BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00005857
         (3292 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010664484.1| PREDICTED: pre-mRNA-processing protein 40A [...  1063   0.0  
ref|XP_010273523.1| PREDICTED: pre-mRNA-processing protein 40A [...  1015   0.0  
ref|XP_007018436.1| Pre-mRNA-processing protein 40A isoform 1 [T...   984   0.0  
ref|XP_007018440.1| Pre-mRNA-processing protein 40A isoform 5 [T...   978   0.0  
ref|XP_007018438.1| Pre-mRNA-processing protein 40A isoform 3 [T...   978   0.0  
ref|XP_010248344.1| PREDICTED: pre-mRNA-processing protein 40A-l...   971   0.0  
ref|XP_010248342.1| PREDICTED: pre-mRNA-processing protein 40A-l...   971   0.0  
ref|XP_012450388.1| PREDICTED: pre-mRNA-processing protein 40A i...   967   0.0  
ref|XP_007227030.1| hypothetical protein PRUPE_ppa000697mg [Prun...   954   0.0  
ref|XP_008220401.1| PREDICTED: pre-mRNA-processing protein 40A i...   953   0.0  
ref|XP_008220399.1| PREDICTED: pre-mRNA-processing protein 40A i...   953   0.0  
ref|XP_009606230.1| PREDICTED: pre-mRNA-processing protein 40A i...   936   0.0  
ref|XP_009765764.1| PREDICTED: pre-mRNA-processing protein 40A i...   920   0.0  
ref|XP_009606232.1| PREDICTED: pre-mRNA-processing protein 40A i...   919   0.0  
ref|XP_009606231.1| PREDICTED: pre-mRNA-processing protein 40A i...   919   0.0  
ref|XP_007018439.1| Pre-mRNA-processing protein 40A isoform 4 [T...   912   0.0  
ref|XP_009361094.1| PREDICTED: pre-mRNA-processing protein 40A [...   909   0.0  
ref|XP_009606233.1| PREDICTED: pre-mRNA-processing protein 40A i...   907   0.0  
ref|XP_009765765.1| PREDICTED: pre-mRNA-processing protein 40A i...   902   0.0  
ref|XP_008365587.1| PREDICTED: pre-mRNA-processing protein 40A-l...   902   0.0  

>ref|XP_010664484.1| PREDICTED: pre-mRNA-processing protein 40A [Vitis vinifera]
            gi|302142164|emb|CBI19367.3| unnamed protein product
            [Vitis vinifera]
          Length = 1030

 Score = 1063 bits (2748), Expect = 0.0
 Identities = 570/881 (64%), Positives = 632/881 (71%), Gaps = 8/881 (0%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVGPQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPVG 2926
            MANN QSSGAQP RPPA+GS+GPQ+FGPP  MQFRP VP QQG PFIPA  ASQQFRP+G
Sbjct: 1    MANNPQSSGAQPLRPPAVGSMGPQNFGPPLSMQFRPAVPGQQGHPFIPA--ASQQFRPIG 58

Query: 2925 QGIPSPNVGMPSSQGQPLQYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGSP 2746
            Q I SPNVG PS Q QP Q+SQ MQQLPPRP QP     SSQ IPM YIQ N PL S SP
Sbjct: 59   QNISSPNVGGPSGQNQPPQFSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTSSSP 118

Query: 2745 QTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAPV 2566
            Q  QTAP LN+HMPGL GPG PFSSSYTFAP+SFGQP S  N S+Q+QP+SQMHAPV   
Sbjct: 119  QPNQTAPPLNSHMPGLAGPGMPFSSSYTFAPASFGQPQSTINASAQFQPISQMHAPV--- 175

Query: 2565 GGQHWLPTGSHGAPLVTSVQETGQQPSVTA---GANVPNATQQSSSDWQEHMS-DGRRYY 2398
            GGQ WL +GS    LVT V + GQQPSVTA     NVPN T QSSSDWQEH S DGRRYY
Sbjct: 176  GGQPWLSSGSQSGALVTPVHQAGQQPSVTADIPAGNVPNPTHQSSSDWQEHTSADGRRYY 235

Query: 2397 YNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDLKLA 2218
            YNKKT+ SSWEKPLELMTPIERADASTVWKEF+T +GRKYYYNK+TKQSKWTIPE+LKLA
Sbjct: 236  YNKKTRLSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLA 295

Query: 2217 REQAEKSATQGTESEINMTPNAQASDMVSSVEQPSAAVIRMXXXXXXXXXXXXSXXXXXX 2038
            REQAEKS +Q T+SE+  T N  A   VS  E PS A + +            S      
Sbjct: 296  REQAEKSVSQETQSEMGTTSNEPAVVAVSLAETPSTASVSVSSTTSSTISGMTSSPVPVT 355

Query: 2037 XXXXXXXXXXV--SGSSDIPVVHSAAT-SAVGVN-SLGITVDXXXXXXXXXXXXXXALVG 1870
                      V  SG+S IP+  SA T SAVGV  S+G  +                 + 
Sbjct: 356  PVVAVVNPPPVVVSGTSAIPIAQSAVTTSAVGVQPSMGTPLPAAVSGSTGVAAA---FIN 412

Query: 1869 TNTATMSSFENLSSHDAANSLDGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLVYA 1690
             N  +M+SFENLS+ DA N   GASMQDIEEAKKG+AVAGK+NVTPLEEKT+DDEPLVY+
Sbjct: 413  PNATSMTSFENLSA-DATN---GASMQDIEEAKKGVAVAGKINVTPLEEKTLDDEPLVYS 468

Query: 1689 TKQEAKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXXXX 1510
            TK EAKNAFKALLESANVESDWTW+Q M+ II DKRY ALKTLGERKQAFNEYLG     
Sbjct: 469  TKLEAKNAFKALLESANVESDWTWDQAMKAIINDKRYGALKTLGERKQAFNEYLGQRKKI 528

Query: 1509 XXXXXXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLFRT 1330
                          EFT M           +WSKA+ MF+DDERF AVERS +REDLF  
Sbjct: 529  EAEERRMRQKKAREEFTTMLEECKELTSSIKWSKAVDMFQDDERFKAVERSRDREDLFEN 588

Query: 1329 YLVDLXXXXXXXXXXXQRRNRLEYRQFLETCSFIKVNSQWRKVQDRLEDDERCSRLDKFD 1150
            ++++L           Q+RNR+EYRQFLE+C FIKVNSQWRKVQDRLEDDERCSRL+K D
Sbjct: 589  FIMELQKKERTKALEEQKRNRMEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKID 648

Query: 1149 RLEIFTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAKTHWRDY 970
            RLEIF EYIRD                 RAERKNRDEFRK+MEEH+AAGTLTAKTHWRDY
Sbjct: 649  RLEIFQEYIRDLEREEEEQRKIQKEQLRRAERKNRDEFRKLMEEHVAAGTLTAKTHWRDY 708

Query: 969  FMKVKDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKIIITSTWT 790
             MKVKDS PY  V+SNTSGSTPKDLF+DV EELEKQYHEDK RIKDA+KL K+ I STWT
Sbjct: 709  CMKVKDSSPYLAVASNTSGSTPKDLFEDVAEELEKQYHEDKARIKDAMKLSKVTIASTWT 768

Query: 789  MDDFKDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDLLSTFKE 610
              DFK AILDD+GSP ISD+NLKLVFE+L+               RL  DF DLL + KE
Sbjct: 769  FGDFKAAILDDVGSPNISDVNLKLVFEELLDRIKEKEEKEAKKRQRLADDFNDLLRSKKE 828

Query: 609  ITASSDWEECKQLFEESSEFRSIGEESFRREIFEEYIAHLQ 487
            ITASS+WE+CK LFEES E+RSIGEESF REIFEEYIAHLQ
Sbjct: 829  ITASSNWEDCKPLFEESQEYRSIGEESFGREIFEEYIAHLQ 869


>ref|XP_010273523.1| PREDICTED: pre-mRNA-processing protein 40A [Nelumbo nucifera]
            gi|719971228|ref|XP_010273530.1| PREDICTED:
            pre-mRNA-processing protein 40A [Nelumbo nucifera]
          Length = 1046

 Score = 1015 bits (2625), Expect = 0.0
 Identities = 547/882 (62%), Positives = 611/882 (69%), Gaps = 9/882 (1%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVGPQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPVG 2926
            MANN QSSG QP RPP +GS GPQ++GPP  MQFRPVVP QQ QPFIPA  ASQQFRPV 
Sbjct: 1    MANNPQSSGTQPLRPPVVGSAGPQNYGPPMSMQFRPVVPMQQPQPFIPA--ASQQFRPVS 58

Query: 2925 QGIPSPNVGMPSSQGQPLQYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGSP 2746
            QGI   NVG P +QGQ LQ+SQP QQLPPRPGQP     SSQAIPM Y QPN  ++S S 
Sbjct: 59   QGISVSNVGTPPAQGQQLQFSQPTQQLPPRPGQPGSGPPSSQAIPMPYPQPNRSILSVSS 118

Query: 2745 QTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAPV 2566
            Q QQ A      M G+GG G P SSSYTF  SS+GQP S  N S+QYQP SQ+HAPV P 
Sbjct: 119  QPQQNA----QPMSGIGGMGMPLSSSYTFTISSYGQPQSNINTSTQYQPASQIHAPVVPA 174

Query: 2565 GGQHWLPTGSHGAPLVTSVQETGQQPSVTAGANVPNAT------QQSSSDWQEHMS-DGR 2407
             GQ WL +GS   PLVT VQ+  QQPS+T  A VP  T      QQSSSDWQEH S DGR
Sbjct: 175  AGQPWLSSGSQSVPLVTPVQQNIQQPSITT-AQVPVTTAQPSPAQQSSSDWQEHTSADGR 233

Query: 2406 RYYYNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDL 2227
            RYYYNKKT+QSSWEKP+ELMTPIERADASTVWKEF+T +GRKYYYNK TKQSKWT+P++L
Sbjct: 234  RYYYNKKTRQSSWEKPVELMTPIERADASTVWKEFTTPEGRKYYYNKATKQSKWTMPDEL 293

Query: 2226 KLAREQAEKSATQGTESEINMTPNAQASDMVSSVEQPSAAVIRM-XXXXXXXXXXXXSXX 2050
            KLAREQAEK+A+QG +SE  M     ++  VSSVE PSAA   +                
Sbjct: 294  KLAREQAEKAASQGIQSETTMASQTASTVTVSSVETPSAAANPLGATSAVTSIVASSPVP 353

Query: 2049 XXXXXXXXXXXXXXVSGSSDIPVVHSA-ATSAVGVNSLGITVDXXXXXXXXXXXXXXALV 1873
                           SGS  +PVV  A  TSAVGVNS    +               A  
Sbjct: 354  VTPVVAAINPLPVVSSGSQAVPVVPGAVTTSAVGVNSPAAAIATVPVSVPGGAGVPVAFA 413

Query: 1872 GTNTATMSSFENLSSHDAANSLDGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLVY 1693
              N    +S EN+S+ D A S+DGAS QD+EEAKKGMAVAGK+N+TP+EEKTIDDEPLVY
Sbjct: 414  SANNTATNSAENVSTQDVAASVDGASAQDLEEAKKGMAVAGKINITPVEEKTIDDEPLVY 473

Query: 1692 ATKQEAKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXXX 1513
            A K EAKNAFKALLESANVESDWTWEQ MRVII DKRY ALKTLGERKQAFNEYLG    
Sbjct: 474  ANKLEAKNAFKALLESANVESDWTWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKK 533

Query: 1512 XXXXXXXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLFR 1333
                           EFTKM          TRWSKAI+MFEDDERF AVER  +REDLF 
Sbjct: 534  LEAEERRMKQKRAREEFTKMLEESKELTSSTRWSKAISMFEDDERFKAVERPRDREDLFE 593

Query: 1332 TYLVDLXXXXXXXXXXXQRRNRLEYRQFLETCSFIKVNSQWRKVQDRLEDDERCSRLDKF 1153
             YLV+L            +RN +EYRQFLE+C FIK NSQWRKVQDRLEDDERCSRL+K 
Sbjct: 594  NYLVELQKKERAKAQEEHKRNIMEYRQFLESCDFIKANSQWRKVQDRLEDDERCSRLEKI 653

Query: 1152 DRLEIFTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAKTHWRD 973
            DRLEIF EYIRD                 RAERKNRDEFRK+MEEH+ AGTLTAKTHWRD
Sbjct: 654  DRLEIFQEYIRDLEKEEEEQRKIQKEQLRRAERKNRDEFRKLMEEHVTAGTLTAKTHWRD 713

Query: 972  YFMKVKDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKIIITSTW 793
            Y MKVKD   Y  VSSNTSGSTPKDLF+DV EELEKQYH+DKTRIKDA+KLGKI + STW
Sbjct: 714  YCMKVKDLPAYVAVSSNTSGSTPKDLFEDVSEELEKQYHDDKTRIKDAIKLGKISMASTW 773

Query: 792  TMDDFKDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDLLSTFK 613
            T++DFK AI + +GSP ISDIN KLVF++L+               RL  DF++LL + K
Sbjct: 774  TIEDFKAAIAEHVGSPSISDINFKLVFDELLERIKEKEEKEAKKRQRLADDFSELLHSIK 833

Query: 612  EITASSDWEECKQLFEESSEFRSIGEESFRREIFEEYIAHLQ 487
            EITASS WEE K LFE+S E+RSI +E+FRREIFEEYI HLQ
Sbjct: 834  EITASSKWEESKPLFEDSQEYRSISDENFRREIFEEYIIHLQ 875


>ref|XP_007018436.1| Pre-mRNA-processing protein 40A isoform 1 [Theobroma cacao]
            gi|590596803|ref|XP_007018437.1| Pre-mRNA-processing
            protein 40A isoform 1 [Theobroma cacao]
            gi|508723764|gb|EOY15661.1| Pre-mRNA-processing protein
            40A isoform 1 [Theobroma cacao]
            gi|508723765|gb|EOY15662.1| Pre-mRNA-processing protein
            40A isoform 1 [Theobroma cacao]
          Length = 1032

 Score =  984 bits (2544), Expect = 0.0
 Identities = 521/878 (59%), Positives = 608/878 (69%), Gaps = 5/878 (0%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVGPQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPVG 2926
            MANN+Q S AQP  PPA+GS+GPQS+G P   QFRPVVP QQGQ F+PA  ASQQFRPVG
Sbjct: 1    MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPA--ASQQFRPVG 58

Query: 2925 QGIPSPNVGMPSSQGQPLQYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGSP 2746
            Q +PS NVGMP+ Q Q +Q+SQPMQQ PPRP QP L+  S+Q + + + Q N PL SGSP
Sbjct: 59   Q-VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSP 117

Query: 2745 QTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAPV 2566
            Q+ QTAP LN+HMPGLG PG P SSSY++ PSSFGQP +  + SSQ+QP SQ+HA VAPV
Sbjct: 118  QSHQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPV 177

Query: 2565 GGQHWLPTGSHGAPLVTSVQETGQQP----SVTAGANVPNATQQSSSDWQEHMS-DGRRY 2401
             GQ WL +G+    L   +Q+TGQQP    S    AN P  T  S+SDWQEH S DGRRY
Sbjct: 178  AGQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGRRY 237

Query: 2400 YYNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDLKL 2221
            YYNKKT+QSSWEKPLELMTPIERADASTVWKEF+T +GRKYYYNK+TKQSKWTIPE+LKL
Sbjct: 238  YYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKL 297

Query: 2220 AREQAEKSATQGTESEINMTPNAQASDMVSSVEQPSAAVIRMXXXXXXXXXXXXSXXXXX 2041
            AREQA+  A+QG  S+  +   A  +  VSS E P+AA+                     
Sbjct: 298  AREQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAI----PVSSNTSQASSPVSVTP 353

Query: 2040 XXXXXXXXXXXVSGSSDIPVVHSAATSAVGVNSLGITVDXXXXXXXXXXXXXXALVGTNT 1861
                       VSGS+ +PV  SAAT+A  V S  + V                 V  NT
Sbjct: 354  VAAVANPSPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANT 413

Query: 1860 ATMSSFENLSSHDAANSLDGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLVYATKQ 1681
              + S E+ +S D+ +  +GAS QDIEEAKKGMA AGKVNVTP+EEK  DDEPLVYA KQ
Sbjct: 414  TMIRSLESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQ 473

Query: 1680 EAKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXXXXXXX 1501
            EAKNAFK+LLESANV+SDWTWEQTMR II DKRY ALKTLGERKQAFNEYLG        
Sbjct: 474  EAKNAFKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAE 533

Query: 1500 XXXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLFRTYLV 1321
                       EFTKM           RWSKA ++FE+DERF AVER+ +REDLF  Y+V
Sbjct: 534  ERRMRQKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIV 593

Query: 1320 DLXXXXXXXXXXXQRRNRLEYRQFLETCSFIKVNSQWRKVQDRLEDDERCSRLDKFDRLE 1141
            +L           +RRN  EYR+FLE+C FIK NSQWRKVQDRLEDDERCSRL+K DRL 
Sbjct: 594  ELERKERENAAEEKRRNIAEYRKFLESCDFIKANSQWRKVQDRLEDDERCSRLEKIDRLV 653

Query: 1140 IFTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAKTHWRDYFMK 961
            +F +YI D                 RAERKNRD FRK+M+EH+  GTLTAKT+WRDY +K
Sbjct: 654  MFQDYIHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHVVDGTLTAKTYWRDYCLK 713

Query: 960  VKDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKIIITSTWTMDD 781
            VKD  PY  V+SNTSGSTPKDLF+DVVEELEKQY +DKT IKDA+K GKI + STWT++D
Sbjct: 714  VKDLPPYLAVASNTSGSTPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKISMVSTWTVED 773

Query: 780  FKDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDLLSTFKEITA 601
            FK AI +D+GS PISDINLKLV+E+L+               RL  DFT LL T+KEITA
Sbjct: 774  FKAAISEDVGSLPISDINLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKLLHTYKEITA 833

Query: 600  SSDWEECKQLFEESSEFRSIGEESFRREIFEEYIAHLQ 487
            SSDWE+ + LFEES E+RSI EES RREIFEEYIA+LQ
Sbjct: 834  SSDWEDSRPLFEESQEYRSIAEESLRREIFEEYIAYLQ 871


>ref|XP_007018440.1| Pre-mRNA-processing protein 40A isoform 5 [Theobroma cacao]
            gi|508723768|gb|EOY15665.1| Pre-mRNA-processing protein
            40A isoform 5 [Theobroma cacao]
          Length = 904

 Score =  978 bits (2528), Expect = 0.0
 Identities = 522/887 (58%), Positives = 609/887 (68%), Gaps = 14/887 (1%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVGPQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPVG 2926
            MANN+Q S AQP  PPA+GS+GPQS+G P   QFRPVVP QQGQ F+PA  ASQQFRPVG
Sbjct: 1    MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPA--ASQQFRPVG 58

Query: 2925 QGIPSPNVGMPSSQGQPLQYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGSP 2746
            Q +PS NVGMP+ Q Q +Q+SQPMQQ PPRP QP L+  S+Q + + + Q N PL SGSP
Sbjct: 59   Q-VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSP 117

Query: 2745 QTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAPV 2566
            Q+ QTAP LN+HMPGLG PG P SSSY++ PSSFGQP +  + SSQ+QP SQ+HA VAPV
Sbjct: 118  QSHQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPV 177

Query: 2565 GGQHWLPTGSHGAPLVTSVQETGQQP----SVTAGANVPNATQQSSSDWQEHMS-DGRRY 2401
             GQ WL +G+    L   +Q+TGQQP    S    AN P  T  S+SDWQEH S DGRRY
Sbjct: 178  AGQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGRRY 237

Query: 2400 YYNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDLKL 2221
            YYNKKT+QSSWEKPLELMTPIERADASTVWKEF+T +GRKYYYNK+TKQSKWTIPE+LKL
Sbjct: 238  YYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKL 297

Query: 2220 AREQAEKSATQGTESEINMTPNAQASDMVSSVEQPSAAVIRMXXXXXXXXXXXXSXXXXX 2041
            AREQA+  A+QG  S+  +   A  +  VSS E P+AA+                     
Sbjct: 298  AREQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAI----PVSSNTSQASSPVSVTP 353

Query: 2040 XXXXXXXXXXXVSGSSDIPVVHSAATSAVGVNSLGITVDXXXXXXXXXXXXXXALVGTNT 1861
                       VSGS+ +PV  SAAT+A  V S  + V                 V  NT
Sbjct: 354  VAAVANPSPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANT 413

Query: 1860 ATMSSFENLSSHDAANSLDGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLVYATKQ 1681
              + S E+ +S D+ +  +GAS QDIEEAKKGMA AGKVNVTP+EEK  DDEPLVYA KQ
Sbjct: 414  TMIRSLESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQ 473

Query: 1680 EAKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXXXXXXX 1501
            EAKNAFK+LLESANV+SDWTWEQTMR II DKRY ALKTLGERKQAFNEYLG        
Sbjct: 474  EAKNAFKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAE 533

Query: 1500 XXXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLFRTYLV 1321
                       EFTKM           RWSKA ++FE+DERF AVER+ +REDLF  Y+V
Sbjct: 534  ERRMRQKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIV 593

Query: 1320 DLXXXXXXXXXXXQRRNRLEYRQFLETCSFIKV---------NSQWRKVQDRLEDDERCS 1168
            +L           +RRN  EYR+FLE+C FIKV         NSQWRKVQDRLEDDERCS
Sbjct: 594  ELERKERENAAEEKRRNIAEYRKFLESCDFIKVQHFQKRIQANSQWRKVQDRLEDDERCS 653

Query: 1167 RLDKFDRLEIFTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAK 988
            RL+K DRL +F +YI D                 RAERKNRD FRK+M+EH+  GTLTAK
Sbjct: 654  RLEKIDRLVMFQDYIHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHVVDGTLTAK 713

Query: 987  THWRDYFMKVKDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKII 808
            T+WRDY +KVKD  PY  V+SNTSGSTPKDLF+DVVEELEKQY +DKT IKDA+K GKI 
Sbjct: 714  TYWRDYCLKVKDLPPYLAVASNTSGSTPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKIS 773

Query: 807  ITSTWTMDDFKDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDL 628
            + STWT++DFK AI +D+GS PISDINLKLV+E+L+               RL  DFT L
Sbjct: 774  MVSTWTVEDFKAAISEDVGSLPISDINLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKL 833

Query: 627  LSTFKEITASSDWEECKQLFEESSEFRSIGEESFRREIFEEYIAHLQ 487
            L T+KEITASSDWE+ + LFEES E+RSI EES RREIFEEYIA+LQ
Sbjct: 834  LHTYKEITASSDWEDSRPLFEESQEYRSIAEESLRREIFEEYIAYLQ 880


>ref|XP_007018438.1| Pre-mRNA-processing protein 40A isoform 3 [Theobroma cacao]
            gi|508723766|gb|EOY15663.1| Pre-mRNA-processing protein
            40A isoform 3 [Theobroma cacao]
          Length = 1041

 Score =  978 bits (2528), Expect = 0.0
 Identities = 522/887 (58%), Positives = 609/887 (68%), Gaps = 14/887 (1%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVGPQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPVG 2926
            MANN+Q S AQP  PPA+GS+GPQS+G P   QFRPVVP QQGQ F+PA  ASQQFRPVG
Sbjct: 1    MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPA--ASQQFRPVG 58

Query: 2925 QGIPSPNVGMPSSQGQPLQYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGSP 2746
            Q +PS NVGMP+ Q Q +Q+SQPMQQ PPRP QP L+  S+Q + + + Q N PL SGSP
Sbjct: 59   Q-VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSP 117

Query: 2745 QTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAPV 2566
            Q+ QTAP LN+HMPGLG PG P SSSY++ PSSFGQP +  + SSQ+QP SQ+HA VAPV
Sbjct: 118  QSHQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPV 177

Query: 2565 GGQHWLPTGSHGAPLVTSVQETGQQP----SVTAGANVPNATQQSSSDWQEHMS-DGRRY 2401
             GQ WL +G+    L   +Q+TGQQP    S    AN P  T  S+SDWQEH S DGRRY
Sbjct: 178  AGQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGRRY 237

Query: 2400 YYNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDLKL 2221
            YYNKKT+QSSWEKPLELMTPIERADASTVWKEF+T +GRKYYYNK+TKQSKWTIPE+LKL
Sbjct: 238  YYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKL 297

Query: 2220 AREQAEKSATQGTESEINMTPNAQASDMVSSVEQPSAAVIRMXXXXXXXXXXXXSXXXXX 2041
            AREQA+  A+QG  S+  +   A  +  VSS E P+AA+                     
Sbjct: 298  AREQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAI----PVSSNTSQASSPVSVTP 353

Query: 2040 XXXXXXXXXXXVSGSSDIPVVHSAATSAVGVNSLGITVDXXXXXXXXXXXXXXALVGTNT 1861
                       VSGS+ +PV  SAAT+A  V S  + V                 V  NT
Sbjct: 354  VAAVANPSPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANT 413

Query: 1860 ATMSSFENLSSHDAANSLDGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLVYATKQ 1681
              + S E+ +S D+ +  +GAS QDIEEAKKGMA AGKVNVTP+EEK  DDEPLVYA KQ
Sbjct: 414  TMIRSLESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQ 473

Query: 1680 EAKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXXXXXXX 1501
            EAKNAFK+LLESANV+SDWTWEQTMR II DKRY ALKTLGERKQAFNEYLG        
Sbjct: 474  EAKNAFKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAE 533

Query: 1500 XXXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLFRTYLV 1321
                       EFTKM           RWSKA ++FE+DERF AVER+ +REDLF  Y+V
Sbjct: 534  ERRMRQKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIV 593

Query: 1320 DLXXXXXXXXXXXQRRNRLEYRQFLETCSFIKV---------NSQWRKVQDRLEDDERCS 1168
            +L           +RRN  EYR+FLE+C FIKV         NSQWRKVQDRLEDDERCS
Sbjct: 594  ELERKERENAAEEKRRNIAEYRKFLESCDFIKVQHFQKRIQANSQWRKVQDRLEDDERCS 653

Query: 1167 RLDKFDRLEIFTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAK 988
            RL+K DRL +F +YI D                 RAERKNRD FRK+M+EH+  GTLTAK
Sbjct: 654  RLEKIDRLVMFQDYIHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHVVDGTLTAK 713

Query: 987  THWRDYFMKVKDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKII 808
            T+WRDY +KVKD  PY  V+SNTSGSTPKDLF+DVVEELEKQY +DKT IKDA+K GKI 
Sbjct: 714  TYWRDYCLKVKDLPPYLAVASNTSGSTPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKIS 773

Query: 807  ITSTWTMDDFKDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDL 628
            + STWT++DFK AI +D+GS PISDINLKLV+E+L+               RL  DFT L
Sbjct: 774  MVSTWTVEDFKAAISEDVGSLPISDINLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKL 833

Query: 627  LSTFKEITASSDWEECKQLFEESSEFRSIGEESFRREIFEEYIAHLQ 487
            L T+KEITASSDWE+ + LFEES E+RSI EES RREIFEEYIA+LQ
Sbjct: 834  LHTYKEITASSDWEDSRPLFEESQEYRSIAEESLRREIFEEYIAYLQ 880


>ref|XP_010248344.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Nelumbo
            nucifera]
          Length = 1033

 Score =  971 bits (2510), Expect = 0.0
 Identities = 522/883 (59%), Positives = 598/883 (67%), Gaps = 10/883 (1%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVG-PQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPV 2929
            MA+N QSS AQP  PP +GS G PQ+FGPP  MQFRPVVP QQ QPFIPA  ASQQF P+
Sbjct: 1    MASNPQSSAAQPLCPPIVGSAGLPQNFGPPISMQFRPVVPVQQPQPFIPA--ASQQFYPI 58

Query: 2928 GQGIPSPNVGMPSSQGQPLQYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGS 2749
            GQGI   N G+ S+Q Q LQ+ QP QQLPPRPGQP     SSQAIP+ Y Q N P++SGS
Sbjct: 59   GQGISGSNAGISSAQNQQLQFFQPTQQLPPRPGQPGHGPPSSQAIPISYSQSNRPILSGS 118

Query: 2748 PQTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAP 2569
             Q QQ A  ++    G+GG G P SSSYTF P S+GQP +  N  + YQP+SQMHA V P
Sbjct: 119  SQPQQNAQPISG--TGIGGTGIPLSSSYTFTPLSYGQPQNNINTFTHYQPVSQMHAHVVP 176

Query: 2568 VGGQHWLPTGSHGAPLVTSVQETGQQPSVTAG-----ANVPNATQQSSSDWQEHMS-DGR 2407
              GQ WLP GS   PLVT VQ+T QQPSVTA      A  P+ TQQSSSDWQEH S DGR
Sbjct: 177  AAGQPWLPPGSQSTPLVTPVQQTVQQPSVTAPTVPATAVQPSPTQQSSSDWQEHTSPDGR 236

Query: 2406 RYYYNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDL 2227
            RYYYNKKT+QSSWEKPLELMTPIERADASTVWKEF+T +GRKYYY+K+TKQSKWT+PE+L
Sbjct: 237  RYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYSKVTKQSKWTMPEEL 296

Query: 2226 KLAREQAEKSATQGTESEINMTPNAQASDMVSSVEQPSAAV--IRMXXXXXXXXXXXXSX 2053
            KL+REQAEK+A+Q  + E  M  +   S  VSSVE  S +   +                
Sbjct: 297  KLSREQAEKAASQSIQPETIMASHTSVSVTVSSVEPQSVSANSVSSTPSALIPSLASSPV 356

Query: 2052 XXXXXXXXXXXXXXXVSGSSDIPVVHSAAT-SAVGVNSLGITVDXXXXXXXXXXXXXXAL 1876
                            SGS  +P V  AAT SA GV+S    VD               L
Sbjct: 357  PVTPVVAAVNPLSMVASGSQTVPAVLGAATTSAAGVHSTAAAVDAT-------------L 403

Query: 1875 VGTNTATMSSFENLSSHDAANSLDGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLV 1696
            V T T T ++ E +   D   S+DG S QD+EEAKKGMAVAG++N+   EEKTIDDEPLV
Sbjct: 404  VNTTTTTTTNIEIVPHQDVTTSVDGVSAQDLEEAKKGMAVAGQINIATAEEKTIDDEPLV 463

Query: 1695 YATKQEAKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXX 1516
            YA K EAK+AFKALLESANVESDWTWEQ MRVII DKRY ALKTLGERKQAFNEYLG   
Sbjct: 464  YANKLEAKSAFKALLESANVESDWTWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRK 523

Query: 1515 XXXXXXXXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLF 1336
                            EFTKM          TRWSKAI+MFEDDERF AVER  +REDLF
Sbjct: 524  KQEAEERRMRQKKARKEFTKMLEESKELTSSTRWSKAISMFEDDERFKAVERPRDREDLF 583

Query: 1335 RTYLVDLXXXXXXXXXXXQRRNRLEYRQFLETCSFIKVNSQWRKVQDRLEDDERCSRLDK 1156
              YLV+L            ++N +EY+QFLE+C FIK NSQWRKVQDRLEDDERCSRL+K
Sbjct: 584  ENYLVELQKKERAKAQEEHKQNIMEYKQFLESCDFIKANSQWRKVQDRLEDDERCSRLEK 643

Query: 1155 FDRLEIFTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAKTHWR 976
             DRLEIF EY+RD                  AERKNR+EFRK++EEH+AAGTL AK HWR
Sbjct: 644  IDRLEIFQEYVRDLEKEEEEQKKIHKEQLRWAERKNREEFRKLLEEHVAAGTLIAKIHWR 703

Query: 975  DYFMKVKDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKIIITST 796
            DY MKVKD   Y  V+SN+SGSTPKDLF+DV EELEKQY EDKTRIKDA+KLGKI + ST
Sbjct: 704  DYCMKVKDLPAYLAVASNSSGSTPKDLFEDVAEELEKQYREDKTRIKDAMKLGKINMAST 763

Query: 795  WTMDDFKDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDLLSTF 616
            WT+DDFK AI DD+GSPPISD+NLKL+F +L+                L  DF++LL + 
Sbjct: 764  WTLDDFKSAIADDVGSPPISDVNLKLIFAELLERIKEKEEKEAKKRQCLADDFSELLYSI 823

Query: 615  KEITASSDWEECKQLFEESSEFRSIGEESFRREIFEEYIAHLQ 487
            K ITASS W++ K LFE+S E+RSI E SFRREIFEEYI HLQ
Sbjct: 824  KGITASSKWKDSKSLFEDSQEYRSILEGSFRREIFEEYIMHLQ 866


>ref|XP_010248342.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Nelumbo
            nucifera]
          Length = 1034

 Score =  971 bits (2510), Expect = 0.0
 Identities = 522/883 (59%), Positives = 598/883 (67%), Gaps = 10/883 (1%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVG-PQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPV 2929
            MA+N QSS AQP  PP +GS G PQ+FGPP  MQFRPVVP QQ QPFIPA  ASQQF P+
Sbjct: 1    MASNPQSSAAQPLCPPIVGSAGLPQNFGPPISMQFRPVVPVQQPQPFIPA--ASQQFYPI 58

Query: 2928 GQGIPSPNVGMPSSQGQPLQYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGS 2749
            GQGI   N G+ S+Q Q LQ+ QP QQLPPRPGQP     SSQAIP+ Y Q N P++SGS
Sbjct: 59   GQGISGSNAGISSAQNQQLQFFQPTQQLPPRPGQPGHGPPSSQAIPISYSQSNRPILSGS 118

Query: 2748 PQTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAP 2569
             Q QQ A  ++    G+GG G P SSSYTF P S+GQP +  N  + YQP+SQMHA V P
Sbjct: 119  SQPQQNAQPISG--TGIGGTGIPLSSSYTFTPLSYGQPQNNINTFTHYQPVSQMHAHVVP 176

Query: 2568 VGGQHWLPTGSHGAPLVTSVQETGQQPSVTAG-----ANVPNATQQSSSDWQEHMS-DGR 2407
              GQ WLP GS   PLVT VQ+T QQPSVTA      A  P+ TQQSSSDWQEH S DGR
Sbjct: 177  AAGQPWLPPGSQSTPLVTPVQQTVQQPSVTAPTVPATAVQPSPTQQSSSDWQEHTSPDGR 236

Query: 2406 RYYYNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDL 2227
            RYYYNKKT+QSSWEKPLELMTPIERADASTVWKEF+T +GRKYYY+K+TKQSKWT+PE+L
Sbjct: 237  RYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYSKVTKQSKWTMPEEL 296

Query: 2226 KLAREQAEKSATQGTESEINMTPNAQASDMVSSVEQPSAAV--IRMXXXXXXXXXXXXSX 2053
            KL+REQAEK+A+Q  + E  M  +   S  VSSVE  S +   +                
Sbjct: 297  KLSREQAEKAASQSIQPETIMASHTSVSVTVSSVEPQSVSANSVSSTPSALIPSLASSPV 356

Query: 2052 XXXXXXXXXXXXXXXVSGSSDIPVVHSAAT-SAVGVNSLGITVDXXXXXXXXXXXXXXAL 1876
                            SGS  +P V  AAT SA GV+S    VD               L
Sbjct: 357  PVTPVVAAVNPLSMVASGSQTVPAVLGAATTSAAGVHSTAAAVDAT-------------L 403

Query: 1875 VGTNTATMSSFENLSSHDAANSLDGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLV 1696
            V T T T ++ E +   D   S+DG S QD+EEAKKGMAVAG++N+   EEKTIDDEPLV
Sbjct: 404  VNTTTTTTTNIEIVPHQDVTTSVDGVSAQDLEEAKKGMAVAGQINIATAEEKTIDDEPLV 463

Query: 1695 YATKQEAKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXX 1516
            YA K EAK+AFKALLESANVESDWTWEQ MRVII DKRY ALKTLGERKQAFNEYLG   
Sbjct: 464  YANKLEAKSAFKALLESANVESDWTWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRK 523

Query: 1515 XXXXXXXXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLF 1336
                            EFTKM          TRWSKAI+MFEDDERF AVER  +REDLF
Sbjct: 524  KQEAEERRMRQKKARKEFTKMLEESKELTSSTRWSKAISMFEDDERFKAVERPRDREDLF 583

Query: 1335 RTYLVDLXXXXXXXXXXXQRRNRLEYRQFLETCSFIKVNSQWRKVQDRLEDDERCSRLDK 1156
              YLV+L            ++N +EY+QFLE+C FIK NSQWRKVQDRLEDDERCSRL+K
Sbjct: 584  ENYLVELQKKERAKAQEEHKQNIMEYKQFLESCDFIKANSQWRKVQDRLEDDERCSRLEK 643

Query: 1155 FDRLEIFTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAKTHWR 976
             DRLEIF EY+RD                  AERKNR+EFRK++EEH+AAGTL AK HWR
Sbjct: 644  IDRLEIFQEYVRDLEKEEEEQKKIHKEQLRWAERKNREEFRKLLEEHVAAGTLIAKIHWR 703

Query: 975  DYFMKVKDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKIIITST 796
            DY MKVKD   Y  V+SN+SGSTPKDLF+DV EELEKQY EDKTRIKDA+KLGKI + ST
Sbjct: 704  DYCMKVKDLPAYLAVASNSSGSTPKDLFEDVAEELEKQYREDKTRIKDAMKLGKINMAST 763

Query: 795  WTMDDFKDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDLLSTF 616
            WT+DDFK AI DD+GSPPISD+NLKL+F +L+                L  DF++LL + 
Sbjct: 764  WTLDDFKSAIADDVGSPPISDVNLKLIFAELLERIKEKEEKEAKKRQCLADDFSELLYSI 823

Query: 615  KEITASSDWEECKQLFEESSEFRSIGEESFRREIFEEYIAHLQ 487
            K ITASS W++ K LFE+S E+RSI E SFRREIFEEYI HLQ
Sbjct: 824  KGITASSKWKDSKSLFEDSQEYRSILEGSFRREIFEEYIMHLQ 866


>ref|XP_012450388.1| PREDICTED: pre-mRNA-processing protein 40A isoform X1 [Gossypium
            raimondii] gi|763797014|gb|KJB63969.1| hypothetical
            protein B456_010G027200 [Gossypium raimondii]
          Length = 1026

 Score =  967 bits (2499), Expect = 0.0
 Identities = 516/877 (58%), Positives = 599/877 (68%), Gaps = 4/877 (0%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVGPQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPVG 2926
            MANN+Q S AQP  PPA+GS+GPQS+G P   QFRPVVP QQGQ F+PA  ASQQFRPVG
Sbjct: 1    MANNSQPSSAQPHWPPAVGSMGPQSYGSPLSSQFRPVVPTQQGQHFVPA--ASQQFRPVG 58

Query: 2925 QGIPSPNVGMPSSQGQPLQYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGSP 2746
            Q +PSPN+GMP+ Q Q +Q+SQPMQQ PPRP QP L+T S Q I +QY Q N PL S  P
Sbjct: 59   Q-VPSPNIGMPAVQNQQMQFSQPMQQFPPRPNQPGLSTPSQQPIQVQYGQTNRPLTSEPP 117

Query: 2745 QTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAPV 2566
            Q+ Q+AP LN+HMPG+G PG P  SSY FAPSSFG P +  +  SQ+ P+SQ+HAPVAPV
Sbjct: 118  QSHQSAPPLNSHMPGVGVPGVP-PSSYGFAPSSFGLPQNNVSAPSQFHPISQVHAPVAPV 176

Query: 2565 GGQHWLPTGSHGAPLVTSVQETGQQP---SVTAGANVPNATQQSSSDWQEHMS-DGRRYY 2398
             GQ WL TG+    L T  Q T QQP   S    ANVP+ T QSS DWQEH S DGRRYY
Sbjct: 177  AGQPWLSTGNQNVSLATPTQHTSQQPPPSSADTNANVPSLTPQSS-DWQEHTSADGRRYY 235

Query: 2397 YNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDLKLA 2218
            YNK+T+QSSWEKPLELMTPIERADASTVWKEF+T +GRKYY+NK+TK+SKWTIPE+LKLA
Sbjct: 236  YNKRTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYHNKVTKESKWTIPEELKLA 295

Query: 2217 REQAEKSATQGTESEINMTPNAQASDMVSSVEQPSAAVIRMXXXXXXXXXXXXSXXXXXX 2038
            REQA+ +++QGT S   + P A  +  VS+ E P+ A+                      
Sbjct: 296  REQAQAASSQGTPSGSGVAPQAPVATAVSAAETPTTAI-------PVSSNTLQDSSPVSV 348

Query: 2037 XXXXXXXXXXVSGSSDIPVVHSAATSAVGVNSLGITVDXXXXXXXXXXXXXXALVGTNTA 1858
                      VSG +  PV  SAA SA GV    ++V                 VG  TA
Sbjct: 349  TPVANPSPTSVSGPTTGPVAQSAAMSATGVQLPVVSVTPVPAVPSRGSTVSAPSVGATTA 408

Query: 1857 TMSSFENLSSHDAANSLDGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLVYATKQE 1678
               S E  ++ D  +  DGAS QDIEEAKKGMA AGKVN+TP+EEK  DDEPLVYA K E
Sbjct: 409  VTRSSETTATQDTMHFADGASAQDIEEAKKGMATAGKVNMTPVEEKVPDDEPLVYANKLE 468

Query: 1677 AKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXXXXXXXX 1498
            AKNAFK+LLESANV+SDWTWEQTMR II DKRY ALKTLGERKQAFNEYLG         
Sbjct: 469  AKNAFKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEE 528

Query: 1497 XXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLFRTYLVD 1318
                      EFTKM           RWSKA ++FE+DERF AVER+ +REDLF  Y+VD
Sbjct: 529  RRMRQKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVD 588

Query: 1317 LXXXXXXXXXXXQRRNRLEYRQFLETCSFIKVNSQWRKVQDRLEDDERCSRLDKFDRLEI 1138
            L           +RRN  EYR+FLE+C FIK NSQWRKVQDRLEDDERCSRL+K DRL I
Sbjct: 589  LERKEREYAAEEKRRNIAEYRKFLESCDFIKANSQWRKVQDRLEDDERCSRLEKIDRLLI 648

Query: 1137 FTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAKTHWRDYFMKV 958
            F +YI D                 RAERKNRD FRK+MEEH+A GTLTAKT+WRDY +KV
Sbjct: 649  FQDYIHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMEEHVADGTLTAKTYWRDYCLKV 708

Query: 957  KDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKIIITSTWTMDDF 778
            K+   Y  V+SNTSGSTPKDLF+DV EEL+KQYHE KTRIK+A+K GK+ +  +WT +DF
Sbjct: 709  KELPQYLAVASNTSGSTPKDLFEDVAEELDKQYHEHKTRIKEAMKTGKVTMVYSWTFEDF 768

Query: 777  KDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDLLSTFKEITAS 598
            K AI +D+GS  ISDINLKLV+++L+               RL  DFT LL T+KEITAS
Sbjct: 769  KAAISEDVGSSSISDINLKLVYDELLERAKEKEEKEAKKRQRLADDFTRLLHTYKEITAS 828

Query: 597  SDWEECKQLFEESSEFRSIGEESFRREIFEEYIAHLQ 487
            SDWEE K LFEES E+RSI EESFRREIFEEYI HLQ
Sbjct: 829  SDWEESKPLFEESQEYRSIAEESFRREIFEEYITHLQ 865


>ref|XP_007227030.1| hypothetical protein PRUPE_ppa000697mg [Prunus persica]
            gi|462423966|gb|EMJ28229.1| hypothetical protein
            PRUPE_ppa000697mg [Prunus persica]
          Length = 1031

 Score =  954 bits (2465), Expect = 0.0
 Identities = 508/879 (57%), Positives = 613/879 (69%), Gaps = 6/879 (0%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVGPQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPVG 2926
            MANN QSS AQP RPP + S+GPQSFG    +Q+RPVVP QQGQ FI +  ASQQF+PVG
Sbjct: 1    MANNPQSSAAQPFRPPPVASLGPQSFGSSPSLQYRPVVPTQQGQQFIQS--ASQQFQPVG 58

Query: 2925 QGIPSPNVGMPSSQGQPLQYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGSP 2746
            QGIPS NVGMP+SQ Q LQ+SQPMQ  P RP QP  AT SSQA+PMQY+Q   P+ S   
Sbjct: 59   QGIPSSNVGMPASQSQQLQFSQPMQPYPLRPSQPGHATPSSQALPMQYMQTR-PITSAPS 117

Query: 2745 QTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAPV 2566
            Q+QQ A   NN MPGL G G P+SSSY FAP S+ QP +  + SSQ+QP+SQ+ A V+ V
Sbjct: 118  QSQQPALPFNNQMPGLAGGGMPYSSSYIFAPPSYAQPQNNVSSSSQFQPISQVQAHVS-V 176

Query: 2565 GGQHWLPTGSHGAPLVTSVQETGQQPSVT----AGANVPNATQQSSSDWQEHMS-DGRRY 2401
             GQ W+ +G+ GA + T V ++GQQPS T    +  NVP+ TQQSSSDWQEH S DGRRY
Sbjct: 177  TGQPWVSSGNQGAAVPTPVPQSGQQPSSTTFTDSAVNVPSQTQQSSSDWQEHTSGDGRRY 236

Query: 2400 YYNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDLKL 2221
            Y+N++TKQSSWEKPLELMTP+ERADASTVWKE++++DG+KYYYNK+T++SKWTIPE+LKL
Sbjct: 237  YFNRRTKQSSWEKPLELMTPMERADASTVWKEYTSSDGKKYYYNKVTRESKWTIPEELKL 296

Query: 2220 AREQAEKSATQGTESEINMTPNAQASDMVSSVEQP-SAAVIRMXXXXXXXXXXXXSXXXX 2044
            AREQA++   QGT SE+N+T +A  +  V+S E P  ++ +                   
Sbjct: 297  AREQAQRELAQGTRSEMNLTSHAPPA--VASAETPMGSSSVGPSTSSALPGMVSSPVAVI 354

Query: 2043 XXXXXXXXXXXXVSGSSDIPVVHSAATSAVGVNSLGITVDXXXXXXXXXXXXXXALVGTN 1864
                         +GSS      S+ T  VG+    +TV                LV   
Sbjct: 355  PVSSFSNPSPIAPTGSSVASGAQSSITGGVGIQPPVVTVTPPPASVSGSTGVPPTLVNAI 414

Query: 1863 TATMSSFENLSSHDAANSLDGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLVYATK 1684
            T ++S+FEN++S D  ++ DGA  QDIEEAK+GMAVAGKVNVTP EEKT+D+EPLVYA+K
Sbjct: 415  TKSVSTFENVTSQDIGSADDGAFTQDIEEAKRGMAVAGKVNVTPSEEKTVDEEPLVYASK 474

Query: 1683 QEAKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXXXXXX 1504
            QEAKNAFKALLESANV SDWTWEQTMR II DKRY ALKTLGERKQAFNEYLG       
Sbjct: 475  QEAKNAFKALLESANVHSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEN 534

Query: 1503 XXXXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLFRTYL 1324
                        EF+KM          TRWSKA++MFE+DERF AVER+ +REDL+ +Y+
Sbjct: 535  EERRMRQKKAREEFSKMLEESKELMSATRWSKAVSMFENDERFKAVERARDREDLYESYI 594

Query: 1323 VDLXXXXXXXXXXXQRRNRLEYRQFLETCSFIKVNSQWRKVQDRLEDDERCSRLDKFDRL 1144
            V+L            ++N  EYR+FLE+C FIKVNSQWRKVQDRLEDDERC RL+K DRL
Sbjct: 595  VELERKEKEKAAEDHKQNIAEYRKFLESCDFIKVNSQWRKVQDRLEDDERCLRLEKLDRL 654

Query: 1143 EIFTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAKTHWRDYFM 964
             IF +YIRD                 R ERKNRDEFRK+MEEH+A GTLTAKT+WRDY M
Sbjct: 655  LIFQDYIRDLEKEEEEQKKIQKEQLRRVERKNRDEFRKLMEEHVADGTLTAKTYWRDYCM 714

Query: 963  KVKDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKIIITSTWTMD 784
            KVKD   Y+ V+SNTSGSTPK+LF+DV EELEKQYHEDK RIKDA+KLGK+ + ST T +
Sbjct: 715  KVKDLSSYEAVASNTSGSTPKELFEDVAEELEKQYHEDKARIKDAMKLGKVTLASTLTFE 774

Query: 783  DFKDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDLLSTFKEIT 604
            +FK AIL+DIG P ISDIN KLV+E+L+               RL  DF  LL TFKEIT
Sbjct: 775  EFKVAILEDIGFPSISDINFKLVYEELLERAKEKEEKEAKKRQRLGDDFNKLLHTFKEIT 834

Query: 603  ASSDWEECKQLFEESSEFRSIGEESFRREIFEEYIAHLQ 487
            ASS+WE+CK LFEE+ E+RSIGEE+F RE+FEEYI +LQ
Sbjct: 835  ASSNWEDCKHLFEETQEYRSIGEENFSREVFEEYITNLQ 873


>ref|XP_008220401.1| PREDICTED: pre-mRNA-processing protein 40A isoform X2 [Prunus mume]
          Length = 988

 Score =  953 bits (2463), Expect = 0.0
 Identities = 507/879 (57%), Positives = 611/879 (69%), Gaps = 6/879 (0%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVGPQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPVG 2926
            MANN QSS AQP RPP + S+GPQSFG    +Q+RPVVP QQGQ FI +  ASQQF+PVG
Sbjct: 1    MANNPQSSAAQPFRPPPVASLGPQSFGSSPSLQYRPVVPTQQGQQFIQS--ASQQFQPVG 58

Query: 2925 QGIPSPNVGMPSSQGQPLQYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGSP 2746
            QGIPS NVGMP+SQ Q LQ+SQPMQ  P RP QP  AT SSQA+PMQY+Q   P+ S   
Sbjct: 59   QGIPSSNVGMPASQSQQLQFSQPMQPYPLRPSQPGHATPSSQAVPMQYMQTR-PITSAPS 117

Query: 2745 QTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAPV 2566
            Q+QQ A   NN MPGL G G P+SSSY FAP S+ QP +  + SSQ+QP+SQ+ A V+ V
Sbjct: 118  QSQQPALPFNNQMPGLAGGGMPYSSSYMFAPPSYAQPQNNVSSSSQFQPISQVQAHVS-V 176

Query: 2565 GGQHWLPTGSHGAPLVTSVQETGQQPSVT----AGANVPNATQQSSSDWQEHMS-DGRRY 2401
             GQ W+ +G+ GA + T V ++GQ PS T    +  NVP+ TQQSSSDWQEH S DGRRY
Sbjct: 177  TGQPWVSSGNQGAAVPTPVPQSGQHPSSTTFTDSAVNVPSQTQQSSSDWQEHTSGDGRRY 236

Query: 2400 YYNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDLKL 2221
            Y+N++TKQSSWEKPLELMTP+ERADASTVWKE++++DG+KYYYNK+T++SKWTIPE+LKL
Sbjct: 237  YFNRRTKQSSWEKPLELMTPMERADASTVWKEYTSSDGKKYYYNKVTRESKWTIPEELKL 296

Query: 2220 AREQAEKSATQGTESEINMTPNAQASDMVSSVEQP-SAAVIRMXXXXXXXXXXXXSXXXX 2044
            AREQA++   QGT SE+N+T +A  +  V+S E P  ++ +                   
Sbjct: 297  AREQAQRELAQGTRSEMNLTSHAPPA--VASAETPMGSSSVGPSTSSALPGMVSSPVAVI 354

Query: 2043 XXXXXXXXXXXXVSGSSDIPVVHSAATSAVGVNSLGITVDXXXXXXXXXXXXXXALVGTN 1864
                         +GSS      S+ T  VG+    +TV                LV T 
Sbjct: 355  PVSSFSNPSPVAPTGSSVASGAQSSITGGVGIQPPVVTVTPLPASVSGSTGVPPTLVSTI 414

Query: 1863 TATMSSFENLSSHDAANSLDGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLVYATK 1684
            T ++S++EN++S D  ++ DGA  QDIEEAK+GMAVAGKVNVTP EEKT+D+EPLVYA K
Sbjct: 415  TKSVSTYENVTSQDIGSADDGAFTQDIEEAKRGMAVAGKVNVTPSEEKTVDEEPLVYANK 474

Query: 1683 QEAKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXXXXXX 1504
            QEAKNAFKALLESANV SDWTWEQTMR II DKRY ALKTLGERKQAFNEYLG       
Sbjct: 475  QEAKNAFKALLESANVHSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEN 534

Query: 1503 XXXXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLFRTYL 1324
                        EF+KM          TRWSKA++MFE+DERF AVER+ +REDL+ +Y+
Sbjct: 535  EERRMRQKKAREEFSKMLEESKELTSATRWSKAVSMFENDERFKAVERARDREDLYESYI 594

Query: 1323 VDLXXXXXXXXXXXQRRNRLEYRQFLETCSFIKVNSQWRKVQDRLEDDERCSRLDKFDRL 1144
            V+L            ++N  EYR+FLE+C FIKVNSQWRKVQDRLEDDERC RL+K DRL
Sbjct: 595  VELERKEKEKAAEEHKQNIAEYRKFLESCDFIKVNSQWRKVQDRLEDDERCLRLEKLDRL 654

Query: 1143 EIFTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAKTHWRDYFM 964
             IF +YIRD                 R ERKNRDEFRK+MEEH+A GTLTAKTHWRDY M
Sbjct: 655  LIFQDYIRDLEKEEEEQKKILKEQLRRVERKNRDEFRKLMEEHVADGTLTAKTHWRDYCM 714

Query: 963  KVKDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKIIITSTWTMD 784
            KVKD   Y+ V+SNTSGSTPK+LF+DV EELEKQYHEDK RIKDA+KLGK+ + ST   +
Sbjct: 715  KVKDLSSYEAVASNTSGSTPKELFEDVAEELEKQYHEDKARIKDAMKLGKVTLASTLAFE 774

Query: 783  DFKDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDLLSTFKEIT 604
            +FK AIL+DIG P ISDIN KLV+E+L+               RL  DF  LL TFKEIT
Sbjct: 775  EFKVAILEDIGFPSISDINFKLVYEELLERAKEKEEKEAKKRQRLGDDFNKLLHTFKEIT 834

Query: 603  ASSDWEECKQLFEESSEFRSIGEESFRREIFEEYIAHLQ 487
            ASS+WE+CK LFEE+ E+RSIGEE+F RE+FEEYI +LQ
Sbjct: 835  ASSNWEDCKHLFEETQEYRSIGEENFSREVFEEYITNLQ 873


>ref|XP_008220399.1| PREDICTED: pre-mRNA-processing protein 40A isoform X1 [Prunus mume]
          Length = 1031

 Score =  953 bits (2463), Expect = 0.0
 Identities = 507/879 (57%), Positives = 611/879 (69%), Gaps = 6/879 (0%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVGPQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPVG 2926
            MANN QSS AQP RPP + S+GPQSFG    +Q+RPVVP QQGQ FI +  ASQQF+PVG
Sbjct: 1    MANNPQSSAAQPFRPPPVASLGPQSFGSSPSLQYRPVVPTQQGQQFIQS--ASQQFQPVG 58

Query: 2925 QGIPSPNVGMPSSQGQPLQYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGSP 2746
            QGIPS NVGMP+SQ Q LQ+SQPMQ  P RP QP  AT SSQA+PMQY+Q   P+ S   
Sbjct: 59   QGIPSSNVGMPASQSQQLQFSQPMQPYPLRPSQPGHATPSSQAVPMQYMQTR-PITSAPS 117

Query: 2745 QTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAPV 2566
            Q+QQ A   NN MPGL G G P+SSSY FAP S+ QP +  + SSQ+QP+SQ+ A V+ V
Sbjct: 118  QSQQPALPFNNQMPGLAGGGMPYSSSYMFAPPSYAQPQNNVSSSSQFQPISQVQAHVS-V 176

Query: 2565 GGQHWLPTGSHGAPLVTSVQETGQQPSVT----AGANVPNATQQSSSDWQEHMS-DGRRY 2401
             GQ W+ +G+ GA + T V ++GQ PS T    +  NVP+ TQQSSSDWQEH S DGRRY
Sbjct: 177  TGQPWVSSGNQGAAVPTPVPQSGQHPSSTTFTDSAVNVPSQTQQSSSDWQEHTSGDGRRY 236

Query: 2400 YYNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDLKL 2221
            Y+N++TKQSSWEKPLELMTP+ERADASTVWKE++++DG+KYYYNK+T++SKWTIPE+LKL
Sbjct: 237  YFNRRTKQSSWEKPLELMTPMERADASTVWKEYTSSDGKKYYYNKVTRESKWTIPEELKL 296

Query: 2220 AREQAEKSATQGTESEINMTPNAQASDMVSSVEQP-SAAVIRMXXXXXXXXXXXXSXXXX 2044
            AREQA++   QGT SE+N+T +A  +  V+S E P  ++ +                   
Sbjct: 297  AREQAQRELAQGTRSEMNLTSHAPPA--VASAETPMGSSSVGPSTSSALPGMVSSPVAVI 354

Query: 2043 XXXXXXXXXXXXVSGSSDIPVVHSAATSAVGVNSLGITVDXXXXXXXXXXXXXXALVGTN 1864
                         +GSS      S+ T  VG+    +TV                LV T 
Sbjct: 355  PVSSFSNPSPVAPTGSSVASGAQSSITGGVGIQPPVVTVTPLPASVSGSTGVPPTLVSTI 414

Query: 1863 TATMSSFENLSSHDAANSLDGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLVYATK 1684
            T ++S++EN++S D  ++ DGA  QDIEEAK+GMAVAGKVNVTP EEKT+D+EPLVYA K
Sbjct: 415  TKSVSTYENVTSQDIGSADDGAFTQDIEEAKRGMAVAGKVNVTPSEEKTVDEEPLVYANK 474

Query: 1683 QEAKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXXXXXX 1504
            QEAKNAFKALLESANV SDWTWEQTMR II DKRY ALKTLGERKQAFNEYLG       
Sbjct: 475  QEAKNAFKALLESANVHSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEN 534

Query: 1503 XXXXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLFRTYL 1324
                        EF+KM          TRWSKA++MFE+DERF AVER+ +REDL+ +Y+
Sbjct: 535  EERRMRQKKAREEFSKMLEESKELTSATRWSKAVSMFENDERFKAVERARDREDLYESYI 594

Query: 1323 VDLXXXXXXXXXXXQRRNRLEYRQFLETCSFIKVNSQWRKVQDRLEDDERCSRLDKFDRL 1144
            V+L            ++N  EYR+FLE+C FIKVNSQWRKVQDRLEDDERC RL+K DRL
Sbjct: 595  VELERKEKEKAAEEHKQNIAEYRKFLESCDFIKVNSQWRKVQDRLEDDERCLRLEKLDRL 654

Query: 1143 EIFTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAKTHWRDYFM 964
             IF +YIRD                 R ERKNRDEFRK+MEEH+A GTLTAKTHWRDY M
Sbjct: 655  LIFQDYIRDLEKEEEEQKKILKEQLRRVERKNRDEFRKLMEEHVADGTLTAKTHWRDYCM 714

Query: 963  KVKDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKIIITSTWTMD 784
            KVKD   Y+ V+SNTSGSTPK+LF+DV EELEKQYHEDK RIKDA+KLGK+ + ST   +
Sbjct: 715  KVKDLSSYEAVASNTSGSTPKELFEDVAEELEKQYHEDKARIKDAMKLGKVTLASTLAFE 774

Query: 783  DFKDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDLLSTFKEIT 604
            +FK AIL+DIG P ISDIN KLV+E+L+               RL  DF  LL TFKEIT
Sbjct: 775  EFKVAILEDIGFPSISDINFKLVYEELLERAKEKEEKEAKKRQRLGDDFNKLLHTFKEIT 834

Query: 603  ASSDWEECKQLFEESSEFRSIGEESFRREIFEEYIAHLQ 487
            ASS+WE+CK LFEE+ E+RSIGEE+F RE+FEEYI +LQ
Sbjct: 835  ASSNWEDCKHLFEETQEYRSIGEENFSREVFEEYITNLQ 873


>ref|XP_009606230.1| PREDICTED: pre-mRNA-processing protein 40A isoform X1 [Nicotiana
            tomentosiformis]
          Length = 1050

 Score =  936 bits (2420), Expect = 0.0
 Identities = 518/879 (58%), Positives = 582/879 (66%), Gaps = 6/879 (0%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVGPQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPVG 2926
            MA+N   SG QP  PP++GS  PQ FG  FPMQFRP V  QQGQPF  +  AS Q+RP+G
Sbjct: 1    MASNPPPSGPQPLWPPSVGSTPPQGFGSSFPMQFRPAVSTQQGQPFASSISASPQYRPIG 60

Query: 2925 QGIPSPNVGMPSSQGQPLQYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGSP 2746
            Q   +PN GMP   GQ  Q+SQPMQQ PPRP QP     SSQAI M +IQ +MP      
Sbjct: 61   Q---TPNAGMPPGHGQIPQFSQPMQQFPPRPSQPGHGILSSQAIQMPFIQSSMP------ 111

Query: 2745 QTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAPV 2566
            Q QQ  P LN+HMPG+ G G PFSSSYTFAP  F Q LS  N+ SQ Q  SQMH P  P 
Sbjct: 112  QPQQVIPPLNSHMPGVSGAGNPFSSSYTFAPPPFAQALSGLNMPSQVQSSSQMHVPPFPS 171

Query: 2565 GGQHWLPTGSHGAP-----LVTSVQETGQQPSVTAGANVPNATQQSSSDWQEH-MSDGRR 2404
            GGQ WL +GS   P     L+TS Q +   PSV AG     A+QQ++SDWQE+  +DGRR
Sbjct: 172  GGQPWLSSGSQTTPVAAPTLLTSQQLSAIAPSVPAGT----ASQQNASDWQEYEAADGRR 227

Query: 2403 YYYNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDLK 2224
            YYYNK TKQSSWEKPLELMT +ERADASTVWKEF+T DGRKYYYNK TKQSKWTIPE+LK
Sbjct: 228  YYYNKITKQSSWEKPLELMTTLERADASTVWKEFTTADGRKYYYNKETKQSKWTIPEELK 287

Query: 2223 LAREQAEKSATQGTESEINMTPNAQASDMVSSVEQPSAAVIRMXXXXXXXXXXXXSXXXX 2044
            LARE AEKSA Q  ++  +     Q +  V+S EQPSA                 S    
Sbjct: 288  LARELAEKSADQVVQTGASTISGVQVTAAVTSTEQPSAVTPVSSTPSSTVSGVASSPVPV 347

Query: 2043 XXXXXXXXXXXXVSGSSDIPVVHSAATSAVGVNSLGITVDXXXXXXXXXXXXXXALVGTN 1864
                        VSGSS IP V  A  S+ GV+S  ++                 L   +
Sbjct: 348  TSAVSDHASPLVVSGSSAIPAVTPAMPSSSGVSSPAVS----------GSTGSATLANAS 397

Query: 1863 TATMSSFENLSSHDAANSLDGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLVYATK 1684
               MS FENLS    A+SL GAS+QDIEEAKKGMAVAGKVNV P EEKT ++EP +YATK
Sbjct: 398  QKQMSGFENLSPQ-VASSLSGASIQDIEEAKKGMAVAGKVNVVPAEEKTTEEEPFLYATK 456

Query: 1683 QEAKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXXXXXX 1504
            QEAKNAFKALLE ANVESDWTWEQTMRVII DKRY ALKTLGERKQAFNEYL        
Sbjct: 457  QEAKNAFKALLEFANVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEA 516

Query: 1503 XXXXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLFRTYL 1324
                        EFTKM          TRWSKA+TMFEDDERF AVER  +REDLFR YL
Sbjct: 517  EERRHRQRKAKEEFTKMLEESKELISSTRWSKAVTMFEDDERFKAVEREADREDLFRNYL 576

Query: 1323 VDLXXXXXXXXXXXQRRNRLEYRQFLETCSFIKVNSQWRKVQDRLEDDERCSRLDKFDRL 1144
            VDL            R NRLEYRQFLETC FIKV++QWRKVQD LEDDERCSRL+K DRL
Sbjct: 577  VDLQKKERAKAQEEYRHNRLEYRQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKIDRL 636

Query: 1143 EIFTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAKTHWRDYFM 964
            +IF EYIRD                 R ERKNRD FRKMMEE IAAGTLTAKT WRDY  
Sbjct: 637  DIFQEYIRDLEKEDEEQRKLQKEQLRRTERKNRDAFRKMMEEQIAAGTLTAKTSWRDYCQ 696

Query: 963  KVKDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKIIITSTWTMD 784
             VK+ V YQ V+SNTSGSTPKDLF+DVVEELEKQYHEDK R+KD VK  KI I+STWT +
Sbjct: 697  MVKEYVAYQAVASNTSGSTPKDLFEDVVEELEKQYHEDKIRVKDVVKSEKITISSTWTFE 756

Query: 783  DFKDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDLLSTFKEIT 604
            DFK AIL+ IGSP I D+NL+L+FED++               RL +DFTD LST KEIT
Sbjct: 757  DFKAAILEGIGSPSIHDVNLQLIFEDIIERAKEKEEKESKKRQRLAKDFTDKLSTIKEIT 816

Query: 603  ASSDWEECKQLFEESSEFRSIGEESFRREIFEEYIAHLQ 487
            ASS WEECK+L E+SSEFR+IGEE+  R +FEEY+A LQ
Sbjct: 817  ASSSWEECKELVEDSSEFRAIGEETISRAVFEEYVAWLQ 855


>ref|XP_009765764.1| PREDICTED: pre-mRNA-processing protein 40A isoform X1 [Nicotiana
            sylvestris]
          Length = 1052

 Score =  920 bits (2377), Expect = 0.0
 Identities = 511/880 (58%), Positives = 576/880 (65%), Gaps = 7/880 (0%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVGPQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPVG 2926
            MA+N   SG QP  PP++GS  PQ FG  FPMQFRP V  QQGQPF  +  AS Q+RPVG
Sbjct: 1    MASNPPPSGPQPLWPPSVGSTPPQGFGSSFPMQFRPAVSTQQGQPFASSISASPQYRPVG 60

Query: 2925 QGIPSPNVGMPSSQGQPL-QYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGS 2749
            Q   + N GMP      + Q+SQPMQQ PPRP QP      SQAI M +IQ +MP     
Sbjct: 61   Q---TSNAGMPPGHHSQIPQFSQPMQQFPPRPNQPGHGILLSQAIQMPFIQSSMP----- 112

Query: 2748 PQTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAP 2569
             Q QQ  P LN+HMPG+ G G PFSSSYTFAP  F   LS  N+ SQ Q  SQMH P  P
Sbjct: 113  -QPQQVIPPLNSHMPGVSGAGNPFSSSYTFAPPPFAHALSGLNMPSQVQSSSQMHVPSFP 171

Query: 2568 VGGQHWLPTGSHGAPLVTSVQETGQQ-----PSVTAGANVPNATQQSSSDWQEH-MSDGR 2407
             GGQ WL +GS   P+      T QQ     PSV AG     A+ Q++SDWQE+  +DGR
Sbjct: 172  SGGQPWLSSGSQNTPVTAPTLLTNQQLSAIAPSVPAGT----ASPQNASDWQEYEAADGR 227

Query: 2406 RYYYNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDL 2227
            RYYYNK TKQSSWEKPLELMTP+ERADASTVWKEF+T DGRKYYYNK TKQSKWTIPE+L
Sbjct: 228  RYYYNKITKQSSWEKPLELMTPLERADASTVWKEFTTADGRKYYYNKETKQSKWTIPEEL 287

Query: 2226 KLAREQAEKSATQGTESEINMTPNAQASDMVSSVEQPSAAVIRMXXXXXXXXXXXXSXXX 2047
            KLARE AEKSA Q  ++  + T   Q +  V+S EQPSA                 S   
Sbjct: 288  KLARELAEKSAGQVVQTGASTTSGVQVTAAVTSTEQPSAVTPVSSTPSSTVSGVASSPVP 347

Query: 2046 XXXXXXXXXXXXXVSGSSDIPVVHSAATSAVGVNSLGITVDXXXXXXXXXXXXXXALVGT 1867
                         VSGSS IP V  A  S+ GV+S  ++                AL   
Sbjct: 348  VTSAVSDHASPLVVSGSSAIPAVTPAMPSSSGVSSPAVS----------GSTGSAALANA 397

Query: 1866 NTATMSSFENLSSHDAANSLDGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLVYAT 1687
            +   MS FENLS    ++SL GAS+QDIEEAKKGMAVAGKVNV P EEKT ++EP +YAT
Sbjct: 398  SQTQMSGFENLSPQ-VSSSLSGASIQDIEEAKKGMAVAGKVNVVPAEEKTTEEEPFLYAT 456

Query: 1686 KQEAKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXXXXX 1507
            KQEAKNAFKALLE ANVESDWTWEQTMRVII DKRY ALKTLGERKQAFNEYL       
Sbjct: 457  KQEAKNAFKALLEFANVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQE 516

Query: 1506 XXXXXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLFRTY 1327
                         EFTKM          TRWSKA+TMFEDDERF AVER  +REDLFR Y
Sbjct: 517  AEERRHRQRKAKEEFTKMLEESKELISSTRWSKAVTMFEDDERFKAVEREADREDLFRNY 576

Query: 1326 LVDLXXXXXXXXXXXQRRNRLEYRQFLETCSFIKVNSQWRKVQDRLEDDERCSRLDKFDR 1147
            LVDL            R+NRLEYR FLETC FIKV++QWRKVQD LEDDERC RL+K DR
Sbjct: 577  LVDLQKKERAKAQEEYRQNRLEYRHFLETCGFIKVDTQWRKVQDLLEDDERCLRLEKIDR 636

Query: 1146 LEIFTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAKTHWRDYF 967
            L+IF EYIRD                 R ERKNRD FRKMMEE I AGTLTAKT WRDY 
Sbjct: 637  LDIFQEYIRDLEKEDEEQRKLQKEQLRRTERKNRDAFRKMMEEQITAGTLTAKTSWRDYC 696

Query: 966  MKVKDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKIIITSTWTM 787
              VK+SV YQ V+SNTSGSTPKDLF+DVVEELEKQYHEDK R+KD VK  KI I+STWT 
Sbjct: 697  QMVKESVAYQAVASNTSGSTPKDLFEDVVEELEKQYHEDKIRVKDVVKSEKITISSTWTF 756

Query: 786  DDFKDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDLLSTFKEI 607
            +DFK  IL+ IGSP I D+NL+L+FEDL+               RL +DFTD LST KEI
Sbjct: 757  EDFKATILEGIGSPSIHDVNLQLIFEDLIERAKEKEEKETKKRQRLAKDFTDKLSTIKEI 816

Query: 606  TASSDWEECKQLFEESSEFRSIGEESFRREIFEEYIAHLQ 487
            TASS WEECK+L E++SEFR+IGEE+  R +FEEY+A LQ
Sbjct: 817  TASSSWEECKELVEDTSEFRAIGEETISRAVFEEYVAWLQ 856


>ref|XP_009606232.1| PREDICTED: pre-mRNA-processing protein 40A isoform X3 [Nicotiana
            tomentosiformis]
          Length = 1042

 Score =  919 bits (2375), Expect = 0.0
 Identities = 513/879 (58%), Positives = 577/879 (65%), Gaps = 6/879 (0%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVGPQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPVG 2926
            MA+N   SG QP  PP++GS  PQ FG  FPMQ        QGQPF  +  AS Q+RP+G
Sbjct: 1    MASNPPPSGPQPLWPPSVGSTPPQGFGSSFPMQ--------QGQPFASSISASPQYRPIG 52

Query: 2925 QGIPSPNVGMPSSQGQPLQYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGSP 2746
            Q   +PN GMP   GQ  Q+SQPMQQ PPRP QP     SSQAI M +IQ +MP      
Sbjct: 53   Q---TPNAGMPPGHGQIPQFSQPMQQFPPRPSQPGHGILSSQAIQMPFIQSSMP------ 103

Query: 2745 QTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAPV 2566
            Q QQ  P LN+HMPG+ G G PFSSSYTFAP  F Q LS  N+ SQ Q  SQMH P  P 
Sbjct: 104  QPQQVIPPLNSHMPGVSGAGNPFSSSYTFAPPPFAQALSGLNMPSQVQSSSQMHVPPFPS 163

Query: 2565 GGQHWLPTGSHGAP-----LVTSVQETGQQPSVTAGANVPNATQQSSSDWQEH-MSDGRR 2404
            GGQ WL +GS   P     L+TS Q +   PSV AG     A+QQ++SDWQE+  +DGRR
Sbjct: 164  GGQPWLSSGSQTTPVAAPTLLTSQQLSAIAPSVPAGT----ASQQNASDWQEYEAADGRR 219

Query: 2403 YYYNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDLK 2224
            YYYNK TKQSSWEKPLELMT +ERADASTVWKEF+T DGRKYYYNK TKQSKWTIPE+LK
Sbjct: 220  YYYNKITKQSSWEKPLELMTTLERADASTVWKEFTTADGRKYYYNKETKQSKWTIPEELK 279

Query: 2223 LAREQAEKSATQGTESEINMTPNAQASDMVSSVEQPSAAVIRMXXXXXXXXXXXXSXXXX 2044
            LARE AEKSA Q  ++  +     Q +  V+S EQPSA                 S    
Sbjct: 280  LARELAEKSADQVVQTGASTISGVQVTAAVTSTEQPSAVTPVSSTPSSTVSGVASSPVPV 339

Query: 2043 XXXXXXXXXXXXVSGSSDIPVVHSAATSAVGVNSLGITVDXXXXXXXXXXXXXXALVGTN 1864
                        VSGSS IP V  A  S+ GV+S  ++                 L   +
Sbjct: 340  TSAVSDHASPLVVSGSSAIPAVTPAMPSSSGVSSPAVS----------GSTGSATLANAS 389

Query: 1863 TATMSSFENLSSHDAANSLDGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLVYATK 1684
               MS FENLS    A+SL GAS+QDIEEAKKGMAVAGKVNV P EEKT ++EP +YATK
Sbjct: 390  QKQMSGFENLSPQ-VASSLSGASIQDIEEAKKGMAVAGKVNVVPAEEKTTEEEPFLYATK 448

Query: 1683 QEAKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXXXXXX 1504
            QEAKNAFKALLE ANVESDWTWEQTMRVII DKRY ALKTLGERKQAFNEYL        
Sbjct: 449  QEAKNAFKALLEFANVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEA 508

Query: 1503 XXXXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLFRTYL 1324
                        EFTKM          TRWSKA+TMFEDDERF AVER  +REDLFR YL
Sbjct: 509  EERRHRQRKAKEEFTKMLEESKELISSTRWSKAVTMFEDDERFKAVEREADREDLFRNYL 568

Query: 1323 VDLXXXXXXXXXXXQRRNRLEYRQFLETCSFIKVNSQWRKVQDRLEDDERCSRLDKFDRL 1144
            VDL            R NRLEYRQFLETC FIKV++QWRKVQD LEDDERCSRL+K DRL
Sbjct: 569  VDLQKKERAKAQEEYRHNRLEYRQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKIDRL 628

Query: 1143 EIFTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAKTHWRDYFM 964
            +IF EYIRD                 R ERKNRD FRKMMEE IAAGTLTAKT WRDY  
Sbjct: 629  DIFQEYIRDLEKEDEEQRKLQKEQLRRTERKNRDAFRKMMEEQIAAGTLTAKTSWRDYCQ 688

Query: 963  KVKDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKIIITSTWTMD 784
             VK+ V YQ V+SNTSGSTPKDLF+DVVEELEKQYHEDK R+KD VK  KI I+STWT +
Sbjct: 689  MVKEYVAYQAVASNTSGSTPKDLFEDVVEELEKQYHEDKIRVKDVVKSEKITISSTWTFE 748

Query: 783  DFKDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDLLSTFKEIT 604
            DFK AIL+ IGSP I D+NL+L+FED++               RL +DFTD LST KEIT
Sbjct: 749  DFKAAILEGIGSPSIHDVNLQLIFEDIIERAKEKEEKESKKRQRLAKDFTDKLSTIKEIT 808

Query: 603  ASSDWEECKQLFEESSEFRSIGEESFRREIFEEYIAHLQ 487
            ASS WEECK+L E+SSEFR+IGEE+  R +FEEY+A LQ
Sbjct: 809  ASSSWEECKELVEDSSEFRAIGEETISRAVFEEYVAWLQ 847


>ref|XP_009606231.1| PREDICTED: pre-mRNA-processing protein 40A isoform X2 [Nicotiana
            tomentosiformis]
          Length = 1042

 Score =  919 bits (2375), Expect = 0.0
 Identities = 513/879 (58%), Positives = 577/879 (65%), Gaps = 6/879 (0%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVGPQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPVG 2926
            MA+N   SG QP  PP++GS  PQ FG  FPMQFRP V  QQGQPF  +  AS Q+RP+G
Sbjct: 1    MASNPPPSGPQPLWPPSVGSTPPQGFGSSFPMQFRPAVSTQQGQPFASSISASPQYRPIG 60

Query: 2925 QGIPSPNVGMPSSQGQPLQYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGSP 2746
            Q   +PN GMP   GQ  Q+SQPMQQ PPRP QP     SSQAI M +IQ +MP      
Sbjct: 61   Q---TPNAGMPPGHGQIPQFSQPMQQFPPRPSQPGHGILSSQAIQMPFIQSSMP------ 111

Query: 2745 QTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAPV 2566
            Q QQ  P LN+HMPG+ G G PFSSSYT         LS  N+ SQ Q  SQMH P  P 
Sbjct: 112  QPQQVIPPLNSHMPGVSGAGNPFSSSYT--------ALSGLNMPSQVQSSSQMHVPPFPS 163

Query: 2565 GGQHWLPTGSHGAP-----LVTSVQETGQQPSVTAGANVPNATQQSSSDWQEH-MSDGRR 2404
            GGQ WL +GS   P     L+TS Q +   PSV AG     A+QQ++SDWQE+  +DGRR
Sbjct: 164  GGQPWLSSGSQTTPVAAPTLLTSQQLSAIAPSVPAGT----ASQQNASDWQEYEAADGRR 219

Query: 2403 YYYNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDLK 2224
            YYYNK TKQSSWEKPLELMT +ERADASTVWKEF+T DGRKYYYNK TKQSKWTIPE+LK
Sbjct: 220  YYYNKITKQSSWEKPLELMTTLERADASTVWKEFTTADGRKYYYNKETKQSKWTIPEELK 279

Query: 2223 LAREQAEKSATQGTESEINMTPNAQASDMVSSVEQPSAAVIRMXXXXXXXXXXXXSXXXX 2044
            LARE AEKSA Q  ++  +     Q +  V+S EQPSA                 S    
Sbjct: 280  LARELAEKSADQVVQTGASTISGVQVTAAVTSTEQPSAVTPVSSTPSSTVSGVASSPVPV 339

Query: 2043 XXXXXXXXXXXXVSGSSDIPVVHSAATSAVGVNSLGITVDXXXXXXXXXXXXXXALVGTN 1864
                        VSGSS IP V  A  S+ GV+S  ++                 L   +
Sbjct: 340  TSAVSDHASPLVVSGSSAIPAVTPAMPSSSGVSSPAVS----------GSTGSATLANAS 389

Query: 1863 TATMSSFENLSSHDAANSLDGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLVYATK 1684
               MS FENLS    A+SL GAS+QDIEEAKKGMAVAGKVNV P EEKT ++EP +YATK
Sbjct: 390  QKQMSGFENLSPQ-VASSLSGASIQDIEEAKKGMAVAGKVNVVPAEEKTTEEEPFLYATK 448

Query: 1683 QEAKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXXXXXX 1504
            QEAKNAFKALLE ANVESDWTWEQTMRVII DKRY ALKTLGERKQAFNEYL        
Sbjct: 449  QEAKNAFKALLEFANVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEA 508

Query: 1503 XXXXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLFRTYL 1324
                        EFTKM          TRWSKA+TMFEDDERF AVER  +REDLFR YL
Sbjct: 509  EERRHRQRKAKEEFTKMLEESKELISSTRWSKAVTMFEDDERFKAVEREADREDLFRNYL 568

Query: 1323 VDLXXXXXXXXXXXQRRNRLEYRQFLETCSFIKVNSQWRKVQDRLEDDERCSRLDKFDRL 1144
            VDL            R NRLEYRQFLETC FIKV++QWRKVQD LEDDERCSRL+K DRL
Sbjct: 569  VDLQKKERAKAQEEYRHNRLEYRQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKIDRL 628

Query: 1143 EIFTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAKTHWRDYFM 964
            +IF EYIRD                 R ERKNRD FRKMMEE IAAGTLTAKT WRDY  
Sbjct: 629  DIFQEYIRDLEKEDEEQRKLQKEQLRRTERKNRDAFRKMMEEQIAAGTLTAKTSWRDYCQ 688

Query: 963  KVKDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKIIITSTWTMD 784
             VK+ V YQ V+SNTSGSTPKDLF+DVVEELEKQYHEDK R+KD VK  KI I+STWT +
Sbjct: 689  MVKEYVAYQAVASNTSGSTPKDLFEDVVEELEKQYHEDKIRVKDVVKSEKITISSTWTFE 748

Query: 783  DFKDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDLLSTFKEIT 604
            DFK AIL+ IGSP I D+NL+L+FED++               RL +DFTD LST KEIT
Sbjct: 749  DFKAAILEGIGSPSIHDVNLQLIFEDIIERAKEKEEKESKKRQRLAKDFTDKLSTIKEIT 808

Query: 603  ASSDWEECKQLFEESSEFRSIGEESFRREIFEEYIAHLQ 487
            ASS WEECK+L E+SSEFR+IGEE+  R +FEEY+A LQ
Sbjct: 809  ASSSWEECKELVEDSSEFRAIGEETISRAVFEEYVAWLQ 847


>ref|XP_007018439.1| Pre-mRNA-processing protein 40A isoform 4 [Theobroma cacao]
            gi|508723767|gb|EOY15664.1| Pre-mRNA-processing protein
            40A isoform 4 [Theobroma cacao]
          Length = 844

 Score =  912 bits (2358), Expect = 0.0
 Identities = 489/845 (57%), Positives = 572/845 (67%), Gaps = 14/845 (1%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVGPQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPVG 2926
            MANN+Q S AQP  PPA+GS+GPQS+G P   QFRPVVP QQGQ F+PA  ASQQFRPVG
Sbjct: 1    MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPA--ASQQFRPVG 58

Query: 2925 QGIPSPNVGMPSSQGQPLQYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGSP 2746
            Q +PS NVGMP+ Q Q +Q+SQPMQQ PPRP QP L+  S+Q + + + Q N PL SGSP
Sbjct: 59   Q-VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSP 117

Query: 2745 QTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAPV 2566
            Q+ QTAP LN+HMPGLG PG P SSSY++ PSSFGQP +  + SSQ+QP SQ+HA VAPV
Sbjct: 118  QSHQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPV 177

Query: 2565 GGQHWLPTGSHGAPLVTSVQETGQQP----SVTAGANVPNATQQSSSDWQEHMS-DGRRY 2401
             GQ WL +G+    L   +Q+TGQQP    S    AN P  T  S+SDWQEH S DGRRY
Sbjct: 178  AGQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGRRY 237

Query: 2400 YYNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDLKL 2221
            YYNKKT+QSSWEKPLELMTPIERADASTVWKEF+T +GRKYYYNK+TKQSKWTIPE+LKL
Sbjct: 238  YYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKL 297

Query: 2220 AREQAEKSATQGTESEINMTPNAQASDMVSSVEQPSAAVIRMXXXXXXXXXXXXSXXXXX 2041
            AREQA+  A+QG  S+  +   A  +  VSS E P+AA+                     
Sbjct: 298  AREQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAI----PVSSNTSQASSPVSVTP 353

Query: 2040 XXXXXXXXXXXVSGSSDIPVVHSAATSAVGVNSLGITVDXXXXXXXXXXXXXXALVGTNT 1861
                       VSGS+ +PV  SAAT+A  V S  + V                 V  NT
Sbjct: 354  VAAVANPSPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANT 413

Query: 1860 ATMSSFENLSSHDAANSLDGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLVYATKQ 1681
              + S E+ +S D+ +  +GAS QDIEEAKKGMA AGKVNVTP+EEK  DDEPLVYA KQ
Sbjct: 414  TMIRSLESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQ 473

Query: 1680 EAKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXXXXXXX 1501
            EAKNAFK+LLESANV+SDWTWEQTMR II DKRY ALKTLGERKQAFNEYLG        
Sbjct: 474  EAKNAFKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAE 533

Query: 1500 XXXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLFRTYLV 1321
                       EFTKM           RWSKA ++FE+DERF AVER+ +REDLF  Y+V
Sbjct: 534  ERRMRQKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIV 593

Query: 1320 DLXXXXXXXXXXXQRRNRLEYRQFLETCSFIKV---------NSQWRKVQDRLEDDERCS 1168
            +L           +RRN  EYR+FLE+C FIKV         NSQWRKVQDRLEDDERCS
Sbjct: 594  ELERKERENAAEEKRRNIAEYRKFLESCDFIKVQHFQKRIQANSQWRKVQDRLEDDERCS 653

Query: 1167 RLDKFDRLEIFTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAK 988
            RL+K DRL +F +YI D                 RAERKNRD FRK+M+EH+  GTLTAK
Sbjct: 654  RLEKIDRLVMFQDYIHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHVVDGTLTAK 713

Query: 987  THWRDYFMKVKDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKII 808
            T+WRDY +KVKD  PY  V+SNTSGSTPKDLF+DVVEELEKQY +DKT IKDA+K GKI 
Sbjct: 714  TYWRDYCLKVKDLPPYLAVASNTSGSTPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKIS 773

Query: 807  ITSTWTMDDFKDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDL 628
            + STWT++DFK AI +D+GS PISDINLKLV+E+L+               RL  DFT L
Sbjct: 774  MVSTWTVEDFKAAISEDVGSLPISDINLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKL 833

Query: 627  LSTFK 613
            L T+K
Sbjct: 834  LHTYK 838


>ref|XP_009361094.1| PREDICTED: pre-mRNA-processing protein 40A [Pyrus x bretschneideri]
          Length = 1023

 Score =  909 bits (2349), Expect = 0.0
 Identities = 488/879 (55%), Positives = 594/879 (67%), Gaps = 6/879 (0%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVGPQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPVG 2926
            MANN QSS AQP RPP +  +GPQSFG   P+Q+RPVVP QQGQ FI    ASQQF+P+G
Sbjct: 1    MANNPQSSAAQPFRPPPVAPMGPQSFGSS-PLQYRPVVPTQQGQQFISP--ASQQFQPMG 57

Query: 2925 QGIPSPNVGMPSSQGQPLQYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGSP 2746
            QGIPSPNVGMP+SQ Q LQYSQPMQ  P RP QP L   SSQA+PMQY+Q   P+ S   
Sbjct: 58   QGIPSPNVGMPASQSQQLQYSQPMQPYPLRPSQPGLP-HSSQALPMQYMQTR-PITSIPS 115

Query: 2745 QTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAPV 2566
            Q+QQ  P  NN MPG+     P+SSSY F P ++ QP +  NV+SQ+QP+SQ+ A V   
Sbjct: 116  QSQQPVPPFNNQMPGM-----PYSSSYVFTPPTYAQPQN--NVNSQFQPMSQVQAHVVSA 168

Query: 2565 GGQHWLPTGSHGAPLVTSVQETGQQ----PSVTAGANVPNATQQSSSDWQEHMS-DGRRY 2401
             GQ W+ +G+ GA + + V ++ QQ    PS  +  NVP+  QQSSSDWQEH++ DGRRY
Sbjct: 169  TGQPWVSSGNQGAAVPSPVHQSSQQSSSTPSTDSALNVPSQAQQSSSDWQEHLAVDGRRY 228

Query: 2400 YYNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDLKL 2221
            Y+N++T+QS+WEKPLELMTP+ERADASTVWKE+++ DG+KYYYNK+T++SKWTIPE+LKL
Sbjct: 229  YFNRRTRQSNWEKPLELMTPMERADASTVWKEYTSADGKKYYYNKVTRESKWTIPEELKL 288

Query: 2220 AREQAEKSATQGTESEINMTPNAQASDMVSSVEQP-SAAVIRMXXXXXXXXXXXXSXXXX 2044
            AREQA++   QGT SE+N+T +   +  V+S E P  A+ +                   
Sbjct: 289  AREQAQRELIQGTHSELNLTSHTPPA--VASAETPMGASSVGPSTSSALPVMVSSPVAVT 346

Query: 2043 XXXXXXXXXXXXVSGSSDIPVVHSAATSAVGVNSLGITVDXXXXXXXXXXXXXXALVGTN 1864
                         +GSS       +   AVG     +TV                 V T 
Sbjct: 347  PVSSFSNPSPITPTGSSVASGAQPSIIGAVGSQPSAVTVSPLPASVSGSSGVPPTSVNTT 406

Query: 1863 TATMSSFENLSSHDAANSLDGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLVYATK 1684
            T ++S++E ++S D ++S DG   QDIEEAK+GMAVAGKVNVTP EEKT DDEPLVYA K
Sbjct: 407  TNSVSTYETVASQDISSSADGTLTQDIEEAKRGMAVAGKVNVTPSEEKTFDDEPLVYANK 466

Query: 1683 QEAKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXXXXXX 1504
            QEAK AFK+LLESANV+SDWTWEQTMR IITDKRY AL+TLGERKQAFNEYLG       
Sbjct: 467  QEAKTAFKSLLESANVQSDWTWEQTMREIITDKRYGALRTLGERKQAFNEYLGQRKKLEN 526

Query: 1503 XXXXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLFRTYL 1324
                        EFTKM          TRWSKA++MFE+DERF AVER  +REDL+ +Y+
Sbjct: 527  EERRMRQKKAREEFTKMLEESKELTSATRWSKAVSMFENDERFKAVERGRDREDLYESYI 586

Query: 1323 VDLXXXXXXXXXXXQRRNRLEYRQFLETCSFIKVNSQWRKVQDRLEDDERCSRLDKFDRL 1144
            V+L            ++N +EYR+FLE+C FIKVNSQWRKVQDRLEDDERC RL+K  RL
Sbjct: 587  VELERKEKEKAAEDHKQNIVEYRKFLESCDFIKVNSQWRKVQDRLEDDERCLRLEKLARL 646

Query: 1143 EIFTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAKTHWRDYFM 964
             IF +YIRD                 R ERKNRDEFRK+MEEH+A GTLTAKT WRDY M
Sbjct: 647  LIFQDYIRDLEKVEEEQKKLQKEQLRRVERKNRDEFRKLMEEHVADGTLTAKTLWRDYCM 706

Query: 963  KVKDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKIIITSTWTMD 784
            KVKD  PY+ V+ NTSGSTPK+LFDDV EELEKQYH+DK RIKDA+K GK  +TST   +
Sbjct: 707  KVKDLPPYEAVALNTSGSTPKELFDDVFEELEKQYHDDKARIKDAMKSGKFTMTSTLAFE 766

Query: 783  DFKDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDLLSTFKEIT 604
            +FK  IL+DIGSPPISDIN KLV+E+L+               RL  DF  LL T KEIT
Sbjct: 767  EFKVPILEDIGSPPISDINFKLVYEELLERAKEKEDKEAKKRQRLADDFNKLLHTIKEIT 826

Query: 603  ASSDWEECKQLFEESSEFRSIGEESFRREIFEEYIAHLQ 487
            ASS+W++ KQLFEE+ E+RS+GE+S  REIFEEYI  L+
Sbjct: 827  ASSNWDDSKQLFEETQEYRSVGEDSVSREIFEEYITSLR 865


>ref|XP_009606233.1| PREDICTED: pre-mRNA-processing protein 40A isoform X4 [Nicotiana
            tomentosiformis]
          Length = 1032

 Score =  907 bits (2344), Expect = 0.0
 Identities = 508/879 (57%), Positives = 571/879 (64%), Gaps = 6/879 (0%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVGPQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPVG 2926
            MA+N   SG QP  PP++GS  PQ FG  FPMQFRP V  QQGQPF  +  AS Q+RP+G
Sbjct: 1    MASNPPPSGPQPLWPPSVGSTPPQGFGSSFPMQFRPAVSTQQGQPFASSISASPQYRPIG 60

Query: 2925 QGIPSPNVGMPSSQGQPLQYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGSP 2746
            Q   +PN GMP   GQ  Q+SQPMQQ PPRP QP     SSQAI M +IQ +MP      
Sbjct: 61   Q---TPNAGMPPGHGQIPQFSQPMQQFPPRPSQPGHGILSSQAIQMPFIQSSMP------ 111

Query: 2745 QTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAPV 2566
            Q QQ  P LN+HMPG+ G G PFSSSYT   SS                  QMH P  P 
Sbjct: 112  QPQQVIPPLNSHMPGVSGAGNPFSSSYTVQSSS------------------QMHVPPFPS 153

Query: 2565 GGQHWLPTGSHGAP-----LVTSVQETGQQPSVTAGANVPNATQQSSSDWQEH-MSDGRR 2404
            GGQ WL +GS   P     L+TS Q +   PSV AG     A+QQ++SDWQE+  +DGRR
Sbjct: 154  GGQPWLSSGSQTTPVAAPTLLTSQQLSAIAPSVPAGT----ASQQNASDWQEYEAADGRR 209

Query: 2403 YYYNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDLK 2224
            YYYNK TKQSSWEKPLELMT +ERADASTVWKEF+T DGRKYYYNK TKQSKWTIPE+LK
Sbjct: 210  YYYNKITKQSSWEKPLELMTTLERADASTVWKEFTTADGRKYYYNKETKQSKWTIPEELK 269

Query: 2223 LAREQAEKSATQGTESEINMTPNAQASDMVSSVEQPSAAVIRMXXXXXXXXXXXXSXXXX 2044
            LARE AEKSA Q  ++  +     Q +  V+S EQPSA                 S    
Sbjct: 270  LARELAEKSADQVVQTGASTISGVQVTAAVTSTEQPSAVTPVSSTPSSTVSGVASSPVPV 329

Query: 2043 XXXXXXXXXXXXVSGSSDIPVVHSAATSAVGVNSLGITVDXXXXXXXXXXXXXXALVGTN 1864
                        VSGSS IP V  A  S+ GV+S  ++                 L   +
Sbjct: 330  TSAVSDHASPLVVSGSSAIPAVTPAMPSSSGVSSPAVS----------GSTGSATLANAS 379

Query: 1863 TATMSSFENLSSHDAANSLDGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLVYATK 1684
               MS FENLS    A+SL GAS+QDIEEAKKGMAVAGKVNV P EEKT ++EP +YATK
Sbjct: 380  QKQMSGFENLSPQ-VASSLSGASIQDIEEAKKGMAVAGKVNVVPAEEKTTEEEPFLYATK 438

Query: 1683 QEAKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXXXXXX 1504
            QEAKNAFKALLE ANVESDWTWEQTMRVII DKRY ALKTLGERKQAFNEYL        
Sbjct: 439  QEAKNAFKALLEFANVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEA 498

Query: 1503 XXXXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLFRTYL 1324
                        EFTKM          TRWSKA+TMFEDDERF AVER  +REDLFR YL
Sbjct: 499  EERRHRQRKAKEEFTKMLEESKELISSTRWSKAVTMFEDDERFKAVEREADREDLFRNYL 558

Query: 1323 VDLXXXXXXXXXXXQRRNRLEYRQFLETCSFIKVNSQWRKVQDRLEDDERCSRLDKFDRL 1144
            VDL            R NRLEYRQFLETC FIKV++QWRKVQD LEDDERCSRL+K DRL
Sbjct: 559  VDLQKKERAKAQEEYRHNRLEYRQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKIDRL 618

Query: 1143 EIFTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAKTHWRDYFM 964
            +IF EYIRD                 R ERKNRD FRKMMEE IAAGTLTAKT WRDY  
Sbjct: 619  DIFQEYIRDLEKEDEEQRKLQKEQLRRTERKNRDAFRKMMEEQIAAGTLTAKTSWRDYCQ 678

Query: 963  KVKDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKIIITSTWTMD 784
             VK+ V YQ V+SNTSGSTPKDLF+DVVEELEKQYHEDK R+KD VK  KI I+STWT +
Sbjct: 679  MVKEYVAYQAVASNTSGSTPKDLFEDVVEELEKQYHEDKIRVKDVVKSEKITISSTWTFE 738

Query: 783  DFKDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDLLSTFKEIT 604
            DFK AIL+ IGSP I D+NL+L+FED++               RL +DFTD LST KEIT
Sbjct: 739  DFKAAILEGIGSPSIHDVNLQLIFEDIIERAKEKEEKESKKRQRLAKDFTDKLSTIKEIT 798

Query: 603  ASSDWEECKQLFEESSEFRSIGEESFRREIFEEYIAHLQ 487
            ASS WEECK+L E+SSEFR+IGEE+  R +FEEY+A LQ
Sbjct: 799  ASSSWEECKELVEDSSEFRAIGEETISRAVFEEYVAWLQ 837


>ref|XP_009765765.1| PREDICTED: pre-mRNA-processing protein 40A isoform X2 [Nicotiana
            sylvestris]
          Length = 1044

 Score =  902 bits (2332), Expect = 0.0
 Identities = 506/880 (57%), Positives = 571/880 (64%), Gaps = 7/880 (0%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVGPQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPVG 2926
            MA+N   SG QP  PP++GS  PQ FG  FPMQ        QGQPF  +  AS Q+RPVG
Sbjct: 1    MASNPPPSGPQPLWPPSVGSTPPQGFGSSFPMQ--------QGQPFASSISASPQYRPVG 52

Query: 2925 QGIPSPNVGMPSSQGQPL-QYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGS 2749
            Q   + N GMP      + Q+SQPMQQ PPRP QP      SQAI M +IQ +MP     
Sbjct: 53   Q---TSNAGMPPGHHSQIPQFSQPMQQFPPRPNQPGHGILLSQAIQMPFIQSSMP----- 104

Query: 2748 PQTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAP 2569
             Q QQ  P LN+HMPG+ G G PFSSSYTFAP  F   LS  N+ SQ Q  SQMH P  P
Sbjct: 105  -QPQQVIPPLNSHMPGVSGAGNPFSSSYTFAPPPFAHALSGLNMPSQVQSSSQMHVPSFP 163

Query: 2568 VGGQHWLPTGSHGAPLVTSVQETGQQ-----PSVTAGANVPNATQQSSSDWQEH-MSDGR 2407
             GGQ WL +GS   P+      T QQ     PSV AG     A+ Q++SDWQE+  +DGR
Sbjct: 164  SGGQPWLSSGSQNTPVTAPTLLTNQQLSAIAPSVPAGT----ASPQNASDWQEYEAADGR 219

Query: 2406 RYYYNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDL 2227
            RYYYNK TKQSSWEKPLELMTP+ERADASTVWKEF+T DGRKYYYNK TKQSKWTIPE+L
Sbjct: 220  RYYYNKITKQSSWEKPLELMTPLERADASTVWKEFTTADGRKYYYNKETKQSKWTIPEEL 279

Query: 2226 KLAREQAEKSATQGTESEINMTPNAQASDMVSSVEQPSAAVIRMXXXXXXXXXXXXSXXX 2047
            KLARE AEKSA Q  ++  + T   Q +  V+S EQPSA                 S   
Sbjct: 280  KLARELAEKSAGQVVQTGASTTSGVQVTAAVTSTEQPSAVTPVSSTPSSTVSGVASSPVP 339

Query: 2046 XXXXXXXXXXXXXVSGSSDIPVVHSAATSAVGVNSLGITVDXXXXXXXXXXXXXXALVGT 1867
                         VSGSS IP V  A  S+ GV+S  ++                AL   
Sbjct: 340  VTSAVSDHASPLVVSGSSAIPAVTPAMPSSSGVSSPAVS----------GSTGSAALANA 389

Query: 1866 NTATMSSFENLSSHDAANSLDGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLVYAT 1687
            +   MS FENLS    ++SL GAS+QDIEEAKKGMAVAGKVNV P EEKT ++EP +YAT
Sbjct: 390  SQTQMSGFENLSPQ-VSSSLSGASIQDIEEAKKGMAVAGKVNVVPAEEKTTEEEPFLYAT 448

Query: 1686 KQEAKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXXXXX 1507
            KQEAKNAFKALLE ANVESDWTWEQTMRVII DKRY ALKTLGERKQAFNEYL       
Sbjct: 449  KQEAKNAFKALLEFANVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQE 508

Query: 1506 XXXXXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLFRTY 1327
                         EFTKM          TRWSKA+TMFEDDERF AVER  +REDLFR Y
Sbjct: 509  AEERRHRQRKAKEEFTKMLEESKELISSTRWSKAVTMFEDDERFKAVEREADREDLFRNY 568

Query: 1326 LVDLXXXXXXXXXXXQRRNRLEYRQFLETCSFIKVNSQWRKVQDRLEDDERCSRLDKFDR 1147
            LVDL            R+NRLEYR FLETC FIKV++QWRKVQD LEDDERC RL+K DR
Sbjct: 569  LVDLQKKERAKAQEEYRQNRLEYRHFLETCGFIKVDTQWRKVQDLLEDDERCLRLEKIDR 628

Query: 1146 LEIFTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAKTHWRDYF 967
            L+IF EYIRD                 R ERKNRD FRKMMEE I AGTLTAKT WRDY 
Sbjct: 629  LDIFQEYIRDLEKEDEEQRKLQKEQLRRTERKNRDAFRKMMEEQITAGTLTAKTSWRDYC 688

Query: 966  MKVKDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKIIITSTWTM 787
              VK+SV YQ V+SNTSGSTPKDLF+DVVEELEKQYHEDK R+KD VK  KI I+STWT 
Sbjct: 689  QMVKESVAYQAVASNTSGSTPKDLFEDVVEELEKQYHEDKIRVKDVVKSEKITISSTWTF 748

Query: 786  DDFKDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDLLSTFKEI 607
            +DFK  IL+ IGSP I D+NL+L+FEDL+               RL +DFTD LST KEI
Sbjct: 749  EDFKATILEGIGSPSIHDVNLQLIFEDLIERAKEKEEKETKKRQRLAKDFTDKLSTIKEI 808

Query: 606  TASSDWEECKQLFEESSEFRSIGEESFRREIFEEYIAHLQ 487
            TASS WEECK+L E++SEFR+IGEE+  R +FEEY+A LQ
Sbjct: 809  TASSSWEECKELVEDTSEFRAIGEETISRAVFEEYVAWLQ 848


>ref|XP_008365587.1| PREDICTED: pre-mRNA-processing protein 40A-like [Malus domestica]
          Length = 1019

 Score =  902 bits (2331), Expect = 0.0
 Identities = 493/880 (56%), Positives = 597/880 (67%), Gaps = 7/880 (0%)
 Frame = -2

Query: 3105 MANNTQSSGAQPPRPPALGSVGPQSFGPPFPMQFRPVVPAQQGQPFIPATLASQQFRPVG 2926
            MANN QSS  QP RPP + S+GPQSFG   P+Q+RPVVP QQGQ FIP   ASQQF+PVG
Sbjct: 1    MANNPQSSAGQPFRPPPVASMGPQSFGSS-PLQYRPVVPTQQGQQFIPP--ASQQFQPVG 57

Query: 2925 QGIPSPNVGMPSSQGQPLQYSQPMQQLPPRPGQPSLATSSSQAIPMQYIQPNMPLMSGSP 2746
            QGIPSPNVGMP SQ Q LQYSQPMQ  P RP QP  A  SSQA+PMQY+Q    + S   
Sbjct: 58   QGIPSPNVGMPGSQSQQLQYSQPMQPYPLRPSQPGHA-HSSQALPMQYMQTRPTVPS--- 113

Query: 2745 QTQQTAPHLNNHMPGLGGPGAPFSSSYTFAPSSFGQPLSAANVSSQYQPLSQMHAPVAPV 2566
            Q+QQ  P  NN MPG+     P+SSSY FAP ++ Q  +  NVSSQ+QP+SQ+ A V   
Sbjct: 114  QSQQPVPPFNNQMPGM-----PYSSSYMFAPPTYVQQQN--NVSSQFQPMSQVQAHVVSA 166

Query: 2565 GGQHWLPTGSHGAPLVTSVQETGQQPSVT----AGANVPNATQQSSSDWQEHMS-DGRRY 2401
             GQ W+ +G+ GA + + VQ+ GQQ S T    +  NVP+  QQSSSDWQEHM+ DGRRY
Sbjct: 167  TGQPWVSSGNQGAAVPSPVQQPGQQSSSTLSTDSAVNVPSQIQQSSSDWQEHMAADGRRY 226

Query: 2400 YYNKKTKQSSWEKPLELMTPIERADASTVWKEFSTTDGRKYYYNKITKQSKWTIPEDLKL 2221
            Y+N++T++S+WEKPLELMTP+ERADASTVWKE+++ DG+KYYYNK+T++SKWTIPE+LKL
Sbjct: 227  YFNRRTRESNWEKPLELMTPMERADASTVWKEYTSADGKKYYYNKVTRESKWTIPEELKL 286

Query: 2220 AREQAEKSATQGTESEINMTPNAQASDMVSSVEQP-SAAVIRMXXXXXXXXXXXXSXXXX 2044
            AREQA++   QGT SE+N+T +   +  V+S E P   + +                   
Sbjct: 287  AREQAQRELIQGTHSEMNLTSHTPPA--VASAETPMGTSSVGPSTSSALPGMVPSPVAVT 344

Query: 2043 XXXXXXXXXXXXVSGSSDIPVVHSAATSAVGVNSLGITVDXXXXXXXXXXXXXXALVGTN 1864
                         +GSS      S+ T AVGV    +TV                 V T 
Sbjct: 345  PVSSFSNPSPTAPTGSSVASGAESSITGAVGVQPPAVTVTPVPASVSGSTGVPPTSVNTT 404

Query: 1863 TATMSSFENLSSHDAANSL-DGASMQDIEEAKKGMAVAGKVNVTPLEEKTIDDEPLVYAT 1687
            T ++S++E ++S D A+S  DG   QDIEEAK+GMAVAGKVNVTP EEKT DDEPLVYA 
Sbjct: 405  TNSVSTYETVASQDIASSAADGTLTQDIEEAKRGMAVAGKVNVTPSEEKTFDDEPLVYAN 464

Query: 1686 KQEAKNAFKALLESANVESDWTWEQTMRVIITDKRYAALKTLGERKQAFNEYLGXXXXXX 1507
            KQEAK AFK+LLESANV+SDWTWEQTMR IITDKRY ALKTLGERKQAFNEYLG      
Sbjct: 465  KQEAKTAFKSLLESANVQSDWTWEQTMREIITDKRYGALKTLGERKQAFNEYLGQRKKLE 524

Query: 1506 XXXXXXXXXXXXXEFTKMXXXXXXXXXXTRWSKAITMFEDDERFNAVERSGEREDLFRTY 1327
                         EFTKM          TRWSKA++MFE+DERF AVER+ +REDL+ +Y
Sbjct: 525  NEERRMRQKKAREEFTKMLEESRELTSATRWSKAVSMFENDERFKAVERARDREDLYESY 584

Query: 1326 LVDLXXXXXXXXXXXQRRNRLEYRQFLETCSFIKVNSQWRKVQDRLEDDERCSRLDKFDR 1147
            +V+L            ++N +EYR+FLE+C FIKVNSQWRKVQDRLEDDERC RL+K  R
Sbjct: 585  IVELERKEKQKAAEEHKQNIVEYRKFLESCDFIKVNSQWRKVQDRLEDDERCLRLEKLAR 644

Query: 1146 LEIFTEYIRDXXXXXXXXXXXXXXXXXRAERKNRDEFRKMMEEHIAAGTLTAKTHWRDYF 967
            L IF +YIRD                 R ERKNRDEFRK++EEH+A GTLTAKT WRDY 
Sbjct: 645  LLIFQDYIRDLEKVEEEQKKLQKEQLRREERKNRDEFRKLLEEHVADGTLTAKTLWRDYC 704

Query: 966  MKVKDSVPYQGVSSNTSGSTPKDLFDDVVEELEKQYHEDKTRIKDAVKLGKIIITSTWTM 787
             KVKD  PY+ V+ NTSGSTPK+LFDDV EELEKQYH+DK RIKDAVK GK+ +TST   
Sbjct: 705  TKVKDLPPYEAVALNTSGSTPKELFDDVFEELEKQYHDDKARIKDAVKSGKVTMTSTLAF 764

Query: 786  DDFKDAILDDIGSPPISDINLKLVFEDLVXXXXXXXXXXXXXXXRLVQDFTDLLSTFKEI 607
            ++FK  IL+DIGSPPISDIN KLV+E+L+               RLV DF +LL T KEI
Sbjct: 765  EEFKVPILEDIGSPPISDINFKLVYEELLERAKEKEEKEAKKRQRLVDDFNNLLHTIKEI 824

Query: 606  TASSDWEECKQLFEESSEFRSIGEESFRREIFEEYIAHLQ 487
            +A+S+WE+ K LFEE+ E+RSIG+    RE+FEEYI +LQ
Sbjct: 825  SAASNWEDSKHLFEETQEYRSIGD---GREVFEEYITNLQ 861