BLASTX nr result
ID: Cornus23_contig00006228
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00006228
(341 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009362585.1| PREDICTED: pentatricopeptide repeat-containi... 66 9e-09
ref|XP_008237850.1| PREDICTED: pentatricopeptide repeat-containi... 65 2e-08
ref|XP_007204940.1| hypothetical protein PRUPE_ppa001240mg [Prun... 65 2e-08
ref|XP_008344352.1| PREDICTED: pentatricopeptide repeat-containi... 65 2e-08
ref|XP_008341222.1| PREDICTED: pentatricopeptide repeat-containi... 65 2e-08
ref|XP_008341213.1| PREDICTED: pentatricopeptide repeat-containi... 65 2e-08
ref|XP_011099383.1| PREDICTED: pentatricopeptide repeat-containi... 64 6e-08
ref|XP_009779649.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-07
ref|XP_009622794.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-07
ref|XP_010679650.1| PREDICTED: pentatricopeptide repeat-containi... 61 3e-07
ref|XP_012854009.1| PREDICTED: pentatricopeptide repeat-containi... 61 4e-07
ref|XP_010316025.1| PREDICTED: pentatricopeptide repeat-containi... 61 4e-07
emb|CDP02608.1| unnamed protein product [Coffea canephora] 59 1e-06
gb|KNA08688.1| hypothetical protein SOVF_160450 [Spinacia oleracea] 58 3e-06
ref|XP_002525278.1| GTP binding protein, putative [Ricinus commu... 58 3e-06
ref|XP_006363825.1| PREDICTED: pentatricopeptide repeat-containi... 58 3e-06
ref|XP_010102755.1| hypothetical protein L484_009383 [Morus nota... 57 4e-06
ref|XP_010647458.1| PREDICTED: pentatricopeptide repeat-containi... 57 5e-06
ref|XP_010647242.1| PREDICTED: pentatricopeptide repeat-containi... 57 5e-06
emb|CBI33251.3| unnamed protein product [Vitis vinifera] 57 5e-06
>ref|XP_009362585.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic [Pyrus x bretschneideri]
Length = 869
Score = 66.2 bits (160), Expect = 9e-09
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -1
Query: 125 RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
RLS T S RDWK SKMMKQ GLQFTE Q+LKI+GGLG KG
Sbjct: 194 RLSSTEFSARDWKLSKMMKQSGLQFTEGQMLKILGGLGAKG 234
>ref|XP_008237850.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic [Prunus mume]
Length = 874
Score = 65.5 bits (158), Expect = 2e-08
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = -1
Query: 125 RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
RLS T S++DWK SKMMKQ GLQFTE Q+LKI+GGLG KG
Sbjct: 195 RLSATEFSMKDWKLSKMMKQSGLQFTEGQMLKILGGLGAKG 235
>ref|XP_007204940.1| hypothetical protein PRUPE_ppa001240mg [Prunus persica]
gi|462400582|gb|EMJ06139.1| hypothetical protein
PRUPE_ppa001240mg [Prunus persica]
Length = 874
Score = 65.5 bits (158), Expect = 2e-08
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = -1
Query: 125 RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
RLS T S++DWK SKMMKQ GLQFTE Q+LKI+GGLG KG
Sbjct: 195 RLSATEFSMKDWKLSKMMKQSGLQFTEGQMLKILGGLGAKG 235
>ref|XP_008344352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic-like [Malus domestica]
Length = 575
Score = 65.1 bits (157), Expect = 2e-08
Identities = 31/41 (75%), Positives = 32/41 (78%)
Frame = -1
Query: 125 RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
RLS T S RDWK SKMMKQ GLQFTE Q LKI+GGLG KG
Sbjct: 194 RLSSTEFSARDWKLSKMMKQSGLQFTEGQTLKILGGLGAKG 234
>ref|XP_008341222.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic isoform X2 [Malus domestica]
Length = 865
Score = 65.1 bits (157), Expect = 2e-08
Identities = 31/41 (75%), Positives = 32/41 (78%)
Frame = -1
Query: 125 RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
RLS T S RDWK SKMMKQ GLQFTE Q LKI+GGLG KG
Sbjct: 194 RLSSTEFSARDWKLSKMMKQSGLQFTEGQTLKILGGLGAKG 234
>ref|XP_008341213.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic isoform X1 [Malus domestica]
Length = 889
Score = 65.1 bits (157), Expect = 2e-08
Identities = 31/41 (75%), Positives = 32/41 (78%)
Frame = -1
Query: 125 RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
RLS T S RDWK SKMMKQ GLQFTE Q LKI+GGLG KG
Sbjct: 194 RLSSTEFSARDWKLSKMMKQSGLQFTEGQTLKILGGLGAKG 234
>ref|XP_011099383.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic [Sesamum indicum]
Length = 868
Score = 63.5 bits (153), Expect = 6e-08
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = -1
Query: 125 RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
RLS T LSV+DWKF++ MK GLQFTE Q++KIV GLGDKG
Sbjct: 183 RLSATELSVKDWKFTRTMKYSGLQFTERQMMKIVEGLGDKG 223
>ref|XP_009779649.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic [Nicotiana sylvestris]
Length = 876
Score = 62.0 bits (149), Expect = 2e-07
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = -1
Query: 125 RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
RLSGT L V+D+KFSK+MK GLQFTE Q+L++V GLG+KG
Sbjct: 188 RLSGTELGVKDYKFSKLMKHSGLQFTEEQMLRLVEGLGEKG 228
>ref|XP_009622794.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic [Nicotiana tomentosiformis]
Length = 875
Score = 62.0 bits (149), Expect = 2e-07
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = -1
Query: 125 RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
RLSGT L V+D+KFSK+MK GLQFTE Q+L++V GLG+KG
Sbjct: 188 RLSGTELGVKDYKFSKLMKHSGLQFTEEQMLRLVEGLGEKG 228
>ref|XP_010679650.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic [Beta vulgaris subsp. vulgaris]
gi|870858333|gb|KMT09851.1| hypothetical protein
BVRB_6g128250 [Beta vulgaris subsp. vulgaris]
Length = 842
Score = 61.2 bits (147), Expect = 3e-07
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = -1
Query: 125 RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
RLS ++++DWKF++MMKQ LQFTE QLLKI+GGLGD+G
Sbjct: 197 RLSAREITMKDWKFTRMMKQSQLQFTEDQLLKILGGLGDQG 237
>ref|XP_012854009.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic [Erythranthe guttatus]
Length = 785
Score = 60.8 bits (146), Expect = 4e-07
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = -1
Query: 125 RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
RLS T LS +DWKF++MM+ GLQFTE Q++KIV GLG KG
Sbjct: 184 RLSATELSAKDWKFTRMMRYSGLQFTEGQMMKIVNGLGYKG 224
>ref|XP_010316025.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic [Solanum lycopersicum]
Length = 871
Score = 60.8 bits (146), Expect = 4e-07
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = -1
Query: 125 RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
RLSGT L V+D+KFSK+MK GLQ+TE Q+L++V GLG+KG
Sbjct: 188 RLSGTGLGVKDYKFSKLMKHSGLQYTEEQMLRLVQGLGEKG 228
>emb|CDP02608.1| unnamed protein product [Coffea canephora]
Length = 741
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = -1
Query: 125 RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
RL+G+ V+DWKFSK+MK GLQFTE Q+LK+V GLG++G
Sbjct: 49 RLNGSEPRVKDWKFSKIMKLSGLQFTEKQMLKVVEGLGERG 89
>gb|KNA08688.1| hypothetical protein SOVF_160450 [Spinacia oleracea]
Length = 837
Score = 57.8 bits (138), Expect = 3e-06
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = -1
Query: 155 KVELFSNIE*RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
+VE + RLS ++++DWKF++MMKQ LQFTE QLLK++G LGD+G
Sbjct: 174 EVEAIRILVNRLSAREITMKDWKFTRMMKQSQLQFTEDQLLKLLGRLGDQG 224
>ref|XP_002525278.1| GTP binding protein, putative [Ricinus communis]
gi|223535436|gb|EEF37106.1| GTP binding protein,
putative [Ricinus communis]
Length = 1010
Score = 57.8 bits (138), Expect = 3e-06
Identities = 26/41 (63%), Positives = 35/41 (85%)
Frame = -1
Query: 125 RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
RLS +++VRDWK +K+MKQ GL+F+E QL+KIV GLG+KG
Sbjct: 321 RLSKRDVTVRDWKLAKIMKQSGLRFSEGQLMKIVEGLGNKG 361
>ref|XP_006363825.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic-like [Solanum tuberosum]
Length = 864
Score = 57.8 bits (138), Expect = 3e-06
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = -1
Query: 125 RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
RLS T L V+D+KFSK+MK GLQ+TE Q+L++V GLG+KG
Sbjct: 188 RLSETELGVKDYKFSKLMKHSGLQYTEEQMLRLVQGLGEKG 228
>ref|XP_010102755.1| hypothetical protein L484_009383 [Morus notabilis]
gi|587905928|gb|EXB94039.1| hypothetical protein
L484_009383 [Morus notabilis]
Length = 910
Score = 57.4 bits (137), Expect = 4e-06
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = -1
Query: 155 KVELFSNIE*RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
+VE+ + RL GT L RDWK ++MKQ GL+FTE Q+L+IV GLG KG
Sbjct: 172 EVEVIRFLVDRLCGTKLGRRDWKLRRIMKQSGLEFTEGQVLRIVEGLGAKG 222
>ref|XP_010647458.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 57.0 bits (136), Expect = 5e-06
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = -1
Query: 125 RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
RL+ ++++RDWKFS++MKQ GLQFTE QLL+IV LG +G
Sbjct: 169 RLTAADITIRDWKFSRVMKQSGLQFTERQLLRIVEELGARG 209
>ref|XP_010647242.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic-like [Vitis vinifera]
Length = 420
Score = 57.0 bits (136), Expect = 5e-06
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = -1
Query: 125 RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
RL+ ++++RDWKFS++MKQ GLQFTE QLL+IV LG +G
Sbjct: 169 RLTAADITIRDWKFSRVMKQSGLQFTERQLLRIVEELGARG 209
>emb|CBI33251.3| unnamed protein product [Vitis vinifera]
Length = 462
Score = 57.0 bits (136), Expect = 5e-06
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = -1
Query: 125 RLSGTNLSVRDWKFSKMMKQCGLQFTEAQLLKIVGGLGDKG 3
RL+ ++++RDWKFS++MKQ GLQFTE QLL+IV LG +G
Sbjct: 169 RLTAADITIRDWKFSRVMKQSGLQFTERQLLRIVEELGARG 209