIALKRGV LTTSERMAE+IK+LTG ++LSRNKDFL
Sbjct: 469 LGRSRQLQGLAVAMAKLWEKSLIAKIALKRGVQLTTSERMAEDIKRLTGGVMLSRNKDFL 528
Query: 1385 VFYRGKDFLSPEVAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGTLGE 1206
VFYRGK+FLSP+V EALLE+ERLAK+LQDEEEQARLRAS++ IP +E+ +GTAGTLGE
Sbjct: 529 VFYRGKNFLSPDVTEALLERERLAKSLQDEEEQARLRASAMFIPNVEVAQHFGTAGTLGE 588
Query: 1205 TLDADARWGKRLDYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKVESS 1026
TLDADA+WGKRLD KEKVM+EA++LRHA+LVRKLERKL+FAERKLM+AE+ LSKVE S
Sbjct: 589 TLDADAKWGKRLD---KEKVMREADILRHAHLVRKLERKLSFAERKLMRAEQALSKVEES 645
Query: 1025 LNPAELPQDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVV 846
L P++ DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK++
Sbjct: 646 LKPSKQQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIM 705
Query: 845 VKAKSFDQVKKIALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLRPKNLLTKRK 666
V AK+F+QVK IAL+LEAESGGVLVSVDKVSK +AI+V+RGKDY RPS+LRPKNLLTKRK
Sbjct: 706 VNAKTFEQVKNIALALEAESGGVLVSVDKVSKKFAIIVYRGKDYHRPSTLRPKNLLTKRK 765
Query: 665 ALARSIELQRREALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLDSAYPTXXXX 486
ALARSIELQR+EALL HIS +Q+KVD LRSEI QM V+D GDE LY+KLDS+YPT
Sbjct: 766 ALARSIELQRQEALLKHISAVQSKVDTLRSEIEQMDSVKDQGDEALYNKLDSSYPT-DDE 824
Query: 485 XXXXXXXXXENYXXXXXXXXXXDNSVHNLRLETKFPYDFQDQEPETEAGVDE 330
E Y + S+ N +LET FPY F++Q+ +TE V +
Sbjct: 825 DSEEVDAYLETYNRENEGEDEGNYSICNPQLETNFPY-FENQDSQTELEVPQ 875
>ref|XP_008224429.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Prunus mume]
Length = 899
Score = 1129 bits (2920), Expect = 0.0
Identities = 593/892 (66%), Positives = 709/892 (79%), Gaps = 10/892 (1%)
Frame = -3
Query: 2975 MALVPSRQFYPTTTFLDSFQSSYKVHLTTRLQLLRYGCSIPFKKQNFYVSHNTINSNSSP 2796
M LVPSRQ YPT+ F DSFQSS+ + L R G SIPFKK FY +H TI+S +P
Sbjct: 1 MTLVPSRQLYPTSLF-DSFQSSFSKFHGPHIHLFRCGSSIPFKKHTFYATHYTISSTLNP 59
Query: 2795 RS----KSNFMLKSGNSRWGFANETPISQSNPSVSLSRNSWVDKWNETHQQNQPKLPRPV 2628
KSNF+ K+ PISQ P + S +SW+DKWNE+H+ N PK PR V
Sbjct: 60 EQNPLRKSNFVRKN----------QPISQYKPKKNFSSSSWIDKWNESHKHNCPKPPRAV 109
Query: 2627 FNYRNS--GNLLSCGYERNNTXXXXXXS--TMERIVEKLKKFGYIDDVNEKKDKV-DRVI 2463
+Y++S GNL GY ++ S TME+IVEKLKKFGY+DD NE K +V DRV+
Sbjct: 110 LDYQSSESGNLSGSGYAEGDSGGGRNSSGSTMEKIVEKLKKFGYVDDSNENKGEVRDRVM 169
Query: 2462 EKGSVEDIFYVEEGMLPNAKGGFSEESPLGVENVLGNGEEVRFPWEKPMVKEEEEKSFSV 2283
EKGSVEDIFYVEEG LPN++GGFSEESPLG+ENV G +VRFPWEKP +E++E+ SV
Sbjct: 170 EKGSVEDIFYVEEGKLPNSRGGFSEESPLGIENVFGGDGKVRFPWEKPKEEEKQEEG-SV 228
Query: 2282 RQKSRTSLAELTLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEIVRLK 2103
R+KSRTSLAELTLPESE+RRLTNL + K++T+IGG GVTQ++V++IH++WK SEIVRLK
Sbjct: 229 RRKSRTSLAELTLPESELRRLTNLTFQKKHKTRIGGGGVTQAVVEMIHERWKTSEIVRLK 288
Query: 2102 IEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLRLTKRTYIKNDVPRN 1923
IEG PALNMKRMHEILERKTGGLVIWRSGTS+SLYRG+++EVPS++L K+ Y KND
Sbjct: 289 IEGPPALNMKRMHEILERKTGGLVIWRSGTSLSLYRGVSYEVPSVKLNKQIYKKNDTSSA 348
Query: 1922 SISTATDKTSGIASE-SPCNAVHAPQTDSENTVEQEKNSESLPEVEYEDEVDRLLDGLGP 1746
T DK+ G +E + + V P+ ENT ++++++E L EV+YEDEVD+LLD LGP
Sbjct: 349 PFPTVADKSVGDFAELASYSNVKTPKEKLENTSQEKEDTEQLAEVKYEDEVDKLLDSLGP 408
Query: 1745 RYVDWPGGDPLPVDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPPHFA 1566
R+ DWPG DPLPVDAD+LPGI+ GYQPPFR+LPYGVRSTLG+KEAT+LRRLARV+PPHFA
Sbjct: 409 RFKDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLGLKEATSLRRLARVLPPHFA 468
Query: 1565 LGRSRQHQGLAVAMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNKDFL 1386
LGRSRQ QGLAVAM KLWE+S IAKIALKRGV LTTSERMAE+IK+LTG ++LSRNKDFL
Sbjct: 469 LGRSRQLQGLAVAMAKLWEKSLIAKIALKRGVQLTTSERMAEDIKRLTGGVMLSRNKDFL 528
Query: 1385 VFYRGKDFLSPEVAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGTLGE 1206
VFYRGK+FLSP+V EALLE+ERLAK+LQDEEEQARLRAS+++IP +E+ +GT GTLGE
Sbjct: 529 VFYRGKNFLSPDVTEALLERERLAKSLQDEEEQARLRASAMIIPNVEVAQHFGTTGTLGE 588
Query: 1205 TLDADARWGKRLDYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKVESS 1026
TLDADA+WGKRLD KEKVM+EA++LRHA+LVRKLERKL+FAERKLM+AE+ LSKVE S
Sbjct: 589 TLDADAKWGKRLD---KEKVMREADILRHAHLVRKLERKLSFAERKLMRAEQALSKVEES 645
Query: 1025 LNPAELPQDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVV 846
L P++ DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK++
Sbjct: 646 LKPSKQQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIM 705
Query: 845 VKAKSFDQVKKIALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLRPKNLLTKRK 666
V AK+F+QVK IAL+LEAESGGVLVSVDKVSK +AI+V+RGKDY RPS+LRPKNLLTKRK
Sbjct: 706 VNAKTFEQVKNIALALEAESGGVLVSVDKVSKKFAIIVYRGKDYHRPSTLRPKNLLTKRK 765
Query: 665 ALARSIELQRREALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLDSAYPTXXXX 486
ALARSIELQR+EALL HIS +Q+KVD LR EI QM V+D GDE LY+KLDS+YPT
Sbjct: 766 ALARSIELQRQEALLKHISAVQSKVDTLRCEIEQMDSVKDQGDEALYNKLDSSYPT-DDE 824
Query: 485 XXXXXXXXXENYXXXXXXXXXXDNSVHNLRLETKFPYDFQDQEPETEAGVDE 330
E Y + S+ N LET FPY F++Q+ +TE V +
Sbjct: 825 DSEEGDAYLETYNSENDGEDEGNYSICNPHLETNFPY-FENQDSQTELEVPQ 875
>ref|XP_010278131.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X2 [Nelumbo nucifera]
gi|720071686|ref|XP_010278132.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1, chloroplastic
isoform X2 [Nelumbo nucifera]
gi|720071690|ref|XP_010278133.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1, chloroplastic
isoform X2 [Nelumbo nucifera]
Length = 914
Score = 1127 bits (2916), Expect = 0.0
Identities = 598/887 (67%), Positives = 691/887 (77%), Gaps = 9/887 (1%)
Frame = -3
Query: 2975 MALVPSRQFYPTTTFLDSFQSSYKVHLTTRLQLLRYGCSIPFKKQNFYVSHNTINSNSSP 2796
MAL+PS QFYPT+ FLDSFQSS +RL +LRY SI FK+ NF VSHN I S+S P
Sbjct: 1 MALLPSCQFYPTS-FLDSFQSSLSRFQGSRLLILRYASSIRFKRHNFSVSHNNIISDSLP 59
Query: 2795 ----RSKSNFMLKSGNSRWGFANETPISQSNPSVSLSRNSWVDKWNETHQQNQPKLPRPV 2628
+ S+F LK N R FA ETPISQS + S NSW+ KWNETHQQN P P+ V
Sbjct: 60 EKNQQKNSSFALKKNNDRRYFAEETPISQSISNGDFSSNSWISKWNETHQQNLPNRPQTV 119
Query: 2627 FNYRNSGNLLSCGYERNNTXXXXXXS-TMERIVEKLKKFGYIDDVNEKKDKVDRVIEKGS 2451
+YRN G++ S + NNT S TM++IVEKLK+FGY+DD+NE+++ RV EKGS
Sbjct: 120 LDYRNGGDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERRE---RVPEKGS 176
Query: 2450 VEDIFYVEEGMLPNAKGGFSEESPLGVENVLGNGEEVRFPWEKPMVKEEEEKSFSVRQKS 2271
VEDIFYVEEGMLPN +GGFS ESPLG+EN LG EVRFPWEK +KEEEE++ S R +S
Sbjct: 177 VEDIFYVEEGMLPNTRGGFSAESPLGIENGLGGSGEVRFPWEKRSMKEEEERN-SFRSRS 235
Query: 2270 RTSLAELTLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEIVRLKIEGA 2091
RTSLAELTLPESE+RRL NLA R K +TKI G+GVTQ++VD IH+KWK SEIVRLK EGA
Sbjct: 236 RTSLAELTLPESELRRLRNLAVRTKQKTKIKGAGVTQAVVDAIHEKWKTSEIVRLKCEGA 295
Query: 2090 PALNMKRMHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLR-LTKRTYIKNDVPRNSIS 1914
ALNMKRMHEILERKTGGLVIWRSGTS+SLYRG+++EV S++ KR N+ NS
Sbjct: 296 SALNMKRMHEILERKTGGLVIWRSGTSISLYRGVSYEVASVKDARKRIQNINENSHNSFE 355
Query: 1913 TATDKTSGIASE-SPCNAVHAPQTDSENTVEQEKNSESLPEVEYEDEVDRLLDGLGPRYV 1737
T K + E S AV PQT TVE++K+ ESLPE++YE E+D LLD LGPRY
Sbjct: 356 IITAKINRDPKENSSYGAVQEPQTSMVATVEEKKDVESLPEIKYEHEMDELLDSLGPRYT 415
Query: 1736 DWPGGDPLPVDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPPHFALGR 1557
DWPG PLPVDADLLPG++L Y+PPFRILPYGVRSTLG+KE TALRRLAR+IPPHFALGR
Sbjct: 416 DWPGNGPLPVDADLLPGVVLNYKPPFRILPYGVRSTLGIKETTALRRLARIIPPHFALGR 475
Query: 1556 SRQHQGLAVAMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNKDFLVFY 1377
SRQHQGLA+AMIKLWERSSIAKIALKRGV LTTSERMAE+IKKLTG+ +LSRNKDF+VFY
Sbjct: 476 SRQHQGLAMAMIKLWERSSIAKIALKRGVQLTTSERMAEDIKKLTGATILSRNKDFIVFY 535
Query: 1376 RGKDFLSPEVAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGTLGETLD 1197
RGK+FLSP+V EALLE+ERLAK LQDEEEQARLRASS+VI E E GTAGTL ETL+
Sbjct: 536 RGKNFLSPDVTEALLERERLAKALQDEEEQARLRASSMVISVSETIVESGTAGTLEETLE 595
Query: 1196 ADARWGKRLDYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKVESSLNP 1017
ADARWGK+LD ++K+M+ AEV RH LVRKLE+KLA AERKLMKAER LSKVE L P
Sbjct: 596 ADARWGKKLDDEDRKKMMRAAEVARHGTLVRKLEQKLALAERKLMKAERALSKVEEFLKP 655
Query: 1016 AELPQDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVVVKA 837
E P DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK++VKA
Sbjct: 656 TERPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKA 715
Query: 836 KSFDQVKKIALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLRPKNLLTKRKALA 657
K+FDQV+ IAL+LEAESGG+LVSVD+VSKG+AI+VFRGKDYKRP +LRPKNLLTKRKALA
Sbjct: 716 KTFDQVRNIALALEAESGGILVSVDRVSKGFAIIVFRGKDYKRPPTLRPKNLLTKRKALA 775
Query: 656 RSIELQRREALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLDSAYPTXXXXXXX 477
RSIELQR EAL HIS L +V+ LRSE+ QM IV+D GDE+LY KLD+AYPT
Sbjct: 776 RSIELQRHEALYKHISTLNKRVEMLRSELDQMEIVKDQGDEELYAKLDAAYPTEDEDSED 835
Query: 476 XXXXXXENYXXXXXXXXXXDNSVHNL--RLETKFPYDFQDQEPETEA 342
+++ N +ET FPYD Q+ ET++
Sbjct: 836 EGDEAYLETYDSDNNDADPKDAIQNFHAEIETNFPYDEQNWAGETDS 882
>ref|XP_010278136.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X4 [Nelumbo nucifera]
Length = 880
Score = 1124 bits (2908), Expect = 0.0
Identities = 596/880 (67%), Positives = 687/880 (78%), Gaps = 9/880 (1%)
Frame = -3
Query: 2975 MALVPSRQFYPTTTFLDSFQSSYKVHLTTRLQLLRYGCSIPFKKQNFYVSHNTINSNSSP 2796
MAL+PS QFYPT+ FLDSFQSS +RL +LRY SI FK+ NF VSHN I S+S P
Sbjct: 1 MALLPSCQFYPTS-FLDSFQSSLSRFQGSRLLILRYASSIRFKRHNFSVSHNNIISDSLP 59
Query: 2795 ----RSKSNFMLKSGNSRWGFANETPISQSNPSVSLSRNSWVDKWNETHQQNQPKLPRPV 2628
+ S+F LK N R FA ETPISQS + S NSW+ KWNETHQQN P P+ V
Sbjct: 60 EKNQQKNSSFALKKNNDRRYFAEETPISQSISNGDFSSNSWISKWNETHQQNLPNRPQTV 119
Query: 2627 FNYRNSGNLLSCGYERNNTXXXXXXS-TMERIVEKLKKFGYIDDVNEKKDKVDRVIEKGS 2451
+YRN G++ S + NNT S TM++IVEKLK+FGY+DD+NE+++ RV EKGS
Sbjct: 120 LDYRNGGDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERRE---RVPEKGS 176
Query: 2450 VEDIFYVEEGMLPNAKGGFSEESPLGVENVLGNGEEVRFPWEKPMVKEEEEKSFSVRQKS 2271
VEDIFYVEEGMLPN +GGFS ESPLG+EN LG EVRFPWEK +KEEEE++ S R +S
Sbjct: 177 VEDIFYVEEGMLPNTRGGFSAESPLGIENGLGGSGEVRFPWEKRSMKEEEERN-SFRSRS 235
Query: 2270 RTSLAELTLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEIVRLKIEGA 2091
RTSLAELTLPESE+RRL NLA R K +TKI G+GVTQ++VD IH+KWK SEIVRLK EGA
Sbjct: 236 RTSLAELTLPESELRRLRNLAVRTKQKTKIKGAGVTQAVVDAIHEKWKTSEIVRLKCEGA 295
Query: 2090 PALNMKRMHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLR-LTKRTYIKNDVPRNSIS 1914
ALNMKRMHEILERKTGGLVIWRSGTS+SLYRG+++EV S++ KR N+ NS
Sbjct: 296 SALNMKRMHEILERKTGGLVIWRSGTSISLYRGVSYEVASVKDARKRIQNINENSHNSFE 355
Query: 1913 TATDKTSGIASE-SPCNAVHAPQTDSENTVEQEKNSESLPEVEYEDEVDRLLDGLGPRYV 1737
T K + E S AV PQT TVE++K+ ESLPE++YE E+D LLD LGPRY
Sbjct: 356 IITAKINRDPKENSSYGAVQEPQTSMVATVEEKKDVESLPEIKYEHEMDELLDSLGPRYT 415
Query: 1736 DWPGGDPLPVDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPPHFALGR 1557
DWPG PLPVDADLLPG++L Y+PPFRILPYGVRSTLG+KE TALRRLAR+IPPHFALGR
Sbjct: 416 DWPGNGPLPVDADLLPGVVLNYKPPFRILPYGVRSTLGIKETTALRRLARIIPPHFALGR 475
Query: 1556 SRQHQGLAVAMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNKDFLVFY 1377
SRQHQGLA+AMIKLWERSSIAKIALKRGV LTTSERMAE+IKKLTG+ +LSRNKDF+VFY
Sbjct: 476 SRQHQGLAMAMIKLWERSSIAKIALKRGVQLTTSERMAEDIKKLTGATILSRNKDFIVFY 535
Query: 1376 RGKDFLSPEVAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGTLGETLD 1197
RGK+FLSP+V EALLE+ERLAK LQDEEEQARLRASS+VI E E GTAGTL ETL+
Sbjct: 536 RGKNFLSPDVTEALLERERLAKALQDEEEQARLRASSMVISVSETIVESGTAGTLEETLE 595
Query: 1196 ADARWGKRLDYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKVESSLNP 1017
ADARWGK+LD ++K+M+ AEV RH LVRKLE+KLA AERKLMKAER LSKVE L P
Sbjct: 596 ADARWGKKLDDEDRKKMMRAAEVARHGTLVRKLEQKLALAERKLMKAERALSKVEEFLKP 655
Query: 1016 AELPQDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVVVKA 837
E P DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK++VKA
Sbjct: 656 TERPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKA 715
Query: 836 KSFDQVKKIALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLRPKNLLTKRKALA 657
K+FDQV+ IAL+LEAESGG+LVSVD+VSKG+AI+VFRGKDYKRP +LRPKNLLTKRKALA
Sbjct: 716 KTFDQVRNIALALEAESGGILVSVDRVSKGFAIIVFRGKDYKRPPTLRPKNLLTKRKALA 775
Query: 656 RSIELQRREALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLDSAYPTXXXXXXX 477
RSIELQR EAL HIS L +V+ LRSE+ QM IV+D GDE+LY KLD+AYPT
Sbjct: 776 RSIELQRHEALYKHISTLNKRVEMLRSELDQMEIVKDQGDEELYAKLDAAYPTEDEDSED 835
Query: 476 XXXXXXENYXXXXXXXXXXDNSVHNL--RLETKFPYDFQD 363
+++ N +ET FPYD Q+
Sbjct: 836 EGDEAYLETYDSDNNDADPKDAIQNFHAEIETNFPYDEQN 875
>ref|XP_010278134.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X3 [Nelumbo nucifera]
Length = 896
Score = 1124 bits (2908), Expect = 0.0
Identities = 596/880 (67%), Positives = 687/880 (78%), Gaps = 9/880 (1%)
Frame = -3
Query: 2975 MALVPSRQFYPTTTFLDSFQSSYKVHLTTRLQLLRYGCSIPFKKQNFYVSHNTINSNSSP 2796
MAL+PS QFYPT+ FLDSFQSS +RL +LRY SI FK+ NF VSHN I S+S P
Sbjct: 1 MALLPSCQFYPTS-FLDSFQSSLSRFQGSRLLILRYASSIRFKRHNFSVSHNNIISDSLP 59
Query: 2795 ----RSKSNFMLKSGNSRWGFANETPISQSNPSVSLSRNSWVDKWNETHQQNQPKLPRPV 2628
+ S+F LK N R FA ETPISQS + S NSW+ KWNETHQQN P P+ V
Sbjct: 60 EKNQQKNSSFALKKNNDRRYFAEETPISQSISNGDFSSNSWISKWNETHQQNLPNRPQTV 119
Query: 2627 FNYRNSGNLLSCGYERNNTXXXXXXS-TMERIVEKLKKFGYIDDVNEKKDKVDRVIEKGS 2451
+YRN G++ S + NNT S TM++IVEKLK+FGY+DD+NE+++ RV EKGS
Sbjct: 120 LDYRNGGDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERRE---RVPEKGS 176
Query: 2450 VEDIFYVEEGMLPNAKGGFSEESPLGVENVLGNGEEVRFPWEKPMVKEEEEKSFSVRQKS 2271
VEDIFYVEEGMLPN +GGFS ESPLG+EN LG EVRFPWEK +KEEEE++ S R +S
Sbjct: 177 VEDIFYVEEGMLPNTRGGFSAESPLGIENGLGGSGEVRFPWEKRSMKEEEERN-SFRSRS 235
Query: 2270 RTSLAELTLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEIVRLKIEGA 2091
RTSLAELTLPESE+RRL NLA R K +TKI G+GVTQ++VD IH+KWK SEIVRLK EGA
Sbjct: 236 RTSLAELTLPESELRRLRNLAVRTKQKTKIKGAGVTQAVVDAIHEKWKTSEIVRLKCEGA 295
Query: 2090 PALNMKRMHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLR-LTKRTYIKNDVPRNSIS 1914
ALNMKRMHEILERKTGGLVIWRSGTS+SLYRG+++EV S++ KR N+ NS
Sbjct: 296 SALNMKRMHEILERKTGGLVIWRSGTSISLYRGVSYEVASVKDARKRIQNINENSHNSFE 355
Query: 1913 TATDKTSGIASE-SPCNAVHAPQTDSENTVEQEKNSESLPEVEYEDEVDRLLDGLGPRYV 1737
T K + E S AV PQT TVE++K+ ESLPE++YE E+D LLD LGPRY
Sbjct: 356 IITAKINRDPKENSSYGAVQEPQTSMVATVEEKKDVESLPEIKYEHEMDELLDSLGPRYT 415
Query: 1736 DWPGGDPLPVDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPPHFALGR 1557
DWPG PLPVDADLLPG++L Y+PPFRILPYGVRSTLG+KE TALRRLAR+IPPHFALGR
Sbjct: 416 DWPGNGPLPVDADLLPGVVLNYKPPFRILPYGVRSTLGIKETTALRRLARIIPPHFALGR 475
Query: 1556 SRQHQGLAVAMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNKDFLVFY 1377
SRQHQGLA+AMIKLWERSSIAKIALKRGV LTTSERMAE+IKKLTG+ +LSRNKDF+VFY
Sbjct: 476 SRQHQGLAMAMIKLWERSSIAKIALKRGVQLTTSERMAEDIKKLTGATILSRNKDFIVFY 535
Query: 1376 RGKDFLSPEVAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGTLGETLD 1197
RGK+FLSP+V EALLE+ERLAK LQDEEEQARLRASS+VI E E GTAGTL ETL+
Sbjct: 536 RGKNFLSPDVTEALLERERLAKALQDEEEQARLRASSMVISVSETIVESGTAGTLEETLE 595
Query: 1196 ADARWGKRLDYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKVESSLNP 1017
ADARWGK+LD ++K+M+ AEV RH LVRKLE+KLA AERKLMKAER LSKVE L P
Sbjct: 596 ADARWGKKLDDEDRKKMMRAAEVARHGTLVRKLEQKLALAERKLMKAERALSKVEEFLKP 655
Query: 1016 AELPQDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVVVKA 837
E P DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK++VKA
Sbjct: 656 TERPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKA 715
Query: 836 KSFDQVKKIALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLRPKNLLTKRKALA 657
K+FDQV+ IAL+LEAESGG+LVSVD+VSKG+AI+VFRGKDYKRP +LRPKNLLTKRKALA
Sbjct: 716 KTFDQVRNIALALEAESGGILVSVDRVSKGFAIIVFRGKDYKRPPTLRPKNLLTKRKALA 775
Query: 656 RSIELQRREALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLDSAYPTXXXXXXX 477
RSIELQR EAL HIS L +V+ LRSE+ QM IV+D GDE+LY KLD+AYPT
Sbjct: 776 RSIELQRHEALYKHISTLNKRVEMLRSELDQMEIVKDQGDEELYAKLDAAYPTEDEDSED 835
Query: 476 XXXXXXENYXXXXXXXXXXDNSVHNL--RLETKFPYDFQD 363
+++ N +ET FPYD Q+
Sbjct: 836 EGDEAYLETYDSDNNDADPKDAIQNFHAEIETNFPYDEQN 875
>ref|XP_010278130.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X1 [Nelumbo nucifera]
Length = 919
Score = 1124 bits (2908), Expect = 0.0
Identities = 596/880 (67%), Positives = 687/880 (78%), Gaps = 9/880 (1%)
Frame = -3
Query: 2975 MALVPSRQFYPTTTFLDSFQSSYKVHLTTRLQLLRYGCSIPFKKQNFYVSHNTINSNSSP 2796
MAL+PS QFYPT+ FLDSFQSS +RL +LRY SI FK+ NF VSHN I S+S P
Sbjct: 1 MALLPSCQFYPTS-FLDSFQSSLSRFQGSRLLILRYASSIRFKRHNFSVSHNNIISDSLP 59
Query: 2795 ----RSKSNFMLKSGNSRWGFANETPISQSNPSVSLSRNSWVDKWNETHQQNQPKLPRPV 2628
+ S+F LK N R FA ETPISQS + S NSW+ KWNETHQQN P P+ V
Sbjct: 60 EKNQQKNSSFALKKNNDRRYFAEETPISQSISNGDFSSNSWISKWNETHQQNLPNRPQTV 119
Query: 2627 FNYRNSGNLLSCGYERNNTXXXXXXS-TMERIVEKLKKFGYIDDVNEKKDKVDRVIEKGS 2451
+YRN G++ S + NNT S TM++IVEKLK+FGY+DD+NE+++ RV EKGS
Sbjct: 120 LDYRNGGDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERRE---RVPEKGS 176
Query: 2450 VEDIFYVEEGMLPNAKGGFSEESPLGVENVLGNGEEVRFPWEKPMVKEEEEKSFSVRQKS 2271
VEDIFYVEEGMLPN +GGFS ESPLG+EN LG EVRFPWEK +KEEEE++ S R +S
Sbjct: 177 VEDIFYVEEGMLPNTRGGFSAESPLGIENGLGGSGEVRFPWEKRSMKEEEERN-SFRSRS 235
Query: 2270 RTSLAELTLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEIVRLKIEGA 2091
RTSLAELTLPESE+RRL NLA R K +TKI G+GVTQ++VD IH+KWK SEIVRLK EGA
Sbjct: 236 RTSLAELTLPESELRRLRNLAVRTKQKTKIKGAGVTQAVVDAIHEKWKTSEIVRLKCEGA 295
Query: 2090 PALNMKRMHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLR-LTKRTYIKNDVPRNSIS 1914
ALNMKRMHEILERKTGGLVIWRSGTS+SLYRG+++EV S++ KR N+ NS
Sbjct: 296 SALNMKRMHEILERKTGGLVIWRSGTSISLYRGVSYEVASVKDARKRIQNINENSHNSFE 355
Query: 1913 TATDKTSGIASE-SPCNAVHAPQTDSENTVEQEKNSESLPEVEYEDEVDRLLDGLGPRYV 1737
T K + E S AV PQT TVE++K+ ESLPE++YE E+D LLD LGPRY
Sbjct: 356 IITAKINRDPKENSSYGAVQEPQTSMVATVEEKKDVESLPEIKYEHEMDELLDSLGPRYT 415
Query: 1736 DWPGGDPLPVDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPPHFALGR 1557
DWPG PLPVDADLLPG++L Y+PPFRILPYGVRSTLG+KE TALRRLAR+IPPHFALGR
Sbjct: 416 DWPGNGPLPVDADLLPGVVLNYKPPFRILPYGVRSTLGIKETTALRRLARIIPPHFALGR 475
Query: 1556 SRQHQGLAVAMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNKDFLVFY 1377
SRQHQGLA+AMIKLWERSSIAKIALKRGV LTTSERMAE+IKKLTG+ +LSRNKDF+VFY
Sbjct: 476 SRQHQGLAMAMIKLWERSSIAKIALKRGVQLTTSERMAEDIKKLTGATILSRNKDFIVFY 535
Query: 1376 RGKDFLSPEVAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGTLGETLD 1197
RGK+FLSP+V EALLE+ERLAK LQDEEEQARLRASS+VI E E GTAGTL ETL+
Sbjct: 536 RGKNFLSPDVTEALLERERLAKALQDEEEQARLRASSMVISVSETIVESGTAGTLEETLE 595
Query: 1196 ADARWGKRLDYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKVESSLNP 1017
ADARWGK+LD ++K+M+ AEV RH LVRKLE+KLA AERKLMKAER LSKVE L P
Sbjct: 596 ADARWGKKLDDEDRKKMMRAAEVARHGTLVRKLEQKLALAERKLMKAERALSKVEEFLKP 655
Query: 1016 AELPQDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVVVKA 837
E P DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK++VKA
Sbjct: 656 TERPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKA 715
Query: 836 KSFDQVKKIALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLRPKNLLTKRKALA 657
K+FDQV+ IAL+LEAESGG+LVSVD+VSKG+AI+VFRGKDYKRP +LRPKNLLTKRKALA
Sbjct: 716 KTFDQVRNIALALEAESGGILVSVDRVSKGFAIIVFRGKDYKRPPTLRPKNLLTKRKALA 775
Query: 656 RSIELQRREALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLDSAYPTXXXXXXX 477
RSIELQR EAL HIS L +V+ LRSE+ QM IV+D GDE+LY KLD+AYPT
Sbjct: 776 RSIELQRHEALYKHISTLNKRVEMLRSELDQMEIVKDQGDEELYAKLDAAYPTEDEDSED 835
Query: 476 XXXXXXENYXXXXXXXXXXDNSVHNL--RLETKFPYDFQD 363
+++ N +ET FPYD Q+
Sbjct: 836 EGDEAYLETYDSDNNDADPKDAIQNFHAEIETNFPYDEQN 875
>ref|XP_008362021.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X1 [Malus domestica]
Length = 882
Score = 1120 bits (2896), Expect = 0.0
Identities = 582/886 (65%), Positives = 701/886 (79%), Gaps = 6/886 (0%)
Frame = -3
Query: 2975 MALVPSRQFYPTTTFLDSFQSSYKVHLTTRLQLLRYGCSIPFKKQNFYVSH----NTINS 2808
M L+PSRQ YPT+ F DSFQSS + +Q RYG SIPFK FY +H + +N
Sbjct: 1 MTLMPSRQLYPTSLF-DSFQSSLSKFNSAHIQFFRYGSSIPFKNHTFYTTHCIISSPLNP 59
Query: 2807 NSSPRSKSNFMLKSGNSRWGFANETPISQSNPSVSLSRNSWVDKWNETHQQNQPKLPRPV 2628
+ +P KSNF+ G +R P+ Q +L +SW++KWNE+H+ N+PK PR V
Sbjct: 60 DPNPMRKSNFV---GRNR-------PVYQCKLKRNLCSSSWINKWNESHKHNRPKPPRAV 109
Query: 2627 FNYRNSGNLLSCGYERNNTXXXXXXSTMERIVEKLKKFGYIDDVNEKKDKV-DRVIEKGS 2451
+Y++S E N STME+IVEKLKKFGY+DD N+ K +V RVIEKGS
Sbjct: 110 LDYQSS--------EGGNGSGNGGGSTMEKIVEKLKKFGYVDDSNDSKGEVRGRVIEKGS 161
Query: 2450 VEDIFYVEEGMLPNAKGGFSEESPLGVENVLGNGEEVRFPWEKPMVKEEEEKSFSVRQKS 2271
VEDIFYVEEGMLPN++G FS +SPLGVENV G+ +V FPWEKP +E++E+ SVR+KS
Sbjct: 162 VEDIFYVEEGMLPNSRGRFSADSPLGVENVFGSDGKVXFPWEKPAEEEKQEEG-SVRRKS 220
Query: 2270 RTSLAELTLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEIVRLKIEGA 2091
RTS+AELTLPESE+RRL NL + K++T+IGG+GVTQ++VD+IH++WK SEIVRLK+EG
Sbjct: 221 RTSVAELTLPESELRRLRNLTFQKKHKTRIGGAGVTQAVVDMIHERWKTSEIVRLKVEGP 280
Query: 2090 PALNMKRMHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLRLTKRTYIKNDVPRNSIST 1911
PALNMKRMHEILERKTGGLV+WRSGTS+SLYRG+++EVPS++L KR Y KND S+ T
Sbjct: 281 PALNMKRMHEILERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLNKRIYKKNDSSSASLPT 340
Query: 1910 ATDKTSGIASE-SPCNAVHAPQTDSENTVEQEKNSESLPEVEYEDEVDRLLDGLGPRYVD 1734
DK G E + V+ PQ E+T ++K++E LPEV+YEDEVD LLD LGPR+ D
Sbjct: 341 VADKXVGDFVEIASYXNVNTPQEKLESTFLEKKDTEQLPEVKYEDEVDELLDXLGPRFKD 400
Query: 1733 WPGGDPLPVDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPPHFALGRS 1554
WPG DPLPVDAD+LPGI+ GY+PPFR+LPYGVRS+LG++EAT+LRRLARV+PPHFALGRS
Sbjct: 401 WPGCDPLPVDADMLPGIVPGYEPPFRVLPYGVRSSLGLQEATSLRRLARVLPPHFALGRS 460
Query: 1553 RQHQGLAVAMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNKDFLVFYR 1374
RQ QGLAVAM KLWERS I KIALKRGV LTTSERMAE+IK+LTG +LLSRNKDFLVFYR
Sbjct: 461 RQLQGLAVAMAKLWERSLIXKIALKRGVQLTTSERMAEDIKRLTGGVLLSRNKDFLVFYR 520
Query: 1373 GKDFLSPEVAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGTLGETLDA 1194
GK+FLSPEV EALLE+ERLAK+LQDEEEQARLRAS++VIP +E +GTAGTLGETLDA
Sbjct: 521 GKNFLSPEVTEALLERERLAKSLQDEEEQARLRASAMVIPNVEQAQHFGTAGTLGETLDA 580
Query: 1193 DARWGKRLDYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKVESSLNPA 1014
DA+WGKR+D HHK+KVMQEA++LRH+NL RKLERKLAFAERKLMKAE+ LSKVE L P+
Sbjct: 581 DAKWGKRMDNHHKKKVMQEADILRHSNLXRKLERKLAFAERKLMKAEQALSKVEECLKPS 640
Query: 1013 ELPQDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVVVKAK 834
DP+SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK++V AK
Sbjct: 641 MXQADPDSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIMVNAK 700
Query: 833 SFDQVKKIALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLRPKNLLTKRKALAR 654
SF+QVKKIAL+LEAESGGVLVSVDKVSK +AI+V+RGKDY RPS+LRPKNLLTKRKALAR
Sbjct: 701 SFEQVKKIALALEAESGGVLVSVDKVSKKFAIIVYRGKDYHRPSTLRPKNLLTKRKALAR 760
Query: 653 SIELQRREALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLDSAYPTXXXXXXXX 474
SIE+QR+EALL HIS++Q+KVD LRSEI QM V++ GDE LYDKLDS+YPT
Sbjct: 761 SIEIQRQEALLKHISVVQSKVDTLRSEIEQMDAVKEHGDEVLYDKLDSSYPTDDDDDSEE 820
Query: 473 XXXXXENYXXXXXXXXXXDNSVHNLRLETKFPYDFQDQEPETEAGV 336
E Y + S H+ LE+ FP++ Q+++ +TE V
Sbjct: 821 EDVYLETYSAENDGEDEGNYSTHDPHLESIFPFNIQNEDSQTELEV 866
>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Vitis vinifera]
gi|297737163|emb|CBI26364.3| unnamed protein product
[Vitis vinifera]
Length = 902
Score = 1118 bits (2892), Expect = 0.0
Identities = 608/900 (67%), Positives = 700/900 (77%), Gaps = 14/900 (1%)
Frame = -3
Query: 2975 MALVPSRQFYPTTT-FLDSFQSSYKVHLTTRLQLLRYGCSIPFKKQNFYVSHNTINSNSS 2799
MAL+PSRQFYPTTT FLDSF S TRLQ RYG S F+ + YV+ NTI SNS+
Sbjct: 1 MALLPSRQFYPTTTSFLDSFHS-------TRLQFFRYGSSNRFRTHSSYVARNTIASNST 53
Query: 2798 -PRSKSNFMLKSGNSRWGFANETPISQ-SNPSVSLSRNSWVDKWNETHQQNQPKLPRPVF 2625
P+ KSN + F N TP+SQ + VS S +W+DKWN HQ++ PK RPV
Sbjct: 54 NPQRKSNIV---------FTN-TPVSQYDSGGVSSSGGNWIDKWNGPHQKSHPKESRPVM 103
Query: 2624 NYRNSGNLLSCGYERNNTXXXXXXSTMERIVEKLKKFGYIDDVNEKKDKV-DRVIEKGSV 2448
NYRNS + + STME+IVEKLKKFGY+DDV E K+ V +R+IEKGS+
Sbjct: 104 NYRNSETV------SRSDGGSGGGSTMEKIVEKLKKFGYMDDVKETKENVQERIIEKGSI 157
Query: 2447 EDIFYVEEGMLPNAKGGFSEESPLGVENVLGNGEEVRFPWEKPMVKEEEEKSFSVRQKSR 2268
EDIFY+EEG+LPN +GGFS +SPLGVEN EVRFPWE+P V+E SVR KSR
Sbjct: 158 EDIFYIEEGILPNPQGGFSLDSPLGVENKGDGNGEVRFPWERPKVEEG-----SVRIKSR 212
Query: 2267 TSLAELTLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEIVRLKIEGAP 2088
TSLAELTLPESE+RRL NL R KN+TKIGG GVTQ++VD+I +KWK SEIV+LK EGA
Sbjct: 213 TSLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEGAA 272
Query: 2087 ALNMKRMHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLRLTKRTYIKNDVPRNSISTA 1908
ALNM+R+HEILERKTGGLVIWRSGTSVSLYRG+++EVP ++L KR Y KN+ +S S+
Sbjct: 273 ALNMRRIHEILERKTGGLVIWRSGTSVSLYRGVSYEVP-VQLNKRVYKKNETSHSSFSSI 331
Query: 1907 T--------DKTSGIASESPCNA-VHAPQTDSENTVEQEKNSESLPEVEYEDEVDRLLDG 1755
T +KTSG A N VHA Q T + K++ES EV+YEDE+D+LLDG
Sbjct: 332 TPNSFAISSNKTSGNAPAVGSNQNVHASQATLNITDGENKDTES--EVKYEDEIDKLLDG 389
Query: 1754 LGPRYVDWPGGDPLPVDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPP 1575
LGPRY DWPG DPLP+DADLLPG I GYQPPFRILPYGVRS+LG+KEATALRRLARV+PP
Sbjct: 390 LGPRYTDWPGCDPLPIDADLLPGKIHGYQPPFRILPYGVRSSLGLKEATALRRLARVLPP 449
Query: 1574 HFALGRSRQHQGLAVAMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNK 1395
HFALGRSRQ +GLA+AMIKLWERSSIAK+ALKRGV LTTSERMAE+IKKLTG +LLSRNK
Sbjct: 450 HFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTGGVLLSRNK 509
Query: 1394 DFLVFYRGKDFLSPEVAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGT 1215
DFLVFYRGK+FLS +V EALLE+ERLAK LQDEEEQARLRAS+L+ P + IT++ G+AGT
Sbjct: 510 DFLVFYRGKNFLSSDVTEALLERERLAKALQDEEEQARLRASTLITPTVGITEQVGSAGT 569
Query: 1214 LGETLDADARWGKRLDYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKV 1035
LGETL+ADARWGKRLD H K+K++++AEV RHANLVRKLER+LA AERKLMKAE LSKV
Sbjct: 570 LGETLEADARWGKRLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENALSKV 629
Query: 1034 ESSLNPAELPQDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELV 855
E L PA P DPESITDEERFMFRKLGLRMKAFLLLGRRGVF GTVENMHLHWKYRELV
Sbjct: 630 EEFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYRELV 689
Query: 854 KVVVKAKSFDQVKKIALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLRPKNLLT 675
K++VKAK+FDQVKK AL+LE+ESGGVLVSVDKVSKG+AI+VFRGKDY+RPS+LRPKNLLT
Sbjct: 690 KIIVKAKTFDQVKKTALALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPSTLRPKNLLT 749
Query: 674 KRKALARSIELQRREALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLDSAYPT- 498
KRKALARSIELQRREAL NHIS LQ V+ LRSEI QM IV+D GDE+LYDKLDSAY T
Sbjct: 750 KRKALARSIELQRREALYNHISALQRNVEKLRSEIEQMDIVKDHGDEELYDKLDSAYATE 809
Query: 497 XXXXXXXXXXXXXENYXXXXXXXXXXDNSVHNLRLETKFPYDFQDQEPETEAGVDEVEKE 318
E Y DNS+HN +ET FPYD Q +E ETEA V + E E
Sbjct: 810 DEHTEEEGDEAYLETYADENDGEHESDNSIHNHHIETNFPYDIQGEEFETEAAVQDEESE 869
>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
Length = 902
Score = 1118 bits (2891), Expect = 0.0
Identities = 608/900 (67%), Positives = 700/900 (77%), Gaps = 14/900 (1%)
Frame = -3
Query: 2975 MALVPSRQFYPTTT-FLDSFQSSYKVHLTTRLQLLRYGCSIPFKKQNFYVSHNTINSNSS 2799
MAL+PSRQFYPTTT FLDSF S TRLQ RYG S F+ + YV+ NTI SNS+
Sbjct: 1 MALLPSRQFYPTTTSFLDSFHS-------TRLQFFRYGSSNRFRTHSSYVTRNTIASNST 53
Query: 2798 -PRSKSNFMLKSGNSRWGFANETPISQ-SNPSVSLSRNSWVDKWNETHQQNQPKLPRPVF 2625
P+ KSN + F N TP+SQ + VS S +W+DKWN HQ++ PK RPV
Sbjct: 54 NPQRKSNIV---------FTN-TPVSQYDSGGVSSSGGNWIDKWNGPHQKSHPKEXRPVM 103
Query: 2624 NYRNSGNLLSCGYERNNTXXXXXXSTMERIVEKLKKFGYIDDVNEKKDKV-DRVIEKGSV 2448
NYRNS + + STME+IVEKLKKFGY+DDV E K+ V +R+IEKGS+
Sbjct: 104 NYRNSETV------SRSDGGSGGGSTMEKIVEKLKKFGYMDDVKETKENVQERIIEKGSI 157
Query: 2447 EDIFYVEEGMLPNAKGGFSEESPLGVENVLGNGEEVRFPWEKPMVKEEEEKSFSVRQKSR 2268
EDIFY+EEG+LPN +GGFS +SPLGVEN EVRFPWE+P V+E SVR KSR
Sbjct: 158 EDIFYIEEGILPNPQGGFSLDSPLGVENKGDGNGEVRFPWERPKVEEG-----SVRIKSR 212
Query: 2267 TSLAELTLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEIVRLKIEGAP 2088
TSLAELTLPESE+RRL NL R KN+TKIGG GVTQ++VD+I +KWK SEIV+LK EGA
Sbjct: 213 TSLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEGAA 272
Query: 2087 ALNMKRMHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLRLTKRTYIKNDVPRNSISTA 1908
ALNM+R+HEILERKTGGLVIWRSGTSVSLYRG+++EVP ++L KR Y KN+ +S S+
Sbjct: 273 ALNMRRIHEILERKTGGLVIWRSGTSVSLYRGVSYEVP-VQLNKRVYKKNETSHSSFSSI 331
Query: 1907 T--------DKTSGIASESPCNA-VHAPQTDSENTVEQEKNSESLPEVEYEDEVDRLLDG 1755
T +KTSG A N VHA Q T + K++ES EV+YEDE+D+LLDG
Sbjct: 332 TPNSFAISSNKTSGNAPAVGSNQNVHASQATLXITDGENKDTES--EVKYEDEIDKLLDG 389
Query: 1754 LGPRYVDWPGGDPLPVDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPP 1575
LGPRY DWP DPLP+DADLLPG I GYQPPFRILPYGVRS+LG+KEATALRRLARV+PP
Sbjct: 390 LGPRYTDWPXCDPLPIDADLLPGKIHGYQPPFRILPYGVRSSLGLKEATALRRLARVLPP 449
Query: 1574 HFALGRSRQHQGLAVAMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNK 1395
HFALGRSRQ +GLA+AMIKLWERSSIAK+ALKRGV LTTSERMAE+IKKLTG +LLSRNK
Sbjct: 450 HFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTGGVLLSRNK 509
Query: 1394 DFLVFYRGKDFLSPEVAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGT 1215
DFLVFYRGK+FLS +V EALLE+ERLAK LQDEEEQARLRAS+L+ P + IT++ G+AGT
Sbjct: 510 DFLVFYRGKNFLSSDVTEALLERERLAKALQDEEEQARLRASTLITPTVGITEQVGSAGT 569
Query: 1214 LGETLDADARWGKRLDYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKV 1035
LGETL+ADARWGKRLD H K+K++++AEV RHANLVRKLER+LA AERKLMKAE LSKV
Sbjct: 570 LGETLEADARWGKRLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENALSKV 629
Query: 1034 ESSLNPAELPQDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELV 855
E L PA P DPESITDEERFMFRKLGLRMKAFLLLGRRGVF GTVENMHLHWKYRELV
Sbjct: 630 EEFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYRELV 689
Query: 854 KVVVKAKSFDQVKKIALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLRPKNLLT 675
K++VKAK+FDQVKK AL+LE+ESGGVLVSVDKVSKG+AI+VFRGKDY+RPS+LRPKNLLT
Sbjct: 690 KIIVKAKTFDQVKKTALALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPSTLRPKNLLT 749
Query: 674 KRKALARSIELQRREALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLDSAYPT- 498
KRKALARSIELQRREAL NHIS LQ V+ LRSEI QM IV+D GDE+LYDKLDSAY T
Sbjct: 750 KRKALARSIELQRREALYNHISALQRNVEKLRSEIEQMDIVKDHGDEELYDKLDSAYATE 809
Query: 497 XXXXXXXXXXXXXENYXXXXXXXXXXDNSVHNLRLETKFPYDFQDQEPETEAGVDEVEKE 318
E Y DNS+HN +ET FPYD QD+E ETEA V + E E
Sbjct: 810 DEHTEEEGDEAYLETYADENDGEHESDNSIHNHHIETNFPYDIQDEEFETEAAVQDEESE 869
>ref|XP_008362022.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X2 [Malus domestica]
Length = 864
Score = 1110 bits (2872), Expect = 0.0
Identities = 577/882 (65%), Positives = 691/882 (78%), Gaps = 2/882 (0%)
Frame = -3
Query: 2975 MALVPSRQFYPTTTFLDSFQSSYKVHLTTRLQLLRYGCSIPFKKQNFYVSHNTINSNSSP 2796
M L+PSRQ YPT+ F DSFQSS + +Q RYG SIPFK FY +H I+S +P
Sbjct: 1 MTLMPSRQLYPTSLF-DSFQSSLSKFNSAHIQFFRYGSSIPFKNHTFYTTHCIISSPLNP 59
Query: 2795 RSKSNFMLKSGNSRWGFANETPISQSNPSVSLSRNSWVDKWNETHQQNQPKLPRPVFNYR 2616
NP +L +SW++KWNE+H+ N+PK PR V +Y+
Sbjct: 60 ------------------------DPNPMRNLCSSSWINKWNESHKHNRPKPPRAVLDYQ 95
Query: 2615 NSGNLLSCGYERNNTXXXXXXSTMERIVEKLKKFGYIDDVNEKKDKV-DRVIEKGSVEDI 2439
+S E N STME+IVEKLKKFGY+DD N+ K +V RVIEKGSVEDI
Sbjct: 96 SS--------EGGNGSGNGGGSTMEKIVEKLKKFGYVDDSNDSKGEVRGRVIEKGSVEDI 147
Query: 2438 FYVEEGMLPNAKGGFSEESPLGVENVLGNGEEVRFPWEKPMVKEEEEKSFSVRQKSRTSL 2259
FYVEEGMLPN++G FS +SPLGVENV G+ +V FPWEKP +E++E+ SVR+KSRTS+
Sbjct: 148 FYVEEGMLPNSRGRFSADSPLGVENVFGSDGKVXFPWEKPAEEEKQEEG-SVRRKSRTSV 206
Query: 2258 AELTLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEIVRLKIEGAPALN 2079
AELTLPESE+RRL NL + K++T+IGG+GVTQ++VD+IH++WK SEIVRLK+EG PALN
Sbjct: 207 AELTLPESELRRLRNLTFQKKHKTRIGGAGVTQAVVDMIHERWKTSEIVRLKVEGPPALN 266
Query: 2078 MKRMHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLRLTKRTYIKNDVPRNSISTATDK 1899
MKRMHEILERKTGGLV+WRSGTS+SLYRG+++EVPS++L KR Y KND S+ T DK
Sbjct: 267 MKRMHEILERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLNKRIYKKNDSSSASLPTVADK 326
Query: 1898 TSGIASE-SPCNAVHAPQTDSENTVEQEKNSESLPEVEYEDEVDRLLDGLGPRYVDWPGG 1722
G E + V+ PQ E+T ++K++E LPEV+YEDEVD LLD LGPR+ DWPG
Sbjct: 327 XVGDFVEIASYXNVNTPQEKLESTFLEKKDTEQLPEVKYEDEVDELLDXLGPRFKDWPGC 386
Query: 1721 DPLPVDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPPHFALGRSRQHQ 1542
DPLPVDAD+LPGI+ GY+PPFR+LPYGVRS+LG++EAT+LRRLARV+PPHFALGRSRQ Q
Sbjct: 387 DPLPVDADMLPGIVPGYEPPFRVLPYGVRSSLGLQEATSLRRLARVLPPHFALGRSRQLQ 446
Query: 1541 GLAVAMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNKDFLVFYRGKDF 1362
GLAVAM KLWERS I KIALKRGV LTTSERMAE+IK+LTG +LLSRNKDFLVFYRGK+F
Sbjct: 447 GLAVAMAKLWERSLIXKIALKRGVQLTTSERMAEDIKRLTGGVLLSRNKDFLVFYRGKNF 506
Query: 1361 LSPEVAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGTLGETLDADARW 1182
LSPEV EALLE+ERLAK+LQDEEEQARLRAS++VIP +E +GTAGTLGETLDADA+W
Sbjct: 507 LSPEVTEALLERERLAKSLQDEEEQARLRASAMVIPNVEQAQHFGTAGTLGETLDADAKW 566
Query: 1181 GKRLDYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKVESSLNPAELPQ 1002
GKR+D HHK+KVMQEA++LRH+NL RKLERKLAFAERKLMKAE+ LSKVE L P+
Sbjct: 567 GKRMDNHHKKKVMQEADILRHSNLXRKLERKLAFAERKLMKAEQALSKVEECLKPSMXQA 626
Query: 1001 DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVVVKAKSFDQ 822
DP+SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK++V AKSF+Q
Sbjct: 627 DPDSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIMVNAKSFEQ 686
Query: 821 VKKIALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLRPKNLLTKRKALARSIEL 642
VKKIAL+LEAESGGVLVSVDKVSK +AI+V+RGKDY RPS+LRPKNLLTKRKALARSIE+
Sbjct: 687 VKKIALALEAESGGVLVSVDKVSKKFAIIVYRGKDYHRPSTLRPKNLLTKRKALARSIEI 746
Query: 641 QRREALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLDSAYPTXXXXXXXXXXXX 462
QR+EALL HIS++Q+KVD LRSEI QM V++ GDE LYDKLDS+YPT
Sbjct: 747 QRQEALLKHISVVQSKVDTLRSEIEQMDAVKEHGDEVLYDKLDSSYPTDDDDDSEEEDVY 806
Query: 461 XENYXXXXXXXXXXDNSVHNLRLETKFPYDFQDQEPETEAGV 336
E Y + S H+ LE+ FP++ Q+++ +TE V
Sbjct: 807 LETYSAENDGEDEGNYSTHDPHLESIFPFNIQNEDSQTELEV 848
>ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma cacao]
gi|508714003|gb|EOY05900.1| CRM family member 3A isoform
1 [Theobroma cacao]
Length = 876
Score = 1103 bits (2853), Expect = 0.0
Identities = 574/895 (64%), Positives = 696/895 (77%), Gaps = 14/895 (1%)
Frame = -3
Query: 2975 MALVPSRQFYPTTT----FLDSFQSSYKVHLTTRLQLLRYGCS-IPFKKQNFYVSHNTIN 2811
M L+P+RQF+P TT FLDSFQ+ L Y S P K Y ++ T+
Sbjct: 1 MTLLPTRQFHPATTTKSTFLDSFQTRLSKFHGLPLPFCSYDSSNFPLKTSTLYAANYTVT 60
Query: 2810 SNSS----PRSKSNFMLKSGNSRWGFANETPISQSNPSVSLSRNSWVDKWNETHQQNQPK 2643
SNS P+SK+ F + P +SN W+D WN+TH+ PK
Sbjct: 61 SNSLFHQYPKSKTK----------AFPTKDPTFRSN---------WLDSWNKTHKGFGPK 101
Query: 2642 LPRPVFNYRNSGNLLSCGYERNNTXXXXXXSTMERIVEKLKKFGYIDDVNEKKDKVD--- 2472
P+ VFNYR G++ S Y +++ STME+IVEKLKKFGYI + NE+K+K +
Sbjct: 102 PPKTVFNYRKKGDVWSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEP 161
Query: 2471 -RVIEKGSVEDIFYVEEGMLPNAKGGFSEESPLGVENVLGNGEEVRFPWEKPMVKEEEEK 2295
RVIE+GS+EDIFYVEEGMLPN +GGFS+ESPLG+ENV G+ EVRFPWEK ++EEE
Sbjct: 162 KRVIERGSIEDIFYVEEGMLPNNRGGFSKESPLGMENVFGSDGEVRFPWEKRK-EDEEEG 220
Query: 2294 SFSVRQKSRTSLAELTLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEI 2115
++ R+ S+TSLAELTLPESE+RRL NL R K++ +I G+GVTQ +VD IH+KWK EI
Sbjct: 221 GWTARRDSKTSLAELTLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEI 280
Query: 2114 VRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLRLTKRTYIKND 1935
VRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRG+++EVPS+ L+KR Y +N+
Sbjct: 281 VRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSKRIYKRNE 340
Query: 1934 VPRNSISTATDKTSGIASESPCNAVHAPQTDSENTVEQEKNSESLPEVEYEDEVDRLLDG 1755
++ + +DKT ++S V +PQ +SE E K++ESLPE+ YEDEVD+LL+G
Sbjct: 341 TFTYALPSVSDKTKDLSSLGSHKDVVSPQANSETAAEGNKDTESLPEIRYEDEVDKLLEG 400
Query: 1754 LGPRYVDWPGGDPLPVDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPP 1575
LGPRY DWPG +PLPVDADLLPGI+ GYQPPFR+LPYGVRS+LG+KEAT+LRRLARV+PP
Sbjct: 401 LGPRYTDWPGCNPLPVDADLLPGIVAGYQPPFRVLPYGVRSSLGLKEATSLRRLARVLPP 460
Query: 1574 HFALGRSRQHQGLAVAMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNK 1395
HFA+GRSRQ QGLAVAMIKLWE+SSIAKIALKRGV LTTSERMAE+IKKLTG +LLSRNK
Sbjct: 461 HFAIGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGMLLSRNK 520
Query: 1394 DFLVFYRGKDFLSPEVAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGT 1215
DFLVFYRGK+FLS +VAEAL+E+ERLAK+LQDEEEQARLRAS+ ++P E+ ++ G AGT
Sbjct: 521 DFLVFYRGKNFLSADVAEALVERERLAKSLQDEEEQARLRASAFLVPSTEVAEQSGAAGT 580
Query: 1214 LGETLDADARWGKRLDYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKV 1035
LGETLDADARWGKRLD HHKEKVM+EAE+LRHANLVRKL++ LAFA+RKL+KAER L+KV
Sbjct: 581 LGETLDADARWGKRLDNHHKEKVMKEAEILRHANLVRKLDKNLAFADRKLLKAERALTKV 640
Query: 1034 ESSLNPAELPQDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELV 855
E L PA+ DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELV
Sbjct: 641 EDYLKPADRQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELV 700
Query: 854 KVVVKAKSFDQVKKIALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLRPKNLLT 675
K+++KAK+FDQVKK+AL+LEAESGGVLVSVD++SKGYAI+V+RGKDY+RPS++RPKNLLT
Sbjct: 701 KIIMKAKTFDQVKKVALALEAESGGVLVSVDRISKGYAIIVYRGKDYQRPSTIRPKNLLT 760
Query: 674 KRKALARSIELQRREALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLDSAYPT- 498
KR+ALARSIELQRREAL+ H+S LQ KVD +RSEI QM +E+ GDE+ YD+LDS+YPT
Sbjct: 761 KRRALARSIELQRREALVKHVSALQAKVDKIRSEIDQMHSMEEQGDEEFYDRLDSSYPTD 820
Query: 497 XXXXXXXXXXXXXENYXXXXXXXXXXDNSVHNLRLETKFPYDFQDQEPETEAGVD 333
E Y D +HNL LETKFP F DQ + E+G++
Sbjct: 821 DDDTEEEGDEAYLETYESENDAEEENDELIHNLHLETKFP--FHDQHHQ-ESGIE 872
>ref|XP_008391092.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Malus domestica]
Length = 894
Score = 1102 bits (2850), Expect = 0.0
Identities = 581/890 (65%), Positives = 699/890 (78%), Gaps = 8/890 (0%)
Frame = -3
Query: 2975 MALVPSRQFYPTTTFLDSFQSSYKVHLTTRLQLLRYG--CSIPFKKQNFYVSHNTINS-N 2805
M LVPS Q YPT F DSFQ S +Q RYG S PF K FY +H+ I+S +
Sbjct: 1 MTLVPSLQLYPTNLF-DSFQRSLSKFNGPHIQFFRYGHGSSTPFNKHTFYATHSIISSPD 59
Query: 2804 SSPRSKSNFMLKSGNSRWGFANETPISQSNPSVSLSRNSWVDKWNETHQQNQPKLPRPVF 2625
+P KSNF+ G +R I Q P +L +SW+DKWNE+H++N+ K P+ V
Sbjct: 60 QNPVRKSNFV---GRNR-------SIYQYKPXRNLCTSSWIDKWNESHKRNRLKPPQAVL 109
Query: 2624 NYRNS--GNLLSCGYERNNTXXXXXXSTMERIVEKLKKFGYIDDVNEKKDKV-DRVIEKG 2454
+Y++S GNL G +T M++IVEKL KFGY+DD E K + +RVIEKG
Sbjct: 110 DYQSSESGNLSGSGNGGGST--------MQKIVEKLTKFGYVDDSXEGKGEARERVIEKG 161
Query: 2453 SVEDIFYVEEGMLPNAKGGFSEESPLGVENVLGNGEEVRFPWEKPMVKEEEEKSFSVRQK 2274
SVEDIFYVEEGMLPN++GGFS ESPLG+ENV G+ +VRFPWEKP +EE++ SVR+K
Sbjct: 162 SVEDIFYVEEGMLPNSRGGFSAESPLGIENVFGSDGKVRFPWEKP-AEEEKQDZGSVRRK 220
Query: 2273 SRTSLAELTLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEIVRLKIEG 2094
SRTS+AELTLPESE+RRL NL + K++TKIGG+GVTQ++VD+IH++WK SEIVRLK+EG
Sbjct: 221 SRTSVAELTLPESELRRLRNLTFQKKHKTKIGGAGVTQAVVDMIHERWKTSEIVRLKVEG 280
Query: 2093 APALNMKRMHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLRLTKRTYIKNDVPRN-SI 1917
PALNMKRMHEILERKTGGLV+WRSGTS+SLYRG+++EVPS++L KR Y K ++ + S
Sbjct: 281 PPALNMKRMHEILERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLNKRIYKKKEISSSTSF 340
Query: 1916 STATDKTSGIASE-SPCNAVHAPQTDSENTVEQEKNSESLPEVEYEDEVDRLLDGLGPRY 1740
DK+ G E + V+ PQ E+T ++K+++ LPEV+YEDEVD+LLD LGPR+
Sbjct: 341 PNVADKSLGDFVELASYGNVNTPQEKPESTSLEKKDTDQLPEVKYEDEVDKLLDSLGPRF 400
Query: 1739 VDWPGGDPLPVDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPPHFALG 1560
DWPG DPLPVDAD+LPG++ GY+PPFR+LPYGV S+LG++EAT+LRRLARV+PPHFALG
Sbjct: 401 KDWPGCDPLPVDADMLPGLVPGYEPPFRVLPYGVXSSLGLQEATSLRRLARVLPPHFALG 460
Query: 1559 RSRQHQGLAVAMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNKDFLVF 1380
RSRQ QGLAVAM KLWERS IAKIALKRGV LTTSERMAE+IK+LTG +LLSRNKDFLVF
Sbjct: 461 RSRQLQGLAVAMAKLWERSLIAKIALKRGVQLTTSERMAEDIKRLTGGVLLSRNKDFLVF 520
Query: 1379 YRGKDFLSPEVAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGTLGETL 1200
YRGK+FLSPEV EALLE+ERLAK+LQDEEEQARLRAS++VIP +E +GTAGTL ETL
Sbjct: 521 YRGKNFLSPEVTEALLERERLAKSLQDEEEQARLRASAMVIPNVEQAQHFGTAGTLAETL 580
Query: 1199 DADARWGKRLDYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKVESSLN 1020
DADA+WGK +D HHK+KVMQEA++LRHANLVRKLERKLAFAERKLMKAE+ LSKVE L
Sbjct: 581 DADAKWGKMMDNHHKKKVMQEADILRHANLVRKLERKLAFAERKLMKAEQALSKVEECLK 640
Query: 1019 PAELPQDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVVVK 840
P+ L DP+SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK++V
Sbjct: 641 PSTLQADPDSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIMVN 700
Query: 839 AKSFDQVKKIALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLRPKNLLTKRKAL 660
AKSF+QVKKIAL+LEAESGGVLVSVDKVSK +AI+V+RGKDY RPS+LRPKNLLTKRKAL
Sbjct: 701 AKSFEQVKKIALALEAESGGVLVSVDKVSKKFAIIVYRGKDYHRPSTLRPKNLLTKRKAL 760
Query: 659 ARSIELQRREALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLDSAYPTXXXXXX 480
ARSIE+QR+EALL HIS +Q+KVD LRSEI QM +V++ GDE LY+KLDS+YPT
Sbjct: 761 ARSIEIQRQEALLKHISXVQSKVDTLRSEIEQMDVVKERGDEVLYNKLDSSYPTDDDDDS 820
Query: 479 XXXXXXXENYXXXXXXXXXXDNSVHNLRLETKFPYDFQDQEPETEAGVDE 330
E Y + S H+ LET FPY Q+Q +TE V +
Sbjct: 821 EEEDVYLETYSXEDNGEDEGNYSTHDPHLETNFPYHIQNQASQTELEVPQ 870
>ref|XP_011091130.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Sesamum indicum]
Length = 886
Score = 1095 bits (2832), Expect = 0.0
Identities = 594/890 (66%), Positives = 690/890 (77%), Gaps = 13/890 (1%)
Frame = -3
Query: 2975 MALVPSRQFYPTTTFL-DSFQSSY-KVHLTTRLQLLRYGCSIPFKKQNFYVSHNTINSNS 2802
MA++PS QFYP +FL D+FQSS K H+ T LQ RY S+P K + F V T + NS
Sbjct: 1 MAVMPSYQFYPKNSFLMDTFQSSVSKFHVRTTLQFFRYSSSLPVKNRFFCVIDETSSRNS 60
Query: 2801 SPRSKSN--FMLKSGNSRWG--FANETPISQS-NPSVSLSRNSWVDKWNETHQQNQPKLP 2637
P+ + F L N + G F+ E PISQS N V LSR+SW+ W+ T + N + P
Sbjct: 61 VPQENPHKRFNLLPRNKKGGSSFSGEEPISQSSNSRVILSRSSWLANWDVTSKPNGGRRP 120
Query: 2636 RPVFNYRNSGNLLSCGYERNNTXXXXXXSTMERIVEKLKKFGYIDDVNEKKDKVDRVIEK 2457
+ V NYRN G++ S E T STM+RIVEKLKKFGYIDD + K + + VIEK
Sbjct: 121 QAVVNYRNRGDVSSSDSEEG-TSTSSGGSTMQRIVEKLKKFGYIDDDSNKNENMGGVIEK 179
Query: 2456 GSVEDIFYVEEGMLPNAKGGFSEESPLGVENVLGNGE-EVRFPWEKPMVKEEEEKSFSVR 2280
GS+EDIFYVEEG+LPN +GGFSEE P G EN + G EVRFPWEK + E++ S R
Sbjct: 180 GSIEDIFYVEEGLLPNTRGGFSEEFPFGDENGVARGNGEVRFPWEKDALGEQKRSLDSRR 239
Query: 2279 QKSRTSLAELTLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEIVRLKI 2100
+S LAELTLPE E+RRLTNLA RIKN+T+IGG+GVTQ +V+ I +KWK SE+VRLKI
Sbjct: 240 SRS---LAELTLPEPELRRLTNLALRIKNKTRIGGAGVTQQVVETIREKWKTSEVVRLKI 296
Query: 2099 EGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLRLTKRTYIKNDVPRNS 1920
EG PALNM+RMHEILERKTGGLVIWRSGTS++LYRG+ +E + +L KR + +N++P S
Sbjct: 297 EGPPALNMRRMHEILERKTGGLVIWRSGTSLALYRGVTYEDSATKLKKRIFRRNELPHKS 356
Query: 1919 ISTATDKTSGIASES---PCNAVHAPQTDSENTVEQEKNSESLPEVEYEDEVDRLLDGLG 1749
S ATDKT +SES P V +P++ S N +++ E+ EV YEDEVD+LLD LG
Sbjct: 357 HS-ATDKTGQDSSESGVLPDREVPSPESVSLNP--DDRDPETSSEVRYEDEVDKLLDSLG 413
Query: 1748 PRYVDWPGGDPLPVDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPPHF 1569
PRY DWPG DPLPVDADLLPG + GY+PPFR+LPYGVRSTLG+KEATALRRLARV+PPHF
Sbjct: 414 PRYTDWPGDDPLPVDADLLPGTVPGYRPPFRLLPYGVRSTLGMKEATALRRLARVLPPHF 473
Query: 1568 ALGRSRQHQGLAVAMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNKDF 1389
ALGRSRQHQGLA AMIKLWERSSIAKIALKRGV LTTSERMAE++K+LTG +LLSRNKDF
Sbjct: 474 ALGRSRQHQGLAAAMIKLWERSSIAKIALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDF 533
Query: 1388 LVFYRGKDFLSPEVAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGTLG 1209
LV+YRGKDFLSP+VAEALLEKERLAK LQDEEEQARLRA +L+ P +E TDE GTAGTL
Sbjct: 534 LVYYRGKDFLSPDVAEALLEKERLAKALQDEEEQARLRALALIAPAVEETDESGTAGTLK 593
Query: 1208 ETLDADARWGKRLDYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKVES 1029
ETLDAD RWGKRLD HKEKVM+EAEVLRHANLVRKLE KLAFAERKL KAER LSKVE
Sbjct: 594 ETLDADTRWGKRLDDVHKEKVMREAEVLRHANLVRKLENKLAFAERKLSKAERALSKVEE 653
Query: 1028 SLNPAELPQDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKV 849
SL PA+ QDPES+TDEERFMFRKLGLRMKAFLLLGRRGVF GTVENMHLHWKYRELVK+
Sbjct: 654 SLYPADRAQDPESLTDEERFMFRKLGLRMKAFLLLGRRGVFGGTVENMHLHWKYRELVKI 713
Query: 848 VVKAKSFDQVKKIALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLRPKNLLTKR 669
+VKA++ ++VK IAL+LEAESGGVLVSVDKVSKGYAI+VFRG+DYKRPS LRPKNLLTKR
Sbjct: 714 IVKAQNIEEVKNIALALEAESGGVLVSVDKVSKGYAIIVFRGRDYKRPSLLRPKNLLTKR 773
Query: 668 KALARSIELQRREALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLDSAYPT--X 495
KALARSIELQRREALLNH+S LQ +V+ LRSEI QMA V++ GDE+LY+KLDSAY T
Sbjct: 774 KALARSIELQRREALLNHMSTLQTRVNQLRSEIEQMAAVKEQGDEELYNKLDSAYLTEDE 833
Query: 494 XXXXXXXXXXXXENYXXXXXXXXXXDNSVHNLRLETKFPYDFQDQEPETE 345
Y ++SVHN L T FPYDFQ +E ETE
Sbjct: 834 DSEEEGDEEAYLGTYDSDNDMVDENNDSVHNTYLGTNFPYDFQ-EESETE 882
>emb|CDO99162.1| unnamed protein product [Coffea canephora]
Length = 871
Score = 1083 bits (2802), Expect = 0.0
Identities = 574/845 (67%), Positives = 679/845 (80%), Gaps = 19/845 (2%)
Frame = -3
Query: 2975 MALVPSRQFYP-TTTFLDSFQSSYKVHLTTRLQLLRYGCSIPFKKQNFYVSH-NTINSNS 2802
MALVP +QFYP TTF+DSFQSS KQ F++++ +T+NS+S
Sbjct: 1 MALVPIQQFYPRATTFMDSFQSS---------------------KQTFFIANKSTMNSDS 39
Query: 2801 ----SPRSKSNFMLKSGNSRWGFANETPISQSNPS-VSLSRNSWVDKWNETHQQNQP-KL 2640
+P+ +F ++ N W FA + SN S VSLSRNSW+DKWNETH+Q++ K
Sbjct: 40 IQRQNPQKSFDFDGRTKNKEWDFARKG----SNASEVSLSRNSWLDKWNETHKQDKKLKR 95
Query: 2639 PRPVFNYRNSGNLLSCGYERNNTXXXXXXSTMERIVEKLKKFGYIDDVNEKKDKVDRVIE 2460
P+ V NYRN+G + S E N +TMERIVEKLKKFGY+D+V +K + DRVIE
Sbjct: 96 PQVVLNYRNNGEVSSSDCEENG---GGTGTTMERIVEKLKKFGYVDNVTDKVGE-DRVIE 151
Query: 2459 KGSVEDIFYVEEGMLPNAKGGFSEESPLGVENVLGNGEEVRFPWEKPMVKEEEEKSFSVR 2280
+GS+EDIFY+EEG+LPN +GGFSE+SP G E+V+G+ EVRFPWEK VK++E +SVR
Sbjct: 152 RGSIEDIFYIEEGILPNTRGGFSEKSPFGDESVVGSDGEVRFPWEKDEVKDKER--YSVR 209
Query: 2279 QKSRTSLAELTLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEIVRLKI 2100
QKS+TS AELTLPESE+RRL N+A RIKN+T+IGG+GVTQ +V+ IH KWK SE+VRLK+
Sbjct: 210 QKSKTSFAELTLPESELRRLRNMALRIKNKTRIGGAGVTQEVVEKIHQKWKGSEVVRLKV 269
Query: 2099 EGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLRLTKRTYIKNDVPRN- 1923
EGAPALNM+RMHEILERKTGGLVIWRSGTSV+LYRG+ +E PS RL KR Y +N++P +
Sbjct: 270 EGAPALNMRRMHEILERKTGGLVIWRSGTSVALYRGVGYEAPSERLKKRIYKENEIPHDQ 329
Query: 1922 SISTATDKTSGIASESPCNAVHAPQ--TDSENTVEQEKNSESLPEVEYEDEVDRLLDGLG 1749
S++T ++ +PC+ VH P+ T + ++ S PEV+YEDEVD+LL GLG
Sbjct: 330 SLATTVSNSNDHLECNPCSNVHTPESVTSFSKDAGENRSIGSFPEVKYEDEVDKLLHGLG 389
Query: 1748 PRYVDWPGGDPLPVDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPPHF 1569
PRY DWPG PLPVDADLLP +I GYQ PFR+LPYGVRSTLG+KE TALRRLAR +PPHF
Sbjct: 390 PRYTDWPGAGPLPVDADLLPSVIPGYQRPFRLLPYGVRSTLGMKEGTALRRLARSLPPHF 449
Query: 1568 ALGRSRQHQGLAVAMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNKDF 1389
ALGRSRQHQGLAVAMIKLWERSSIAKIALKRGV LTTSERMAE+IK LTG +LLSRNKDF
Sbjct: 450 ALGRSRQHQGLAVAMIKLWERSSIAKIALKRGVQLTTSERMAEDIKNLTGGVLLSRNKDF 509
Query: 1388 LVFYRGKDFLSPEVAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGTLG 1209
LVFYRGK+FLSP+VAEALLEKERLAKTLQDEEE+ARL+AS+LV P I+DE GTAGTLG
Sbjct: 510 LVFYRGKNFLSPDVAEALLEKERLAKTLQDEEERARLKASALVTPSRVISDESGTAGTLG 569
Query: 1208 ETLDADARWGKRLDYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKVES 1029
ETLDADARWGK+LD K KVM+EAE+LRHANLVRKLE+KL FAERK+ KAER LSKVE
Sbjct: 570 ETLDADARWGKKLDDDLKAKVMREAEMLRHANLVRKLEKKLGFAERKISKAERALSKVEE 629
Query: 1028 SLNPAELPQDPESITDEERFMFRKLGLRMKAFLLLG--------RRGVFDGTVENMHLHW 873
+L PA+ D +SITDEERFMFRKLGLRMKAFLLLG RRGVFDGTVENMHLHW
Sbjct: 630 TLYPADRAADLQSITDEERFMFRKLGLRMKAFLLLGKKIFQNICRRGVFDGTVENMHLHW 689
Query: 872 KYRELVKVVVKAKSFDQVKKIALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLR 693
KYRELVK++VKAK+F++VK IALSLEAESGG+LVSVDKVSKGYAI+VFRGKDYKRPS+LR
Sbjct: 690 KYRELVKIIVKAKNFEEVKAIALSLEAESGGLLVSVDKVSKGYAIIVFRGKDYKRPSTLR 749
Query: 692 PKNLLTKRKALARSIELQRREALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLD 513
PKNLLTKRKALARSIELQRR+ALL HI+ LQ V+ +R+EI QMA V+D GDE+LYD+LD
Sbjct: 750 PKNLLTKRKALARSIELQRRQALLKHIARLQTNVEQIRAEIEQMANVKDQGDEELYDRLD 809
Query: 512 SAYPT 498
SAYPT
Sbjct: 810 SAYPT 814
>ref|XP_012473005.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Gossypium raimondii]
gi|763754573|gb|KJB21904.1| hypothetical protein
B456_004G020400 [Gossypium raimondii]
Length = 853
Score = 1073 bits (2776), Expect = 0.0
Identities = 558/871 (64%), Positives = 669/871 (76%), Gaps = 6/871 (0%)
Frame = -3
Query: 2951 FYPTTT----FLDSFQSSYKVHLTTRLQLLRYGCS-IPFKKQNFYVSHNTINSNSSPRSK 2787
F+PTTT FLDSFQ+S L RY S P K NF S + I SN+
Sbjct: 4 FHPTTTTKTTFLDSFQTSLSRFHGLPLPFFRYSSSHFPLKTLNFCASKHAITSNAQ---- 59
Query: 2786 SNFMLKSGNSRWGFANETPISQSNPSVSLSRNSWVDKWNETHQQNQPKLPRPVFNYRNSG 2607
+ P S++ + S N W+D WN+TH++N PK P+ VFNYR G
Sbjct: 60 --------------IHPNPESKTKAFPTFSSN-WLDNWNKTHKRNGPKPPKTVFNYRKDG 104
Query: 2606 NLLSCGYERNNTXXXXXXSTMERIVEKLKKFGYIDDVNEKKDKVDR-VIEKGSVEDIFYV 2430
NL S Y +++ STME+IVEKLKKFGYI + NE+K++ R VIE+GS+ED+FYV
Sbjct: 105 NLWSLSYSKSDNNGSGSSSTMEKIVEKLKKFGYIGEENEQKEEQPRKVIERGSIEDMFYV 164
Query: 2429 EEGMLPNAKGGFSEESPLGVENVLGNGEEVRFPWEKPMVKEEEEKSFSVRQKSRTSLAEL 2250
EEGMLPN +GGFS+ESPLG+E G+ E+ FPWEK +E+EE ++ R ++ SLAEL
Sbjct: 165 EEGMLPNTRGGFSKESPLGMETEFGSDGEIMFPWEKRK-EEQEEGKWTARGDNKASLAEL 223
Query: 2249 TLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEIVRLKIEGAPALNMKR 2070
TLPESE+RRL NL R K++ +I G+GVTQ +VD IH+KWK EIVRLK+EGAPALNMKR
Sbjct: 224 TLPESELRRLRNLTFRTKSKMRIKGAGVTQEVVDTIHEKWKTMEIVRLKVEGAPALNMKR 283
Query: 2069 MHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLRLTKRTYIKNDVPRNSISTATDKTSG 1890
MHEILERKTGGLVIWRSGTS+SLYRG+++EVPS+ L K+ Y +N++ S +DKT
Sbjct: 284 MHEILERKTGGLVIWRSGTSISLYRGVSYEVPSVHLNKQIYKRNEMSTYSSPLVSDKTED 343
Query: 1889 IASESPCNAVHAPQTDSENTVEQEKNSESLPEVEYEDEVDRLLDGLGPRYVDWPGGDPLP 1710
+ P V PQ++SE E+ KN+E LPE++YEDEVD+LL+GLGPRY DWPG DPLP
Sbjct: 344 PSGLVPHKDVAPPQSNSETATEEHKNTEPLPEIKYEDEVDKLLEGLGPRYADWPGCDPLP 403
Query: 1709 VDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPPHFALGRSRQHQGLAV 1530
VDADLLPGI+ GYQPPFR+LPYGVRS+LGVKEAT+LRRLARV+PPHFA+GRSRQ QGLAV
Sbjct: 404 VDADLLPGIVPGYQPPFRVLPYGVRSSLGVKEATSLRRLARVLPPHFAIGRSRQLQGLAV 463
Query: 1529 AMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNKDFLVFYRGKDFLSPE 1350
AM KLWE+SSIAKIALKRGV LTTSERMAE++KKLTG ILLSRNKDFLVFYRGK+FLS +
Sbjct: 464 AMTKLWEKSSIAKIALKRGVQLTTSERMAEDLKKLTGGILLSRNKDFLVFYRGKNFLSAD 523
Query: 1349 VAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGTLGETLDADARWGKRL 1170
VAEALLE+ERLAK+LQD EEQARLRAS+L E+ ++ G AGTLGETLDADARWGKRL
Sbjct: 524 VAEALLERERLAKSLQDVEEQARLRASALFAQSTEVAEQSGAAGTLGETLDADARWGKRL 583
Query: 1169 DYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKVESSLNPAELPQDPES 990
D HHKEKV++EAE+LRHANLVRKLE+ LAFAERKL+KAER LSKVE L PA+ DPES
Sbjct: 584 DDHHKEKVLKEAEILRHANLVRKLEKNLAFAERKLLKAERALSKVEDYLKPADRQADPES 643
Query: 989 ITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVVVKAKSFDQVKKI 810
ITDEERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVK+++KAK+FDQVKK+
Sbjct: 644 ITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIMKAKNFDQVKKV 703
Query: 809 ALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLRPKNLLTKRKALARSIELQRRE 630
A++LEAESGGVLVSVDK+SKGYAI+V+RGKDY+RPS++RPKNLLTKR+ALARSIELQRRE
Sbjct: 704 AIALEAESGGVLVSVDKISKGYAIIVYRGKDYERPSTIRPKNLLTKRRALARSIELQRRE 763
Query: 629 ALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLDSAYPTXXXXXXXXXXXXXENY 450
AL+ HIS LQ KV+ LRSEI QM ++ GDE+ YD+LDS+YP+ Y
Sbjct: 764 ALVKHISALQAKVEKLRSEIDQMHSMDARGDEEFYDRLDSSYPSDDDDDTEEEGDEA--Y 821
Query: 449 XXXXXXXXXXDNSVHNLRLETKFPYDFQDQE 357
+ +L LET FP+ Q QE
Sbjct: 822 LGTYDGENDGEEENDDLHLETNFPFHNQHQE 852
>gb|KHG05234.1| Chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Gossypium arboreum]
Length = 853
Score = 1070 bits (2766), Expect = 0.0
Identities = 560/875 (64%), Positives = 670/875 (76%), Gaps = 10/875 (1%)
Frame = -3
Query: 2951 FYPTTT----FLDSFQSSYKVHLTTRLQLLRYGC-SIPFKKQNFYVSHNTINSNS----S 2799
F+PTTT FLDSFQ+S RY P K NF +++TI SNS +
Sbjct: 4 FHPTTTTKTTFLDSFQTSLSRFHGLPHPFFRYSSFHFPLKTLNFCANNHTITSNSQIHPN 63
Query: 2798 PRSKSNFMLKSGNSRWGFANETPISQSNPSVSLSRNSWVDKWNETHQQNQPKLPRPVFNY 2619
P SK+ GF P SN W+D WN+TH++N PK P+ VFNY
Sbjct: 64 PESKTK----------GF----PTFSSN---------WLDNWNKTHKRNGPKPPKTVFNY 100
Query: 2618 RNSGNLLSCGYERNNTXXXXXXSTMERIVEKLKKFGYIDDVNEKKDKVDR-VIEKGSVED 2442
R GNL S Y +++ STME+IVEKLKKFGYI + NE+K++ R VIE+GS+ED
Sbjct: 101 RKDGNLWSLSYSKSDNNGSGSSSTMEKIVEKLKKFGYIGEENEQKEEQPRKVIERGSIED 160
Query: 2441 IFYVEEGMLPNAKGGFSEESPLGVENVLGNGEEVRFPWEKPMVKEEEEKSFSVRQKSRTS 2262
+FYVEEGMLPN +GGFS+ESPLG+E G+ E+ FPWEK +E+EE ++ R ++ S
Sbjct: 161 MFYVEEGMLPNTRGGFSKESPLGMETEFGSDGEIMFPWEKRK-EEQEEGKWTARGDNKAS 219
Query: 2261 LAELTLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEIVRLKIEGAPAL 2082
LAELTLPESE+RRL NL R K++ +I G+GVTQ +VD IH+KWK EIVRLK+EGAPAL
Sbjct: 220 LAELTLPESELRRLRNLTFRTKSKMRIKGAGVTQEVVDTIHEKWKTMEIVRLKVEGAPAL 279
Query: 2081 NMKRMHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLRLTKRTYIKNDVPRNSISTATD 1902
NMKRMHEILERKTGGLVIWRSGTS+SLYRG+++EVPS+ L K+ Y +N++ S +D
Sbjct: 280 NMKRMHEILERKTGGLVIWRSGTSISLYRGVSYEVPSVHLNKQIYKRNEMSTYSSPLVSD 339
Query: 1901 KTSGIASESPCNAVHAPQTDSENTVEQEKNSESLPEVEYEDEVDRLLDGLGPRYVDWPGG 1722
KT + P V PQT+SE E+ KN+E LPE++YEDEVD+LL+GLGPRY DWPG
Sbjct: 340 KTEDPSDLVPHKDVAPPQTNSETATEEHKNTEPLPEIKYEDEVDKLLEGLGPRYADWPGC 399
Query: 1721 DPLPVDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPPHFALGRSRQHQ 1542
DPLPVDADLLPGI+ GYQPPFR+LPYGVRS+LGVKEAT+LRRLARV+PPHFALGRSRQ Q
Sbjct: 400 DPLPVDADLLPGIVPGYQPPFRVLPYGVRSSLGVKEATSLRRLARVLPPHFALGRSRQLQ 459
Query: 1541 GLAVAMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNKDFLVFYRGKDF 1362
GLAVAM KLWE+SSIAKIALKRGV LTTSERMAE++KKLTG ILLSRNKDFLVFYRGK+F
Sbjct: 460 GLAVAMTKLWEKSSIAKIALKRGVQLTTSERMAEDLKKLTGGILLSRNKDFLVFYRGKNF 519
Query: 1361 LSPEVAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGTLGETLDADARW 1182
LS +VAEALLE+ERLAK+LQD EEQARLRAS+L E+ ++ G AGTLGETLDADARW
Sbjct: 520 LSADVAEALLERERLAKSLQDVEEQARLRASALFAQSTEVAEQSGAAGTLGETLDADARW 579
Query: 1181 GKRLDYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKVESSLNPAELPQ 1002
GKRLD HHKEKV++EAE+LRHANLVRKLE+ LAFAERKL+KAE+ LSKVE L PA+
Sbjct: 580 GKRLDDHHKEKVLKEAEILRHANLVRKLEKNLAFAERKLLKAEQALSKVEDYLKPADRQA 639
Query: 1001 DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVVVKAKSFDQ 822
DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVK+++KAK+FDQ
Sbjct: 640 DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIMKAKNFDQ 699
Query: 821 VKKIALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLRPKNLLTKRKALARSIEL 642
VKK+A++LEAESGGVLVSVDK+SKGYAI+V+RG DY+RPS++RPKNLLTKR+ALARSIEL
Sbjct: 700 VKKVAIALEAESGGVLVSVDKISKGYAIIVYRGNDYERPSTIRPKNLLTKRRALARSIEL 759
Query: 641 QRREALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLDSAYPTXXXXXXXXXXXX 462
QRREAL+ HIS LQ KV+ +RSEI QM ++ GDE+ YD+LDS+YP+
Sbjct: 760 QRREALVKHISALQAKVEKIRSEIDQMHSMDARGDEEFYDRLDSSYPSDDDDDTEEEGDE 819
Query: 461 XENYXXXXXXXXXXDNSVHNLRLETKFPYDFQDQE 357
Y + +L LET FP+ Q QE
Sbjct: 820 A--YLGTYDGENDGEEENDDLHLETNFPFHNQHQE 852
>ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 852
Score = 1069 bits (2764), Expect = 0.0
Identities = 567/879 (64%), Positives = 682/879 (77%), Gaps = 8/879 (0%)
Frame = -3
Query: 2975 MALVPSRQFYPTTTFLDSFQSSYKVHLTTRLQLLRYGCSIPFKKQNFYVSHNTINSNSSP 2796
M LVPSRQ YPT+ S + H L RY SIPFKKQ+F+ + I S+ +P
Sbjct: 1 MTLVPSRQLYPTSLLESSLSKFHGTHF----HLFRYS-SIPFKKQSFHATQYFITSSLTP 55
Query: 2795 RSKSNFMLKSGNSRWGFANETPISQSNPSVSLSRNSWVDKWNETHQQNQPKLPRPVFNYR 2616
L I Q P+ +LS SW+D+WN++ +Q+ P+ PR V +Y+
Sbjct: 56 EQNPPRKLN-----------LLICQYKPTKNLSSCSWIDRWNDSRKQHGPRRPRAVLDYQ 104
Query: 2615 N--SGNLLSCGYERNNTXXXXXXSTMERIVEKLKKFGYI-DDVNEKKDKV-DRVIEKGSV 2448
+ SGNL S G + +T M++IVEKLKKFGYI +D NE + +V +RVIEKGSV
Sbjct: 105 SNESGNLSSDGNDGGST--------MDKIVEKLKKFGYIAEDKNEGRGEVRERVIEKGSV 156
Query: 2447 EDIFYVEEGMLPNAKGGFSEESPLGVENVLGNGE-EVRFPWEKPMVKEEEEKSFSVRQKS 2271
EDIFYVEEGMLPN++GGFS SPLG E+V G+G EVRFPWEKP +E+EE S+R++S
Sbjct: 157 EDIFYVEEGMLPNSRGGFSGVSPLGTEDVFGDGGGEVRFPWEKPREREKEEGG-SIRRRS 215
Query: 2270 RTSLAELTLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEIVRLKIEGA 2091
RTSLAELTLPESE+RRL NL + K++TKIGG+GVTQ++V++IH++WK +EIVRLKIEG
Sbjct: 216 RTSLAELTLPESELRRLRNLTFQKKHKTKIGGAGVTQAVVEMIHERWKTAEIVRLKIEGP 275
Query: 2090 PALNMKRMHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLRLTKRTYIKNDVPRNSIST 1911
PALNMKRMHEILERKTGGLV+WRSGTS+SLYRG+++EVPS++L K+ + +N++ S+ T
Sbjct: 276 PALNMKRMHEILERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLNKQIFKRNEISSTSLPT 335
Query: 1910 ATDKTSGIASESPC---NAVHAPQTDSENTVEQEKNSESLPEVEYEDEVDRLLDGLGPRY 1740
DK+ +A C + V P SEN ++ +++E LPEV+YEDEVD LLD +GPR+
Sbjct: 336 VADKS--VAEPYVCATYSNVKTPLEMSENASQETEDTEQLPEVKYEDEVDELLDSIGPRF 393
Query: 1739 VDWPGGDPLPVDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPPHFALG 1560
DWPG DPLPVDAD+LPGI+ G+QPPFRILPYGVRSTLG+KEAT+LRRLARV+PPHFALG
Sbjct: 394 KDWPGCDPLPVDADMLPGIVPGFQPPFRILPYGVRSTLGLKEATSLRRLARVLPPHFALG 453
Query: 1559 RSRQHQGLAVAMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNKDFLVF 1380
R+RQ QGLAVAM KLWERS IAKIALKRGV LTTSERMAE+IKKLTG +LLSRNKDFLVF
Sbjct: 454 RNRQLQGLAVAMSKLWERSLIAKIALKRGVQLTTSERMAEDIKKLTGGVLLSRNKDFLVF 513
Query: 1379 YRGKDFLSPEVAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGTLGETL 1200
YRGK+FLS EV EAL+E+ERLAK+LQDEEEQARLRAS++V+P IE +GTAGTLGETL
Sbjct: 514 YRGKNFLSAEVTEALVERERLAKSLQDEEEQARLRASAMVMPSIEPAQHFGTAGTLGETL 573
Query: 1199 DADARWGKRLDYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKVESSLN 1020
DADA+WGKRLD HHKEKV QEA +LRHA LVRKLE+KLAFAERKLM AE+ LSKVE SL
Sbjct: 574 DADAKWGKRLDVHHKEKVTQEAGILRHAKLVRKLEQKLAFAERKLMGAEQALSKVEESLK 633
Query: 1019 PAELPQDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVVVK 840
P++ DPESITDEERFMFRKLGL+MKAFLLLGRRGVFDGTVENMHLHWKYRELVK++V
Sbjct: 634 PSKQQADPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIMVN 693
Query: 839 AKSFDQVKKIALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLRPKNLLTKRKAL 660
AK+FDQVKKIAL+LEAESGGVLVSVDKVSK YAI+V+RG DY+RPS LRPKNLLTKRKAL
Sbjct: 694 AKNFDQVKKIALALEAESGGVLVSVDKVSKKYAIIVYRGNDYQRPSMLRPKNLLTKRKAL 753
Query: 659 ARSIELQRREALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLDSAYPTXXXXXX 480
ARSIELQR+EALL HI+ +Q++VD LRSEI QM V+ GDE LY+KLDS YPT
Sbjct: 754 ARSIELQRQEALLKHIAAVQSRVDRLRSEIEQMDTVKHHGDEALYNKLDSCYPTDYEDTE 813
Query: 479 XXXXXXXENYXXXXXXXXXXDNSVHNLRLETKFPYDFQD 363
E Y +SVH+ LE +F + F +
Sbjct: 814 EEGDAYLETYSSKNDGEEDSTSSVHSTSLENQFSFSFPE 852
>ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma cacao]
gi|508714005|gb|EOY05902.1| CRM family member 3A isoform
3 [Theobroma cacao]
Length = 856
Score = 1066 bits (2757), Expect = 0.0
Identities = 561/895 (62%), Positives = 680/895 (75%), Gaps = 14/895 (1%)
Frame = -3
Query: 2975 MALVPSRQFYPTTT----FLDSFQSSYKVHLTTRLQLLRYGCS-IPFKKQNFYVSHNTIN 2811
M L+P+RQF+P TT FLDSFQ+ L Y S P K Y ++ T+
Sbjct: 1 MTLLPTRQFHPATTTKSTFLDSFQTRLSKFHGLPLPFCSYDSSNFPLKTSTLYAANYTVT 60
Query: 2810 SNSS----PRSKSNFMLKSGNSRWGFANETPISQSNPSVSLSRNSWVDKWNETHQQNQPK 2643
SNS P+SK+ F + P +SN W+D WN+TH+ PK
Sbjct: 61 SNSLFHQYPKSKTK----------AFPTKDPTFRSN---------WLDSWNKTHKGFGPK 101
Query: 2642 LPRPVFNYRNSGNLLSCGYERNNTXXXXXXSTMERIVEKLKKFGYIDDVNEKKDKVD--- 2472
P+ VFNYR G++ S Y +++ STME+IVEKLKKFGYI + NE+K+K +
Sbjct: 102 PPKTVFNYRKKGDVWSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEP 161
Query: 2471 -RVIEKGSVEDIFYVEEGMLPNAKGGFSEESPLGVENVLGNGEEVRFPWEKPMVKEEEEK 2295
RVIE+GS+EDIFYVEEGMLPN +GGFS+ESPLG+ENV G+ EVRFPWEK ++EEE
Sbjct: 162 KRVIERGSIEDIFYVEEGMLPNNRGGFSKESPLGMENVFGSDGEVRFPWEKRK-EDEEEG 220
Query: 2294 SFSVRQKSRTSLAELTLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEI 2115
++ R+ S+TSLAELTLPESE+RRL NL R K++ +I G+GVTQ +VD IH+KWK EI
Sbjct: 221 GWTARRDSKTSLAELTLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEI 280
Query: 2114 VRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLRLTKRTYIKND 1935
VRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRG+++EVPS+ L+KR Y +N+
Sbjct: 281 VRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSKRIYKRNE 340
Query: 1934 VPRNSISTATDKTSGIASESPCNAVHAPQTDSENTVEQEKNSESLPEVEYEDEVDRLLDG 1755
++ + +DKT ++S V +PQ +SE E K++ESLPE+ YEDEVD+LL+G
Sbjct: 341 TFTYALPSVSDKTKDLSSLGSHKDVVSPQANSETAAEGNKDTESLPEIRYEDEVDKLLEG 400
Query: 1754 LGPRYVDWPGGDPLPVDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPP 1575
LGPRY DWPG +PLPVDADLLPGI+ GYQPPFR+LPYGVRS+LG+KEAT+LRRLARV+PP
Sbjct: 401 LGPRYTDWPGCNPLPVDADLLPGIVAGYQPPFRVLPYGVRSSLGLKEATSLRRLARVLPP 460
Query: 1574 HFALGRSRQHQGLAVAMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNK 1395
HFA+GRSRQ QGLAVAMIKLWE+SSIAKIALKRGV LTTSERMAE+IKKLTG +LLSRNK
Sbjct: 461 HFAIGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGMLLSRNK 520
Query: 1394 DFLVFYRGKDFLSPEVAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGT 1215
DFLVFYRGK+FLS +VAEAL+E+ERLAK+LQDEEEQARLRAS+ ++P E+ ++ G AGT
Sbjct: 521 DFLVFYRGKNFLSADVAEALVERERLAKSLQDEEEQARLRASAFLVPSTEVAEQSGAAGT 580
Query: 1214 LGETLDADARWGKRLDYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKV 1035
LGETLDADARWGKRLD HHKEKVM+EAE+LRHANLVRKL++ LAFA+RKL+KAER L+KV
Sbjct: 581 LGETLDADARWGKRLDNHHKEKVMKEAEILRHANLVRKLDKNLAFADRKLLKAERALTKV 640
Query: 1034 ESSLNPAELPQDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELV 855
E L PA+ DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELV
Sbjct: 641 EDYLKPADRQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELV 700
Query: 854 KVVVKAKSFDQVKKIALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLRPKNLLT 675
K+++KAK+FDQVKK+AL+LEAESGGVLVSVD++SKGYAI+V+RGKDY+RPS++RPKNLLT
Sbjct: 701 KIIMKAKTFDQVKKVALALEAESGGVLVSVDRISKGYAIIVYRGKDYQRPSTIRPKNLLT 760
Query: 674 KRKALARSIELQRREALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLDSAYPT- 498
KR+ALARSIELQRRE QM +E+ GDE+ YD+LDS+YPT
Sbjct: 761 KRRALARSIELQRRE--------------------DQMHSMEEQGDEEFYDRLDSSYPTD 800
Query: 497 XXXXXXXXXXXXXENYXXXXXXXXXXDNSVHNLRLETKFPYDFQDQEPETEAGVD 333
E Y D +HNL LETKFP F DQ + E+G++
Sbjct: 801 DDDTEEEGDEAYLETYESENDAEEENDELIHNLHLETKFP--FHDQHHQ-ESGIE 852
>ref|XP_011030575.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X2 [Populus euphratica]
Length = 891
Score = 1064 bits (2751), Expect = 0.0
Identities = 570/905 (62%), Positives = 684/905 (75%), Gaps = 17/905 (1%)
Frame = -3
Query: 2975 MALVPSRQFYPTTTFLDSFQSSYKVHLTTRLQLLRYGCSIPFKKQNFYVSHNTINSNSSP 2796
MALVPSRQ Y +DSFQSS+ T LQ RY S P + + Y +I + P
Sbjct: 1 MALVPSRQLY-----IDSFQSSFSKFHGTPLQFFRYSSSFPLRSHSGYAC--SITDKNPP 53
Query: 2795 RSKSNFMLKSGNSRWGFANETPISQSNPSVSLSRNSWVDKWNETHQQNQPKLPRPVFNYR 2616
R + F P + + +SW WN+ ++QN P+ P+ VF+YR
Sbjct: 54 RKSTAF---------------PTDKPKTLNLSTGSSWFFNWNKPNKQNLPRPPQAVFDYR 98
Query: 2615 NSGNLLSCGYERNNTXXXXXXSTMERIVEKLKKFGYID-DVNEKKDKV-DRVIEKGSVED 2442
+ NN+ STME+IVEKLKK GY+D DVNE K+++ +RVIEKGSVED
Sbjct: 99 S-----------NNSISSGSGSTMEKIVEKLKKHGYMDGDVNENKERMQERVIEKGSVED 147
Query: 2441 IFYVEEGMLPNAKGGFSEESPLGVENVLGNGEEVRFPWEKPMVKEEEEKSFSVRQKSRTS 2262
IFYVEEGMLPNA+GGFS+ESPLGVE+V + EVRFPWEKP KEE+E ++ R KSRTS
Sbjct: 148 IFYVEEGMLPNARGGFSKESPLGVEDVFRSDGEVRFPWEKPK-KEEDEGKWTARSKSRTS 206
Query: 2261 LAELTLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEIVRLKIEGAPAL 2082
LAELTLPESE+RRL NL + K++T++GG GVTQ +VD IHDKWK SEI R+K+EGAPAL
Sbjct: 207 LAELTLPESELRRLRNLTYGTKSKTRVGGRGVTQEVVDAIHDKWKTSEIARVKVEGAPAL 266
Query: 2081 NMKRMHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLRLTKRTYIKNDVPRNSISTATD 1902
NMKRMHEILE+KTGGLVIWRSG +VSLYRG+++E P+L+ KR + K + N + AT
Sbjct: 267 NMKRMHEILEKKTGGLVIWRSGATVSLYRGVSYEDPALKWKKRIFKKKETSSNFLPAATS 326
Query: 1901 KTSGIASE-SPCNAVHAPQTDSENTVE--QEKNSESLPEVEYEDEVDRLLDGLGPRYVDW 1731
T G S+ SP N +HAP+ +E VE +K +E+ + +YEDEVD+LLDGLGPRY DW
Sbjct: 327 ITIGSQSKHSPDNEIHAPRPKTEINVEAANQKETETQTDAKYEDEVDKLLDGLGPRYTDW 386
Query: 1730 PGGDPLPVDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPPHFALGRSR 1551
PG DPLPVDAD+LPG+I GYQPPFRILPYGVR TLG +++T+LRRLARV+PPHFALGRSR
Sbjct: 387 PGLDPLPVDADMLPGVIPGYQPPFRILPYGVRPTLGRQDSTSLRRLARVLPPHFALGRSR 446
Query: 1550 QHQGLAVAMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNKDFLVFYRG 1371
Q QGLAVAMIKLWE+SSI K+ALKRGV LTTSERMAE+IKKLTG +LLSRNKDFLVFYRG
Sbjct: 447 QLQGLAVAMIKLWEKSSIVKVALKRGVQLTTSERMAEDIKKLTGGLLLSRNKDFLVFYRG 506
Query: 1370 KDFLSPEVAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGTLGETLDAD 1191
KDFLSPEV EALLE+ERLAK+LQDEEEQARLRAS+LVIP EI +E G AG+L ETLDAD
Sbjct: 507 KDFLSPEVTEALLERERLAKSLQDEEEQARLRASALVIPNDEIMEESGIAGSLEETLDAD 566
Query: 1190 ARWGKRLDYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKVESSLNPAE 1011
A+WGKRLD HKEK+++EAE++RHA++VR+LE+KLAFA+RKL +AER L+KVE LNP+E
Sbjct: 567 AKWGKRLDDCHKEKIIREAEMVRHASIVRRLEKKLAFAQRKLRRAERALNKVEGFLNPSE 626
Query: 1010 LPQDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVVVKAKS 831
DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK+++KAKS
Sbjct: 627 RQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIILKAKS 686
Query: 830 FDQVKKIALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLRPKNLLTKRKALARS 651
F+QVKKIAL+LEAESGGVLVSVDK+SKGYAI+V+RGKDY+RPS LRPKNLLTKRKALARS
Sbjct: 687 FEQVKKIALALEAESGGVLVSVDKISKGYAIIVYRGKDYQRPSMLRPKNLLTKRKALARS 746
Query: 650 IELQRREALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLDSAYPT-----XXXX 486
IE+QR EAL NH+S L+ KV+ +RSEI QM IV+D GDE+LYD+LDSAY T
Sbjct: 747 IEIQRSEALQNHVSALEIKVEKIRSEIEQMGIVKDKGDEELYDRLDSAYLTDDDADDTED 806
Query: 485 XXXXXXXXXENYXXXXXXXXXXDNSVHNLRLETKFPYDFQDQEPETE-------AGVDEV 327
N D++VHN L+T + Q QE ET+ G D+
Sbjct: 807 EGDEAYLETYNSENDVDYDDETDSTVHNAHLDTNLLNNVQIQESETDYYGDEVYLGTDDS 866
Query: 326 EKEDR 312
E +DR
Sbjct: 867 ESDDR 871
>ref|XP_009614939.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Nicotiana tomentosiformis]
Length = 856
Score = 1064 bits (2751), Expect = 0.0
Identities = 554/832 (66%), Positives = 659/832 (79%), Gaps = 6/832 (0%)
Frame = -3
Query: 2975 MALVPSRQFYPTTTFLDSFQSSYKVHLTTRLQLLRYGCSIPFKKQNFYVSH-NTINSN-- 2805
MALVPS QFYP TT RL LRY IPFKK NF+ H N +N +
Sbjct: 1 MALVPSHQFYPRTT---------------RLSFLRYNSIIPFKKSNFHTLHDNIVNQDCI 45
Query: 2804 --SSPRSKSNFMLKSGNSRWGFANETPISQSNPSVSLSRNSWVDKWNETHQQNQPKLPRP 2631
+P SNF+LK+ + W + + S S +SW+ KWNETH + + K P+
Sbjct: 46 FKKTPPKISNFVLKNKSKTWNLSPKA-------SASNLCSSWLGKWNETHNEIKLKKPQI 98
Query: 2630 VFNYRNSGNLLSCGYERNNTXXXXXXSTMERIVEKLKKFGYIDDVNEKKDKVDRVIEKGS 2451
V +YRN+G+ YE ++ STM+RIVEKLKKFGY+D+ +K KV R +EKGS
Sbjct: 99 VLSYRNNGDTSGSDYEESS---GGGSSTMDRIVEKLKKFGYVDEAKQKDKKVIRDVEKGS 155
Query: 2450 VEDIFYVEEGMLPNAKGGFSEESPLGVENVLGNGEEVRFPWEKPMVKEEEEKSFSVRQKS 2271
+EDIF+VEEG+LPN +GGFSEESP G ENV V+FPWEKP+VKEEE + S+ +S
Sbjct: 156 IEDIFFVEEGILPNVRGGFSEESPFGDENVFVKDGVVKFPWEKPLVKEEEGIN-SMSSRS 214
Query: 2270 RTSLAELTLPESEVRRLTNLAHRIKNRTKIGGSGVTQSIVDLIHDKWKASEIVRLKIEGA 2091
RT LAELTLP SE+RRLTNLA RIKN+T+I G+GVTQ +V+ I +KW SE+VRLK+EGA
Sbjct: 215 RTHLAELTLPASELRRLTNLALRIKNKTRISGAGVTQQVVETIREKWNTSEVVRLKVEGA 274
Query: 2090 PALNMKRMHEILERKTGGLVIWRSGTSVSLYRGLNFEVPSLRLTKRTYIKNDVPRNSIST 1911
PALNMKRMHEILERKTGGLVIWRSG+SV+LYRG+++E PS R+ KR ++++ +
Sbjct: 275 PALNMKRMHEILERKTGGLVIWRSGSSVALYRGVSYETPSERMKKRIMRRDEIRHKNSPI 334
Query: 1910 ATDKTSGIASE-SPCNAVHAPQTDSENTVEQEKNSESLPEVEYEDEVDRLLDGLGPRYVD 1734
D+++ SE SP + ++ + +S NT E+ N PEV YEDEVD+LLDGLGPRY D
Sbjct: 335 VDDESNQNPSETSPRSDMNPLRPESANTSEENGNIVRQPEVNYEDEVDKLLDGLGPRYTD 394
Query: 1733 WPGGDPLPVDADLLPGIILGYQPPFRILPYGVRSTLGVKEATALRRLARVIPPHFALGRS 1554
WPG +PLP+DADLLPG++ GYQPP+R+LPYG+RSTLG KEATALRRLAR++PPHFALGRS
Sbjct: 395 WPGAEPLPLDADLLPGLVPGYQPPYRLLPYGLRSTLGTKEATALRRLARILPPHFALGRS 454
Query: 1553 RQHQGLAVAMIKLWERSSIAKIALKRGVMLTTSERMAEEIKKLTGSILLSRNKDFLVFYR 1374
RQHQGLA AMIKLW+RSSIAKIA+KRGV LTTSERMAE+IKKLTG +LLSRNKDFLVFYR
Sbjct: 455 RQHQGLASAMIKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYR 514
Query: 1373 GKDFLSPEVAEALLEKERLAKTLQDEEEQARLRASSLVIPCIEITDEYGTAGTLGETLDA 1194
GKDFLSPEVAEALLEKERLAKTLQDEEEQARLRAS + + I+D TAGTLGETLDA
Sbjct: 515 GKDFLSPEVAEALLEKERLAKTLQDEEEQARLRASVSLTVGVAISDSSRTAGTLGETLDA 574
Query: 1193 DARWGKRLDYHHKEKVMQEAEVLRHANLVRKLERKLAFAERKLMKAERVLSKVESSLNPA 1014
DARWGKRLD KE VM+EAE++RHA+LVRKLE+KLAFAERKL+KAERVLSKVE +LNP
Sbjct: 575 DARWGKRLDDKDKENVMREAEIVRHADLVRKLEKKLAFAERKLVKAERVLSKVEETLNPL 634
Query: 1013 ELPQDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVVVKAK 834
+ +P+S+TDEERFMFRKLGLRMKAFLLLGRRG+FDGTVENMHLHWKYRELVK++VKAK
Sbjct: 635 DRRAEPDSLTDEERFMFRKLGLRMKAFLLLGRRGIFDGTVENMHLHWKYRELVKIMVKAK 694
Query: 833 SFDQVKKIALSLEAESGGVLVSVDKVSKGYAILVFRGKDYKRPSSLRPKNLLTKRKALAR 654
+F+QV KIAL+LEAESGGVLVSVDKVSKGYAI+VFRGKDY RP +LRPKNLLTKRKALAR
Sbjct: 695 NFEQVSKIALALEAESGGVLVSVDKVSKGYAIIVFRGKDYSRPPTLRPKNLLTKRKALAR 754
Query: 653 SIELQRREALLNHISILQNKVDNLRSEIGQMAIVEDLGDEKLYDKLDSAYPT 498
SIELQRREALL HIS +Q +V L +EI Q+A V+D GD++LYDKLDSAY T
Sbjct: 755 SIELQRREALLKHISTVQTRVQQLTAEIEQLASVKDSGDDELYDKLDSAYST 806