BLASTX nr result
ID: Cornus23_contig00005736
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00005736
(1164 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007046292.1| Phytochrome and flowering time regulatory pr... 65 1e-07
ref|XP_007046291.1| Phytochrome and flowering time regulatory pr... 65 1e-07
ref|XP_010265228.1| PREDICTED: mediator of RNA polymerase II tra... 64 2e-07
ref|XP_011021763.1| PREDICTED: mediator of RNA polymerase II tra... 64 3e-07
ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Popu... 64 3e-07
ref|XP_012463727.1| PREDICTED: mediator of RNA polymerase II tra... 63 4e-07
gb|KJB80076.1| hypothetical protein B456_013G080300 [Gossypium r... 63 4e-07
ref|XP_012463724.1| PREDICTED: mediator of RNA polymerase II tra... 63 4e-07
ref|XP_012463725.1| PREDICTED: mediator of RNA polymerase II tra... 63 4e-07
ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family prot... 63 4e-07
gb|AGM20684.1| PFT [Populus tomentosa] 62 1e-06
ref|XP_012478637.1| PREDICTED: mediator of RNA polymerase II tra... 60 3e-06
ref|XP_012478635.1| PREDICTED: mediator of RNA polymerase II tra... 60 3e-06
ref|XP_012478636.1| PREDICTED: mediator of RNA polymerase II tra... 60 3e-06
ref|XP_009616759.1| PREDICTED: mediator of RNA polymerase II tra... 60 5e-06
gb|KDO70070.1| hypothetical protein CISIN_1g003284mg [Citrus sin... 60 5e-06
gb|KDO70069.1| hypothetical protein CISIN_1g003284mg [Citrus sin... 60 5e-06
gb|KDO70068.1| hypothetical protein CISIN_1g003284mg [Citrus sin... 60 5e-06
ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II tra... 60 5e-06
ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citr... 60 5e-06
>ref|XP_007046292.1| Phytochrome and flowering time regulatory protein isoform 2
[Theobroma cacao] gi|508710227|gb|EOY02124.1|
Phytochrome and flowering time regulatory protein
isoform 2 [Theobroma cacao]
Length = 860
Score = 64.7 bits (156), Expect = 1e-07
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = -1
Query: 792 VGTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFL 679
VG+GMG YVQGP SQLVSQGQVS+Q PP MPGGGF+
Sbjct: 822 VGSGMGPAYVQGPGRSQLVSQGQVSSQAPPNMPGGGFM 859
>ref|XP_007046291.1| Phytochrome and flowering time regulatory protein isoform 1
[Theobroma cacao] gi|508710226|gb|EOY02123.1|
Phytochrome and flowering time regulatory protein
isoform 1 [Theobroma cacao]
Length = 871
Score = 64.7 bits (156), Expect = 1e-07
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = -1
Query: 792 VGTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFL 679
VG+GMG YVQGP SQLVSQGQVS+Q PP MPGGGF+
Sbjct: 833 VGSGMGPAYVQGPGRSQLVSQGQVSSQAPPNMPGGGFM 870
>ref|XP_010265228.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
[Nelumbo nucifera]
Length = 809
Score = 64.3 bits (155), Expect = 2e-07
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = -1
Query: 792 VGTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFLN 676
VG GM Q YVQGPS SQL+SQGQ+S+Q PP MPGGG+LN
Sbjct: 771 VGAGMTQAYVQGPSRSQLMSQGQISSQGPPNMPGGGYLN 809
>ref|XP_011021763.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Populus euphratica]
Length = 857
Score = 63.5 bits (153), Expect = 3e-07
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = -1
Query: 792 VGTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFLN 676
VGTGMGQTYVQGP SQLVSQGQVS+Q P M GGGF++
Sbjct: 818 VGTGMGQTYVQGPGRSQLVSQGQVSSQGPASMSGGGFMS 856
>ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Populus trichocarpa]
gi|550332870|gb|EEE88812.2| hypothetical protein
POPTR_0008s11650g [Populus trichocarpa]
Length = 896
Score = 63.5 bits (153), Expect = 3e-07
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = -1
Query: 792 VGTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFLN 676
VGTGMGQTYVQGP SQLVSQGQVS+Q P M GGGF++
Sbjct: 857 VGTGMGQTYVQGPGRSQLVSQGQVSSQGPANMSGGGFMS 895
>ref|XP_012463727.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X3 [Gossypium raimondii]
Length = 738
Score = 63.2 bits (152), Expect = 4e-07
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = -1
Query: 792 VGTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFLN 676
VG+GMG YVQGP SQLVSQGQV +Q PP MPGGGF++
Sbjct: 700 VGSGMGPAYVQGPGRSQLVSQGQVPSQAPPNMPGGGFMS 738
>gb|KJB80076.1| hypothetical protein B456_013G080300 [Gossypium raimondii]
Length = 810
Score = 63.2 bits (152), Expect = 4e-07
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = -1
Query: 792 VGTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFLN 676
VG+GMG YVQGP SQLVSQGQV +Q PP MPGGGF++
Sbjct: 772 VGSGMGPAYVQGPGRSQLVSQGQVPSQAPPNMPGGGFMS 810
>ref|XP_012463724.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X1 [Gossypium raimondii]
gi|763813222|gb|KJB80074.1| hypothetical protein
B456_013G080300 [Gossypium raimondii]
Length = 845
Score = 63.2 bits (152), Expect = 4e-07
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = -1
Query: 792 VGTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFLN 676
VG+GMG YVQGP SQLVSQGQV +Q PP MPGGGF++
Sbjct: 807 VGSGMGPAYVQGPGRSQLVSQGQVPSQAPPNMPGGGFMS 845
>ref|XP_012463725.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X2 [Gossypium raimondii]
gi|763813221|gb|KJB80073.1| hypothetical protein
B456_013G080300 [Gossypium raimondii]
Length = 822
Score = 63.2 bits (152), Expect = 4e-07
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = -1
Query: 792 VGTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFLN 676
VG+GMG YVQGP SQLVSQGQV +Q PP MPGGGF++
Sbjct: 784 VGSGMGPAYVQGPGRSQLVSQGQVPSQAPPNMPGGGFMS 822
>ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family protein [Populus
trichocarpa] gi|222864996|gb|EEF02127.1| PHYTOCHROME AND
FLOWERING TIME 1 family protein [Populus trichocarpa]
Length = 796
Score = 63.2 bits (152), Expect = 4e-07
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = -1
Query: 789 GTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFLN 676
GTGMGQTYVQGP QLVSQGQVS+Q P MPGGGF++
Sbjct: 759 GTGMGQTYVQGPGRPQLVSQGQVSSQGPANMPGGGFMS 796
>gb|AGM20684.1| PFT [Populus tomentosa]
Length = 889
Score = 61.6 bits (148), Expect = 1e-06
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = -1
Query: 789 GTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFLN 676
GTGMG+TYVQGP QLVSQGQVS+Q P MPGGGF++
Sbjct: 852 GTGMGRTYVQGPGRPQLVSQGQVSSQGPANMPGGGFMS 889
>ref|XP_012478637.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
isoform X3 [Gossypium raimondii]
Length = 726
Score = 60.1 bits (144), Expect = 3e-06
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = -1
Query: 792 VGTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFLN 676
VG+GM YVQGP SQLVSQGQVS+Q P MPGGGF++
Sbjct: 688 VGSGMNSAYVQGPGRSQLVSQGQVSSQAPSNMPGGGFMS 726
>ref|XP_012478635.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
isoform X1 [Gossypium raimondii]
Length = 840
Score = 60.1 bits (144), Expect = 3e-06
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = -1
Query: 792 VGTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFLN 676
VG+GM YVQGP SQLVSQGQVS+Q P MPGGGF++
Sbjct: 802 VGSGMNSAYVQGPGRSQLVSQGQVSSQAPSNMPGGGFMS 840
>ref|XP_012478636.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
isoform X2 [Gossypium raimondii]
gi|763763083|gb|KJB30337.1| hypothetical protein
B456_005G138200 [Gossypium raimondii]
Length = 834
Score = 60.1 bits (144), Expect = 3e-06
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = -1
Query: 792 VGTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFLN 676
VG+GM YVQGP SQLVSQGQVS+Q P MPGGGF++
Sbjct: 796 VGSGMNSAYVQGPGRSQLVSQGQVSSQAPSNMPGGGFMS 834
>ref|XP_009616759.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Nicotiana tomentosiformis]
Length = 236
Score = 59.7 bits (143), Expect = 5e-06
Identities = 27/39 (69%), Positives = 34/39 (87%)
Frame = -1
Query: 792 VGTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFLN 676
VGTG+ Q+Y+QGP+ SQL+SQGQVS+Q P MPGGGF+N
Sbjct: 198 VGTGVNQSYMQGPARSQLMSQGQVSSQGLPTMPGGGFMN 236
>gb|KDO70070.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
Length = 818
Score = 59.7 bits (143), Expect = 5e-06
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = -1
Query: 792 VGTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFLN 676
VG+GMGQ YVQGP +QLVSQGQVS+Q P +PGGGF++
Sbjct: 780 VGSGMGQGYVQGPGRTQLVSQGQVSSQGAPNIPGGGFMS 818
>gb|KDO70069.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
Length = 834
Score = 59.7 bits (143), Expect = 5e-06
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = -1
Query: 792 VGTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFLN 676
VG+GMGQ YVQGP +QLVSQGQVS+Q P +PGGGF++
Sbjct: 796 VGSGMGQGYVQGPGRTQLVSQGQVSSQGAPNIPGGGFMS 834
>gb|KDO70068.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
Length = 833
Score = 59.7 bits (143), Expect = 5e-06
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = -1
Query: 792 VGTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFLN 676
VG+GMGQ YVQGP +QLVSQGQVS+Q P +PGGGF++
Sbjct: 795 VGSGMGQGYVQGPGRTQLVSQGQVSSQGAPNIPGGGFMS 833
>ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X2 [Citrus sinensis]
Length = 829
Score = 59.7 bits (143), Expect = 5e-06
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = -1
Query: 792 VGTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFLN 676
VG+GMGQ YVQGP +QLVSQGQVS+Q P +PGGGF++
Sbjct: 791 VGSGMGQGYVQGPGRTQLVSQGQVSSQGAPNIPGGGFMS 829
>ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citrus clementina]
gi|568861864|ref|XP_006484419.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 25-like isoform
X1 [Citrus sinensis] gi|557539921|gb|ESR50965.1|
hypothetical protein CICLE_v10030710mg [Citrus
clementina]
Length = 830
Score = 59.7 bits (143), Expect = 5e-06
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = -1
Query: 792 VGTGMGQTYVQGPSWSQLVSQGQVSTQVPPGMPGGGFLN 676
VG+GMGQ YVQGP +QLVSQGQVS+Q P +PGGGF++
Sbjct: 792 VGSGMGQGYVQGPGRTQLVSQGQVSSQGAPNIPGGGFMS 830