BLASTX nr result
ID: Cornus23_contig00006155
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00006155
(371 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008244007.1| PREDICTED: U2 small nuclear ribonucleoprotei... 116 7e-24
ref|XP_007206844.1| hypothetical protein PRUPE_ppa027064mg [Prun... 116 7e-24
ref|XP_014520868.1| PREDICTED: uncharacterized protein LOC106777... 115 2e-23
ref|XP_014520867.1| PREDICTED: uncharacterized protein LOC106777... 115 2e-23
ref|XP_010652787.1| PREDICTED: U1 small nuclear ribonucleoprotei... 115 2e-23
emb|CBI21383.3| unnamed protein product [Vitis vinifera] 115 2e-23
ref|XP_002283118.1| PREDICTED: U1 small nuclear ribonucleoprotei... 115 2e-23
ref|XP_011463901.1| PREDICTED: U1 small nuclear ribonucleoprotei... 114 3e-23
ref|XP_011463897.1| PREDICTED: U1 small nuclear ribonucleoprotei... 114 3e-23
ref|XP_011463896.1| PREDICTED: U1 small nuclear ribonucleoprotei... 114 3e-23
ref|XP_009367401.1| PREDICTED: U1 small nuclear ribonucleoprotei... 114 3e-23
ref|XP_009367393.1| PREDICTED: U1 small nuclear ribonucleoprotei... 114 3e-23
ref|XP_009367383.1| PREDICTED: U1 small nuclear ribonucleoprotei... 114 3e-23
ref|XP_004288011.1| PREDICTED: U1 small nuclear ribonucleoprotei... 114 3e-23
ref|XP_009599930.1| PREDICTED: U2 small nuclear ribonucleoprotei... 114 4e-23
ref|XP_009599929.1| PREDICTED: U2 small nuclear ribonucleoprotei... 114 4e-23
gb|KDO79111.1| hypothetical protein CISIN_1g0206322mg, partial [... 113 5e-23
gb|KDO35809.1| hypothetical protein CISIN_1g032280mg [Citrus sin... 113 5e-23
ref|XP_006494470.1| PREDICTED: U1 small nuclear ribonucleoprotei... 113 5e-23
ref|XP_007156776.1| hypothetical protein PHAVU_002G016600g [Phas... 113 5e-23
>ref|XP_008244007.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Prunus mume]
Length = 328
Score = 116 bits (290), Expect = 7e-24
Identities = 55/67 (82%), Positives = 61/67 (91%)
Frame = -2
Query: 202 AYYPQSSYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSATSTSQPFAFAVFMD 23
A PQ S+++VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLR+ T SQPFAFAVF+D
Sbjct: 61 ALVPQPSHDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRTPTEKSQPFAFAVFLD 120
Query: 22 QQSAVGA 2
QQSA+GA
Sbjct: 121 QQSAIGA 127
>ref|XP_007206844.1| hypothetical protein PRUPE_ppa027064mg [Prunus persica]
gi|462402486|gb|EMJ08043.1| hypothetical protein
PRUPE_ppa027064mg [Prunus persica]
Length = 328
Score = 116 bits (290), Expect = 7e-24
Identities = 55/67 (82%), Positives = 61/67 (91%)
Frame = -2
Query: 202 AYYPQSSYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSATSTSQPFAFAVFMD 23
A PQ S+++VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLR+ T SQPFAFAVF+D
Sbjct: 61 ALVPQPSHDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRTPTEKSQPFAFAVFLD 120
Query: 22 QQSAVGA 2
QQSA+GA
Sbjct: 121 QQSAIGA 127
>ref|XP_014520868.1| PREDICTED: uncharacterized protein LOC106777684 isoform X2 [Vigna
radiata var. radiata]
Length = 333
Score = 115 bits (287), Expect = 2e-23
Identities = 58/73 (79%), Positives = 62/73 (84%), Gaps = 2/73 (2%)
Frame = -2
Query: 214 HQQLAYY--PQSSYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSATSTSQPFA 41
HQQ Y PQ S N+VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRS T++SQPFA
Sbjct: 59 HQQFGSYGAPQPSSNEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSPTNSSQPFA 118
Query: 40 FAVFMDQQSAVGA 2
FAVF QQSA+ A
Sbjct: 119 FAVFASQQSAIMA 131
>ref|XP_014520867.1| PREDICTED: uncharacterized protein LOC106777684 isoform X1 [Vigna
radiata var. radiata]
Length = 334
Score = 115 bits (287), Expect = 2e-23
Identities = 58/73 (79%), Positives = 62/73 (84%), Gaps = 2/73 (2%)
Frame = -2
Query: 214 HQQLAYY--PQSSYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSATSTSQPFA 41
HQQ Y PQ S N+VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRS T++SQPFA
Sbjct: 59 HQQFGSYGAPQPSSNEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSPTNSSQPFA 118
Query: 40 FAVFMDQQSAVGA 2
FAVF QQSA+ A
Sbjct: 119 FAVFASQQSAIMA 131
>ref|XP_010652787.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform X1 [Vitis
vinifera]
Length = 337
Score = 115 bits (287), Expect = 2e-23
Identities = 53/65 (81%), Positives = 60/65 (92%)
Frame = -2
Query: 196 YPQSSYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSATSTSQPFAFAVFMDQQ 17
YPQ+S ++VRTLF+AGLPEDVKPREIYNLFREFPGYESSHLRS + SQPFAFAVF+DQQ
Sbjct: 72 YPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQNSQPFAFAVFLDQQ 131
Query: 16 SAVGA 2
SA+ A
Sbjct: 132 SAIAA 136
>emb|CBI21383.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 115 bits (287), Expect = 2e-23
Identities = 53/65 (81%), Positives = 60/65 (92%)
Frame = -2
Query: 196 YPQSSYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSATSTSQPFAFAVFMDQQ 17
YPQ+S ++VRTLF+AGLPEDVKPREIYNLFREFPGYESSHLRS + SQPFAFAVF+DQQ
Sbjct: 69 YPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQNSQPFAFAVFLDQQ 128
Query: 16 SAVGA 2
SA+ A
Sbjct: 129 SAIAA 133
>ref|XP_002283118.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform X2 [Vitis
vinifera]
Length = 336
Score = 115 bits (287), Expect = 2e-23
Identities = 53/65 (81%), Positives = 60/65 (92%)
Frame = -2
Query: 196 YPQSSYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSATSTSQPFAFAVFMDQQ 17
YPQ+S ++VRTLF+AGLPEDVKPREIYNLFREFPGYESSHLRS + SQPFAFAVF+DQQ
Sbjct: 72 YPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQNSQPFAFAVFLDQQ 131
Query: 16 SAVGA 2
SA+ A
Sbjct: 132 SAIAA 136
>ref|XP_011463901.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform X3
[Fragaria vesca subsp. vesca]
Length = 328
Score = 114 bits (285), Expect = 3e-23
Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 7/81 (8%)
Frame = -2
Query: 223 YHPHQQLAYYP-------QSSYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSA 65
Y+P Q Y P QS+Y++VRTLFVAGLPEDVK REIYNLFREFPGYESSHLR+
Sbjct: 46 YYPPQPPPYAPYAAPLVAQSAYDEVRTLFVAGLPEDVKAREIYNLFREFPGYESSHLRTP 105
Query: 64 TSTSQPFAFAVFMDQQSAVGA 2
T +QPFAFAVF+DQQSA+GA
Sbjct: 106 TEKTQPFAFAVFLDQQSAIGA 126
>ref|XP_011463897.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform X2
[Fragaria vesca subsp. vesca]
Length = 329
Score = 114 bits (285), Expect = 3e-23
Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 7/81 (8%)
Frame = -2
Query: 223 YHPHQQLAYYP-------QSSYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSA 65
Y+P Q Y P QS+Y++VRTLFVAGLPEDVK REIYNLFREFPGYESSHLR+
Sbjct: 46 YYPPQPPPYAPYAAPLVAQSAYDEVRTLFVAGLPEDVKAREIYNLFREFPGYESSHLRTP 105
Query: 64 TSTSQPFAFAVFMDQQSAVGA 2
T +QPFAFAVF+DQQSA+GA
Sbjct: 106 TEKTQPFAFAVFLDQQSAIGA 126
>ref|XP_011463896.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform X1
[Fragaria vesca subsp. vesca]
Length = 330
Score = 114 bits (285), Expect = 3e-23
Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 7/81 (8%)
Frame = -2
Query: 223 YHPHQQLAYYP-------QSSYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSA 65
Y+P Q Y P QS+Y++VRTLFVAGLPEDVK REIYNLFREFPGYESSHLR+
Sbjct: 46 YYPPQPPPYAPYAAPLVAQSAYDEVRTLFVAGLPEDVKAREIYNLFREFPGYESSHLRTP 105
Query: 64 TSTSQPFAFAVFMDQQSAVGA 2
T +QPFAFAVF+DQQSA+GA
Sbjct: 106 TEKTQPFAFAVFLDQQSAIGA 126
>ref|XP_009367401.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X3
[Pyrus x bretschneideri]
Length = 323
Score = 114 bits (285), Expect = 3e-23
Identities = 53/64 (82%), Positives = 59/64 (92%)
Frame = -2
Query: 193 PQSSYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSATSTSQPFAFAVFMDQQS 14
PQ SY+++RTLFVAGLPEDVKPREIYNLFREFPGYESSHLR+ SQPFAFAVF+DQQS
Sbjct: 64 PQPSYDELRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRTPNGKSQPFAFAVFLDQQS 123
Query: 13 AVGA 2
A+GA
Sbjct: 124 AIGA 127
>ref|XP_009367393.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X2
[Pyrus x bretschneideri]
Length = 328
Score = 114 bits (285), Expect = 3e-23
Identities = 53/64 (82%), Positives = 59/64 (92%)
Frame = -2
Query: 193 PQSSYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSATSTSQPFAFAVFMDQQS 14
PQ SY+++RTLFVAGLPEDVKPREIYNLFREFPGYESSHLR+ SQPFAFAVF+DQQS
Sbjct: 64 PQPSYDELRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRTPNGKSQPFAFAVFLDQQS 123
Query: 13 AVGA 2
A+GA
Sbjct: 124 AIGA 127
>ref|XP_009367383.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X1
[Pyrus x bretschneideri]
Length = 329
Score = 114 bits (285), Expect = 3e-23
Identities = 53/64 (82%), Positives = 59/64 (92%)
Frame = -2
Query: 193 PQSSYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSATSTSQPFAFAVFMDQQS 14
PQ SY+++RTLFVAGLPEDVKPREIYNLFREFPGYESSHLR+ SQPFAFAVF+DQQS
Sbjct: 64 PQPSYDELRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRTPNGKSQPFAFAVFLDQQS 123
Query: 13 AVGA 2
A+GA
Sbjct: 124 AIGA 127
>ref|XP_004288011.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform X4
[Fragaria vesca subsp. vesca]
Length = 327
Score = 114 bits (285), Expect = 3e-23
Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 7/81 (8%)
Frame = -2
Query: 223 YHPHQQLAYYP-------QSSYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSA 65
Y+P Q Y P QS+Y++VRTLFVAGLPEDVK REIYNLFREFPGYESSHLR+
Sbjct: 46 YYPPQPPPYAPYAAPLVAQSAYDEVRTLFVAGLPEDVKAREIYNLFREFPGYESSHLRTP 105
Query: 64 TSTSQPFAFAVFMDQQSAVGA 2
T +QPFAFAVF+DQQSA+GA
Sbjct: 106 TEKTQPFAFAVFLDQQSAIGA 126
>ref|XP_009599930.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform X2
[Nicotiana tomentosiformis]
Length = 319
Score = 114 bits (284), Expect = 4e-23
Identities = 60/82 (73%), Positives = 64/82 (78%), Gaps = 8/82 (9%)
Frame = -2
Query: 223 YHPHQQ-------LAYYPQSSYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRS- 68
+HPHQ YPQ SY+DVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRS
Sbjct: 47 HHPHQPPIPTYAPSPIYPQHSYDDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSQ 106
Query: 67 ATSTSQPFAFAVFMDQQSAVGA 2
+S SQPFAFAVF DQ SA+ A
Sbjct: 107 ISSNSQPFAFAVFTDQNSALMA 128
>ref|XP_009599929.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform X1
[Nicotiana tomentosiformis]
Length = 320
Score = 114 bits (284), Expect = 4e-23
Identities = 60/82 (73%), Positives = 64/82 (78%), Gaps = 8/82 (9%)
Frame = -2
Query: 223 YHPHQQ-------LAYYPQSSYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRS- 68
+HPHQ YPQ SY+DVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRS
Sbjct: 47 HHPHQPPIPTYAPSPIYPQHSYDDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSQ 106
Query: 67 ATSTSQPFAFAVFMDQQSAVGA 2
+S SQPFAFAVF DQ SA+ A
Sbjct: 107 ISSNSQPFAFAVFTDQNSALMA 128
>gb|KDO79111.1| hypothetical protein CISIN_1g0206322mg, partial [Citrus sinensis]
gi|641860423|gb|KDO79112.1| hypothetical protein
CISIN_1g0206322mg, partial [Citrus sinensis]
Length = 129
Score = 113 bits (283), Expect = 5e-23
Identities = 54/61 (88%), Positives = 58/61 (95%)
Frame = -2
Query: 184 SYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSATSTSQPFAFAVFMDQQSAVG 5
SY++VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRS+T SQPFAFAVF DQQSA+G
Sbjct: 64 SYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALG 123
Query: 4 A 2
A
Sbjct: 124 A 124
>gb|KDO35809.1| hypothetical protein CISIN_1g032280mg [Citrus sinensis]
Length = 144
Score = 113 bits (283), Expect = 5e-23
Identities = 54/61 (88%), Positives = 58/61 (95%)
Frame = -2
Query: 184 SYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSATSTSQPFAFAVFMDQQSAVG 5
SY++VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRS+T SQPFAFAVF DQQSA+G
Sbjct: 60 SYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALG 119
Query: 4 A 2
A
Sbjct: 120 A 120
>ref|XP_006494470.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Citrus
sinensis]
Length = 326
Score = 113 bits (283), Expect = 5e-23
Identities = 54/61 (88%), Positives = 58/61 (95%)
Frame = -2
Query: 184 SYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSATSTSQPFAFAVFMDQQSAVG 5
SY++VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRS+T SQPFAFAVF DQQSA+G
Sbjct: 64 SYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALG 123
Query: 4 A 2
A
Sbjct: 124 A 124
>ref|XP_007156776.1| hypothetical protein PHAVU_002G016600g [Phaseolus vulgaris]
gi|561030191|gb|ESW28770.1| hypothetical protein
PHAVU_002G016600g [Phaseolus vulgaris]
Length = 337
Score = 113 bits (283), Expect = 5e-23
Identities = 58/76 (76%), Positives = 63/76 (82%), Gaps = 5/76 (6%)
Frame = -2
Query: 214 HQQLAYY-----PQSSYNDVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSATSTSQ 50
HQQ A + PQ S N+VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRS T++SQ
Sbjct: 59 HQQQAVFGSYGSPQPSTNEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSPTNSSQ 118
Query: 49 PFAFAVFMDQQSAVGA 2
PFAFAVF QQSA+ A
Sbjct: 119 PFAFAVFASQQSAIMA 134