BLASTX nr result
ID: Cornus23_contig00005805
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00005805
(3503 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008237947.1| PREDICTED: transcription initiation factor T... 884 0.0
ref|XP_008237946.1| PREDICTED: transcription initiation factor T... 878 0.0
ref|XP_008237948.1| PREDICTED: transcription initiation factor T... 871 0.0
ref|XP_009372608.1| PREDICTED: transcription initiation factor T... 868 0.0
emb|CDP01217.1| unnamed protein product [Coffea canephora] 866 0.0
ref|XP_009372609.1| PREDICTED: transcription initiation factor T... 863 0.0
ref|XP_006433616.1| hypothetical protein CICLE_v10000177mg [Citr... 862 0.0
gb|KDO81553.1| hypothetical protein CISIN_1g048675mg [Citrus sin... 862 0.0
ref|XP_006472283.1| PREDICTED: transcription initiation factor T... 860 0.0
ref|XP_008373393.1| PREDICTED: transcription initiation factor T... 835 0.0
ref|XP_007018536.1| TBP-associated factor 4, putative isoform 1 ... 833 0.0
ref|XP_011465030.1| PREDICTED: transcription initiation factor T... 819 0.0
ref|XP_007018537.1| TBP-associated factor 4, putative isoform 2 ... 818 0.0
ref|XP_012466579.1| PREDICTED: transcription initiation factor T... 789 0.0
ref|XP_012466578.1| PREDICTED: transcription initiation factor T... 788 0.0
ref|XP_011017133.1| PREDICTED: transcription initiation factor T... 787 0.0
ref|XP_012446631.1| PREDICTED: transcription initiation factor T... 787 0.0
ref|XP_012466580.1| PREDICTED: transcription initiation factor T... 786 0.0
ref|XP_010272122.1| PREDICTED: transcription initiation factor T... 784 0.0
ref|XP_002510115.1| transcription initiation factor, putative [R... 783 0.0
>ref|XP_008237947.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X2 [Prunus mume]
Length = 961
Score = 884 bits (2285), Expect = 0.0
Identities = 530/971 (54%), Positives = 620/971 (63%), Gaps = 21/971 (2%)
Frame = -1
Query: 3239 MDPSIMK-LLEEDEDETMHSGADVEAFTAALNRDIEGDTSNSQPSDSDGAALXXXXXXXX 3063
MDPSIMK LLE+DEDETMHSGADVEAF AALNRDIEGD S SQPSDSD A L
Sbjct: 1 MDPSIMKKLLEDDEDETMHSGADVEAFQAALNRDIEGDMSVSQPSDSDSAVLSQGSNNTS 60
Query: 3062 XQLFPQWQTSSQDENANCXXXXXXXXXXXXXXS--ELAPKQHASGYENQQPQIDTSQERN 2889
Q PQ+ T+SQDEN C E+ KQ+ S EN Q + D S E N
Sbjct: 61 SQSLPQFHTASQDENTACQTQHDQKIAQQREMHSYEMELKQYGSVAENIQQKKDASHEFN 120
Query: 2888 CFPLQEKQAQKDSQQWQAEAEQNTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNSESQY 2709
FPL +KQ Q D QQ QAE + H +T + S K P+ E D P SESQY
Sbjct: 121 QFPLPQKQPQGDLQQGQAEQKP----LHKPETAGIPISGKIPISKHEQDIPPTPESESQY 176
Query: 2708 SKLQKMSNQHPMASEQAINPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLKKNEI 2529
KLQKMS+Q M EQ NPM+ KQVPF LLLPV+ PQLDKDRAMQL TL+ KLK NEI
Sbjct: 177 LKLQKMSSQQAMIPEQPSNPMNRSKQVPFGLLLPVLLPQLDKDRAMQLTTLFGKLKNNEI 236
Query: 2528 SKDVFVRHMRSLVGDQMLKMAVFKLQTQAARNSRTGPNQFPSQSQASVQQHHLKMQTIN- 2352
SKD FVRH+RS+VGDQMLK+AV K+Q+Q + P QASVQQ +M +I+
Sbjct: 237 SKDAFVRHIRSVVGDQMLKLAVMKVQSQPGPKHQLPP-------QASVQQQPPRMPSISV 289
Query: 2351 -GKQFPKPQSLAQLHQKGV--PEDPSHVPSTAAQLKSVSNNASIGNNAQKSQEVEXXXXX 2181
F P+S A LHQ+G P DPSH+PS+A Q +S S+++ I N+A+K +E E
Sbjct: 290 GSSPFTDPRSFA-LHQRGANPPTDPSHIPSSAVQAQSDSSHSVIENSAKKLREAERQSDS 348
Query: 2180 XXXXXXXXXXXXXSTLNQEKERCT-IPIXXXXXXXXXXXXXXXXXFPTYGNTGGNYPPFS 2004
NQE+ER P F YG+TGGNY P+S
Sbjct: 349 HGMQGSQMPSSSAVAGNQERERSAGPPQILNKQQQQQQLHYPQSSFAMYGSTGGNYHPYS 408
Query: 2003 GTNVNTSSTSLNQQPHDLQMRQVPVNQSTGASQS----VNVTSLPKFERQNSLSEQTRVQ 1836
T++NTS+ L QQPHD Q+RQ+P +Q G++QS VT++ K ERQNSL++ +R+Q
Sbjct: 409 ATSINTSTVPLKQQPHDSQLRQIPQHQGMGSTQSGGEPQGVTNVSKLERQNSLNDPSRLQ 468
Query: 1835 GGTLSHLTNNSALQQNSVHWQSSTGKVPKNGVPSSTTYVKQEPLDQLNEQQNKCQLSAPH 1656
GG++SH TNNS LQQNSV WQSS K G SS +YVKQEP+DQ EQQ K LS +
Sbjct: 469 GGSVSHFTNNSNLQQNSVPWQSSN-KEQNPGPVSSMSYVKQEPIDQTAEQQQKPPLS--N 525
Query: 1655 PQGLSAFSSAHIEQGNAIPGTSMGETFEMQSSRMGFXXXXXXXXXXXXXXXXXS------ 1494
QGL + S+A +EQG+A+PG S E+ E QSSRMGF S
Sbjct: 526 QQGLPSVSAAQLEQGSALPGISTDESLEKQSSRMGFATSGMVTSSSTGTVPPNSVSPSIM 585
Query: 1493 -QLDPNFLSSCRIVSSTSPIGPGSNGKAPTRKPYFGQKRPLEALGSSPPLSSKKQKVSGP 1317
Q+D N RI S TSP G + +AP +KP GQK+PLE GSSPP SSKKQK+SG
Sbjct: 586 TQVDTNVSLGHRIPSGTSPAG--ISNRAPPKKPSIGQKKPLEVPGSSPPPSSKKQKLSGN 643
Query: 1316 LSDQSIEQLNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRAVQEEEDRHFLQKRPLR 1137
DQSIEQLNDVTAVSGVNLREEEEQLFSG KEDSR SEASR+ VQEEE+R LQK PL+
Sbjct: 644 FLDQSIEQLNDVTAVSGVNLREEEEQLFSGPKEDSRASEASRKFVQEEEERLILQKAPLQ 703
Query: 1136 KKLAEIMARCDVKSISNDVERCLSLCVEERMHGLISNLIRLSKQRVDIEKARHRALITSD 957
KKLAEIM +C +KSISNDVERCLSLCVEERM GLI+NLIRLSKQRVD EK RH + TSD
Sbjct: 704 KKLAEIMVKCGLKSISNDVERCLSLCVEERMRGLINNLIRLSKQRVDAEKPRHHTITTSD 763
Query: 956 VRQQIMLMNXXXXXXXXXXXXXXXXXXKLDEPEGNPGVDGDKEKDEGRVKSLKANKEDDE 777
VRQQ+M +N +L+EPE N GVDGDK+KD+GR KS K NKE+D+
Sbjct: 764 VRQQVMNLNQNAREEFEKKQAEAEKLRRLNEPEVNNGVDGDKDKDDGRSKSFKPNKEEDD 823
Query: 776 KXXXXXXXXXXXXXXXXXXMLSKWQLMAEQARQKREGGIDVPSGSQPFNDVNHKPLSTFG 597
K MLSKWQLMAEQARQKREGGIDV SGSQP DVN KP ST G
Sbjct: 824 KMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGIDVASGSQPGKDVNRKPTSTAG 883
Query: 596 R--NANQEAEKRGQSAAFATSGLSRKFGRNQVAVPQPVVVRKISIKDVIAVLEREPQMSK 423
R NQEAEKRG A SG RK GRNQV PQ V R IS+KDVIAVLEREPQMS+
Sbjct: 884 RIMKDNQEAEKRGGGTPVAASGTIRKCGRNQVITPQTRVARSISVKDVIAVLEREPQMSR 943
Query: 422 STLIYQLHEKM 390
ST+IY+L E++
Sbjct: 944 STMIYRLFERI 954
>ref|XP_008237946.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X1 [Prunus mume]
Length = 962
Score = 878 bits (2269), Expect = 0.0
Identities = 529/972 (54%), Positives = 620/972 (63%), Gaps = 22/972 (2%)
Frame = -1
Query: 3239 MDPSIMK-LLEEDEDETMHSGADVEAFTAALNRDIEGDTSNSQPSDSDGAALXXXXXXXX 3063
MDPSIMK LLE+DEDETMHSGADVEAF AALNRDIEGD S SQPSDSD A L
Sbjct: 1 MDPSIMKKLLEDDEDETMHSGADVEAFQAALNRDIEGDMSVSQPSDSDSAVLSQGSNNTS 60
Query: 3062 XQLFPQWQTSSQDENANCXXXXXXXXXXXXXXS--ELAPKQHASGYENQQPQIDTSQERN 2889
Q PQ+ T+SQDEN C E+ KQ+ S EN Q + D S E N
Sbjct: 61 SQSLPQFHTASQDENTACQTQHDQKIAQQREMHSYEMELKQYGSVAENIQQKKDASHEFN 120
Query: 2888 CFPLQEKQAQKDSQQWQAEAEQNTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNSESQY 2709
FPL +KQ Q D QQ QAE + H +T + S K P+ E D P SESQY
Sbjct: 121 QFPLPQKQPQGDLQQGQAEQKP----LHKPETAGIPISGKIPISKHEQDIPPTPESESQY 176
Query: 2708 SKLQKMSNQHPMASEQAINPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLKKNEI 2529
KLQKMS+Q M EQ NPM+ KQVPF LLLPV+ PQLDKDRAMQL TL+ KLK NEI
Sbjct: 177 LKLQKMSSQQAMIPEQPSNPMNRSKQVPFGLLLPVLLPQLDKDRAMQLTTLFGKLKNNEI 236
Query: 2528 SKDVFVRHMRSLVGDQMLKMAVFKLQTQAARNSRTGPNQFPSQSQASVQQHHLKMQTIN- 2352
SKD FVRH+RS+VGDQMLK+AV K+Q+Q + P QASVQQ +M +I+
Sbjct: 237 SKDAFVRHIRSVVGDQMLKLAVMKVQSQPGPKHQLPP-------QASVQQQPPRMPSISV 289
Query: 2351 -GKQFPKPQSLAQLHQKGV--PEDPSHVPSTAAQLKSVSNNASIGNNAQKSQEVEXXXXX 2181
F P+S A LHQ+G P DPSH+PS+A Q +S S+++ I N+A+K +E E
Sbjct: 290 GSSPFTDPRSFA-LHQRGANPPTDPSHIPSSAVQAQSDSSHSVIENSAKKLREAERQSDS 348
Query: 2180 XXXXXXXXXXXXXSTLNQEKERCT-IPIXXXXXXXXXXXXXXXXXFPTYGNTGGNYPPFS 2004
NQE+ER P F YG+TGGNY P+S
Sbjct: 349 HGMQGSQMPSSSAVAGNQERERSAGPPQILNKQQQQQQLHYPQSSFAMYGSTGGNYHPYS 408
Query: 2003 GTNVNTSSTSLNQQPHDLQMRQVPVNQSTGASQS----VNVTSLPKFERQNSLSEQTRVQ 1836
T++NTS+ L QQPHD Q+RQ+P +Q G++QS VT++ K ERQNSL++ +R+Q
Sbjct: 409 ATSINTSTVPLKQQPHDSQLRQIPQHQGMGSTQSGGEPQGVTNVSKLERQNSLNDPSRLQ 468
Query: 1835 GGTLSHLTNNSALQQNSVHWQSSTGKVPKNGVPSSTTYVKQEPLDQLNEQQNKCQLSAPH 1656
GG++SH TNNS LQQNSV WQSS K G SS +YVKQEP+DQ EQQ K LS +
Sbjct: 469 GGSVSHFTNNSNLQQNSVPWQSSN-KEQNPGPVSSMSYVKQEPIDQTAEQQQKPPLS--N 525
Query: 1655 PQGLSAFSSAHIEQGNAIPGTSMGETFEMQSSRMGFXXXXXXXXXXXXXXXXXS------ 1494
QGL + S+A +EQG+A+PG S E+ E QSSRMGF S
Sbjct: 526 QQGLPSVSAAQLEQGSALPGISTDESLEKQSSRMGFATSGMVTSSSTGTVPPNSVSPSIM 585
Query: 1493 -QLDPNFLSSCRIVSSTSPIGPGSNGKAPTRKPYFGQKRPLEALGSSPPLSSKKQKVSGP 1317
Q+D N RI S TSP G + +AP +KP GQK+PLE GSSPP SSKKQK+SG
Sbjct: 586 TQVDTNVSLGHRIPSGTSPAG--ISNRAPPKKPSIGQKKPLEVPGSSPPPSSKKQKLSGN 643
Query: 1316 LSDQSIEQLNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRAVQEEEDRHFLQKRPLR 1137
DQSIEQLNDVTAVSGVNLREEEEQLFSG KEDSR SEASR+ VQEEE+R LQK PL+
Sbjct: 644 FLDQSIEQLNDVTAVSGVNLREEEEQLFSGPKEDSRASEASRKFVQEEEERLILQKAPLQ 703
Query: 1136 KKLAEI-MARCDVKSISNDVERCLSLCVEERMHGLISNLIRLSKQRVDIEKARHRALITS 960
KKLAEI + +C +KSISNDVERCLSLCVEERM GLI+NLIRLSKQRVD EK RH + TS
Sbjct: 704 KKLAEITVVKCGLKSISNDVERCLSLCVEERMRGLINNLIRLSKQRVDAEKPRHHTITTS 763
Query: 959 DVRQQIMLMNXXXXXXXXXXXXXXXXXXKLDEPEGNPGVDGDKEKDEGRVKSLKANKEDD 780
DVRQQ+M +N +L+EPE N GVDGDK+KD+GR KS K NKE+D
Sbjct: 764 DVRQQVMNLNQNAREEFEKKQAEAEKLRRLNEPEVNNGVDGDKDKDDGRSKSFKPNKEED 823
Query: 779 EKXXXXXXXXXXXXXXXXXXMLSKWQLMAEQARQKREGGIDVPSGSQPFNDVNHKPLSTF 600
+K MLSKWQLMAEQARQKREGGIDV SGSQP DVN KP ST
Sbjct: 824 DKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGIDVASGSQPGKDVNRKPTSTA 883
Query: 599 GR--NANQEAEKRGQSAAFATSGLSRKFGRNQVAVPQPVVVRKISIKDVIAVLEREPQMS 426
GR NQEAEKRG A SG RK GRNQV PQ V R IS+KDVIAVLEREPQMS
Sbjct: 884 GRIMKDNQEAEKRGGGTPVAASGTIRKCGRNQVITPQTRVARSISVKDVIAVLEREPQMS 943
Query: 425 KSTLIYQLHEKM 390
+ST+IY+L E++
Sbjct: 944 RSTMIYRLFERI 955
>ref|XP_008237948.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X3 [Prunus mume]
Length = 957
Score = 871 bits (2250), Expect = 0.0
Identities = 527/972 (54%), Positives = 619/972 (63%), Gaps = 22/972 (2%)
Frame = -1
Query: 3239 MDPSIMK-LLEEDEDETMHSGADVEAFTAALNRDIEGDTSNSQPSDSDGAALXXXXXXXX 3063
MDPSIMK LLE+DEDETMHSGADVEAF AALNRDIEGD S SQPSDSD +
Sbjct: 1 MDPSIMKKLLEDDEDETMHSGADVEAFQAALNRDIEGDMSVSQPSDSDSGS-----NNTS 55
Query: 3062 XQLFPQWQTSSQDENANCXXXXXXXXXXXXXXS--ELAPKQHASGYENQQPQIDTSQERN 2889
Q PQ+ T+SQDEN C E+ KQ+ S EN Q + D S E N
Sbjct: 56 SQSLPQFHTASQDENTACQTQHDQKIAQQREMHSYEMELKQYGSVAENIQQKKDASHEFN 115
Query: 2888 CFPLQEKQAQKDSQQWQAEAEQNTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNSESQY 2709
FPL +KQ Q D QQ QAE + H +T + S K P+ E D P SESQY
Sbjct: 116 QFPLPQKQPQGDLQQGQAEQKP----LHKPETAGIPISGKIPISKHEQDIPPTPESESQY 171
Query: 2708 SKLQKMSNQHPMASEQAINPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLKKNEI 2529
KLQKMS+Q M EQ NPM+ KQVPF LLLPV+ PQLDKDRAMQL TL+ KLK NEI
Sbjct: 172 LKLQKMSSQQAMIPEQPSNPMNRSKQVPFGLLLPVLLPQLDKDRAMQLTTLFGKLKNNEI 231
Query: 2528 SKDVFVRHMRSLVGDQMLKMAVFKLQTQAARNSRTGPNQFPSQSQASVQQHHLKMQTIN- 2352
SKD FVRH+RS+VGDQMLK+AV K+Q+Q + P QASVQQ +M +I+
Sbjct: 232 SKDAFVRHIRSVVGDQMLKLAVMKVQSQPGPKHQLPP-------QASVQQQPPRMPSISV 284
Query: 2351 -GKQFPKPQSLAQLHQKGV--PEDPSHVPSTAAQLKSVSNNASIGNNAQKSQEVEXXXXX 2181
F P+S A LHQ+G P DPSH+PS+A Q +S S+++ I N+A+K +E E
Sbjct: 285 GSSPFTDPRSFA-LHQRGANPPTDPSHIPSSAVQAQSDSSHSVIENSAKKLREAERQSDS 343
Query: 2180 XXXXXXXXXXXXXSTLNQEKERCT-IPIXXXXXXXXXXXXXXXXXFPTYGNTGGNYPPFS 2004
NQE+ER P F YG+TGGNY P+S
Sbjct: 344 HGMQGSQMPSSSAVAGNQERERSAGPPQILNKQQQQQQLHYPQSSFAMYGSTGGNYHPYS 403
Query: 2003 GTNVNTSSTSLNQQPHDLQMRQVPVNQSTGASQS----VNVTSLPKFERQNSLSEQTRVQ 1836
T++NTS+ L QQPHD Q+RQ+P +Q G++QS VT++ K ERQNSL++ +R+Q
Sbjct: 404 ATSINTSTVPLKQQPHDSQLRQIPQHQGMGSTQSGGEPQGVTNVSKLERQNSLNDPSRLQ 463
Query: 1835 GGTLSHLTNNSALQQNSVHWQSSTGKVPKNGVPSSTTYVKQEPLDQLNEQQNKCQLSAPH 1656
GG++SH TNNS LQQNSV WQSS K G SS +YVKQEP+DQ EQQ K LS +
Sbjct: 464 GGSVSHFTNNSNLQQNSVPWQSSN-KEQNPGPVSSMSYVKQEPIDQTAEQQQKPPLS--N 520
Query: 1655 PQGLSAFSSAHIEQGNAIPGTSMGETFEMQSSRMGFXXXXXXXXXXXXXXXXXS------ 1494
QGL + S+A +EQG+A+PG S E+ E QSSRMGF S
Sbjct: 521 QQGLPSVSAAQLEQGSALPGISTDESLEKQSSRMGFATSGMVTSSSTGTVPPNSVSPSIM 580
Query: 1493 -QLDPNFLSSCRIVSSTSPIGPGSNGKAPTRKPYFGQKRPLEALGSSPPLSSKKQKVSGP 1317
Q+D N RI S TSP G + +AP +KP GQK+PLE GSSPP SSKKQK+SG
Sbjct: 581 TQVDTNVSLGHRIPSGTSPAG--ISNRAPPKKPSIGQKKPLEVPGSSPPPSSKKQKLSGN 638
Query: 1316 LSDQSIEQLNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRAVQEEEDRHFLQKRPLR 1137
DQSIEQLNDVTAVSGVNLREEEEQLFSG KEDSR SEASR+ VQEEE+R LQK PL+
Sbjct: 639 FLDQSIEQLNDVTAVSGVNLREEEEQLFSGPKEDSRASEASRKFVQEEEERLILQKAPLQ 698
Query: 1136 KKLAEI-MARCDVKSISNDVERCLSLCVEERMHGLISNLIRLSKQRVDIEKARHRALITS 960
KKLAEI + +C +KSISNDVERCLSLCVEERM GLI+NLIRLSKQRVD EK RH + TS
Sbjct: 699 KKLAEITVVKCGLKSISNDVERCLSLCVEERMRGLINNLIRLSKQRVDAEKPRHHTITTS 758
Query: 959 DVRQQIMLMNXXXXXXXXXXXXXXXXXXKLDEPEGNPGVDGDKEKDEGRVKSLKANKEDD 780
DVRQQ+M +N +L+EPE N GVDGDK+KD+GR KS K NKE+D
Sbjct: 759 DVRQQVMNLNQNAREEFEKKQAEAEKLRRLNEPEVNNGVDGDKDKDDGRSKSFKPNKEED 818
Query: 779 EKXXXXXXXXXXXXXXXXXXMLSKWQLMAEQARQKREGGIDVPSGSQPFNDVNHKPLSTF 600
+K MLSKWQLMAEQARQKREGGIDV SGSQP DVN KP ST
Sbjct: 819 DKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGIDVASGSQPGKDVNRKPTSTA 878
Query: 599 GR--NANQEAEKRGQSAAFATSGLSRKFGRNQVAVPQPVVVRKISIKDVIAVLEREPQMS 426
GR NQEAEKRG A SG RK GRNQV PQ V R IS+KDVIAVLEREPQMS
Sbjct: 879 GRIMKDNQEAEKRGGGTPVAASGTIRKCGRNQVITPQTRVARSISVKDVIAVLEREPQMS 938
Query: 425 KSTLIYQLHEKM 390
+ST+IY+L E++
Sbjct: 939 RSTMIYRLFERI 950
>ref|XP_009372608.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X1 [Pyrus x bretschneideri]
Length = 965
Score = 868 bits (2243), Expect = 0.0
Identities = 529/974 (54%), Positives = 624/974 (64%), Gaps = 24/974 (2%)
Frame = -1
Query: 3239 MDPSIMK-LLEEDEDETMHSGADVEAFTAALNRDIEGDTSNSQPSDSDGAALXXXXXXXX 3063
MDPSIMK LLE+DEDETMHSGADVEAF AALNRDIEGD S SQPSDSD A L
Sbjct: 1 MDPSIMKKLLEDDEDETMHSGADVEAFQAALNRDIEGDASASQPSDSDSAILSQGSNNTS 60
Query: 3062 XQLFPQWQTSSQDENANCXXXXXXXXXXXXXXS--ELAPKQHASGYENQQPQIDTSQERN 2889
Q PQ+QT+ QDE+ C E+ KQ S EN Q + D SQE +
Sbjct: 61 SQPLPQFQTTGQDESTACEMQHDQKIAQPRELHSYEMELKQQGSVAENMQLKSDASQELS 120
Query: 2888 CFPLQEKQAQKDSQQWQAEAEQNTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNSESQY 2709
F L +KQ Q D QQ QAE Q +LQ H +T S K PV +E D T P SESQY
Sbjct: 121 HFSLSQKQPQGDLQQGQAE--QKSLQVH--ETTGTPISGKIPVSKQEQDITPTPQSESQY 176
Query: 2708 SKLQKMSNQHPMASEQAINPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLKKNEI 2529
KLQ+MS+Q M +EQ NPM+ KQVPF LLLPV+ PQLDKDRAMQL TL+ KLK NEI
Sbjct: 177 LKLQRMSSQQSMITEQPSNPMNRSKQVPFGLLLPVLLPQLDKDRAMQLNTLFGKLKNNEI 236
Query: 2528 SKDVFVRHMRSLVGDQMLKMAVFKLQTQAARNSRTGPNQFPSQSQASVQQHHLKMQTING 2349
SKD FVRH+RS+VGDQMLK+AV K+Q+Q + + GP QASVQQ +M + +
Sbjct: 237 SKDAFVRHIRSVVGDQMLKLAVMKVQSQHTKTLQPGPKH-QLLPQASVQQQSPRMPSASA 295
Query: 2348 --KQFPKPQSLAQLHQKGV--PEDPSHVPSTAAQLKSVSNNASIGNNAQKSQEVEXXXXX 2181
QF P+S A L+Q+G P DPSH+PS+ QL+S S+++ I N+A+K +E E
Sbjct: 296 GSTQFADPRSFA-LNQRGTNSPTDPSHIPSSTVQLQSDSSHSVIENSAKKLREAERQSDS 354
Query: 2180 XXXXXXXXXXXXXSTLNQEKERCTIPIXXXXXXXXXXXXXXXXXFPTYGNTGGNYPPFSG 2001
NQE+ER + P+ YG+TGGNY P++G
Sbjct: 355 HGMQVSQMSSSSVVAGNQERERSSGPMQILNKQQQQLQYPQSSYS-MYGSTGGNYHPYTG 413
Query: 2000 TNVNTSSTSLNQQPHDLQMRQVPVNQSTGASQSV------NVTSLPKFERQNSLSEQTRV 1839
T++NT L QQPHD Q+RQ+P +QS G++QS NV + ERQNS+ + +R+
Sbjct: 414 TSINT--LPLKQQPHDSQLRQIPQHQSMGSAQSGGEAKGGNVMGVSNLERQNSMKDPSRL 471
Query: 1838 QGGTLSHLTNNSALQQNSVHWQSSTGKVPKNGVPSSTTYVKQEPLDQLNEQQNKCQLSAP 1659
QGG+LSH TNNS LQQN WQSS K P +G SS +VKQE DQ EQQ+K LS
Sbjct: 472 QGGSLSHFTNNSTLQQNIAPWQSSN-KEPHSGPLSSIPFVKQELTDQTAEQQHKPPLS-- 528
Query: 1658 HPQGLSAFSSAHIEQGNAIPGTSMGETFEMQSSRMGFXXXXXXXXXXXXXXXXXS----- 1494
+ Q L S+A +EQGN PG SM E + QSSRMGF +
Sbjct: 529 NSQELP--SAAKLEQGNGSPGISMDEPLDKQSSRMGFPASVSIGASSSTSTVPPNSVSSS 586
Query: 1493 ---QLDPNFLSSCRIVSSTSPIGPGSNGKAPTRKPYFGQKRPLEALGSSPPLSSKKQKVS 1323
Q DPN L RI S TSP G + +AP +KP GQK+PLEALGSSPP SSKKQKVS
Sbjct: 587 ITTQADPNVLLGHRIPSGTSPAG--ISNRAPPKKPSVGQKKPLEALGSSPPPSSKKQKVS 644
Query: 1322 GPLSDQSIEQLNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRAVQEEEDRHFLQKRP 1143
G DQSIEQLNDVTAVSGVNLREEEEQLFSG KEDSR SEASR+ VQEEE+R LQK P
Sbjct: 645 GTFLDQSIEQLNDVTAVSGVNLREEEEQLFSGPKEDSRASEASRKFVQEEEERLILQKEP 704
Query: 1142 LRKKLAEIMARCDVKSISNDVERCLSLCVEERMHGLISNLIRLSKQRVDIEKARHRALIT 963
L+KKLAEIM +C +KS+SNDVERCLSLCVEERM GLI+NLIRLSKQRVD EK RHR +IT
Sbjct: 705 LQKKLAEIMIKCGLKSVSNDVERCLSLCVEERMRGLINNLIRLSKQRVDAEKPRHRTIIT 764
Query: 962 SDVRQQIMLMNXXXXXXXXXXXXXXXXXXKLDEPEGNPGVDGDKEKDEGRVKSLKANKED 783
SDVRQQ+M +N KL+EPE + GVDGDK+KDEGR KS K NKE+
Sbjct: 765 SDVRQQVMNLNQNAREEFEKKQAEAEKLRKLNEPEVSNGVDGDKDKDEGRSKSFKPNKEE 824
Query: 782 DEKXXXXXXXXXXXXXXXXXXMLSKWQLMAEQARQKREGGIDVPSGSQPFNDVNHKPLST 603
D+K MLSKWQLMAEQARQKREGGIDV SGSQP DVN KP +
Sbjct: 825 DDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGIDVASGSQPGKDVNRKPTLS 884
Query: 602 FGRNA--NQEAEKR-GQSAAFATSGLSRKFGRNQVAVPQPVVVRKISIKDVIAVLEREPQ 432
GR NQEAEKR G + + +G RK G+NQV VPQ V R IS+KDVIAVLEREPQ
Sbjct: 885 AGRTMKDNQEAEKRSGGTPVASAAGTIRKCGKNQVNVPQTKVARSISVKDVIAVLEREPQ 944
Query: 431 MSKSTLIYQLHEKM 390
MS+STLIY+L E++
Sbjct: 945 MSRSTLIYRLFERV 958
>emb|CDP01217.1| unnamed protein product [Coffea canephora]
Length = 922
Score = 866 bits (2238), Expect = 0.0
Identities = 515/963 (53%), Positives = 610/963 (63%), Gaps = 13/963 (1%)
Frame = -1
Query: 3239 MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIEGDTSNSQPSDSDGAALXXXXXXXXX 3060
MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIEGD S SQPSDSD AL
Sbjct: 1 MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIEGDISTSQPSDSDSNALSQGSSHASS 60
Query: 3059 QLFPQWQTSSQDENANCXXXXXXXXXXXXXXS--ELAPKQHASGYENQQPQIDTSQERNC 2886
Q PQWQTS+ D+NAN E+ KQ +ENQ+ Q +T QE
Sbjct: 61 QFLPQWQTSNHDDNANSLSQQDPLGSQKSEPLSAEMDVKQPGLVHENQKQQDNTMQEEI- 119
Query: 2885 FPLQEKQAQKDSQQWQAEAEQNTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNSESQYS 2706
Q + E+ H +Q + +QK+ + +Q +
Sbjct: 120 ----NMQDAYTNVVHNTGPERTQNPDHDAQLVILQKANN--------QQASFSAMSNQQA 167
Query: 2705 KLQKMSNQHPMA----SEQAINPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLKK 2538
+ M+NQ P A ++QA N ++ GKQVPFALLLPVIQPQLDKDRAMQL TLY+KL+K
Sbjct: 168 VVSTMTNQQPKAPGTSNQQASNALNRGKQVPFALLLPVIQPQLDKDRAMQLNTLYLKLRK 227
Query: 2537 NEISKDVFVRHMRSLVGDQMLKMAVFKLQTQAARNSRTGPNQFPSQSQASVQQHHLKMQT 2358
NEISKD FVRHMRS+VGDQMLKMAV+KLQ+QAARN++ P+Q PSQSQ S QQ +L
Sbjct: 228 NEISKDGFVRHMRSIVGDQMLKMAVYKLQSQAARNTQNVPSQVPSQSQVSTQQQNL---- 283
Query: 2357 INGKQFPKPQSLAQLHQKGVPEDPSHVPSTAAQLKSVSNNASIGNNAQKSQEVEXXXXXX 2178
P S ST A +N S +NAQK +EVE
Sbjct: 284 --------PTS-----------------STVAMTTDSTNKVS-DSNAQKPREVERLPDSH 317
Query: 2177 XXXXXXXXXXXXSTLNQEKERCTIPIXXXXXXXXXXXXXXXXXFPTYGNTGGNYPPFSGT 1998
+ NQ+KER P FPTYGNTG + P+S
Sbjct: 318 GVPLSQMSTASLAA-NQDKERSAFPPQGINKQHPQHMHFSHPSFPTYGNTGSIHRPYSTM 376
Query: 1997 NVNTSSTSLNQQPHDLQMRQVPVNQSTGASQ------SVNVTSLPKFERQNSLSEQTRVQ 1836
N NTS T L Q PHD QMR +P +Q+ A+Q +N+ S+ KF+ QNS ++ R+Q
Sbjct: 377 NTNTS-TPLKQLPHDSQMRPIPAHQTMNATQLGTTTQGMNMVSVTKFDGQNSFNDPKRLQ 435
Query: 1835 GGTLSHLTNNSALQQNSVHWQSSTGKVPKNGVPSSTTYVKQEPLDQLNEQQNKCQLSAPH 1656
G+L+ TN+ L QNSV WQS + K K+G+PSSTT+VK EPLDQ NEQ K Q SA
Sbjct: 436 SGSLTPATNSPVLPQNSVQWQSLSAKEQKSGIPSSTTFVKPEPLDQSNEQY-KSQFSAT- 493
Query: 1655 PQGLSAFSSAHIEQGNAIPGTSMGETFEMQSSRMGFXXXXXXXXXXXXXXXXXSQLDPNF 1476
QGLS+F S ++EQGN +PGT E+FEMQSSR+GF SQ++PN
Sbjct: 494 -QGLSSFPSTNVEQGNTLPGTLKDESFEMQSSRLGFSAPTSTVPTNPMLSSMPSQMEPNN 552
Query: 1475 LSSCRIVSSTSP-IGPGSNGKAPTRKPYFGQKRPLEALGSSPPLSSKKQKVSGPLSDQSI 1299
+ R+ SSTS +G G++ KAP +KP GQK+P EALGSSPP SSKKQKVSG DQSI
Sbjct: 553 TLNSRMHSSTSASMGIGTSSKAPAKKPSIGQKKPQEALGSSPPPSSKKQKVSGAFLDQSI 612
Query: 1298 EQLNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRAVQEEEDRHFLQKRPLRKKLAEI 1119
EQLNDVTAVSGVNLREEEEQLFSG KEDSRVSEASRR VQEEEDR L+K PL++KLAEI
Sbjct: 613 EQLNDVTAVSGVNLREEEEQLFSGPKEDSRVSEASRRVVQEEEDRLILEKIPLKRKLAEI 672
Query: 1118 MARCDVKSISNDVERCLSLCVEERMHGLISNLIRLSKQRVDIEKARHRALITSDVRQQIM 939
MA+C +K ISNDVERCLSLCVEERM GL+ NLIRLSKQR+DIEK+RH+ ++TSDVRQQIM
Sbjct: 673 MAKCGLKGISNDVERCLSLCVEERMRGLVGNLIRLSKQRLDIEKSRHKTVVTSDVRQQIM 732
Query: 938 LMNXXXXXXXXXXXXXXXXXXKLDEPEGNPGVDGDKEKDEGRVKSLKANKEDDEKXXXXX 759
L+N KL+EPE NPGVDG+KEKDEGRVK +KANKE+D+K
Sbjct: 733 LINRKAREEWEKKQAEVEKQQKLNEPESNPGVDGEKEKDEGRVKPVKANKEEDDKMRTTA 792
Query: 758 XXXXXXXXXXXXXMLSKWQLMAEQARQKREGGIDVPSGSQPFNDVNHKPLSTFGRNANQE 579
MLSKWQLMAEQARQKREGGID SGSQP D K S NQE
Sbjct: 793 ANVAARAAVGGDDMLSKWQLMAEQARQKREGGIDAASGSQPGKDTGRKLSSGRSSRDNQE 852
Query: 578 AEKRGQSAAFATSGLSRKFGRNQVAVPQPVVVRKISIKDVIAVLEREPQMSKSTLIYQLH 399
EKRGQSAA +T G +RK GRNQV V QP V R IS+KDVIAVLEREPQMSKSTL+Y+L+
Sbjct: 853 VEKRGQSAANSTPGAARKVGRNQVVVTQPKVARTISVKDVIAVLEREPQMSKSTLMYRLY 912
Query: 398 EKM 390
E++
Sbjct: 913 ERI 915
>ref|XP_009372609.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X2 [Pyrus x bretschneideri]
Length = 959
Score = 863 bits (2231), Expect = 0.0
Identities = 528/974 (54%), Positives = 622/974 (63%), Gaps = 24/974 (2%)
Frame = -1
Query: 3239 MDPSIMK-LLEEDEDETMHSGADVEAFTAALNRDIEGDTSNSQPSDSDGAALXXXXXXXX 3063
MDPSIMK LLE+DEDETMHSGADVEAF AALNRDIEGD S SQPSDSD A L
Sbjct: 1 MDPSIMKKLLEDDEDETMHSGADVEAFQAALNRDIEGDASASQPSDSDSAILSQGSNNTS 60
Query: 3062 XQLFPQWQTSSQDENANCXXXXXXXXXXXXXXS--ELAPKQHASGYENQQPQIDTSQERN 2889
Q PQ+QT+ QDE+ C E+ KQ S EN Q + D SQE +
Sbjct: 61 SQPLPQFQTTGQDESTACEMQHDQKIAQPRELHSYEMELKQQGSVAENMQLKSDASQELS 120
Query: 2888 CFPLQEKQAQKDSQQWQAEAEQNTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNSESQY 2709
F L +KQ Q D QQ QAE Q +LQ H +T S K PV +E D T P SESQY
Sbjct: 121 HFSLSQKQPQGDLQQGQAE--QKSLQVH--ETTGTPISGKIPVSKQEQDITPTPQSESQY 176
Query: 2708 SKLQKMSNQHPMASEQAINPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLKKNEI 2529
KLQ+MS+Q M +EQ NPM+ KQVPF LLLPV+ PQLDKDRAMQL TL+ KLK NEI
Sbjct: 177 LKLQRMSSQQSMITEQPSNPMNRSKQVPFGLLLPVLLPQLDKDRAMQLNTLFGKLKNNEI 236
Query: 2528 SKDVFVRHMRSLVGDQMLKMAVFKLQTQAARNSRTGPNQFPSQSQASVQQHHLKMQTING 2349
SKD FVRH+RS+VGDQMLK+AV K+Q+Q + P QASVQQ +M + +
Sbjct: 237 SKDAFVRHIRSVVGDQMLKLAVMKVQSQPGPKHQLLP-------QASVQQQSPRMPSASA 289
Query: 2348 --KQFPKPQSLAQLHQKGV--PEDPSHVPSTAAQLKSVSNNASIGNNAQKSQEVEXXXXX 2181
QF P+S A L+Q+G P DPSH+PS+ QL+S S+++ I N+A+K +E E
Sbjct: 290 GSTQFADPRSFA-LNQRGTNSPTDPSHIPSSTVQLQSDSSHSVIENSAKKLREAERQSDS 348
Query: 2180 XXXXXXXXXXXXXSTLNQEKERCTIPIXXXXXXXXXXXXXXXXXFPTYGNTGGNYPPFSG 2001
NQE+ER + P+ YG+TGGNY P++G
Sbjct: 349 HGMQVSQMSSSSVVAGNQERERSSGPMQILNKQQQQLQYPQSSYS-MYGSTGGNYHPYTG 407
Query: 2000 TNVNTSSTSLNQQPHDLQMRQVPVNQSTGASQSV------NVTSLPKFERQNSLSEQTRV 1839
T++NT L QQPHD Q+RQ+P +QS G++QS NV + ERQNS+ + +R+
Sbjct: 408 TSINT--LPLKQQPHDSQLRQIPQHQSMGSAQSGGEAKGGNVMGVSNLERQNSMKDPSRL 465
Query: 1838 QGGTLSHLTNNSALQQNSVHWQSSTGKVPKNGVPSSTTYVKQEPLDQLNEQQNKCQLSAP 1659
QGG+LSH TNNS LQQN WQSS K P +G SS +VKQE DQ EQQ+K LS
Sbjct: 466 QGGSLSHFTNNSTLQQNIAPWQSSN-KEPHSGPLSSIPFVKQELTDQTAEQQHKPPLS-- 522
Query: 1658 HPQGLSAFSSAHIEQGNAIPGTSMGETFEMQSSRMGFXXXXXXXXXXXXXXXXXS----- 1494
+ Q L S+A +EQGN PG SM E + QSSRMGF +
Sbjct: 523 NSQELP--SAAKLEQGNGSPGISMDEPLDKQSSRMGFPASVSIGASSSTSTVPPNSVSSS 580
Query: 1493 ---QLDPNFLSSCRIVSSTSPIGPGSNGKAPTRKPYFGQKRPLEALGSSPPLSSKKQKVS 1323
Q DPN L RI S TSP G + +AP +KP GQK+PLEALGSSPP SSKKQKVS
Sbjct: 581 ITTQADPNVLLGHRIPSGTSPAG--ISNRAPPKKPSVGQKKPLEALGSSPPPSSKKQKVS 638
Query: 1322 GPLSDQSIEQLNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRAVQEEEDRHFLQKRP 1143
G DQSIEQLNDVTAVSGVNLREEEEQLFSG KEDSR SEASR+ VQEEE+R LQK P
Sbjct: 639 GTFLDQSIEQLNDVTAVSGVNLREEEEQLFSGPKEDSRASEASRKFVQEEEERLILQKEP 698
Query: 1142 LRKKLAEIMARCDVKSISNDVERCLSLCVEERMHGLISNLIRLSKQRVDIEKARHRALIT 963
L+KKLAEIM +C +KS+SNDVERCLSLCVEERM GLI+NLIRLSKQRVD EK RHR +IT
Sbjct: 699 LQKKLAEIMIKCGLKSVSNDVERCLSLCVEERMRGLINNLIRLSKQRVDAEKPRHRTIIT 758
Query: 962 SDVRQQIMLMNXXXXXXXXXXXXXXXXXXKLDEPEGNPGVDGDKEKDEGRVKSLKANKED 783
SDVRQQ+M +N KL+EPE + GVDGDK+KDEGR KS K NKE+
Sbjct: 759 SDVRQQVMNLNQNAREEFEKKQAEAEKLRKLNEPEVSNGVDGDKDKDEGRSKSFKPNKEE 818
Query: 782 DEKXXXXXXXXXXXXXXXXXXMLSKWQLMAEQARQKREGGIDVPSGSQPFNDVNHKPLST 603
D+K MLSKWQLMAEQARQKREGGIDV SGSQP DVN KP +
Sbjct: 819 DDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGIDVASGSQPGKDVNRKPTLS 878
Query: 602 FGRNA--NQEAEKR-GQSAAFATSGLSRKFGRNQVAVPQPVVVRKISIKDVIAVLEREPQ 432
GR NQEAEKR G + + +G RK G+NQV VPQ V R IS+KDVIAVLEREPQ
Sbjct: 879 AGRTMKDNQEAEKRSGGTPVASAAGTIRKCGKNQVNVPQTKVARSISVKDVIAVLEREPQ 938
Query: 431 MSKSTLIYQLHEKM 390
MS+STLIY+L E++
Sbjct: 939 MSRSTLIYRLFERV 952
>ref|XP_006433616.1| hypothetical protein CICLE_v10000177mg [Citrus clementina]
gi|557535738|gb|ESR46856.1| hypothetical protein
CICLE_v10000177mg [Citrus clementina]
Length = 954
Score = 862 bits (2227), Expect = 0.0
Identities = 510/967 (52%), Positives = 621/967 (64%), Gaps = 17/967 (1%)
Frame = -1
Query: 3239 MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIEGDTSNSQPSDSDGAALXXXXXXXXX 3060
MDPSIMKLLEEDEDE+MHSGADV+AF AALNRDI GD S SQPSDS+ A +
Sbjct: 1 MDPSIMKLLEEDEDESMHSGADVDAFQAALNRDIGGDVSTSQPSDSESALVQGNDSSNTL 60
Query: 3059 QL-FPQWQTSSQDENAN--CXXXXXXXXXXXXXXSELAPKQHASGYENQQPQID---TSQ 2898
QWQ +SQDEN N ++ KQH S ENQQ Q + S+
Sbjct: 61 SQPMAQWQNASQDENTNFHSQQGPESARLQEQHLQQMELKQHGSVAENQQQQQNESSVSE 120
Query: 2897 ERNCFPLQEKQAQKDSQQWQAEAEQNTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNSE 2718
E N PLQ+KQ+Q D QQ QAE + TL S SQT +Q SEK PV + P+ TQ
Sbjct: 121 EDNRNPLQQKQSQDDRQQGQAE--EKTL-SQISQTTGIQISEKNPVAMHVPERTQNQVGG 177
Query: 2717 SQYSKLQKMSNQHPMASEQAINPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLKK 2538
QY K+QKMSNQ + +EQ NPM+ GKQVPFALLLP + P LDKDRAMQL TLY KLKK
Sbjct: 178 PQYPKMQKMSNQQAVGAEQPGNPMNRGKQVPFALLLPALVPHLDKDRAMQLHTLYGKLKK 237
Query: 2537 NEISKDVFVRHMRSLVGDQMLKMAVFKLQTQAARNSRTGPNQFPSQSQASVQQHHLKMQT 2358
NEI KDVFVRHMR +VGDQML++AV K+Q+Q G +QFPSQSQAS +Q L+M +
Sbjct: 238 NEIVKDVFVRHMRDIVGDQMLRLAVNKMQSQM------GSHQFPSQSQASARQQQLRMPS 291
Query: 2357 ING--KQFPKPQSLAQLHQKG-VPEDPSHVPSTAAQLKSVSNNASIGNNAQKSQEVEXXX 2187
+ QF S AQ++QK P DP H P+++A ++ S+ N+AQKS+E+E
Sbjct: 292 ASAAASQFSDTHSFAQVNQKSNSPTDPIHGPASSAHVQVGSSYPIKENSAQKSRELEHQS 351
Query: 2186 XXXXXXXXXXXXXXXSTLNQEKERCTIPIXXXXXXXXXXXXXXXXXFPTYGNTGGNYPPF 2007
ST+NQE+ER ++ + F YG+ +Y P+
Sbjct: 352 ASHGIHGSQISSSTPSTVNQERERSSV-VQGLNKQQQQHLHFPQTSFSMYGSGSNSYHPY 410
Query: 2006 SGTNVNTSSTSLNQQPHDLQMRQVPVNQSTG------ASQSVNVTSLPKFERQNSLSEQT 1845
SGTNVN +SL QPHD MRQ+ +QS G ASQ +NV ++PKFE+QN++++
Sbjct: 411 SGTNVNNPGSSLKPQPHDSAMRQITHHQSMGSTPLGGASQPMNVMNVPKFEKQNNMNDPG 470
Query: 1844 RVQGGTLSHLTNNSALQQNSVHWQSSTGKVPKNGVPSSTTYVKQEPLDQLNEQQNKCQLS 1665
+VQGG++S T+NS LQQ+SV WQ+S K +G S YVK EP+DQ +Q K S
Sbjct: 471 KVQGGSISQFTSNSTLQQSSVPWQASANKEQSSGSLPSMAYVKPEPIDQGTDQPYKLHSS 530
Query: 1664 APHPQGLSAFSSAHIEQGNAIPGTSMGETFEMQSSRMGFXXXXXXXXXXXXXXXXXSQLD 1485
P FS A +E G+ +PGT E E QS RMGF + LD
Sbjct: 531 TPQ-----GFSVAQVEPGSTVPGTLKDEASEKQSPRMGFSASTSIVPSNSVSPSTTTLLD 585
Query: 1484 PNFLSSCRIVSSTSPIGPGSNGKAPTRKPYFGQKRPLEALGSSPPLSSKKQKVSGPLSDQ 1305
N LSS R+ + TSP G N + P +KP QK+P+E GSSPP+ SKKQKVSG SDQ
Sbjct: 586 SNALSS-RMPAVTSPAGV--NARTPPKKPSVSQKKPVEPPGSSPPMPSKKQKVSGAFSDQ 642
Query: 1304 SIEQLNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRAVQEEEDRHFLQKRPLRKKLA 1125
SIEQLNDVTAVSGVNLREEEEQLFSG+KEDSRVSEASRR VQEEE+R LQK PL+KKLA
Sbjct: 643 SIEQLNDVTAVSGVNLREEEEQLFSGTKEDSRVSEASRRVVQEEEERLILQKNPLQKKLA 702
Query: 1124 EIMARCDVKSISNDVERCLSLCVEERMHGLISNLIRLSKQRVDIEKARHRALITSDVRQQ 945
EIM +C +K++SNDVERCLSLCVEERM GL+ NLIRLSKQRVD EK RHR +ITSD+RQQ
Sbjct: 703 EIMVKCGLKNMSNDVERCLSLCVEERMRGLLCNLIRLSKQRVDAEKIRHRTVITSDIRQQ 762
Query: 944 IMLMNXXXXXXXXXXXXXXXXXXKLDEPEGNPGVDGDKEKDEGRVKSLKANKEDDEKXXX 765
IMLMN K++EP+G+ G+DG+KEKD+GR+KS+K NKE+D+K
Sbjct: 763 IMLMNRKAKEEWEKKQAEAEKLRKVNEPDGDSGIDGEKEKDDGRIKSVKVNKEEDDKMRT 822
Query: 764 XXXXXXXXXXXXXXXMLSKWQLMAEQARQKREGGIDVPSGSQPFNDVNHKPLSTFGRNA- 588
M SKWQLMAEQARQKREGG D+ SGSQ D N +PL T GRN
Sbjct: 823 TAANVAARAAVGGDDMFSKWQLMAEQARQKREGGTDMASGSQAGKDTNRRPL-TSGRNTK 881
Query: 587 -NQEAEKRGQSAAFATSGLSRKFGRNQVAVPQPVVVRKISIKDVIAVLEREPQMSKSTLI 411
NQ+AEKRGQ+ A SG RKFG+ Q V Q V R I++KDVIAVLEREPQMSKSTLI
Sbjct: 882 DNQDAEKRGQTTPSA-SGSGRKFGKTQATVSQTKVARAITVKDVIAVLEREPQMSKSTLI 940
Query: 410 YQLHEKM 390
Y+L+EK+
Sbjct: 941 YRLYEKV 947
>gb|KDO81553.1| hypothetical protein CISIN_1g048675mg [Citrus sinensis]
Length = 954
Score = 862 bits (2226), Expect = 0.0
Identities = 510/967 (52%), Positives = 622/967 (64%), Gaps = 17/967 (1%)
Frame = -1
Query: 3239 MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIEGDTSNSQPSDSDGAALXXXXXXXXX 3060
MDPSIMKLLEEDEDE+MHSGADV+AF AALNRDI GD S SQPSDS+ A +
Sbjct: 1 MDPSIMKLLEEDEDESMHSGADVDAFQAALNRDIGGDVSTSQPSDSESALVQGNDSSNTL 60
Query: 3059 QL-FPQWQTSSQDENAN--CXXXXXXXXXXXXXXSELAPKQHASGYENQQPQID---TSQ 2898
QWQ +SQDEN N ++ KQH S ENQQ Q + S+
Sbjct: 61 SQPMAQWQNASQDENTNFHSQQGPESARLQEQHLQQMELKQHGSVAENQQQQQNESSVSE 120
Query: 2897 ERNCFPLQEKQAQKDSQQWQAEAEQNTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNSE 2718
E N PLQ+KQ+Q D QQ QAE + TL S SQT +Q SEK PV + P+ TQ
Sbjct: 121 EDNRNPLQQKQSQDDRQQGQAE--EKTL-SQISQTTGIQISEKNPVAMHVPERTQNQVGG 177
Query: 2717 SQYSKLQKMSNQHPMASEQAINPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLKK 2538
QY K+QKMSNQ + +EQ NPM+ GKQVPFALLLP + P LDKDRAMQL TLY KLKK
Sbjct: 178 PQYPKMQKMSNQQAVGAEQPGNPMNRGKQVPFALLLPALVPHLDKDRAMQLHTLYGKLKK 237
Query: 2537 NEISKDVFVRHMRSLVGDQMLKMAVFKLQTQAARNSRTGPNQFPSQSQASVQQHHLKMQT 2358
NEI KDVFVRHMR +VGDQML++AV K+Q+Q G +QFPSQSQAS +Q L+M +
Sbjct: 238 NEIVKDVFVRHMRDIVGDQMLRLAVNKMQSQM------GSHQFPSQSQASARQQQLRMPS 291
Query: 2357 ING--KQFPKPQSLAQLHQKG-VPEDPSHVPSTAAQLKSVSNNASIGNNAQKSQEVEXXX 2187
+ QF S AQ++QK P DP H P+++A ++ S+ N+AQKS+E+E
Sbjct: 292 ASAAASQFSDTHSFAQVNQKSNSPTDPIHGPASSAHVQVGSSYPIKENSAQKSRELEHQS 351
Query: 2186 XXXXXXXXXXXXXXXSTLNQEKERCTIPIXXXXXXXXXXXXXXXXXFPTYGNTGGNYPPF 2007
ST+NQE+ER ++ + F YG+ +Y P+
Sbjct: 352 ASHGIHGSQISSSTPSTVNQERERSSV-VQGLNKQQQQHLHFPQTSFSMYGSGSNSYHPY 410
Query: 2006 SGTNVNTSSTSLNQQPHDLQMRQVPVNQSTG------ASQSVNVTSLPKFERQNSLSEQT 1845
SGTNVN +SL QPHD MRQ+ +QS G ASQ +NV ++PKFE+QN++++
Sbjct: 411 SGTNVNNPGSSLKPQPHDSAMRQITHHQSMGSTPLGGASQPMNVMNVPKFEKQNNMNDPG 470
Query: 1844 RVQGGTLSHLTNNSALQQNSVHWQSSTGKVPKNGVPSSTTYVKQEPLDQLNEQQNKCQLS 1665
+VQGG++S T+NS LQQ+SV WQ+S K +G S YVK EP+DQ +Q K S
Sbjct: 471 KVQGGSISQFTSNSTLQQSSVPWQASANKEQSSGSLPSMAYVKPEPIDQGTDQPYKLHSS 530
Query: 1664 APHPQGLSAFSSAHIEQGNAIPGTSMGETFEMQSSRMGFXXXXXXXXXXXXXXXXXSQLD 1485
P FS A +E G+ +PGT E E QS RMGF + LD
Sbjct: 531 TPQ-----GFSVAQVEPGSTVPGTLKDEASEKQSPRMGFSASTSIVPSNSVSPSTTTLLD 585
Query: 1484 PNFLSSCRIVSSTSPIGPGSNGKAPTRKPYFGQKRPLEALGSSPPLSSKKQKVSGPLSDQ 1305
N LSS R+ + TSP G N + P +KP QK+P+E GSSPP+ SKKQKVSG SDQ
Sbjct: 586 SNALSS-RMPAVTSPAGV--NARTPPKKPSVSQKKPVEPPGSSPPMPSKKQKVSGAFSDQ 642
Query: 1304 SIEQLNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRAVQEEEDRHFLQKRPLRKKLA 1125
SIEQLNDVTAVSGVNLREEEEQLFSG+KEDSRVSEASRR VQEEE+R LQK PL+KKLA
Sbjct: 643 SIEQLNDVTAVSGVNLREEEEQLFSGTKEDSRVSEASRRVVQEEEERLILQKNPLQKKLA 702
Query: 1124 EIMARCDVKSISNDVERCLSLCVEERMHGLISNLIRLSKQRVDIEKARHRALITSDVRQQ 945
EIM +C +K++SNDVERCLSLCVEERM GL+ NLIRLSKQRVD EK RHR +ITSD+RQQ
Sbjct: 703 EIMVKCGLKNMSNDVERCLSLCVEERMRGLLCNLIRLSKQRVDAEKIRHRTVITSDIRQQ 762
Query: 944 IMLMNXXXXXXXXXXXXXXXXXXKLDEPEGNPGVDGDKEKDEGRVKSLKANKEDDEKXXX 765
IMLMN K++EP+G+ G+DG+KEKD+GR+KS+K NKE+D+K
Sbjct: 763 IMLMNRKAKEEWEKKQAEAEKLRKVNEPDGDSGIDGEKEKDDGRIKSVKVNKEEDDKMRT 822
Query: 764 XXXXXXXXXXXXXXXMLSKWQLMAEQARQKREGGIDVPSGSQPFNDVNHKPLSTFGRNA- 588
MLSKWQLMAEQARQKREGG D+ SGSQ D + +PL T GRN
Sbjct: 823 TAANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDMASGSQAGKDTSRRPL-TSGRNTK 881
Query: 587 -NQEAEKRGQSAAFATSGLSRKFGRNQVAVPQPVVVRKISIKDVIAVLEREPQMSKSTLI 411
NQ+AEKRGQ+ A SG RKFG+ Q V Q V R I++KDVIAVLEREPQMSKSTLI
Sbjct: 882 DNQDAEKRGQTTPSA-SGSGRKFGKTQATVSQTKVARAITVKDVIAVLEREPQMSKSTLI 940
Query: 410 YQLHEKM 390
Y+L+EK+
Sbjct: 941 YRLYEKV 947
>ref|XP_006472283.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
[Citrus sinensis]
Length = 955
Score = 860 bits (2221), Expect = 0.0
Identities = 507/967 (52%), Positives = 620/967 (64%), Gaps = 17/967 (1%)
Frame = -1
Query: 3239 MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIEGDTSNSQPSDSDGAALXXXXXXXXX 3060
MDPSIMKLLEEDEDE+MHSGADV+AF AALNRDI GD S SQPSDS+ A +
Sbjct: 1 MDPSIMKLLEEDEDESMHSGADVDAFQAALNRDIGGDVSTSQPSDSESALVQGNDSSNTL 60
Query: 3059 QL-FPQWQTSSQDENAN--CXXXXXXXXXXXXXXSELAPKQHASGYENQQPQID---TSQ 2898
QWQ +SQDEN N ++ KQH S ENQQ Q + S+
Sbjct: 61 SQPMAQWQNASQDENTNFHSQQGPESARLQEQHLQQMELKQHGSVAENQQQQQNESSVSE 120
Query: 2897 ERNCFPLQEKQAQKDSQQWQAEAEQNTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNSE 2718
E N PLQ+KQ+Q D QQ QAE + S SQT +Q SEK PV + P+ TQ
Sbjct: 121 EDNRNPLQQKQSQDDRQQGQAEEKT---PSQVSQTTGIQISEKNPVAMHVPERTQNQVGG 177
Query: 2717 SQYSKLQKMSNQHPMASEQAINPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLKK 2538
QY K+QKMSNQ + +EQ NPM+ GKQVPFALLLP + P LDKDRAMQL TLY KLKK
Sbjct: 178 PQYPKMQKMSNQQAVGAEQPGNPMNRGKQVPFALLLPALVPHLDKDRAMQLHTLYGKLKK 237
Query: 2537 NEISKDVFVRHMRSLVGDQMLKMAVFKLQTQAARNSRTGPNQFPSQSQASVQQHHLKMQT 2358
NEI KDVFVRHMR +VGDQML++AV K+Q+Q G +QFPSQSQAS +Q L+M +
Sbjct: 238 NEIVKDVFVRHMRDIVGDQMLRLAVNKMQSQM------GSHQFPSQSQASARQQQLRMPS 291
Query: 2357 ING--KQFPKPQSLAQLHQKG-VPEDPSHVPSTAAQLKSVSNNASIGNNAQKSQEVEXXX 2187
+ QF S AQ++QK P DP H P+++A ++ S+ N+AQKS+E+E
Sbjct: 292 ASAAASQFSDTHSFAQVNQKSNSPADPIHGPASSAHVQVGSSYPIKENSAQKSRELEHQS 351
Query: 2186 XXXXXXXXXXXXXXXSTLNQEKERCTIPIXXXXXXXXXXXXXXXXXFPTYGNTGGNYPPF 2007
ST+NQE+ER ++ + F YG+ +Y P+
Sbjct: 352 ASHGIHGSQISSSTPSTVNQERERSSV-VQGLNKQQQQHLHFPQTSFSMYGSGSNSYHPY 410
Query: 2006 SGTNVNTSSTSLNQQPHDLQMRQVPVNQSTG------ASQSVNVTSLPKFERQNSLSEQT 1845
SGTNVN +SL QPHD MRQ+ +QS G ASQ +NV ++PKFE+QN++++
Sbjct: 411 SGTNVNNPGSSLKPQPHDSAMRQITHHQSMGSTPLGGASQPMNVMNVPKFEKQNNMNDPG 470
Query: 1844 RVQGGTLSHLTNNSALQQNSVHWQSSTGKVPKNGVPSSTTYVKQEPLDQLNEQQNKCQLS 1665
++QGG++S T+NS LQQ+SV WQ+S K +G S YVK EP+DQ +Q K S
Sbjct: 471 KMQGGSISQFTSNSTLQQSSVPWQASANKEQSSGSLPSMAYVKPEPIDQGTDQPYKLHSS 530
Query: 1664 APHPQGLSAFSSAHIEQGNAIPGTSMGETFEMQSSRMGFXXXXXXXXXXXXXXXXXSQLD 1485
P FS A +E G+ +PGT E E QS RMGF + LD
Sbjct: 531 TPQ-----GFSVAQVEPGSTVPGTLKDEASEKQSPRMGFSASTSIVPSNSVSPSTTTLLD 585
Query: 1484 PNFLSSCRIVSSTSPIGPGSNGKAPTRKPYFGQKRPLEALGSSPPLSSKKQKVSGPLSDQ 1305
N LSS R+ + TSP G N + P +KP QK+P+E GSSPP+ SKKQKVSG SDQ
Sbjct: 586 SNALSS-RMPAVTSPAGV--NARTPPKKPSVSQKKPVEPPGSSPPMPSKKQKVSGAFSDQ 642
Query: 1304 SIEQLNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRAVQEEEDRHFLQKRPLRKKLA 1125
SIEQLNDVTAVSGVNLREEEEQLFSG+KEDSRVSEASRR VQEEE+R LQK PL+KKLA
Sbjct: 643 SIEQLNDVTAVSGVNLREEEEQLFSGTKEDSRVSEASRRVVQEEEERLILQKNPLQKKLA 702
Query: 1124 EIMARCDVKSISNDVERCLSLCVEERMHGLISNLIRLSKQRVDIEKARHRALITSDVRQQ 945
EIM +C +K++SNDVERCLSLCVEERM GL+ NLIRLSKQRVD EK RHR +ITSD+RQQ
Sbjct: 703 EIMVKCGLKNMSNDVERCLSLCVEERMRGLLCNLIRLSKQRVDAEKIRHRTVITSDIRQQ 762
Query: 944 IMLMNXXXXXXXXXXXXXXXXXXKLDEPEGNPGVDGDKEKDEGRVKSLKANKEDDEKXXX 765
IMLMN K++EP+G+ G+DG+KEKD+GR+KS+K NKE+D+K
Sbjct: 763 IMLMNRKAKEEWEKKQAEAEKLRKVNEPDGDSGIDGEKEKDDGRIKSVKVNKEEDDKMRT 822
Query: 764 XXXXXXXXXXXXXXXMLSKWQLMAEQARQKREGGIDVPSGSQPFNDVNHKPLSTFGRNA- 588
MLSKWQLMAEQARQKREGG D+ SGSQ D + +PL T GRN
Sbjct: 823 TAANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDMASGSQAGKDTSRRPL-TSGRNTK 881
Query: 587 -NQEAEKRGQSAAFATSGLSRKFGRNQVAVPQPVVVRKISIKDVIAVLEREPQMSKSTLI 411
NQ+AEKRGQ+ A SG RKFG+ Q V Q V R I++KDVIAVLEREPQMSKSTLI
Sbjct: 882 DNQDAEKRGQTTPSA-SGSGRKFGKTQATVSQTKVARAITVKDVIAVLEREPQMSKSTLI 940
Query: 410 YQLHEKM 390
Y+L+EK+
Sbjct: 941 YRLYEKV 947
>ref|XP_008373393.1| PREDICTED: transcription initiation factor TFIID subunit 4b [Malus
domestica]
Length = 948
Score = 835 bits (2157), Expect = 0.0
Identities = 512/957 (53%), Positives = 605/957 (63%), Gaps = 23/957 (2%)
Frame = -1
Query: 3191 MHSGADVEAFTAALNRDIEGDTSNSQPSDSDGAALXXXXXXXXXQLFPQWQTSSQDENAN 3012
MHSG DVEAF AALNRDIEGD S SQPSDSD A L Q PQ+QT+ QDE+
Sbjct: 1 MHSGRDVEAFQAALNRDIEGDASASQPSDSDSAILSQGSNNTSSQPLPQFQTTGQDESTA 60
Query: 3011 CXXXXXXXXXXXXXXS--ELAPKQHASGYENQQPQIDTSQERNCFPLQEKQAQKDSQQWQ 2838
C E+ KQ S EN Q + D SQE + F L +KQ Q D QQ Q
Sbjct: 61 CEMQHDQKIAQPRELHSYEMELKQQGSVAENMQLKSDASQELSHFSLSQKQPQGDLQQGQ 120
Query: 2837 AEAEQNTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNSESQYSKLQKMSNQHPMASEQA 2658
AE Q +LQ +T S K PV +E D T P SESQY KLQ+MS+Q M +EQ
Sbjct: 121 AE--QKSLQV--PETTGTPISGKIPVSNQEQDITPTPQSESQYLKLQRMSSQQAMITEQP 176
Query: 2657 INPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLKKNEISKDVFVRHMRSLVGDQM 2478
NPM+ KQVPF LLLPV+ PQLDKDRAMQL TL+ KLK NEISKD FVRH+RS+VGDQM
Sbjct: 177 SNPMNRSKQVPFGLLLPVLLPQLDKDRAMQLNTLFGKLKNNEISKDAFVRHIRSVVGDQM 236
Query: 2477 LKMAVFKLQTQAARNSRTGPNQFPSQSQASVQQHHLKMQ--TINGKQFPKPQSLAQLHQK 2304
LK+AV K+Q+Q + + GP QASVQQ KM T QFP P+S A L+Q+
Sbjct: 237 LKLAVMKVQSQHTKTLQPGPKH-QLLPQASVQQQSPKMPSATAGSTQFPDPRSFA-LNQR 294
Query: 2303 GV--PEDPSHVPSTAAQLKSVSNNASIGNNAQKSQEVEXXXXXXXXXXXXXXXXXXSTLN 2130
G P DPSH+PS+ QL+S S+++ I N+A+K +E E N
Sbjct: 295 GTNSPTDPSHIPSSTVQLQSDSSHSVIENSAKKLREAERQSDSHGMQVSQMSSSSVVAGN 354
Query: 2129 QEKERCTIPIXXXXXXXXXXXXXXXXXFPTYGNTGGNYPPFSGTNVNTSSTSLNQQPHDL 1950
QE+ER + P+ YG+TGGNY P++GT++NT L QQPHD
Sbjct: 355 QERERSSGPMQILNKQQQPLQYPQSSYS-MYGSTGGNYHPYTGTSINT--LPLKQQPHDS 411
Query: 1949 QMRQVPVNQSTGASQSV------NVTSLPKFERQNSLSEQTRVQGGTLSHLTNNSALQQN 1788
Q+RQ+P +QS G++QS NV + ERQN + + +R+QGG+LSH TNNS LQQN
Sbjct: 412 QLRQIPQHQSMGSAQSGGEAKGGNVMGVSNLERQNLMKDPSRLQGGSLSHFTNNSNLQQN 471
Query: 1787 SVHWQSSTGKVPKNGVPSSTTYVKQEPLDQLNEQQNKCQLSAPHPQGLSAFSSAHIEQGN 1608
WQSS K P +G SS +VKQE DQ EQQ+K LS + Q L+ S+A +EQGN
Sbjct: 472 IAPWQSSN-KEPHSGPLSSMPFVKQELTDQTAEQQHKPPLS--NSQELT--SAAKLEQGN 526
Query: 1607 AIPGTSMGETFEMQSSRMGFXXXXXXXXXXXXXXXXXS--------QLDPNFLSSCRIVS 1452
PG SM E + QSSRMGF + Q DPN L RI S
Sbjct: 527 GSPGISMDEPLDKQSSRMGFPASVSIGASSSTSTVPPNSVSSSMTTQADPNVLLGHRIPS 586
Query: 1451 STSPIGPGSNGKAPTRKPYFGQKRPLEALGSSPPLSSKKQKVSGPLSDQSIEQLNDVTAV 1272
TSP G + +AP +KP GQK+PLEALGSSPP SSKKQKVSG DQSIEQLNDVTAV
Sbjct: 587 GTSPAG--ISNRAPPKKPSVGQKKPLEALGSSPPPSSKKQKVSGNFLDQSIEQLNDVTAV 644
Query: 1271 SGVNLREEEEQLFSGSKEDSRVSEASRRAVQEEEDRHFLQKRPLRKKLAEIMARCDVKSI 1092
SGVNLREEEEQLFSG KEDSR SEASR+ VQEEE+R LQK PL+KKLAEIM +C +KS+
Sbjct: 645 SGVNLREEEEQLFSGPKEDSRASEASRKFVQEEEERLILQKDPLQKKLAEIMIKCGLKSV 704
Query: 1091 SNDVERCLSLCVEERMHGLISNLIRLSKQRVDIEKARHRALITSDVRQQIMLMNXXXXXX 912
S DVERCLSLCVEERM GLI+NLIRLSKQRVD EK RHR +ITSDVRQQ+M +N
Sbjct: 705 SYDVERCLSLCVEERMRGLINNLIRLSKQRVDAEKPRHRTIITSDVRQQVMNLNQNAREE 764
Query: 911 XXXXXXXXXXXXKLDEPEGNPGVDGDKEKDEGRVKSLKANKEDDEKXXXXXXXXXXXXXX 732
KL+EPE + GVDGDK+KDEGR KS K NKE+D+K
Sbjct: 765 FEKKQAEAEKLRKLNEPEVSNGVDGDKDKDEGRSKSFKPNKEEDDKMRTTAANVAARAAV 824
Query: 731 XXXXMLSKWQLMAEQARQKREGGIDVPSGSQPFNDVNHKPLSTFGRNA--NQEAEKR-GQ 561
MLSKWQLMAEQARQKREGGIDV SGSQP DVN KP + GR NQEAEKR G
Sbjct: 825 GGDDMLSKWQLMAEQARQKREGGIDVASGSQPGKDVNRKPTLSAGRTMKDNQEAEKRSGG 884
Query: 560 SAAFATSGLSRKFGRNQVAVPQPVVVRKISIKDVIAVLEREPQMSKSTLIYQLHEKM 390
+ + +G RK G+NQV VPQ V R IS+KDVIAVLEREPQMS+ST+IY+L E++
Sbjct: 885 TPVASAAGTIRKCGKNQVNVPQTKVARSISVKDVIAVLEREPQMSRSTMIYRLFERV 941
>ref|XP_007018536.1| TBP-associated factor 4, putative isoform 1 [Theobroma cacao]
gi|508723864|gb|EOY15761.1| TBP-associated factor 4,
putative isoform 1 [Theobroma cacao]
Length = 950
Score = 833 bits (2153), Expect = 0.0
Identities = 512/970 (52%), Positives = 614/970 (63%), Gaps = 20/970 (2%)
Frame = -1
Query: 3239 MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIEGDTSN-SQPSDSDGAALXXXXXXXX 3063
MDPSI+KLLEEDEDE+MHSGADVEAF AALNRDIEGD + SQ S S+ A L
Sbjct: 1 MDPSIVKLLEEDEDESMHSGADVEAFQAALNRDIEGDAATTSQTSGSNTAVLSQGSNPAS 60
Query: 3062 XQLFPQWQTSSQDENANCXXXXXXXXXXXXXXS--ELAPKQHASGYENQQPQI----DTS 2901
Q QW T QD N N E+ KQ + Q Q+ D
Sbjct: 61 SQSVAQWPTKGQDGNTNFQNQRALRSAQQQQQPSSEMEQKQQGAVVAGSQHQVRQPNDVP 120
Query: 2900 QERNCFPLQEKQAQKDSQQWQAEAEQNTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNS 2721
QE N P Q+KQ Q D QQ AE + + Q+ +Q +EK+P+ REP+ T +S
Sbjct: 121 QEINRLPQQQKQPQDDRQQGVAEQ----VSAQVPQSTGVQTTEKSPIPAREPERTNNQDS 176
Query: 2720 ESQYSKLQKMSNQHPMASEQAINPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLK 2541
ESQY KLQKMSNQ +EQ NPM+ GKQVPFA+LLP + PQLDKDRAMQL TLY KLK
Sbjct: 177 ESQYMKLQKMSNQQAGGTEQPNNPMNRGKQVPFAVLLPALLPQLDKDRAMQLHTLYGKLK 236
Query: 2540 KNEISKDVFVRHMRSLVGDQMLKMAVFKLQTQAARNSRTGPNQFPSQSQASVQQHHLKMQ 2361
KNEI+KD FVRHMR +VGDQML++AV KLQ Q + N QFP QSQA+ +Q+ +M
Sbjct: 237 KNEIAKDGFVRHMRDIVGDQMLRLAVNKLQVQMSSN------QFPLQSQAAARQNTPRMP 290
Query: 2360 TING--KQFPKPQSLAQLHQKGV--PEDPSHVPSTAAQLKSVSNNASIGNNAQKSQEVEX 2193
+++ QF P SLAQL QKG P PS PS A +++ S+ +S N A KSQE++
Sbjct: 291 SVSAGATQFAGPHSLAQLQQKGPNSPATPSRAPSPAVPMQTNSSYSSTENKAPKSQEMDR 350
Query: 2192 XXXXXXXXXXXXXXXXXST-LNQEKERCTIPIXXXXXXXXXXXXXXXXXFPTYGNTGGNY 2016
+T +NQE++R +IP+ F +G++ +Y
Sbjct: 351 QSDSRFGVLGSQISSFSTTTVNQERDRSSIPVQGLNKQQQQHLNFPQTSFSMHGSS--SY 408
Query: 2015 PPFSGTNVNTSSTSLNQQPHDLQMRQVPVNQSTGAS------QSVNVTSLPKFERQNSLS 1854
P+SG +VN S +SL QPHD QMRQ ++QS G++ Q++NV S PKFERQNS +
Sbjct: 409 HPYSGPSVNASGSSLKPQPHDSQMRQTALHQSMGSNPVGGPTQAMNVMSGPKFERQNSSN 468
Query: 1853 EQTRVQGGTLSHLTNNSALQQNSVHWQSSTGKVPKNGVPSSTTYVKQEPLDQLNEQQNKC 1674
+ R+QGG+LSH +N+S V WQ+S+ K G SS TYVKQE +DQ E Q+K
Sbjct: 469 DPNRLQGGSLSHFSNSS------VPWQASSSKETNPGPLSSVTYVKQESVDQGAEHQHKP 522
Query: 1673 QLSAPHPQGLSAFSSAHIEQGNAIPGTSMGETFEMQSSRMGFXXXXXXXXXXXXXXXXXS 1494
LSA QGL +A EQGNA+ T E E QSSR+GF
Sbjct: 523 HLSAS--QGLP---TALGEQGNAVTTTPKDEPLEKQSSRIGFSTPNSMVPPNSVSPITT- 576
Query: 1493 QLDPNFLSSCRIVSSTSPIGPGSNGKAPTRKPYFGQKRPLEALGSSPPLSSKKQKVSGPL 1314
Q+D N L R + + P G+N + P +KP GQK+PLE LGSSPP SSKKQKVSG
Sbjct: 577 QVDSNVLLGSR--NPSVPSLAGANSRTPQKKPSVGQKKPLETLGSSPPPSSKKQKVSGAF 634
Query: 1313 SDQSIEQLNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRAVQEEEDRHFLQKRPLRK 1134
DQSIEQLNDVTAVSGVNLREEEEQLFSG K+DSRVSEASRR VQEEE+R LQK PL+K
Sbjct: 635 LDQSIEQLNDVTAVSGVNLREEEEQLFSGPKDDSRVSEASRRVVQEEEERLILQKTPLQK 694
Query: 1133 KLAEIMARCDVKSISNDVERCLSLCVEERMHGLISNLIRLSKQRVDIEKARHRALITSDV 954
KLAEIMA+ +K+ISNDVERC+SLCVEERM GLI NLIRLSKQRVD EK+RHR LITSDV
Sbjct: 695 KLAEIMAKSGLKNISNDVERCVSLCVEERMRGLICNLIRLSKQRVDDEKSRHRTLITSDV 754
Query: 953 RQQIMLMNXXXXXXXXXXXXXXXXXXKLDEPEGNPGVDGDKEKDEGRVKSLKANKEDDEK 774
RQQIM+MN KL+EPE VDGDKEKD+ RVKS+KANKE+D+K
Sbjct: 755 RQQIMMMNRNAREEWEKKQAEAEKLRKLNEPEAETAVDGDKEKDDNRVKSVKANKEEDDK 814
Query: 773 XXXXXXXXXXXXXXXXXXMLSKWQLMAEQARQKREGGIDVPSGSQPFNDVNHKPLSTFGR 594
MLSKWQLMAEQARQKREGG+D SGSQ DVN +PLS +
Sbjct: 815 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDAASGSQAGKDVNRRPLSASVK 874
Query: 593 NA--NQEAEKRGQSAAFATSGLSRKFGRNQVAVPQPVVVRKISIKDVIAVLEREPQMSKS 420
N NQE+EKRG + A SG SRKFGRNQV PQ V R IS+KDVIAVLEREPQMSKS
Sbjct: 875 NTKDNQESEKRGPLSPLA-SGASRKFGRNQVITPQTRVARTISVKDVIAVLEREPQMSKS 933
Query: 419 TLIYQLHEKM 390
TLIY+L+EK+
Sbjct: 934 TLIYRLYEKI 943
>ref|XP_011465030.1| PREDICTED: transcription initiation factor TFIID subunit 4b [Fragaria
vesca subsp. vesca] gi|764589677|ref|XP_011465031.1|
PREDICTED: transcription initiation factor TFIID subunit
4b [Fragaria vesca subsp. vesca]
Length = 958
Score = 819 bits (2115), Expect = 0.0
Identities = 512/978 (52%), Positives = 607/978 (62%), Gaps = 29/978 (2%)
Frame = -1
Query: 3239 MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIEGDTSN-SQPSDSDGAALXXXXXXXX 3063
MDPSIMKLLE+DEDETMHSGADVEAF AALNRDIEGD S QPSDSD A L
Sbjct: 1 MDPSIMKLLEDDEDETMHSGADVEAFQAALNRDIEGDVSALQQPSDSDSAVLSQGSNNTS 60
Query: 3062 XQLFPQWQTSSQDEN-ANCXXXXXXXXXXXXXXSELAPKQHASGYENQQPQIDTSQER-N 2889
Q PQ Q + QDE+ A E+ KQ S EN Q D SQER N
Sbjct: 61 SQSLPQLQNARQDESTAGQIQHDQNIAQQRELPYEMELKQQRSISENMPQQSDASQERLN 120
Query: 2888 CFPLQEKQAQKDSQQWQAEAEQNTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNSESQY 2709
FPL +KQ D QQ QA+ Q LQS M S K PV +E T P ++SQY
Sbjct: 121 HFPLPQKQPHGDLQQGQAD--QKPLQS------GMLMSGKHPVSTQEQVLTPKPENDSQY 172
Query: 2708 SKLQKMSNQHPMASEQAINPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLKKNEI 2529
+KLQK+S+Q M +EQ P + KQVPF LLLPV+ PQLDKDRAMQL TL+ KLK NEI
Sbjct: 173 AKLQKISSQQAMTTEQPSIPANRSKQVPFGLLLPVLLPQLDKDRAMQLTTLFSKLKNNEI 232
Query: 2528 SKDVFVRHMRSLVGDQMLKMAVFKLQTQAARNSRTGPNQFPSQSQASVQQHHLKMQTIN- 2352
SKD FVRH+RS+VGDQMLKMAV K+QTQ + P QAS+QQ +M +IN
Sbjct: 233 SKDAFVRHIRSVVGDQMLKMAVHKVQTQPVLKQQLTP-------QASLQQQPPRMPSINA 285
Query: 2351 -GKQFPKPQSLAQLHQKGV--PEDPSHVPSTAAQLKSVSNNASIGNNAQKSQEVEXXXXX 2181
QF P+S A + Q+GV PSH+ T +++ S++++I N+A+K +E E
Sbjct: 286 GATQFTDPRSFA-IQQRGVNPSTGPSHI--TTVPVQTDSSHSAIENSAKKLREAERQSDP 342
Query: 2180 XXXXXXXXXXXXXSTLNQEKERCTIPIXXXXXXXXXXXXXXXXXFPTYGNTGGNYPPFSG 2001
NQE++R ++P+ F YG+TGGNY P+ G
Sbjct: 343 HGMQINQMSSSSTGASNQERDRSSVPMQVHSNQQQHQLHYPQSTFAMYGSTGGNYHPYPG 402
Query: 2000 TNVNTSSTSLNQQPHDLQMRQVPVNQSTGASQSV-------NVTSLPKFERQNSLSEQTR 1842
TNV+T + QQPHD +R +P +Q G++QSV N+ S+PK ERQNS+++ R
Sbjct: 403 TNVST--MPIKQQPHDSHLRPIPQHQGMGSAQSVGGETQGTNIMSVPKLERQNSVNDPGR 460
Query: 1841 VQGGTLSHLTNNSALQQNSVHWQSSTGKVPKNGVPSSTTYVKQEPLDQLNEQQNKCQLSA 1662
QGG+L H TN+S LQQ+ + WQSS K +G SS YVKQEP+DQ EQQ+K LS
Sbjct: 461 QQGGSLPHFTNSSTLQQHQIPWQSS-NKEQISGPSSSMAYVKQEPIDQSAEQQHKTPLS- 518
Query: 1661 PHPQGLSAFSSAHIEQGNAIPGTSMGETFEMQSSRMGF------------XXXXXXXXXX 1518
+ Q L SS +EQ +A PG SM E+ E QSSRMGF
Sbjct: 519 -NNQRLPYASSLQLEQISASPGVSMDESLEKQSSRMGFSSAGPPGSMVISSSTSTGPPLT 577
Query: 1517 XXXXXXXSQLDPNFLSSCRIVSSTSPIGPGSNGKAPTRKPYFGQKRPLEALGSSPPLSS- 1341
+Q DPN S +I S T G+N + P +K GQK+P EALGS PP SS
Sbjct: 578 PISSTTMTQADPNLGS--KIPSGTP---AGTNNRIPAKKTSVGQKKPSEALGSPPPPSSG 632
Query: 1340 KKQKVSGPLSDQSIEQLNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRAVQEEEDRH 1161
KKQKVSG SDQSIEQLNDVTAVSGVNLREEEEQLFSG K+DSR SEASRR VQEEE+R
Sbjct: 633 KKQKVSGAFSDQSIEQLNDVTAVSGVNLREEEEQLFSGPKDDSRASEASRRVVQEEEERL 692
Query: 1160 FLQKRPLRKKLAEIMARCDVKSISNDVERCLSLCVEERMHGLISNLIRLSKQRVDIEKAR 981
LQK PL+KKLAEIM R +KSIS+DVERCLSLCVEERM GLI+NLIRLSKQRVD EK +
Sbjct: 693 ILQKTPLQKKLAEIMFRSGLKSISHDVERCLSLCVEERMRGLINNLIRLSKQRVDAEKTK 752
Query: 980 HRALITSDVRQQIMLMNXXXXXXXXXXXXXXXXXXKLDEPEGNPGVDGDKEKDEGRVKSL 801
H +ITSDV+QQIM N KL+EP+ + GVDGDK++DEGR KS
Sbjct: 753 HHTIITSDVQQQIMNQNKKAKEEWEKKQAEAEKVRKLNEPDLSNGVDGDKDRDEGRSKSF 812
Query: 800 KANKEDDEKXXXXXXXXXXXXXXXXXXMLSKWQLMAEQARQKREGGIDVPSGSQPFNDVN 621
KANKEDD+K MLSKWQLMAEQARQKREGG DV SGSQP DVN
Sbjct: 813 KANKEDDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGSDVASGSQPGKDVN 872
Query: 620 HKPLSTFGR--NANQEAEKRGQSAAFATSGLSRKFGRNQVAVPQPVVVRKISIKDVIAVL 447
KP S GR NQEAEKRG +A + +G RKFG+NQV VPQ V R IS+KDVI+VL
Sbjct: 873 RKPTSAAGRIMKNNQEAEKRGGAAPVSVAGTVRKFGKNQVMVPQTRVARSISVKDVISVL 932
Query: 446 EREPQMSKSTLIYQLHEK 393
EREPQMSKS LIY L+EK
Sbjct: 933 EREPQMSKSPLIYCLYEK 950
>ref|XP_007018537.1| TBP-associated factor 4, putative isoform 2 [Theobroma cacao]
gi|508723865|gb|EOY15762.1| TBP-associated factor 4,
putative isoform 2 [Theobroma cacao]
Length = 944
Score = 818 bits (2114), Expect = 0.0
Identities = 507/970 (52%), Positives = 609/970 (62%), Gaps = 20/970 (2%)
Frame = -1
Query: 3239 MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIEGDTSN-SQPSDSDGAALXXXXXXXX 3063
MDPSI+KLLEEDEDE+MHSGADVEAF AALNRDIEGD + SQ S S+ A L
Sbjct: 1 MDPSIVKLLEEDEDESMHSGADVEAFQAALNRDIEGDAATTSQTSGSNTAVLSQGSNPAS 60
Query: 3062 XQLFPQWQTSSQDENANCXXXXXXXXXXXXXXS--ELAPKQHASGYENQQPQI----DTS 2901
Q QW T QD N N E+ KQ + Q Q+ D
Sbjct: 61 SQSVAQWPTKGQDGNTNFQNQRALRSAQQQQQPSSEMEQKQQGAVVAGSQHQVRQPNDVP 120
Query: 2900 QERNCFPLQEKQAQKDSQQWQAEAEQNTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNS 2721
QE N P Q+KQ Q D QQ AE + + Q+ +Q +EK+P+ REP+ T +S
Sbjct: 121 QEINRLPQQQKQPQDDRQQGVAEQ----VSAQVPQSTGVQTTEKSPIPAREPERTNNQDS 176
Query: 2720 ESQYSKLQKMSNQHPMASEQAINPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLK 2541
ESQY KLQKMSNQ +EQ NPM+ GKQVPFA+LLP + PQLDKDRAMQL TLY KLK
Sbjct: 177 ESQYMKLQKMSNQQAGGTEQPNNPMNRGKQVPFAVLLPALLPQLDKDRAMQLHTLYGKLK 236
Query: 2540 KNEISKDVFVRHMRSLVGDQMLKMAVFKLQTQAARNSRTGPNQFPSQSQASVQQHHLKMQ 2361
KNEI+KD FVRHMR +VGDQML++AV KLQ Q + N QFP QSQA+ +Q+ +M
Sbjct: 237 KNEIAKDGFVRHMRDIVGDQMLRLAVNKLQVQMSSN------QFPLQSQAAARQNTPRMP 290
Query: 2360 TING--KQFPKPQSLAQLHQKGV--PEDPSHVPSTAAQLKSVSNNASIGNNAQKSQEVEX 2193
+++ QF P SLAQL QKG P PS PS A +++ S+ +S N A KSQE++
Sbjct: 291 SVSAGATQFAGPHSLAQLQQKGPNSPATPSRAPSPAVPMQTNSSYSSTENKAPKSQEMDR 350
Query: 2192 XXXXXXXXXXXXXXXXXST-LNQEKERCTIPIXXXXXXXXXXXXXXXXXFPTYGNTGGNY 2016
+T +NQE++R +IP+ F +G++ +Y
Sbjct: 351 QSDSRFGVLGSQISSFSTTTVNQERDRSSIPVQGLNKQQQQHLNFPQTSFSMHGSS--SY 408
Query: 2015 PPFSGTNVNTSSTSLNQQPHDLQMRQVPVNQSTGAS------QSVNVTSLPKFERQNSLS 1854
P+SG +VN S +SL QPHD QMRQ ++QS G++ Q++NV S PKFERQNS +
Sbjct: 409 HPYSGPSVNASGSSLKPQPHDSQMRQTALHQSMGSNPVGGPTQAMNVMSGPKFERQNSSN 468
Query: 1853 EQTRVQGGTLSHLTNNSALQQNSVHWQSSTGKVPKNGVPSSTTYVKQEPLDQLNEQQNKC 1674
+ R+QGG+LSH +N+S V WQ+S+ K G SS TYVKQE +DQ E Q+K
Sbjct: 469 DPNRLQGGSLSHFSNSS------VPWQASSSKETNPGPLSSVTYVKQESVDQGAEHQHKP 522
Query: 1673 QLSAPHPQGLSAFSSAHIEQGNAIPGTSMGETFEMQSSRMGFXXXXXXXXXXXXXXXXXS 1494
LSA QGL +A EQGNA+ T E E QSSR+GF
Sbjct: 523 HLSAS--QGLP---TALGEQGNAVTTTPKDEPLEKQSSRIGFSTPNSMVPPNSVSPITT- 576
Query: 1493 QLDPNFLSSCRIVSSTSPIGPGSNGKAPTRKPYFGQKRPLEALGSSPPLSSKKQKVSGPL 1314
Q+D N L R + + P G+N + P +KP GQK+PLE LGSSPP SSKKQKVSG
Sbjct: 577 QVDSNVLLGSR--NPSVPSLAGANSRTPQKKPSVGQKKPLETLGSSPPPSSKKQKVSGAF 634
Query: 1313 SDQSIEQLNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRAVQEEEDRHFLQKRPLRK 1134
DQSIEQLNDVTAVSGVNLREEEEQLFSG K+DSRVSEASRR VQEEE+R LQK PL+K
Sbjct: 635 LDQSIEQLNDVTAVSGVNLREEEEQLFSGPKDDSRVSEASRRVVQEEEERLILQKTPLQK 694
Query: 1133 KLAEIMARCDVKSISNDVERCLSLCVEERMHGLISNLIRLSKQRVDIEKARHRALITSDV 954
KLAEIMA+ +K+ISNDVERC+SLCVEERM GLI NLIRLSKQ +RHR LITSDV
Sbjct: 695 KLAEIMAKSGLKNISNDVERCVSLCVEERMRGLICNLIRLSKQ------SRHRTLITSDV 748
Query: 953 RQQIMLMNXXXXXXXXXXXXXXXXXXKLDEPEGNPGVDGDKEKDEGRVKSLKANKEDDEK 774
RQQIM+MN KL+EPE VDGDKEKD+ RVKS+KANKE+D+K
Sbjct: 749 RQQIMMMNRNAREEWEKKQAEAEKLRKLNEPEAETAVDGDKEKDDNRVKSVKANKEEDDK 808
Query: 773 XXXXXXXXXXXXXXXXXXMLSKWQLMAEQARQKREGGIDVPSGSQPFNDVNHKPLSTFGR 594
MLSKWQLMAEQARQKREGG+D SGSQ DVN +PLS +
Sbjct: 809 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDAASGSQAGKDVNRRPLSASVK 868
Query: 593 NA--NQEAEKRGQSAAFATSGLSRKFGRNQVAVPQPVVVRKISIKDVIAVLEREPQMSKS 420
N NQE+EKRG + A SG SRKFGRNQV PQ V R IS+KDVIAVLEREPQMSKS
Sbjct: 869 NTKDNQESEKRGPLSPLA-SGASRKFGRNQVITPQTRVARTISVKDVIAVLEREPQMSKS 927
Query: 419 TLIYQLHEKM 390
TLIY+L+EK+
Sbjct: 928 TLIYRLYEKI 937
>ref|XP_012466579.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X2 [Gossypium raimondii]
Length = 936
Score = 789 bits (2037), Expect = 0.0
Identities = 484/961 (50%), Positives = 593/961 (61%), Gaps = 12/961 (1%)
Frame = -1
Query: 3239 MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIEGDTSNSQPSDSDGAALXXXXXXXXX 3060
MDPSI+K EEDEDE+MHSGADVEAF AALNRDIEGD SNSQP DSD L
Sbjct: 1 MDPSIVKFFEEDEDESMHSGADVEAFQAALNRDIEGDASNSQPPDSD-TVLSQGSNRVSS 59
Query: 3059 QLFPQWQTSSQDENANCXXXXXXXXXXXXXXSELAPKQHASGYENQQPQIDTSQERNCFP 2880
Q QW T QD NAN +Q + Q D Q N P
Sbjct: 60 QSLAQWPTVGQDGNANFQHQQPVQSAQQRSSEMEQKQQGVLVMGSLQQPNDVPQGVNRLP 119
Query: 2879 LQEKQAQKDSQQWQAEAEQNTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNSESQYSKL 2700
Q+KQ Q D QQ AE + + +Q +E++P+ REP+ +SESQY+KL
Sbjct: 120 PQQKQPQDDHQQGVAEQ----VSAQVPLMAGIQTTERSPI-PREPERINIQDSESQYAKL 174
Query: 2699 QKMSNQHPMASEQAINPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLKKNEISKD 2520
QKMSNQ +EQ N ++ GKQVPFA+LLP + PQLDKDRAMQL TLY KLKKNEI+KD
Sbjct: 175 QKMSNQQAGGTEQPNNQVNRGKQVPFAVLLPSLLPQLDKDRAMQLHTLYGKLKKNEIAKD 234
Query: 2519 VFVRHMRSLVGDQMLKMAVFKLQTQAARNSRTGPNQFPSQSQASVQQHHLKMQTINGK-Q 2343
FVRHMR +VGDQML++AV KLQ Q + N Q P QSQ + + + +M ++ G Q
Sbjct: 235 GFVRHMRDIVGDQMLRLAVNKLQVQMSSN------QVPLQSQVAARSNTPRMPSVGGATQ 288
Query: 2342 FPKPQSLAQLHQKGV--PEDPSHVPSTAAQLKSVSNNASIGNNAQKSQEVEXXXXXXXXX 2169
F P +LAQLHQKG P + SH A +++ S+ SI N QKSQE++
Sbjct: 289 FGGPHTLAQLHQKGPNSPANSSHPSPQAVLMQTNSSYLSIENKVQKSQEMDRQPDSHFGL 348
Query: 2168 XXXXXXXXXST-LNQEKERCTIPIXXXXXXXXXXXXXXXXXFPTYGNTGGNYPPFSGTNV 1992
ST +NQE++R +IP+ YG++ NY +SG+NV
Sbjct: 349 LGSQNPSSSSTTVNQERDRASIPVQGINMQQQHLNFAQTSFG-MYGSS--NYHTYSGSNV 405
Query: 1991 NTSSTSLNQQPHDLQMRQVPVNQSTG------ASQSVNVTSLPKFERQNSLSEQTRVQGG 1830
+ S + L QPH+ Q+RQ+P +QS G A+Q++N+ PKFERQNS ++ R+QGG
Sbjct: 406 SNSGSCLKPQPHESQIRQIPHHQSMGSNPVGGATQTMNMMGGPKFERQNSTNDPNRLQGG 465
Query: 1829 TLSHLTNNSALQQNSVHWQSSTGKVPKNGVPSSTTYVKQEPLDQLNEQQNKCQLSAPHPQ 1650
T+SH ++NS V WQ+S+ K G SS T+VKQE +DQ+ EQQ+ LSA H
Sbjct: 466 TISHFSSNS------VSWQASSSKELNPGPLSSMTFVKQESVDQVAEQQHGLYLSATHGS 519
Query: 1649 GLSAFSSAHIEQGNAIPGTSMGETFEMQSSRMGFXXXXXXXXXXXXXXXXXSQLDPNFLS 1470
S+A +E+GNA+ T E E QSSR+GF +Q+D N
Sbjct: 520 -----STAIVEEGNAVSATPKDEFLEKQSSRVGFSTPTSMAPPNLLSPSITTQMDSN--- 571
Query: 1469 SCRIVSSTSPIGPGSNGKAPTRKPYFGQKRPLEALGSSPPLSSKKQKVSGPLSDQSIEQL 1290
+ S + P G NGKAP +KP QK+PLEALGSSPPLSSKKQKVSG SDQSIEQL
Sbjct: 572 ---LPSPSVPATAGVNGKAPQKKPCASQKKPLEALGSSPPLSSKKQKVSGGFSDQSIEQL 628
Query: 1289 NDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRAVQEEEDRHFLQKRPLRKKLAEIMAR 1110
NDVTAVSGVNLREEEEQLFSG K++SR+SEASRR VQEEE+R LQK PL+KKLAEIMA+
Sbjct: 629 NDVTAVSGVNLREEEEQLFSGPKDESRISEASRRIVQEEEERVILQKIPLQKKLAEIMAK 688
Query: 1109 CDVKSISNDVERCLSLCVEERMHGLISNLIRLSKQRVDIEKARHRALITSDVRQQIMLMN 930
+K+ISNDVERC+SLCVEERMHGL+ NLIRLSKQRVD+EK RH+ + SDV+Q IM+MN
Sbjct: 689 SGLKNISNDVERCVSLCVEERMHGLLCNLIRLSKQRVDVEKPRHQTHVISDVQQHIMIMN 748
Query: 929 XXXXXXXXXXXXXXXXXXKLDEPEGNPGVDGDKEKDEGRVKSLKANKEDDEKXXXXXXXX 750
KL++PE D DKEKD+GRVK +KANKE+D+K
Sbjct: 749 RNAREEWEKKQAEAEKLRKLNDPEAETTADDDKEKDDGRVKVVKANKEEDDKMRATAANV 808
Query: 749 XXXXXXXXXXMLSKWQLMAEQARQKREGGIDVPSGSQPFNDVNHKPLSTFGRNAN--QEA 576
MLSKWQLMAEQARQKREGG D SG Q DVN +PLS G+N QE+
Sbjct: 809 AARAAVGGDDMLSKWQLMAEQARQKREGGTDSLSGCQAGKDVNCRPLSASGKNTTDYQES 868
Query: 575 EKRGQSAAFATSGLSRKFGRNQVAVPQPVVVRKISIKDVIAVLEREPQMSKSTLIYQLHE 396
E RG S + SG SRK GRNQ V R IS+KDVIAVLEREPQMSKSTLIY+L+E
Sbjct: 869 ENRG-SLSPPASGSSRKSGRNQGVSTHTRVARSISVKDVIAVLEREPQMSKSTLIYRLYE 927
Query: 395 K 393
K
Sbjct: 928 K 928
>ref|XP_012466578.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X1 [Gossypium raimondii]
Length = 940
Score = 788 bits (2036), Expect = 0.0
Identities = 484/961 (50%), Positives = 593/961 (61%), Gaps = 12/961 (1%)
Frame = -1
Query: 3239 MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIEGDTSNSQPSDSDGAALXXXXXXXXX 3060
MDPSI+K EEDEDE+MHSGADVEAF AALNRDIEGD SNSQP DSD L
Sbjct: 1 MDPSIVKFFEEDEDESMHSGADVEAFQAALNRDIEGDASNSQPPDSD-TVLSQGSNRVSS 59
Query: 3059 QLFPQWQTSSQDENANCXXXXXXXXXXXXXXSELAPKQHASGYENQQPQIDTSQERNCFP 2880
Q QW T QD NAN +Q + Q D Q N P
Sbjct: 60 QSLAQWPTVGQDGNANFQHQQPVQSAQQRSSEMEQKQQGVLVMGSLQQPNDVPQGVNRLP 119
Query: 2879 LQEKQAQKDSQQWQAEAEQNTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNSESQYSKL 2700
Q+KQ Q D QQ AE + + +Q +E++P+ REP+ +SESQY+KL
Sbjct: 120 PQQKQPQDDHQQGVAEQ----VSAQVPLMAGIQTTERSPI-PREPERINIQDSESQYAKL 174
Query: 2699 QKMSNQHPMASEQAINPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLKKNEISKD 2520
QKMSNQ +EQ N ++ GKQVPFA+LLP + PQLDKDRAMQL TLY KLKKNEI+KD
Sbjct: 175 QKMSNQQAGGTEQPNNQVNRGKQVPFAVLLPSLLPQLDKDRAMQLHTLYGKLKKNEIAKD 234
Query: 2519 VFVRHMRSLVGDQMLKMAVFKLQTQAARNSRTGPNQFPSQSQASVQQHHLKMQTINGK-Q 2343
FVRHMR +VGDQML++AV KLQ Q + N Q P QSQ + + + +M ++ G Q
Sbjct: 235 GFVRHMRDIVGDQMLRLAVNKLQVQMSSN------QVPLQSQVAARSNTPRMPSVGGATQ 288
Query: 2342 FPKPQSLAQLHQKGV--PEDPSHVPSTAAQLKSVSNNASIGNNAQKSQEVEXXXXXXXXX 2169
F P +LAQLHQKG P + SH A +++ S+ SI N QKSQE++
Sbjct: 289 FGGPHTLAQLHQKGPNSPANSSHPSPQAVLMQTNSSYLSIENKVQKSQEMDRQPDSHFGL 348
Query: 2168 XXXXXXXXXST-LNQEKERCTIPIXXXXXXXXXXXXXXXXXFPTYGNTGGNYPPFSGTNV 1992
ST +NQE++R +IP+ YG++ NY +SG+NV
Sbjct: 349 LGSQNPSSSSTTVNQERDRASIPVQGINMQQQHLNFAQTSFG-MYGSS--NYHTYSGSNV 405
Query: 1991 NTSSTSLNQQPHDLQMRQVPVNQSTG------ASQSVNVTSLPKFERQNSLSEQTRVQGG 1830
+ S + L QPH+ Q+RQ+P +QS G A+Q++N+ PKFERQNS ++ R+QGG
Sbjct: 406 SNSGSCLKPQPHESQIRQIPHHQSMGSNPVGGATQTMNMMGGPKFERQNSTNDPNRLQGG 465
Query: 1829 TLSHLTNNSALQQNSVHWQSSTGKVPKNGVPSSTTYVKQEPLDQLNEQQNKCQLSAPHPQ 1650
T+SH ++NS V WQ+S+ K G SS T+VKQE +DQ+ EQQ+ LSA H
Sbjct: 466 TISHFSSNS------VSWQASSSKELNPGPLSSMTFVKQESVDQVAEQQHGLYLSATHGS 519
Query: 1649 GLSAFSSAHIEQGNAIPGTSMGETFEMQSSRMGFXXXXXXXXXXXXXXXXXSQLDPNFLS 1470
S+A +E+GNA+ T E E QSSR+GF +Q+D N
Sbjct: 520 -----STAIVEEGNAVSATPKDEFLEKQSSRVGFSTPTSMAPPNLLSPSITTQMDSNLPL 574
Query: 1469 SCRIVSSTSPIGPGSNGKAPTRKPYFGQKRPLEALGSSPPLSSKKQKVSGPLSDQSIEQL 1290
+ S + P G NGKAP +KP QK+PLEALGSSPPLSSKKQKVSG SDQSIEQL
Sbjct: 575 GSQ--SPSVPATAGVNGKAPQKKPCASQKKPLEALGSSPPLSSKKQKVSGGFSDQSIEQL 632
Query: 1289 NDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRAVQEEEDRHFLQKRPLRKKLAEIMAR 1110
NDVTAVSGVNLREEEEQLFSG K++SR+SEASRR VQEEE+R LQK PL+KKLAEIMA+
Sbjct: 633 NDVTAVSGVNLREEEEQLFSGPKDESRISEASRRIVQEEEERVILQKIPLQKKLAEIMAK 692
Query: 1109 CDVKSISNDVERCLSLCVEERMHGLISNLIRLSKQRVDIEKARHRALITSDVRQQIMLMN 930
+K+ISNDVERC+SLCVEERMHGL+ NLIRLSKQRVD+EK RH+ + SDV+Q IM+MN
Sbjct: 693 SGLKNISNDVERCVSLCVEERMHGLLCNLIRLSKQRVDVEKPRHQTHVISDVQQHIMIMN 752
Query: 929 XXXXXXXXXXXXXXXXXXKLDEPEGNPGVDGDKEKDEGRVKSLKANKEDDEKXXXXXXXX 750
KL++PE D DKEKD+GRVK +KANKE+D+K
Sbjct: 753 RNAREEWEKKQAEAEKLRKLNDPEAETTADDDKEKDDGRVKVVKANKEEDDKMRATAANV 812
Query: 749 XXXXXXXXXXMLSKWQLMAEQARQKREGGIDVPSGSQPFNDVNHKPLSTFGRNAN--QEA 576
MLSKWQLMAEQARQKREGG D SG Q DVN +PLS G+N QE+
Sbjct: 813 AARAAVGGDDMLSKWQLMAEQARQKREGGTDSLSGCQAGKDVNCRPLSASGKNTTDYQES 872
Query: 575 EKRGQSAAFATSGLSRKFGRNQVAVPQPVVVRKISIKDVIAVLEREPQMSKSTLIYQLHE 396
E RG S + SG SRK GRNQ V R IS+KDVIAVLEREPQMSKSTLIY+L+E
Sbjct: 873 ENRG-SLSPPASGSSRKSGRNQGVSTHTRVARSISVKDVIAVLEREPQMSKSTLIYRLYE 931
Query: 395 K 393
K
Sbjct: 932 K 932
>ref|XP_011017133.1| PREDICTED: transcription initiation factor TFIID subunit 4b [Populus
euphratica]
Length = 942
Score = 787 bits (2033), Expect = 0.0
Identities = 479/962 (49%), Positives = 591/962 (61%), Gaps = 12/962 (1%)
Frame = -1
Query: 3239 MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIEGDTSNSQPSDSDGAALXXXXXXXXX 3060
MDP+IMKLLEEDEDETMHSGADVEAF AALNRDI GD S SQPSDS + L
Sbjct: 1 MDPNIMKLLEEDEDETMHSGADVEAFQAALNRDIGGDVSTSQPSDSS-SVLSHENNQSSS 59
Query: 3059 QLFPQWQTSSQDENANCXXXXXXXXXXXXXXSE-----LAPKQHASGYENQQPQIDTSQE 2895
Q FP W T Q++NA+ E + KQH +NQQ + D QE
Sbjct: 60 QQFPNWPTVGQNDNASNTEEHDAKSVEQQHHQEQQSSAMETKQHVPNADNQQQKGDVLQE 119
Query: 2894 RNCFPLQEKQAQKDSQQWQAEAEQNTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNSES 2715
P+ +K+ Q D +Q EQ +Q+ Q++ Q SE+ P EPD Q + +S
Sbjct: 120 PTHPPVLQKKNQDDIKQ--ELVEQAPVQT--PQSIGAQSSEQNPTPKSEPDKMQISDVDS 175
Query: 2714 QYSKLQKMSNQHPMASEQAINPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLKKN 2535
Q+ QK+ NQ ++QA N + KQ+PF LLLP ++P LDKDR MQLQTL+ KL+KN
Sbjct: 176 QFLNFQKIGNQQTTGTDQAAN-QKNSKQIPFVLLLPALKPHLDKDREMQLQTLFNKLRKN 234
Query: 2534 EISKDVFVRHMRSLVGDQMLKMAVFKLQTQAARNSRTGPNQFPSQSQASVQQHHLKMQTI 2355
EI+KD FVR MR++VGDQ+L++AV +LQ+Q+ G NQ QSQA Q + I
Sbjct: 235 EIAKDQFVRLMRNIVGDQVLRLAVAQLQSQS------GSNQSQLQSQAGRQNNVRMPAGI 288
Query: 2354 NGKQFPKPQSLAQLHQKG-VPEDPSHVPSTAAQLKSVSNNASIGNNAQKSQEVEXXXXXX 2178
+ QFP P L LH +G + +PS P +A QL++ S+ N+QKS+ VE
Sbjct: 289 SATQFPDPHHL--LHPRGSISSEPSRNPPSAVQLQTDSSIV----NSQKSKAVEWQADSL 342
Query: 2177 XXXXXXXXXXXXSTLNQEKERCTIPIXXXXXXXXXXXXXXXXXFPTYGNTGGNYPPFSGT 1998
S +NQE+ER +I + P YG++GGNY P+ GT
Sbjct: 343 GIQASQLHSSSTSIVNQERERPSISMQGQNKQQQHVHFPPTSF-PMYGSSGGNYNPYPGT 401
Query: 1997 NVNTSSTSLNQQPHDLQMRQVPVNQSTGASQ----SVNVTSLPKFERQNSLSEQTRVQGG 1830
V+TS S+ QPHD Q RQ+ +Q+ G +Q N+ S+PKFERQNS ++ +RV G
Sbjct: 402 KVSTSGPSVKPQPHDQQTRQISHHQNMGGTQVGGPPHNMISMPKFERQNSANDSSRVHSG 461
Query: 1829 TLSHLTNNSALQQNSVHWQSSTGKVPKNGVPSSTTYVKQEPLDQLNEQQNKCQLSAPHPQ 1650
++SH TN SA+QQNSV WQ+ + SS YVK L+Q EQQNK QL +P
Sbjct: 462 SVSHYTNKSAVQQNSVPWQAPPNREQSPAPFSSMNYVKPGSLEQAGEQQNKPQLLSPQVL 521
Query: 1649 GLSAFSSAHIEQGNAIPGTSMGETFEMQSSRMGFXXXXXXXXXXXXXXXXXSQLDPNFLS 1470
+ EQGNAI G ++ + QSS++ F +QLDPN
Sbjct: 522 PPAP------EQGNAISGNLKDQSLDKQSSKVVFSTSTGMVPPSSVSPSIVTQLDPNGQV 575
Query: 1469 SCRIVSSTSPIGPGSNGKAPTRKPYFGQKRPLEALGSSPPLSSKKQKVSGPLSDQSIEQL 1290
S R S SP G + + P +KP GQK+P EALGSSPP SSKKQKV+G SDQSIEQL
Sbjct: 576 SSRNPSVASPAGVSA--RTPPKKPSVGQKKPFEALGSSPPASSKKQKVAGAFSDQSIEQL 633
Query: 1289 NDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRAVQEEEDRHFLQKRPLRKKLAEIMAR 1110
NDVTAVSGVNLREEEEQLFSG+KEDSRVSEASRR VQEEE+R LQK PL+KKL EIMA+
Sbjct: 634 NDVTAVSGVNLREEEEQLFSGTKEDSRVSEASRRVVQEEEERLILQKIPLQKKLGEIMAK 693
Query: 1109 CDVKSISNDVERCLSLCVEERMHGLISNLIRLSKQRVDIEKARHRALITSDVRQQIMLMN 930
C +K+I NDV RCLSLCVEERM GLISNLIRLSKQRVD EK RH+ LITSDVRQQIM M+
Sbjct: 694 CGLKNIGNDVGRCLSLCVEERMRGLISNLIRLSKQRVDAEKPRHQTLITSDVRQQIMAMS 753
Query: 929 XXXXXXXXXXXXXXXXXXKLDEPEGNPGVDGDKEKDEGRVKSLKANKEDDEKXXXXXXXX 750
K+++PEG G +GDKEKDEGRVKS+KANKE+D+K
Sbjct: 754 RKAREEWEKRQAEAEKLQKVNDPEGENGGEGDKEKDEGRVKSVKANKEEDDKMRTTAANV 813
Query: 749 XXXXXXXXXXMLSKWQLMAEQARQKREGGIDVPSGSQPFNDVNHKPLSTFGRNA--NQEA 576
MLSKWQLMAEQARQKRE G++ S SQP DVN P S GRN N EA
Sbjct: 814 AARAAVGGADMLSKWQLMAEQARQKREVGMEGASSSQPVKDVNRNPQSPSGRNVKENLEA 873
Query: 575 EKRGQSAAFATSGLSRKFGRNQVAVPQPVVVRKISIKDVIAVLEREPQMSKSTLIYQLHE 396
EKR + + SG RKFGRNQ PQ VVR I++KDV+AVLEREPQMS+STLIYQL+E
Sbjct: 874 EKRSPAVPPSASGAVRKFGRNQAIAPQTKVVRTITVKDVMAVLEREPQMSRSTLIYQLYE 933
Query: 395 KM 390
++
Sbjct: 934 RI 935
>ref|XP_012446631.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X1 [Gossypium raimondii]
gi|763792861|gb|KJB59857.1| hypothetical protein
B456_009G277000 [Gossypium raimondii]
Length = 940
Score = 787 bits (2032), Expect = 0.0
Identities = 494/968 (51%), Positives = 587/968 (60%), Gaps = 19/968 (1%)
Frame = -1
Query: 3239 MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIEGDTSNSQPSDSDGAALXXXXXXXXX 3060
MDPSI+KLLEEDEDE+MHSGADVEAF AALNRDIEGD SNSQ S S+ A L
Sbjct: 1 MDPSIVKLLEEDEDESMHSGADVEAFQAALNRDIEGDASNSQQSGSNTAVLSQGSNPASS 60
Query: 3059 QLFPQWQTSSQDENANCXXXXXXXXXXXXXXS--ELAPKQHASGYENQQPQI----DTSQ 2898
Q QW TS QD N+N + E KQH + Q Q+ D +
Sbjct: 61 QSVAQWPTSGQDGNSNFQNQQVLQSAQQQQQTSSESEQKQHGAVVTGSQQQVQQPNDVPK 120
Query: 2897 ERNCFPLQEKQAQKDSQQWQAEAEQNTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNSE 2718
E P Q+KQ Q+D Q EQ + + Q +EK+P+ EP+ T +SE
Sbjct: 121 EHGRLPPQQKQPQEDHPQ--GVTEQIPAPVPQTTGIQSQTTEKSPIS-HEPERTNNQDSE 177
Query: 2717 SQYSKLQKMSNQHPMASEQAINPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLKK 2538
SQ++KLQKMSNQ +EQ +PM+ KQVPFA+LLP + PQLDKDRAMQL TLY KLKK
Sbjct: 178 SQFAKLQKMSNQQASGAEQPNSPMNRTKQVPFAVLLPALLPQLDKDRAMQLHTLYGKLKK 237
Query: 2537 NEISKDVFVRHMRSLVGDQMLKMAVFKLQTQAARNSRTGPNQFPSQSQASVQQHHLKMQT 2358
NEI+KD FVRHMR +VGDQML++AV KLQ Q + N QFP QS A ++Q+ +M +
Sbjct: 238 NEIAKDGFVRHMRDIVGDQMLRLAVNKLQVQMSSN------QFPLQSPAGLRQNTPRMPS 291
Query: 2357 INGK-QFPKPQSLAQLHQKGV--PEDPSHVPSTAAQLKSVSNNASIGNNAQKSQEVEXXX 2187
+ G QF P SL QLHQKG P + SHVPSTA +++ S+ S N AQKSQ+++
Sbjct: 292 VGGATQFAGPHSLVQLHQKGPNSPANSSHVPSTAVPMQTNSSYLSGENKAQKSQDMDRQS 351
Query: 2186 XXXXXXXXXXXXXXXST-LNQEKERCTIPIXXXXXXXXXXXXXXXXXFPTYGNTGGNYPP 2010
ST +NQE+ R +IP F YG+ NY
Sbjct: 352 DSRFGMLGSQISSSGSTTVNQERGRPSIPAQGINKQQQQHLNFPQTSFAMYGSN--NYHT 409
Query: 2009 FSGTNVNTSSTSLNQQPHDLQMR-----QVPVNQSTGASQSVNVTSLPKFERQNSLSEQT 1845
+SG NVNTS +SL QPHD QMR + N G++Q++N+ S PK ERQNS ++
Sbjct: 410 YSGPNVNTSGSSLKPQPHDSQMRPTAHQSIGSNPVGGSTQAMNMMSGPKLERQNSSNDPN 469
Query: 1844 RVQGGTLSHLTNNSALQQNSVHWQSSTGKVPKNGVPSSTTYVKQEPLDQLNEQQNKCQLS 1665
R+QG +LSH ++ S V WQ+S K G SS TYVKQE DQ +Q
Sbjct: 470 RLQGTSLSHFSSGS------VPWQASPSKELNPGPLSSATYVKQESADQGADQHR----- 518
Query: 1664 APHPQGLSAFSSAHIEQGNAIPGTSMGETFEMQSSRMGFXXXXXXXXXXXXXXXXXSQLD 1485
PH S+ EQG A+ T E E QSSR+GF Q+D
Sbjct: 519 -PHLSVTQGVSTTLAEQGKAVTSTPKDEPGEKQSSRVGFTTTPSITA----------QMD 567
Query: 1484 PNFLSSCRIVSSTSPIGPGSNGKAPTRKPYFGQKRPLEALGSSPPLSSKKQKVSGPLSDQ 1305
N L R S +P G N + P +KP GQK+PLEALGSSPP SSKKQKVSG SDQ
Sbjct: 568 SNVLLGSRNPSVPAPTG--MNARTPQKKPSIGQKKPLEALGSSPPPSSKKQKVSGAFSDQ 625
Query: 1304 SIEQLNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRAVQEEEDRHFLQKRPLRKKLA 1125
SIEQLNDVTAVSGVNLREEEEQL SG K++SRVSEASRR VQEEE+R FL+K PL+KKLA
Sbjct: 626 SIEQLNDVTAVSGVNLREEEEQLLSGPKDESRVSEASRRVVQEEEERLFLKKTPLQKKLA 685
Query: 1124 EIMARCDVKSISNDVERCLSLCVEERMHGLISNLIRLSKQRVDIEKARHRALITSDVRQQ 945
EIMA+ +K+ISNDVERCLSL VEERM GLI NLIRLSKQRVDIEK RHR +ITSDVRQQ
Sbjct: 686 EIMAKSGLKNISNDVERCLSLSVEERMRGLICNLIRLSKQRVDIEKPRHRTVITSDVRQQ 745
Query: 944 IMLMNXXXXXXXXXXXXXXXXXXKLDEPEGNPGVDGDKEKDEGRVKSLKANKEDDEKXXX 765
IM+MN KL+EPE DGDKEKD+ RVK++K NKE+D+K
Sbjct: 746 IMMMNQNARGEWEKKQAEAEKLRKLNEPEAETAFDGDKEKDDSRVKAVKVNKEEDDKMRT 805
Query: 764 XXXXXXXXXXXXXXXMLSKWQLMAEQARQKREGGIDVPSGSQPFNDVNHKPLSTFGRNA- 588
MLSKWQLMAEQARQKREGG D SGSQ D N +PLS G++
Sbjct: 806 TAANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDAASGSQASKDANRRPLSASGKSTK 865
Query: 587 -NQEAEKRGQSAAFATSGLSRKFGRNQ--VAVPQPVVVRKISIKDVIAVLEREPQMSKST 417
NQE+EKRG SG S+KFGRNQ V R ISIKDVIAVLEREPQMSKST
Sbjct: 866 DNQESEKRGPLNPHG-SGTSKKFGRNQGTTLTAHARVARTISIKDVIAVLEREPQMSKST 924
Query: 416 LIYQLHEK 393
LIY L+EK
Sbjct: 925 LIYGLYEK 932
>ref|XP_012466580.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X3 [Gossypium raimondii]
Length = 936
Score = 786 bits (2031), Expect = 0.0
Identities = 483/961 (50%), Positives = 593/961 (61%), Gaps = 12/961 (1%)
Frame = -1
Query: 3239 MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIEGDTSNSQPSDSDGAALXXXXXXXXX 3060
MDPSI+K EEDEDE+MHSGADVEAF AALNRDIEGD SNSQP DSD +
Sbjct: 1 MDPSIVKFFEEDEDESMHSGADVEAFQAALNRDIEGDASNSQPPDSDTGS-----NRVSS 55
Query: 3059 QLFPQWQTSSQDENANCXXXXXXXXXXXXXXSELAPKQHASGYENQQPQIDTSQERNCFP 2880
Q QW T QD NAN +Q + Q D Q N P
Sbjct: 56 QSLAQWPTVGQDGNANFQHQQPVQSAQQRSSEMEQKQQGVLVMGSLQQPNDVPQGVNRLP 115
Query: 2879 LQEKQAQKDSQQWQAEAEQNTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNSESQYSKL 2700
Q+KQ Q D QQ AE + + +Q +E++P+ REP+ +SESQY+KL
Sbjct: 116 PQQKQPQDDHQQGVAEQ----VSAQVPLMAGIQTTERSPI-PREPERINIQDSESQYAKL 170
Query: 2699 QKMSNQHPMASEQAINPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLKKNEISKD 2520
QKMSNQ +EQ N ++ GKQVPFA+LLP + PQLDKDRAMQL TLY KLKKNEI+KD
Sbjct: 171 QKMSNQQAGGTEQPNNQVNRGKQVPFAVLLPSLLPQLDKDRAMQLHTLYGKLKKNEIAKD 230
Query: 2519 VFVRHMRSLVGDQMLKMAVFKLQTQAARNSRTGPNQFPSQSQASVQQHHLKMQTINGK-Q 2343
FVRHMR +VGDQML++AV KLQ Q + N Q P QSQ + + + +M ++ G Q
Sbjct: 231 GFVRHMRDIVGDQMLRLAVNKLQVQMSSN------QVPLQSQVAARSNTPRMPSVGGATQ 284
Query: 2342 FPKPQSLAQLHQKGV--PEDPSHVPSTAAQLKSVSNNASIGNNAQKSQEVEXXXXXXXXX 2169
F P +LAQLHQKG P + SH A +++ S+ SI N QKSQE++
Sbjct: 285 FGGPHTLAQLHQKGPNSPANSSHPSPQAVLMQTNSSYLSIENKVQKSQEMDRQPDSHFGL 344
Query: 2168 XXXXXXXXXST-LNQEKERCTIPIXXXXXXXXXXXXXXXXXFPTYGNTGGNYPPFSGTNV 1992
ST +NQE++R +IP+ YG++ NY +SG+NV
Sbjct: 345 LGSQNPSSSSTTVNQERDRASIPVQGINMQQQHLNFAQTSFG-MYGSS--NYHTYSGSNV 401
Query: 1991 NTSSTSLNQQPHDLQMRQVPVNQSTG------ASQSVNVTSLPKFERQNSLSEQTRVQGG 1830
+ S + L QPH+ Q+RQ+P +QS G A+Q++N+ PKFERQNS ++ R+QGG
Sbjct: 402 SNSGSCLKPQPHESQIRQIPHHQSMGSNPVGGATQTMNMMGGPKFERQNSTNDPNRLQGG 461
Query: 1829 TLSHLTNNSALQQNSVHWQSSTGKVPKNGVPSSTTYVKQEPLDQLNEQQNKCQLSAPHPQ 1650
T+SH ++NS V WQ+S+ K G SS T+VKQE +DQ+ EQQ+ LSA H
Sbjct: 462 TISHFSSNS------VSWQASSSKELNPGPLSSMTFVKQESVDQVAEQQHGLYLSATHGS 515
Query: 1649 GLSAFSSAHIEQGNAIPGTSMGETFEMQSSRMGFXXXXXXXXXXXXXXXXXSQLDPNFLS 1470
S+A +E+GNA+ T E E QSSR+GF +Q+D N
Sbjct: 516 -----STAIVEEGNAVSATPKDEFLEKQSSRVGFSTPTSMAPPNLLSPSITTQMDSNLPL 570
Query: 1469 SCRIVSSTSPIGPGSNGKAPTRKPYFGQKRPLEALGSSPPLSSKKQKVSGPLSDQSIEQL 1290
+ S + P G NGKAP +KP QK+PLEALGSSPPLSSKKQKVSG SDQSIEQL
Sbjct: 571 GSQ--SPSVPATAGVNGKAPQKKPCASQKKPLEALGSSPPLSSKKQKVSGGFSDQSIEQL 628
Query: 1289 NDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRAVQEEEDRHFLQKRPLRKKLAEIMAR 1110
NDVTAVSGVNLREEEEQLFSG K++SR+SEASRR VQEEE+R LQK PL+KKLAEIMA+
Sbjct: 629 NDVTAVSGVNLREEEEQLFSGPKDESRISEASRRIVQEEEERVILQKIPLQKKLAEIMAK 688
Query: 1109 CDVKSISNDVERCLSLCVEERMHGLISNLIRLSKQRVDIEKARHRALITSDVRQQIMLMN 930
+K+ISNDVERC+SLCVEERMHGL+ NLIRLSKQRVD+EK RH+ + SDV+Q IM+MN
Sbjct: 689 SGLKNISNDVERCVSLCVEERMHGLLCNLIRLSKQRVDVEKPRHQTHVISDVQQHIMIMN 748
Query: 929 XXXXXXXXXXXXXXXXXXKLDEPEGNPGVDGDKEKDEGRVKSLKANKEDDEKXXXXXXXX 750
KL++PE D DKEKD+GRVK +KANKE+D+K
Sbjct: 749 RNAREEWEKKQAEAEKLRKLNDPEAETTADDDKEKDDGRVKVVKANKEEDDKMRATAANV 808
Query: 749 XXXXXXXXXXMLSKWQLMAEQARQKREGGIDVPSGSQPFNDVNHKPLSTFGRNAN--QEA 576
MLSKWQLMAEQARQKREGG D SG Q DVN +PLS G+N QE+
Sbjct: 809 AARAAVGGDDMLSKWQLMAEQARQKREGGTDSLSGCQAGKDVNCRPLSASGKNTTDYQES 868
Query: 575 EKRGQSAAFATSGLSRKFGRNQVAVPQPVVVRKISIKDVIAVLEREPQMSKSTLIYQLHE 396
E RG S + SG SRK GRNQ V R IS+KDVIAVLEREPQMSKSTLIY+L+E
Sbjct: 869 ENRG-SLSPPASGSSRKSGRNQGVSTHTRVARSISVKDVIAVLEREPQMSKSTLIYRLYE 927
Query: 395 K 393
K
Sbjct: 928 K 928
>ref|XP_010272122.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X2 [Nelumbo nucifera]
Length = 986
Score = 784 bits (2024), Expect = 0.0
Identities = 491/1000 (49%), Positives = 611/1000 (61%), Gaps = 50/1000 (5%)
Frame = -1
Query: 3239 MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIEGDTSNSQPSDSDGAALXXXXXXXXX 3060
MDPSIMKLLEEDEDET+HSGA+VEAFTAALNRDIEGDTS S+PSDS+ A L
Sbjct: 1 MDPSIMKLLEEDEDETIHSGAEVEAFTAALNRDIEGDTSTSKPSDSETADLPHNGNPTSS 60
Query: 3059 QLFPQWQTSSQDENANCXXXXXXXXXXXXXXS---ELAPKQHASGYENQQPQIDTSQERN 2889
QLFPQWQTS+Q+EN C E P QH S Q +SQER
Sbjct: 61 QLFPQWQTSNQEENNTCQNQQEEPRNLQPQEQCKSESDPMQHGSSANEQ-----SSQERA 115
Query: 2888 CFPLQEKQAQKDSQQWQAEAEQNTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNSES-Q 2712
PLQ+KQ+ Q+ EQN+ Q SQ +Q SE+ PV E D + +++ Q
Sbjct: 116 QLPLQQKQSTDQQQE-----EQNSPQF--SQKGGVQLSEQNPVHFSEQDRMLHTDTQHPQ 168
Query: 2711 YSKLQKMSNQHPMASEQAINPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLKKNE 2532
Y KLQK +NQ + ++ A NPMS KQVPF LLLPVI P LDKDRAMQLQTL+ KL+KNE
Sbjct: 169 YPKLQKTNNQQALPADLANNPMSRSKQVPFGLLLPVILPHLDKDRAMQLQTLFAKLRKNE 228
Query: 2531 ISKDVFVRHMRSLVGDQMLKMAVFKLQ------TQAARNSRTGPNQFPSQSQASV---QQ 2379
I+K+ F+R MRS+VGD MLK AV K+Q TQAA+N +TG +QF QSQAS QQ
Sbjct: 229 INKEGFIRLMRSIVGDHMLKQAVSKVQMQELSKTQAAQNPQTGSHQFQLQSQASSHHQQQ 288
Query: 2378 HH-----------------------LKMQTINGKQFPKPQSLAQLHQKGV--PEDPSHVP 2274
HH LKM ++ QF P S +QL QK P D S VP
Sbjct: 289 HHHQPQPQSQTQPQPQTQPQQQQQQLKMPSLTTSQFTDPHSFSQLQQKSQKSPTDLSQVP 348
Query: 2273 STAAQLKSVSNNASIGNNAQKSQEVEXXXXXXXXXXXXXXXXXXSTLNQEKERCTIPIXX 2094
++ Q+++ SN + N+ Q+S++ E S + QE+E TI +
Sbjct: 349 TSTVQIQADSNFLTTENSTQRSRDTESQSDSQGTHVSKMSSANMSMVKQERELPTISVQG 408
Query: 2093 XXXXXXXXXXXXXXXFPTYGNTGGNYPP---FSGTNVNTSSTSLNQQPHDLQMRQVPVNQ 1923
F YG T GNY +SG ++ ++TSL Q D QMRQVP++Q
Sbjct: 409 LNKQQQQHLHLPQTSFTMYGGTVGNYHSSHAYSGPPISGAATSLKSQTQDSQMRQVPLHQ 468
Query: 1922 ST------GASQSVNVTSLPKFERQNSLSEQTRVQGGTLSHLTNNSALQQNSVHWQSSTG 1761
S GA+Q VN+ S+ K+E QNS +E R+ G LSHL+++S LQQN V W S+
Sbjct: 469 SMVSTQIGGATQPVNMMSVAKYEMQNSPNEPKRLPTGPLSHLSSHSTLQQNPVPWHSAI- 527
Query: 1760 KVPKNGVPSSTTYVKQEPLDQLNEQQNKCQLSAPHPQGLSAFSSAHIEQGNAIPGTSMGE 1581
K K G PSS Y+KQE ++ EQ +K QLSAP QG S+F++ EQ E
Sbjct: 528 KEHKIGAPSSIPYIKQEQAEKTAEQPHKSQLSAP--QGSSSFATIQAEQE---------E 576
Query: 1580 TFEMQSSRMGFXXXXXXXXXXXXXXXXXSQLDPNFLSSCRIVSSTSPIGPGSNGKAPTRK 1401
+ S+RM F +QL+ +I S+ +P+G G N K P +K
Sbjct: 577 ITDKPSARMSFSTSTSMVPTNLVSSTMSAQLESTMPMRSQIPSTATPVGVGPNMKTPPKK 636
Query: 1400 PYFGQKRPLEALGSSPPLSSKKQKVSGPLSDQSIEQLNDVTAVSGVNLREEEEQLFSGSK 1221
GQK+PLE+LGS P SSKKQKVSG DQSIEQLNDVTAVSGVNLREEEEQLFSGSK
Sbjct: 637 SSVGQKKPLESLGSPTPPSSKKQKVSGAFLDQSIEQLNDVTAVSGVNLREEEEQLFSGSK 696
Query: 1220 EDSRVSEASRRAVQEEEDRHFLQKRPLRKKLAEIMARCDVKSISNDVERCLSLCVEERMH 1041
E+SR SEA+RR VQEEE+R LQK PL+KKLA+IM++C +K+I+NDVERCLSL VEERM
Sbjct: 697 EESRASEATRRVVQEEEERLILQKIPLQKKLAQIMSKCGIKNINNDVERCLSLSVEERMR 756
Query: 1040 GLISNLIRLSKQRVDIEKARHRALITSDVRQQIMLMN-XXXXXXXXXXXXXXXXXXKLDE 864
GLISNLIRLSKQRVDIEK RHR +ITSD+++QI+L+N KL+E
Sbjct: 757 GLISNLIRLSKQRVDIEKPRHRTVITSDIQRQILLINRKAKEEWNKKLAEEAEKLRKLNE 816
Query: 863 PEGNPGVDGDKEKDEGRVKSLKANKEDDEKXXXXXXXXXXXXXXXXXXMLSKWQLMAEQA 684
EGN G DGDK+KDE R+K+ K++KE+D+K MLSKWQLMAEQA
Sbjct: 817 AEGNSGADGDKDKDEVRLKAQKSSKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQA 876
Query: 683 RQKREGGIDVPSGSQPFNDVNHKPLSTFGR--NANQEAEKRGQSAAFATSGLSRKFGRNQ 510
RQKREGGID+ SG D++ +PLST R +Q+AE +G +A A+SG KFGR+
Sbjct: 877 RQKREGGIDMASGVLLGKDLSRRPLSTSSRITKDSQKAENKGPTAGAASSGPVGKFGRSH 936
Query: 509 VAVPQPVVVRKISIKDVIAVLEREPQMSKSTLIYQLHEKM 390
V V Q V IS+KDVIAVLEREPQMS+STLIY+L+EKM
Sbjct: 937 VVVSQTKVSPTISVKDVIAVLEREPQMSRSTLIYRLYEKM 976
>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
gi|223550816|gb|EEF52302.1| transcription initiation
factor, putative [Ricinus communis]
Length = 925
Score = 783 bits (2023), Expect = 0.0
Identities = 475/967 (49%), Positives = 589/967 (60%), Gaps = 17/967 (1%)
Frame = -1
Query: 3239 MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIEGDTSNSQPSDSDGAALXXXXXXXXX 3060
MDPSIMKLLEEDEDE+MHSGADVEAF AALNRDI GD S SQPSD+ G AL
Sbjct: 1 MDPSIMKLLEEDEDESMHSGADVEAFQAALNRDIGGDASTSQPSDT-GTALSHETNQTPS 59
Query: 3059 QLFPQWQTSSQDENANCXXXXXXXXXXXXXXSELAP--KQHASGYENQQPQIDTSQERNC 2886
WQ++ QDEN N L KQH S ENQQ + D QE +
Sbjct: 60 LPSANWQSTIQDENENAPSQQQQQQPQQQEQHSLVTELKQHESAGENQQLKNDVKQESSH 119
Query: 2885 FPLQEKQAQKDSQQWQAEAEQ----NTLQSHSSQTMDMQKSEKTPVLVREPDTTQYPNSE 2718
PL +KQ Q QQ QAE T+++ S+T M KSE PD Q P++E
Sbjct: 120 LPLHQKQPQDTVQQSQAEQAPVQTPRTIRTQISETNTMPKSE--------PDKMQIPDTE 171
Query: 2717 SQYSKLQKMSNQHPMASEQAINPMSHGKQVPFALLLPVIQPQLDKDRAMQLQTLYIKLKK 2538
SQY +Q M NQ M EQ NP + K +PF LLLP ++P LDKDR MQL+ L+ KL++
Sbjct: 172 SQYMNVQNMGNQQTMGPEQPSNPKNQFKPIPFMLLLPTLKPHLDKDRDMQLEILFNKLRR 231
Query: 2537 NEISKDVFVRHMRSLVGDQMLKMAVFKLQTQAARNSRTGPNQFPSQSQASVQQHHLKMQT 2358
N++ K+ FVR MR +VGDQ+L++AV + Q+Q G Q QSQA +QH+++M
Sbjct: 232 NQVPKEQFVRLMRGIVGDQVLRLAVEQWQSQQ------GSRQSQLQSQAFGRQHNVRMPV 285
Query: 2357 INGKQFPKPQSLAQLHQKGVPEDPSHVPSTAAQLKSVSNNASIGNNAQKSQEVEXXXXXX 2178
S S+A Q+ + S+ NA + + VE
Sbjct: 286 ------------------------SATASSAVQVLADSSYPPAEGNAHRPRGVEHLPDSH 321
Query: 2177 XXXXXXXXXXXXSTLNQEKERCTIPIXXXXXXXXXXXXXXXXXFPTYGNTGGNYPPFSGT 1998
STL+Q++ER +I + F TYG++ G + P+SGT
Sbjct: 322 GMQASQFSSPSTSTLSQDRERSSISVPGHSKQQQQHLHFPQNSFSTYGSSSGTHHPYSGT 381
Query: 1997 NVNTSSTSLNQQPHDLQMRQVPVN-----QSTGASQSVNVTSLPKFERQNSLSEQTRVQG 1833
N+NTS +S+ QPHDLQMRQ+ + Q G++ ++N+ + KFER NS+S+ +RVQ
Sbjct: 382 NINTSGSSMKTQPHDLQMRQISHSTMASTQIGGSTPTLNMVHVSKFERPNSVSDPSRVQS 441
Query: 1832 GTLSHLTNNSALQQNSVHWQSSTGKVPKNGVPSSTTYVKQEPLDQLNEQQNKCQLSAPHP 1653
G++S N SAL QNS+ WQ+ T K + + ST YVKQEPL+Q +QQ K QLS +P
Sbjct: 442 GSMSQYNNKSALPQNSIPWQAPTNKEQTSPLFPSTNYVKQEPLEQATDQQQKPQLS--NP 499
Query: 1652 QGLSAFSSAHIEQGNAIPGTSMGETFEMQSSRMGFXXXXXXXXXXXXXXXXXSQLDPNFL 1473
QGLSA A EQGNA+P S ++ E SS++GF Q DPN
Sbjct: 500 QGLSA---APGEQGNAVPVNSKEDSLEKPSSKVGFSNPSTAVPSNSVSPSIAIQPDPNIQ 556
Query: 1472 SSCRIVSSTSPIGPGSNGKAPTRKPYFGQKRPLEALGSSPPLSSKKQKVSGPLSDQSIEQ 1293
+ R S + +G N + PT+K GQK+PLEALGSSPP+SSKKQKVSG DQSIEQ
Sbjct: 557 AGPRFPSGAASVGV--NARTPTKKLSIGQKKPLEALGSSPPMSSKKQKVSGAFLDQSIEQ 614
Query: 1292 LNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRAVQEEEDRHFLQKRPLRKKLAEIMA 1113
LNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRR VQEEE+R LQK PL+KKLAEIM
Sbjct: 615 LNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRVVQEEEERLILQKTPLQKKLAEIMV 674
Query: 1112 RCDVKSISNDVERCLSLCVEERMHGLISNLIRLSKQRVDIEKARHRALITSDVRQQIMLM 933
+C +K+I+NDVERCLSLCVEERM GLIS LIRLSKQRVD EK+RHR +ITSDVRQQIM M
Sbjct: 675 KCGLKNINNDVERCLSLCVEERMRGLISTLIRLSKQRVDAEKSRHRTVITSDVRQQIMTM 734
Query: 932 NXXXXXXXXXXXXXXXXXXKLDEPEGNPGVDGDKEKDEGRVKSLK----ANKEDDEKXXX 765
N K++EPEG+ GV+GDKEKD+GRVK++K ANKE+D+K
Sbjct: 735 NQKAREEWERKQAEAEKLRKVNEPEGDNGVEGDKEKDDGRVKAIKGNIPANKEEDDKMRT 794
Query: 764 XXXXXXXXXXXXXXXMLSKWQLMAEQARQKREGGIDVPSGSQPFNDVNHKPLSTFGRNA- 588
LSKWQLMAEQARQKREGGI+ SGS +V KP T G++
Sbjct: 795 TAANVAARAAVGGDDHLSKWQLMAEQARQKREGGIEAASGSYSAKEVTRKPQFTSGKSMK 854
Query: 587 -NQEAEKRGQSAAFATSGLSRKFGRNQVAVPQPVVVRKISIKDVIAVLEREPQMSKSTLI 411
NQE EKR S A A++G+ RK GRNQ PQ V R IS+KDVIA LEREPQMSKSTLI
Sbjct: 855 DNQEPEKR--SPAAASTGV-RKVGRNQAFTPQSKVARSISVKDVIAALEREPQMSKSTLI 911
Query: 410 YQLHEKM 390
Y+L+E++
Sbjct: 912 YRLYERV 918