BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00006472
         (330 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010277937.1| PREDICTED: heterogeneous nuclear ribonucleop...    64   4e-08
ref|XP_010277936.1| PREDICTED: heterogeneous nuclear ribonucleop...    64   4e-08
ref|XP_010646145.1| PREDICTED: heterogeneous nuclear ribonucleop...    56   9e-06
ref|XP_003635003.2| PREDICTED: heterogeneous nuclear ribonucleop...    56   9e-06

>ref|XP_010277937.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
           isoform X2 [Nelumbo nucifera]
          Length = 689

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 42/116 (36%), Positives = 54/116 (46%), Gaps = 12/116 (10%)
 Frame = -1

Query: 318 VPVTGGHWQSSHPSQPPLNYGYQSPGQANSAYLGAGPPGRTESFSSAYQANQSPPPALRD 139
           +P   GHW++SH   P  +Y Y+ P Q N  Y G    G+ E     YQ+  S P   RD
Sbjct: 462 LPAPSGHWKNSHSPLPQPDYDYRRPQQMNPTYSGTALHGKPEYSLGEYQSGLSNPSIPRD 521

Query: 138 VPFVNYSSTGGS-LHRDDFKDYG----------SYGAYD-HRRNDNASRIAIPGGA 7
            P   YS+ G S L RDD   +G           YG  D + R+   SR AIP G+
Sbjct: 522 SPHGTYSNYGRSFLPRDDSNAHGYGKDDLFGRPDYGGIDPYNRSGLESRSAIPVGS 577


>ref|XP_010277936.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
           isoform X1 [Nelumbo nucifera]
          Length = 702

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 42/116 (36%), Positives = 54/116 (46%), Gaps = 12/116 (10%)
 Frame = -1

Query: 318 VPVTGGHWQSSHPSQPPLNYGYQSPGQANSAYLGAGPPGRTESFSSAYQANQSPPPALRD 139
           +P   GHW++SH   P  +Y Y+ P Q N  Y G    G+ E     YQ+  S P   RD
Sbjct: 475 LPAPSGHWKNSHSPLPQPDYDYRRPQQMNPTYSGTALHGKPEYSLGEYQSGLSNPSIPRD 534

Query: 138 VPFVNYSSTGGS-LHRDDFKDYG----------SYGAYD-HRRNDNASRIAIPGGA 7
            P   YS+ G S L RDD   +G           YG  D + R+   SR AIP G+
Sbjct: 535 SPHGTYSNYGRSFLPRDDSNAHGYGKDDLFGRPDYGGIDPYNRSGLESRSAIPVGS 590


>ref|XP_010646145.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
           isoform X2 [Vitis vinifera]
          Length = 664

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 44/120 (36%), Positives = 53/120 (44%), Gaps = 23/120 (19%)
 Frame = -1

Query: 291 SSHPSQPPLNYGYQSPGQANSAYLGAGPPGRTESFSSAYQANQSPPPALRDVPF-VNYSS 115
           S HP  P  NY YQ P   NS + G    GR E F  AYQ NQ+P    RD P+  +   
Sbjct: 445 SYHPPLPQ-NYYYQRPAHMNSGHQGVALHGRVEPFPRAYQDNQNPFMP-RDAPYETSLGY 502

Query: 114 TGGSLHRDDFKDYGSYGAYD----------------------HRRNDNASRIAIPGGATD 1
           +   L R+D   YG+YG YD                      +RR +  SR  IP GATD
Sbjct: 503 SRNFLSRNDSNSYGTYG-YDNSRGSIPGVGMASYQSFGMVDPYRRTNLESRNPIPMGATD 561


>ref|XP_003635003.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
           isoform X1 [Vitis vinifera] gi|302144182|emb|CBI23309.3|
           unnamed protein product [Vitis vinifera]
          Length = 703

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 44/120 (36%), Positives = 53/120 (44%), Gaps = 23/120 (19%)
 Frame = -1

Query: 291 SSHPSQPPLNYGYQSPGQANSAYLGAGPPGRTESFSSAYQANQSPPPALRDVPF-VNYSS 115
           S HP  P  NY YQ P   NS + G    GR E F  AYQ NQ+P    RD P+  +   
Sbjct: 484 SYHPPLPQ-NYYYQRPAHMNSGHQGVALHGRVEPFPRAYQDNQNPFMP-RDAPYETSLGY 541

Query: 114 TGGSLHRDDFKDYGSYGAYD----------------------HRRNDNASRIAIPGGATD 1
           +   L R+D   YG+YG YD                      +RR +  SR  IP GATD
Sbjct: 542 SRNFLSRNDSNSYGTYG-YDNSRGSIPGVGMASYQSFGMVDPYRRTNLESRNPIPMGATD 600