BLASTX nr result
ID: Cornus23_contig00006472
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cornus23_contig00006472 (330 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_010277937.1| PREDICTED: heterogeneous nuclear ribonucleop... 64 4e-08 ref|XP_010277936.1| PREDICTED: heterogeneous nuclear ribonucleop... 64 4e-08 ref|XP_010646145.1| PREDICTED: heterogeneous nuclear ribonucleop... 56 9e-06 ref|XP_003635003.2| PREDICTED: heterogeneous nuclear ribonucleop... 56 9e-06 >ref|XP_010277937.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X2 [Nelumbo nucifera] Length = 689 Score = 63.9 bits (154), Expect = 4e-08 Identities = 42/116 (36%), Positives = 54/116 (46%), Gaps = 12/116 (10%) Frame = -1 Query: 318 VPVTGGHWQSSHPSQPPLNYGYQSPGQANSAYLGAGPPGRTESFSSAYQANQSPPPALRD 139 +P GHW++SH P +Y Y+ P Q N Y G G+ E YQ+ S P RD Sbjct: 462 LPAPSGHWKNSHSPLPQPDYDYRRPQQMNPTYSGTALHGKPEYSLGEYQSGLSNPSIPRD 521 Query: 138 VPFVNYSSTGGS-LHRDDFKDYG----------SYGAYD-HRRNDNASRIAIPGGA 7 P YS+ G S L RDD +G YG D + R+ SR AIP G+ Sbjct: 522 SPHGTYSNYGRSFLPRDDSNAHGYGKDDLFGRPDYGGIDPYNRSGLESRSAIPVGS 577 >ref|XP_010277936.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1 [Nelumbo nucifera] Length = 702 Score = 63.9 bits (154), Expect = 4e-08 Identities = 42/116 (36%), Positives = 54/116 (46%), Gaps = 12/116 (10%) Frame = -1 Query: 318 VPVTGGHWQSSHPSQPPLNYGYQSPGQANSAYLGAGPPGRTESFSSAYQANQSPPPALRD 139 +P GHW++SH P +Y Y+ P Q N Y G G+ E YQ+ S P RD Sbjct: 475 LPAPSGHWKNSHSPLPQPDYDYRRPQQMNPTYSGTALHGKPEYSLGEYQSGLSNPSIPRD 534 Query: 138 VPFVNYSSTGGS-LHRDDFKDYG----------SYGAYD-HRRNDNASRIAIPGGA 7 P YS+ G S L RDD +G YG D + R+ SR AIP G+ Sbjct: 535 SPHGTYSNYGRSFLPRDDSNAHGYGKDDLFGRPDYGGIDPYNRSGLESRSAIPVGS 590 >ref|XP_010646145.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X2 [Vitis vinifera] Length = 664 Score = 56.2 bits (134), Expect = 9e-06 Identities = 44/120 (36%), Positives = 53/120 (44%), Gaps = 23/120 (19%) Frame = -1 Query: 291 SSHPSQPPLNYGYQSPGQANSAYLGAGPPGRTESFSSAYQANQSPPPALRDVPF-VNYSS 115 S HP P NY YQ P NS + G GR E F AYQ NQ+P RD P+ + Sbjct: 445 SYHPPLPQ-NYYYQRPAHMNSGHQGVALHGRVEPFPRAYQDNQNPFMP-RDAPYETSLGY 502 Query: 114 TGGSLHRDDFKDYGSYGAYD----------------------HRRNDNASRIAIPGGATD 1 + L R+D YG+YG YD +RR + SR IP GATD Sbjct: 503 SRNFLSRNDSNSYGTYG-YDNSRGSIPGVGMASYQSFGMVDPYRRTNLESRNPIPMGATD 561 >ref|XP_003635003.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1 [Vitis vinifera] gi|302144182|emb|CBI23309.3| unnamed protein product [Vitis vinifera] Length = 703 Score = 56.2 bits (134), Expect = 9e-06 Identities = 44/120 (36%), Positives = 53/120 (44%), Gaps = 23/120 (19%) Frame = -1 Query: 291 SSHPSQPPLNYGYQSPGQANSAYLGAGPPGRTESFSSAYQANQSPPPALRDVPF-VNYSS 115 S HP P NY YQ P NS + G GR E F AYQ NQ+P RD P+ + Sbjct: 484 SYHPPLPQ-NYYYQRPAHMNSGHQGVALHGRVEPFPRAYQDNQNPFMP-RDAPYETSLGY 541 Query: 114 TGGSLHRDDFKDYGSYGAYD----------------------HRRNDNASRIAIPGGATD 1 + L R+D YG+YG YD +RR + SR IP GATD Sbjct: 542 SRNFLSRNDSNSYGTYG-YDNSRGSIPGVGMASYQSFGMVDPYRRTNLESRNPIPMGATD 600