BLASTX nr result

ID: Cornus23_contig00004899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00004899
         (2119 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012069319.1| PREDICTED: transcription initiation factor I...   705   0.0  
ref|XP_010270094.1| PREDICTED: transcription initiation factor I...   701   0.0  
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...   688   0.0  
gb|KHG13582.1| Transcription initiation factor IIF subunit alpha...   684   0.0  
ref|XP_012449917.1| PREDICTED: transcription initiation factor I...   682   0.0  
ref|XP_010057855.1| PREDICTED: transcription initiation factor I...   678   0.0  
ref|XP_010252616.1| PREDICTED: transcription initiation factor I...   675   0.0  
gb|KJB67330.1| hypothetical protein B456_010G186300 [Gossypium r...   666   0.0  
ref|XP_002322538.2| transcription initiation factor IIF alpha su...   665   0.0  
ref|XP_010057857.1| PREDICTED: transcription initiation factor I...   664   0.0  
ref|XP_011008636.1| PREDICTED: transcription initiation factor I...   664   0.0  
ref|XP_002308775.1| transcription initiation factor IIF alpha su...   662   0.0  
ref|XP_007154011.1| hypothetical protein PHAVU_003G083500g [Phas...   660   0.0  
gb|KJB67331.1| hypothetical protein B456_010G186300 [Gossypium r...   651   0.0  
ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu...   647   0.0  
ref|XP_012080961.1| PREDICTED: transcription initiation factor I...   643   0.0  
ref|XP_004152016.1| PREDICTED: transcription initiation factor I...   640   e-180
ref|XP_010538753.1| PREDICTED: transcription initiation factor I...   635   e-179
ref|XP_014506009.1| PREDICTED: transcription initiation factor I...   631   e-178
ref|XP_003594206.1| transcription initiation factor IIF subunit ...   627   e-176

>ref|XP_012069319.1| PREDICTED: transcription initiation factor IIF subunit alpha
            [Jatropha curcas] gi|802578042|ref|XP_012069320.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha [Jatropha curcas] gi|802578044|ref|XP_012069321.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha [Jatropha curcas] gi|802578046|ref|XP_012069322.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha [Jatropha curcas] gi|643733570|gb|KDP40450.1|
            hypothetical protein JCGZ_03950 [Jatropha curcas]
          Length = 533

 Score =  705 bits (1819), Expect = 0.0
 Identities = 373/538 (69%), Positives = 402/538 (74%), Gaps = 2/538 (0%)
 Frame = -2

Query: 1950 MSIDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYN 1771
            MS DL LKPSCSGCGS+++LYGSNCKH+TLCL+CGKTMAEN+GKCYDCGAT+TRLIREYN
Sbjct: 1    MSFDLMLKPSCSGCGSTQELYGSNCKHMTLCLTCGKTMAENRGKCYDCGATVTRLIREYN 60

Query: 1770 VRASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLL 1591
            VRASSSSDKNYFIGRFVTGLP+FSKK+SAENKWSL K+GLQGRQLTDALREKY+NKPW+L
Sbjct: 61   VRASSSSDKNYFIGRFVTGLPSFSKKKSAENKWSLHKDGLQGRQLTDALREKYRNKPWML 120

Query: 1590 EDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1411
            EDETGQ QYQG LEG+QSATYYLL+LQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQYQGHLEGSQSATYYLLILQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1410 KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKESGAVGRKGS-KKTAGDEEEANASDK 1234
            KNRRKTADGYQRWMMKAANNG AAFGEVEKFDDKESG  G KG  KK AGDEEE N SD+
Sbjct: 181  KNRRKTADGYQRWMMKAANNGAAAFGEVEKFDDKESGTAGGKGGRKKPAGDEEEGNVSDR 240

Query: 1233 GXXXXXXXEARKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAV 1054
                     ARKNRLGLNKRS                        DWEHEEIFTDDDEAV
Sbjct: 241  AEEDEEEEAARKNRLGLNKRSGDDDEEGLRGGDHDMDDDDSEKGDDWEHEEIFTDDDEAV 300

Query: 1053 GNDPAEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXGRAAGLNXXXXXX 874
            GNDP EREDLAPEVPAPPEIKQ                         G+AAGLN      
Sbjct: 301  GNDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKLLGKAAGLNDSDAED 360

Query: 873  XXXXXXXXXEIGLSPVLAPKQKEAPKEEPVDNSPSKPASTGAARGTPPTSKSAKGKRKTN 694
                     ++  SPVLAPKQK+APKEEPVDNSP+KP  + +A+GTP  SKSAKGKRK +
Sbjct: 361  DDDDEDMEEDV--SPVLAPKQKDAPKEEPVDNSPAKPMPSSSAKGTPSNSKSAKGKRKLS 418

Query: 693  GDD-KPSNGAPLKKVKTENDAKSAKDETXXXXXXXXXXXXXXXXXXKTGSVSSSGPVTED 517
            GDD K S+GAP KKVK END K    E                   K GS S   PVTE+
Sbjct: 419  GDDAKTSSGAPQKKVKAENDLKPTVKEEHAPTAKSSPTPKGATSSLKPGSTS---PVTEE 475

Query: 516  EIRAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQKTNGPNYVVLREK 343
            EIRAVLLQ  PVTTQDLVA+FKSRLK  EDK AFA ILRRISKIQKT+G NYVVLRE+
Sbjct: 476  EIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRISKIQKTSGSNYVVLRER 533


>ref|XP_010270094.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Nelumbo nucifera] gi|720045081|ref|XP_010270096.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha-like [Nelumbo nucifera]
          Length = 540

 Score =  701 bits (1809), Expect = 0.0
 Identities = 373/542 (68%), Positives = 403/542 (74%), Gaps = 6/542 (1%)
 Frame = -2

Query: 1950 MSIDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYN 1771
            MS DL LKPSC GCGS+ DLYGSNCKH+TLCLSCGKTMAEN GKCY+CG  +TRLIREYN
Sbjct: 1    MSSDLLLKPSCGGCGSTSDLYGSNCKHMTLCLSCGKTMAENHGKCYECGVPVTRLIREYN 60

Query: 1770 VRASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLL 1591
            VRAS +SDK YFIGRFVTG+PNFSKK++A NKWSLQKEGLQGRQ+TDALREKYKNKPWLL
Sbjct: 61   VRASPASDKTYFIGRFVTGIPNFSKKKNASNKWSLQKEGLQGRQVTDALREKYKNKPWLL 120

Query: 1590 EDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1411
            EDETGQ QY GQLEG+QSATYYLLM+QGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1410 KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKES---GAVGRKGSKKTAGDEEEANAS 1240
            KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKES   G  G +G KK  GDE+E NAS
Sbjct: 181  KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKESGGGGGGGGRGRKKATGDEDEGNAS 240

Query: 1239 DKGXXXXXXXEARKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE 1060
            D+G       EARKNRLGL K +                        DWEHEEIFTDDDE
Sbjct: 241  DRGEEDEEEEEARKNRLGLRKLAGDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDE 300

Query: 1059 AVGNDPAEREDLAPEVPAPPEIKQ-XXXXXXXXXXXXXXXXXXXXXXXXXGRAAGLNXXX 883
            AVGNDP EREDLAPEVPAPPEIKQ                          GRA GLN   
Sbjct: 301  AVGNDPEEREDLAPEVPAPPEIKQDEEDEDEANEEEGGLSKSGKELKKLLGRAGGLNDSD 360

Query: 882  XXXXXXXXXXXXEIGLSPVLAPKQKEAPKEEPVDNSPSKPASTGAARGTPPTSKSAKGKR 703
                        E+G+SPVLAPKQK++PKEEP D+SPSKP  +G+ARGTP TSKS+K KR
Sbjct: 361  AEEEEDDDDMEDEMGMSPVLAPKQKDSPKEEPADSSPSKPVPSGSARGTPSTSKSSKSKR 420

Query: 702  KTNGDD-KPSNGAPLKKVKTENDAKSA-KDETXXXXXXXXXXXXXXXXXXKTGSVSSSGP 529
            K+ GDD K  NGAP KK K EN++KS+ KDE                    TGS   +GP
Sbjct: 421  KSAGDDGKVPNGAPAKKGKFENESKSSVKDE--PTSTSRGNVPPKGSASLTTGSTPPTGP 478

Query: 528  VTEDEIRAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQKTNGPNYVVLR 349
            VTEDEIRAVLLQ  PVTTQDLVAKFK+RLKSKEDK AFA ILRRISKIQKTNG NYVVLR
Sbjct: 479  VTEDEIRAVLLQMAPVTTQDLVAKFKARLKSKEDKAAFAEILRRISKIQKTNGSNYVVLR 538

Query: 348  EK 343
            +K
Sbjct: 539  DK 540


>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|223541454|gb|EEF43004.1|
            tfiif-alpha, putative [Ricinus communis]
          Length = 533

 Score =  688 bits (1775), Expect = 0.0
 Identities = 361/536 (67%), Positives = 397/536 (74%), Gaps = 1/536 (0%)
 Frame = -2

Query: 1947 SIDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYNV 1768
            ++DL LK SCSGCGS+ DLYGSNCKH+TLCLSCGKTMAEN  KC+DCGAT++RLIREYNV
Sbjct: 3    TMDLMLKGSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHAKCFDCGATVSRLIREYNV 62

Query: 1767 RASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLLE 1588
            RASSSSDKNYFIGRFVTGLP+FSKK++AENKWSLQKEGLQGRQLTDALREKYKN+PWLLE
Sbjct: 63   RASSSSDKNYFIGRFVTGLPSFSKKKNAENKWSLQKEGLQGRQLTDALREKYKNRPWLLE 122

Query: 1587 DETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 1408
            DETGQFQYQG LEG+QSATYYLL+LQGKEFVAIPA SWYNFNKVAQYKQLTLEEAEEKM+
Sbjct: 123  DETGQFQYQGHLEGSQSATYYLLILQGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMR 182

Query: 1407 NRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKESGAVGRKGSKKTAGDEEEANASDKGX 1228
            NRRKTADGY+RWMMKAANNGPAAFGEVEK DDK+SGA   +G KK AGD+EE N SD+G 
Sbjct: 183  NRRKTADGYERWMMKAANNGPAAFGEVEKLDDKDSGAASGRGRKKAAGDDEEGNVSDRGD 242

Query: 1227 XXXXXXEARKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGN 1048
                   ARKNRLGLNKR                         DWEHEEIFTDDDEAVGN
Sbjct: 243  EDEEEEAARKNRLGLNKRGGDDDEEGPRGGDHDIDDDDIEKGDDWEHEEIFTDDDEAVGN 302

Query: 1047 DPAEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXGRAAGLNXXXXXXXX 868
            D  EREDLAPEVPAPPEIKQ                         GRA GLN        
Sbjct: 303  DREEREDLAPEVPAPPEIKQDEDDEDEENEEGGLSKSGKELKKLLGRAGGLNDSDAEDDD 362

Query: 867  XXXXXXXEIGLSPVLAPKQKEAPKEEPVDNSPSKPASTGAARGTPPTSKSAKGKRKTNGD 688
                   ++ +SPVLAPKQ   PKEEP DNSP+KP ++ +++GTP TSKSAKGKRK N D
Sbjct: 363  DDDDMDEDVSISPVLAPKQ--TPKEEPADNSPAKPMTSASSKGTPSTSKSAKGKRKLNSD 420

Query: 687  D-KPSNGAPLKKVKTENDAKSAKDETXXXXXXXXXXXXXXXXXXKTGSVSSSGPVTEDEI 511
            + K +N AP KKVKTEN+ K    E                   KTGS S   PVTE+EI
Sbjct: 421  EAKQTNVAPQKKVKTENELKPTVKEESAPTSKSSATPKAAPPSAKTGSTS---PVTEEEI 477

Query: 510  RAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQKTNGPNYVVLREK 343
            RAVLLQ  PVTTQDLVA+FKSRLKS EDK AFA ILRRISKIQKT+G +YVVLR+K
Sbjct: 478  RAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFADILRRISKIQKTSGSSYVVLRDK 533


>gb|KHG13582.1| Transcription initiation factor IIF subunit alpha -like protein
            [Gossypium arboreum]
          Length = 547

 Score =  684 bits (1765), Expect = 0.0
 Identities = 364/551 (66%), Positives = 406/551 (73%), Gaps = 15/551 (2%)
 Frame = -2

Query: 1950 MSIDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYN 1771
            MS DL LKPSCSGCGSS+DLYGSNCKH+TLC+SCGKTMAENQGKC++CGA +TRLIREYN
Sbjct: 1    MSFDLMLKPSCSGCGSSQDLYGSNCKHMTLCVSCGKTMAENQGKCFECGAIVTRLIREYN 60

Query: 1770 VRASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLL 1591
            VRAS S+DKNYFIGRF+TGLPNFSKK++AEN+WSLQK+GLQGRQ+TDALREKYKNKPWLL
Sbjct: 61   VRASPSTDKNYFIGRFMTGLPNFSKKKNAENRWSLQKDGLQGRQVTDALREKYKNKPWLL 120

Query: 1590 EDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1411
            EDETGQ QYQGQLEG+QSATYYLLM+QGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQAQYQGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1410 KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKESGAVGRKGSKKTAGDEEEANASDKG 1231
            KNRRKTADGY+RWMMKAANNG AAFGEVEK D+KE+ A G +G KK+ G+EEE + SD+G
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKIDEKETAAAGGRGRKKSTGEEEEGHVSDRG 240

Query: 1230 XXXXXXXEARKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVG 1051
                    ARKNRLGLNK+S                        DWEHEEIFTDDDEAVG
Sbjct: 241  EEDEEEEAARKNRLGLNKKSGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVG 300

Query: 1050 NDPAEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXGRAAGLNXXXXXXX 871
            NDP ER DLAPEVPAPPEIK+                         G+A+GLN       
Sbjct: 301  NDPEER-DLAPEVPAPPEIKE-DEDEEDEEQEGGLSKSGKELKKLLGKASGLNDSDADEE 358

Query: 870  XXXXXXXXEIGLSPVLAPKQKEAPKEEPVDNSPSKPASTGAARGTPPTSKSAKGKRKTNG 691
                    ++  +P  APKQK+APKEEP DNSP KPA + +ARGTP TSKS+KGKRK  G
Sbjct: 359  DDDEDVDDDMNFNPTPAPKQKDAPKEEPADNSPMKPAPSASARGTPATSKSSKGKRK--G 416

Query: 690  DD-KPSNGAPLKKVKTENDAK-------------SAKDETXXXXXXXXXXXXXXXXXXKT 553
            DD K SNG PLKKVK+E ++K             SA  +                   K 
Sbjct: 417  DDTKASNGTPLKKVKSEPESKTSVKEENTAASKGSAPSKGTSSSAKAGSTSAASASSSKA 476

Query: 552  GSVSSSGPVTEDEIRAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQKTN 373
            GS S++GPVTE+EIRAVLLQK PVTT DLVAKFK+RLKS EDK AFA ILRRISKIQKTN
Sbjct: 477  GSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQKTN 536

Query: 372  GP-NYVVLREK 343
            GP NYVVLREK
Sbjct: 537  GPNNYVVLREK 547


>ref|XP_012449917.1| PREDICTED: transcription initiation factor IIF subunit alpha
            [Gossypium raimondii] gi|823234571|ref|XP_012449918.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha [Gossypium raimondii]
            gi|823234573|ref|XP_012449919.1| PREDICTED: transcription
            initiation factor IIF subunit alpha [Gossypium raimondii]
            gi|763800373|gb|KJB67328.1| hypothetical protein
            B456_010G186300 [Gossypium raimondii]
            gi|763800374|gb|KJB67329.1| hypothetical protein
            B456_010G186300 [Gossypium raimondii]
          Length = 547

 Score =  682 bits (1760), Expect = 0.0
 Identities = 363/551 (65%), Positives = 405/551 (73%), Gaps = 15/551 (2%)
 Frame = -2

Query: 1950 MSIDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYN 1771
            MS DL LKPSCSGCGSS+DLYGSNCKH+TLC+SCGKTMAENQGKC++CGA +TRLIREYN
Sbjct: 1    MSFDLMLKPSCSGCGSSQDLYGSNCKHMTLCVSCGKTMAENQGKCFECGAIVTRLIREYN 60

Query: 1770 VRASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLL 1591
            VRAS S+DKNYFIGRF+TGLPNFSKK++AEN+WSLQK+GLQGRQ+TDALREKYKNKPWLL
Sbjct: 61   VRASPSTDKNYFIGRFMTGLPNFSKKKNAENRWSLQKDGLQGRQVTDALREKYKNKPWLL 120

Query: 1590 EDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1411
            EDETGQ QYQGQLEG+QSATYYLLM+QGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQAQYQGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1410 KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKESGAVGRKGSKKTAGDEEEANASDKG 1231
            KNRRKTADGY+RWMMKAANNG AAFGEVEK D+KE+ A G +G KK+ G+EEE + SD+G
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKIDEKETAAAGGRGRKKSTGEEEEGHVSDRG 240

Query: 1230 XXXXXXXEARKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVG 1051
                    ARKNRLGLNK+S                        DWEHEEIFTDDDEAVG
Sbjct: 241  EEDEEEEAARKNRLGLNKKSGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVG 300

Query: 1050 NDPAEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXGRAAGLNXXXXXXX 871
            NDP ER DLAPEVPAPPEIK+                         G+A+GLN       
Sbjct: 301  NDPEER-DLAPEVPAPPEIKE-DEDEEDEEQEGGLSKSGKELKKLLGKASGLNDSDADED 358

Query: 870  XXXXXXXXEIGLSPVLAPKQKEAPKEEPVDNSPSKPASTGAARGTPPTSKSAKGKRKTNG 691
                    ++  +P  APKQK+APKEEP DNSP KPA + +ARGTP  SKS+KGKRK  G
Sbjct: 359  DDDEDVDDDMNFNPTPAPKQKDAPKEEPADNSPMKPAPSASARGTPAASKSSKGKRK--G 416

Query: 690  DD-KPSNGAPLKKVKTENDAK-------------SAKDETXXXXXXXXXXXXXXXXXXKT 553
            DD K SNG PLKKVK+E ++K             SA  +                   K 
Sbjct: 417  DDTKASNGTPLKKVKSEPESKTSVKEENTSASKGSAPSKGTSSSAKAGSTSAASASSSKA 476

Query: 552  GSVSSSGPVTEDEIRAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQKTN 373
            GS S++GPVTE+EIRAVLLQK PVTT DLVAKFK+RLKS EDK AFA ILRRISKIQKTN
Sbjct: 477  GSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQKTN 536

Query: 372  GP-NYVVLREK 343
            GP NYVVLREK
Sbjct: 537  GPNNYVVLREK 547


>ref|XP_010057855.1| PREDICTED: transcription initiation factor IIF subunit alpha isoform
            X1 [Eucalyptus grandis] gi|629110049|gb|KCW75195.1|
            hypothetical protein EUGRSUZ_E03951 [Eucalyptus grandis]
          Length = 543

 Score =  678 bits (1749), Expect = 0.0
 Identities = 353/543 (65%), Positives = 395/543 (72%), Gaps = 7/543 (1%)
 Frame = -2

Query: 1950 MSIDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYN 1771
            MS DL LKP+C GCG++ DLYGSNCKH+TLC +CGK MAE++ KCY+CGAT+TRLIREYN
Sbjct: 1    MSFDLVLKPTCGGCGAAADLYGSNCKHMTLCSTCGKAMAESRAKCYECGATLTRLIREYN 60

Query: 1770 VRASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLL 1591
            VRA  SS+KNYFIGRFV+GLPNFSKK+SAEN+WS QKEGLQGRQ+TD LREKYKNKPWLL
Sbjct: 61   VRAGPSSEKNYFIGRFVSGLPNFSKKKSAENRWSAQKEGLQGRQVTDTLREKYKNKPWLL 120

Query: 1590 EDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1411
            EDETGQ QY G LEG+QSATYYLLMLQGKEF AIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQYHGHLEGSQSATYYLLMLQGKEFAAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1410 KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKE------SGAVGRKGSKKTAGDEEEA 1249
            KNR+KTADGYQRWMMKAANNG AAFGEVEK +DK+       G  G +G KKT+G+++E 
Sbjct: 181  KNRKKTADGYQRWMMKAANNGAAAFGEVEKSEDKDGSGGGSGGGGGGRGRKKTSGNDDEG 240

Query: 1248 NASDKGXXXXXXXEARKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTD 1069
            NASDKG        ARK+RLGLNKR+                        DWEHEEIFTD
Sbjct: 241  NASDKGEEDEEEEAARKSRLGLNKRAGDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTD 300

Query: 1068 DDEAVGNDPAEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXGRAAGLNX 889
            DDEAVGNDP EREDLAPE P PPEIK                          GRA+G+N 
Sbjct: 301  DDEAVGNDPHEREDLAPEAPPPPEIKDEEEEDEANEEEGGLSKSGKELKKLLGRASGVND 360

Query: 888  XXXXXXXXXXXXXXEIGLSPVLAPKQKEAPKEEPVDNSPSKPASTGAARGTPPTSKSAKG 709
                          E+G SPVLAPKQKEA KEEP + SPSKP  + +A+GTPPTSKSAKG
Sbjct: 361  SDAEEDDDDEDMEDEVGFSPVLAPKQKEALKEEPAEESPSKPTPSASAKGTPPTSKSAKG 420

Query: 708  KRKTNGDD-KPSNGAPLKKVKTENDAKSAKDETXXXXXXXXXXXXXXXXXXKTGSVSSSG 532
            KRK NGDD K SNGAP KKVKTE +AKS+  +                   K+ S   +G
Sbjct: 421  KRKLNGDDAKSSNGAPQKKVKTETEAKSSVKDESMPTSKSSVASKATQSDSKSASTPPTG 480

Query: 531  PVTEDEIRAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQKTNGPNYVVL 352
            PV E+EIRA +LQK PVTTQDLVAKFK+RLKS EDK+AFA ILRRISKIQKTNG +YVVL
Sbjct: 481  PVAEEEIRAFILQKAPVTTQDLVAKFKARLKSPEDKNAFADILRRISKIQKTNGSSYVVL 540

Query: 351  REK 343
            REK
Sbjct: 541  REK 543


>ref|XP_010252616.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Nelumbo nucifera] gi|719989360|ref|XP_010252617.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha-like [Nelumbo nucifera]
          Length = 533

 Score =  675 bits (1742), Expect = 0.0
 Identities = 359/539 (66%), Positives = 398/539 (73%), Gaps = 3/539 (0%)
 Frame = -2

Query: 1950 MSIDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYN 1771
            MS DL LKPSCSGCGS+ DLYGSNCKH+TLCLSCGK MAEN GKCY+CG  +TRLIREYN
Sbjct: 1    MSSDLLLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAENHGKCYECGVIVTRLIREYN 60

Query: 1770 VRASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLL 1591
            VRASS+SDK+YFIGRFVTG+PNFSKK++A NKWSLQKEGLQGRQ+TDALREKYKNKPWLL
Sbjct: 61   VRASSASDKSYFIGRFVTGVPNFSKKKNANNKWSLQKEGLQGRQVTDALREKYKNKPWLL 120

Query: 1590 EDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1411
            EDETGQ QY GQ+EGAQS  YYLLM+QGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQ-QYHGQIEGAQSTAYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 179

Query: 1410 KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKESGAVGRKGSKKTAGDEEEANASDKG 1231
            KNRRKTADGY+RWMMK ANNGPAAFGEVEKFDDKESG  G +G +K  GD++E   SDKG
Sbjct: 180  KNRRKTADGYERWMMKVANNGPAAFGEVEKFDDKESGGGGGRGRRKATGDDDEGKVSDKG 239

Query: 1230 XXXXXXXEARKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVG 1051
                   EARK RLGL K                          DWEHEEIFTDDDEAVG
Sbjct: 240  EEDEEEEEARKTRLGLRK-GGGDDDEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVG 298

Query: 1050 NDPAEREDLAPEVPAPPEIKQ-XXXXXXXXXXXXXXXXXXXXXXXXXGRAAGLNXXXXXX 874
            NDP EREDLAPEVPAPPEIKQ                          GRA GLN      
Sbjct: 299  NDPEEREDLAPEVPAPPEIKQDEEDEDEANEEEGGLSKSGKELKKLLGRAGGLNDSDAED 358

Query: 873  XXXXXXXXXEIGLSPVLAPKQKEAPKEEPVDNSPSKPASTGAARGTPPTSKSAKGKRKTN 694
                     E GLSPVLAPK+K+APKEEP +++PSKP S+G ARGTP TSKSAK KRK+ 
Sbjct: 359  DDDDEDVEDEFGLSPVLAPKKKDAPKEEPAESNPSKPLSSGTARGTPSTSKSAKAKRKSG 418

Query: 693  GDD-KPSNGAPLKKVKTENDAKSA-KDETXXXXXXXXXXXXXXXXXXKTGSVSSSGPVTE 520
            GDD K +NGAP KK K EN++KS+ KDE                    +GS + +GPVTE
Sbjct: 419  GDDGKVANGAPSKKGKFENESKSSLKDE----PMSTSRCSAPQKALASSGSTAPTGPVTE 474

Query: 519  DEIRAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQKTNGPNYVVLREK 343
            DEIRAVLL  + +TTQDLVAKFK+RLK KEDK AFAAI+RRISKIQK+NG N++VLR+K
Sbjct: 475  DEIRAVLLATSHLTTQDLVAKFKARLKLKEDKSAFAAIVRRISKIQKSNGSNWIVLRDK 533


>gb|KJB67330.1| hypothetical protein B456_010G186300 [Gossypium raimondii]
          Length = 540

 Score =  666 bits (1719), Expect = 0.0
 Identities = 358/551 (64%), Positives = 401/551 (72%), Gaps = 15/551 (2%)
 Frame = -2

Query: 1950 MSIDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYN 1771
            MS DL LKPSCSGCGSS+DLYGSNCKH+TLC+SCGKTMAENQGKC++CGA +TRLIREYN
Sbjct: 1    MSFDLMLKPSCSGCGSSQDLYGSNCKHMTLCVSCGKTMAENQGKCFECGAIVTRLIREYN 60

Query: 1770 VRASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLL 1591
            VRAS S+DKNYFIGRF+TGLPNFSKK++AEN+WSLQK+GLQGRQ+TDALREKYKNKPWLL
Sbjct: 61   VRASPSTDKNYFIGRFMTGLPNFSKKKNAENRWSLQKDGLQGRQVTDALREKYKNKPWLL 120

Query: 1590 EDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1411
            EDETGQ QYQGQLEG+QSATYYLLM+QGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQAQYQGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1410 KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKESGAVGRKGSKKTAGDEEEANASDKG 1231
            KNRRKTADGY+RWMMKAANNG AAFGEVEK D+KE+ A G +G KK+ G+EEE + SD+G
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKIDEKETAAAGGRGRKKSTGEEEEGHVSDRG 240

Query: 1230 XXXXXXXEARKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVG 1051
                    ARKNRLGLNK+S                            +EIFTDDDEAVG
Sbjct: 241  EEDEEEEAARKNRLGLNKKSGDDDEEGPRGGDLDMDDDDI-------EKEIFTDDDEAVG 293

Query: 1050 NDPAEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXGRAAGLNXXXXXXX 871
            NDP ER DLAPEVPAPPEIK+                         G+A+GLN       
Sbjct: 294  NDPEER-DLAPEVPAPPEIKE-DEDEEDEEQEGGLSKSGKELKKLLGKASGLNDSDADED 351

Query: 870  XXXXXXXXEIGLSPVLAPKQKEAPKEEPVDNSPSKPASTGAARGTPPTSKSAKGKRKTNG 691
                    ++  +P  APKQK+APKEEP DNSP KPA + +ARGTP  SKS+KGKRK  G
Sbjct: 352  DDDEDVDDDMNFNPTPAPKQKDAPKEEPADNSPMKPAPSASARGTPAASKSSKGKRK--G 409

Query: 690  DD-KPSNGAPLKKVKTENDAK-------------SAKDETXXXXXXXXXXXXXXXXXXKT 553
            DD K SNG PLKKVK+E ++K             SA  +                   K 
Sbjct: 410  DDTKASNGTPLKKVKSEPESKTSVKEENTSASKGSAPSKGTSSSAKAGSTSAASASSSKA 469

Query: 552  GSVSSSGPVTEDEIRAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQKTN 373
            GS S++GPVTE+EIRAVLLQK PVTT DLVAKFK+RLKS EDK AFA ILRRISKIQKTN
Sbjct: 470  GSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQKTN 529

Query: 372  GP-NYVVLREK 343
            GP NYVVLREK
Sbjct: 530  GPNNYVVLREK 540


>ref|XP_002322538.2| transcription initiation factor IIF alpha subunit family protein
            [Populus trichocarpa] gi|550320589|gb|EEF04299.2|
            transcription initiation factor IIF alpha subunit family
            protein [Populus trichocarpa]
          Length = 540

 Score =  665 bits (1715), Expect = 0.0
 Identities = 356/542 (65%), Positives = 397/542 (73%), Gaps = 6/542 (1%)
 Frame = -2

Query: 1950 MSIDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYN 1771
            MS DL LKPSCSGCGS+ DLYGSNCKH+TLCL+CGKTMAEN+GKC+DCG T++RLIREYN
Sbjct: 1    MSFDLLLKPSCSGCGSTTDLYGSNCKHMTLCLNCGKTMAENRGKCFDCGTTVSRLIREYN 60

Query: 1770 VRASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLL 1591
            VRAS+SSDKNYFIGRFVTGLP+FSKK++AENKWSL KEG+ GRQ+TDALREK+KNKPWLL
Sbjct: 61   VRASTSSDKNYFIGRFVTGLPSFSKKKNAENKWSLHKEGILGRQITDALREKFKNKPWLL 120

Query: 1590 EDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSW--YNFNKVAQYKQLTLEEAEE 1417
            EDETGQ QYQG LEG+QSATYYLLM+ GKEFVAIPAGSW  YNFNKVA YKQLTLEEAEE
Sbjct: 121  EDETGQSQYQGHLEGSQSATYYLLMMTGKEFVAIPAGSWYVYNFNKVAHYKQLTLEEAEE 180

Query: 1416 KMKNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKES-GAVGRKGSKKTAGDEEEANAS 1240
            KMKNRRKTADGY+RWMMKAANNG AAFGEVEK DDKE   A GR G +K +GD++E N S
Sbjct: 181  KMKNRRKTADGYERWMMKAANNGAAAFGEVEKVDDKEGVSAGGRGGRRKASGDDDEGNVS 240

Query: 1239 DKGXXXXXXXEARKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE 1060
            D+G         RK+RLGLNK+                         DWEHEEIFTDDDE
Sbjct: 241  DRGEEDEEEEAGRKSRLGLNKQGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDE 300

Query: 1059 AVGNDPAEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXGRAAGLNXXXX 880
            AV  DP EREDLAPEVPAPPEIKQ                         G+A GLN    
Sbjct: 301  AVAIDPEEREDLAPEVPAPPEIKQDEDDEDEENEEGGLSKSGKELKKLLGKANGLNESDV 360

Query: 879  XXXXXXXXXXXEIGLSPVLAPKQKE-APKEEPVDNSPSKPASTGAARGTPPTSKSAKGKR 703
                       +I  SPVLAPKQK+  PKEE  D SP+KP  +G+A+GTP TSKSAKGKR
Sbjct: 361  EDDDDDEDMDDDI--SPVLAPKQKDVVPKEEAADISPAKPTPSGSAKGTPSTSKSAKGKR 418

Query: 702  KTNGDD-KPSNGAPLKKVKTENDAKSAKDETXXXXXXXXXXXXXXXXXXKTGSVS-SSGP 529
            K NG+D K SNGAP+KKVKTEN+ K A  E                   KTGS S S+GP
Sbjct: 419  KLNGEDAKSSNGAPVKKVKTENEVKPAVKEESSPATKGTATPKVTPPSSKTGSTSGSTGP 478

Query: 528  VTEDEIRAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQKTNGPNYVVLR 349
            VTE+EIRAVLLQ  PVTTQDLVA+FKSRL++ EDK AFA ILRRISKIQKT+G NYVVLR
Sbjct: 479  VTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNYVVLR 538

Query: 348  EK 343
            +K
Sbjct: 539  DK 540


>ref|XP_010057857.1| PREDICTED: transcription initiation factor IIF subunit alpha isoform
            X2 [Eucalyptus grandis] gi|629110050|gb|KCW75196.1|
            hypothetical protein EUGRSUZ_E03951 [Eucalyptus grandis]
          Length = 538

 Score =  664 bits (1714), Expect = 0.0
 Identities = 349/543 (64%), Positives = 391/543 (72%), Gaps = 7/543 (1%)
 Frame = -2

Query: 1950 MSIDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYN 1771
            MS DL LKP+C GCG++ DLYGSNCKH+TLC +CGK MAE++ KCY+CGAT+TRLIREYN
Sbjct: 1    MSFDLVLKPTCGGCGAAADLYGSNCKHMTLCSTCGKAMAESRAKCYECGATLTRLIREYN 60

Query: 1770 VRASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLL 1591
            VRA  SS+KNYFIGRFV+GLPNFSKK+SAEN+WS QKEGLQGRQ+TD LREKYKNKPWLL
Sbjct: 61   VRAGPSSEKNYFIGRFVSGLPNFSKKKSAENRWSAQKEGLQGRQVTDTLREKYKNKPWLL 120

Query: 1590 EDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1411
            EDETGQ QY G LEG+QSATYYLLMLQGKEF AIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQYHGHLEGSQSATYYLLMLQGKEFAAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1410 KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKE------SGAVGRKGSKKTAGDEEEA 1249
            KNR+KTADGYQRWMMKAANNG AAFGEVEK +DK+       G  G +G KKT+G+++E 
Sbjct: 181  KNRKKTADGYQRWMMKAANNGAAAFGEVEKSEDKDGSGGGSGGGGGGRGRKKTSGNDDEG 240

Query: 1248 NASDKGXXXXXXXEARKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTD 1069
            NASDKG        ARK+RLGLNKR+                        DWEHEEIFTD
Sbjct: 241  NASDKGEEDEEEEAARKSRLGLNKRAGDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTD 300

Query: 1068 DDEAVGNDPAEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXGRAAGLNX 889
            DDEAVGNDP EREDLAPE P PPEIK                          GRA+G+N 
Sbjct: 301  DDEAVGNDPHEREDLAPEAPPPPEIKDEEEEDEANEEEGGLSKSGKELKKLLGRASGVND 360

Query: 888  XXXXXXXXXXXXXXEIGLSPVLAPKQKEAPKEEPVDNSPSKPASTGAARGTPPTSKSAKG 709
                          E+G SPVLAPKQKEA KEEP + SPSKP  + +A+GTPPTSKSAKG
Sbjct: 361  SDAEEDDDDEDMEDEVGFSPVLAPKQKEALKEEPAEESPSKPTPSASAKGTPPTSKSAKG 420

Query: 708  KRKTNGDD-KPSNGAPLKKVKTENDAKSAKDETXXXXXXXXXXXXXXXXXXKTGSVSSSG 532
            KRK NGDD K SNGAP KK     +AKS+  +                   K+ S   +G
Sbjct: 421  KRKLNGDDAKSSNGAPQKK-----EAKSSVKDESMPTSKSSVASKATQSDSKSASTPPTG 475

Query: 531  PVTEDEIRAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQKTNGPNYVVL 352
            PV E+EIRA +LQK PVTTQDLVAKFK+RLKS EDK+AFA ILRRISKIQKTNG +YVVL
Sbjct: 476  PVAEEEIRAFILQKAPVTTQDLVAKFKARLKSPEDKNAFADILRRISKIQKTNGSSYVVL 535

Query: 351  REK 343
            REK
Sbjct: 536  REK 538


>ref|XP_011008636.1| PREDICTED: transcription initiation factor IIF subunit alpha [Populus
            euphratica]
          Length = 539

 Score =  664 bits (1712), Expect = 0.0
 Identities = 352/540 (65%), Positives = 392/540 (72%), Gaps = 4/540 (0%)
 Frame = -2

Query: 1950 MSIDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYN 1771
            MS DLQL+PSCSGCGS+ DLYGSNCKH+TLCL+CGK MAEN+GKC+DCGA +TRLIREYN
Sbjct: 1    MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKAMAENRGKCFDCGAIVTRLIREYN 60

Query: 1770 VRASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLL 1591
            VRAS+SS+KNYFIGRFVTGLP FSKK++AENKWSL KEG+ GRQ+TD LREK+KNKPWLL
Sbjct: 61   VRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLL 120

Query: 1590 EDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1411
            EDETGQFQYQG LEG+QSATYYLLM+ GKEFVAIPAGSWYNFNKVA YKQLTLEEAEEKM
Sbjct: 121  EDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYNFNKVAHYKQLTLEEAEEKM 180

Query: 1410 KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKESGAVGRKGSKKTA-GDEEEANASDK 1234
            KNRRKTADGY+RWMMKAA+NG AAFGEVEK DDK+  + G KG +K A GD++E N SDK
Sbjct: 181  KNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGKGGRKKANGDDDEGNVSDK 240

Query: 1233 GXXXXXXXEARKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAV 1054
            G         RK+RLGLNK                          DWEHEEIFTDDDEAV
Sbjct: 241  GEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAV 300

Query: 1053 GNDPAEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXGRAAGLNXXXXXX 874
              DP EREDLAPEVPAPPEIKQ                         G+A GLN      
Sbjct: 301  AIDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKLLGKANGLNESDAED 360

Query: 873  XXXXXXXXXEIGLSPVLAPKQKEA-PKEEPVDNSPSKPASTGAARGTPPTSKSAKGKRKT 697
                         SPVLAPKQK+A PKEEP DNSP+KP   G+A+GTP TSKSAKGKRK 
Sbjct: 361  DDDDDDMDD--DSSPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKRKL 418

Query: 696  NGDD-KPSNGAPLKKVKTENDAKSAKDETXXXXXXXXXXXXXXXXXXKTGSVS-SSGPVT 523
            N DD K SNGAP+KKVKTEN+ K    E                   KTG  S ++GPVT
Sbjct: 419  NADDAKTSNGAPVKKVKTENEVKPTVKEESSPATKGTATPKAMPSSSKTGPTSGATGPVT 478

Query: 522  EDEIRAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQKTNGPNYVVLREK 343
            E+EIRAVLLQ  PVTTQDLVA+FKSRL++ EDK AFA ILRRISKIQKT+G N+VVLR+K
Sbjct: 479  EEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLRDK 538


>ref|XP_002308775.1| transcription initiation factor IIF alpha subunit family protein
            [Populus trichocarpa] gi|222854751|gb|EEE92298.1|
            transcription initiation factor IIF alpha subunit family
            protein [Populus trichocarpa]
          Length = 541

 Score =  662 bits (1709), Expect = 0.0
 Identities = 355/542 (65%), Positives = 393/542 (72%), Gaps = 6/542 (1%)
 Frame = -2

Query: 1950 MSIDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYN 1771
            MS DLQL+PSCSGCGS+ DLYGSNCKH+TLCL+CGKTMAEN+GKC+DCGA +TRLIREYN
Sbjct: 1    MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYN 60

Query: 1770 VRASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLL 1591
            VRAS+SS+KNYFIGRFVTGLP FSKK++AENKWSL KEG+ GRQ+TD LREK+KNKPWLL
Sbjct: 61   VRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLL 120

Query: 1590 EDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSW--YNFNKVAQYKQLTLEEAEE 1417
            EDETGQFQYQG LEG+QSATYYLLM+ GKEFVAIPAGSW  YNFNKVA YKQLTLEEAEE
Sbjct: 121  EDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQLTLEEAEE 180

Query: 1416 KMKNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKES-GAVGRKGSKKTAGDEEEANAS 1240
            KMKNRRKTADGY+RWMMKAA+NG AAFGEVEK DDK+   A GR G KK  GD++E N S
Sbjct: 181  KMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVS 240

Query: 1239 DKGXXXXXXXEARKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE 1060
            DKG         RK+RLGLNK                          DWEHEEIFTDDDE
Sbjct: 241  DKGEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDE 300

Query: 1059 AVGNDPAEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXGRAAGLNXXXX 880
            AV  DP EREDLAPEVPAPPEIKQ                         G+A GLN    
Sbjct: 301  AVAIDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKLLGKANGLNESDA 360

Query: 879  XXXXXXXXXXXEIGLSPVLAPKQKEA-PKEEPVDNSPSKPASTGAARGTPPTSKSAKGKR 703
                       +I  SPVLAPKQK+A PKEEP DNSP+KP   G+A+GTP TSKSAKGKR
Sbjct: 361  EDDDDDDDMDDDI--SPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKR 418

Query: 702  KTNGDD-KPSNGAPLKKVKTENDAKSAKDETXXXXXXXXXXXXXXXXXXKTGSVSS-SGP 529
            K N DD K SNGAP+KKVKTEN+ K    E                   KTG  S  +GP
Sbjct: 419  KLNADDAKTSNGAPVKKVKTENEVKPTVKEESSPATKGTATPKIMPSSSKTGPTSGPTGP 478

Query: 528  VTEDEIRAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQKTNGPNYVVLR 349
            VTE+EIRAVLLQ  PVTTQDLVA+FKSRL++ EDK AFA ILRRISKIQKT+G N+VVLR
Sbjct: 479  VTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLR 538

Query: 348  EK 343
            +K
Sbjct: 539  DK 540


>ref|XP_007154011.1| hypothetical protein PHAVU_003G083500g [Phaseolus vulgaris]
            gi|561027365|gb|ESW26005.1| hypothetical protein
            PHAVU_003G083500g [Phaseolus vulgaris]
          Length = 540

 Score =  660 bits (1704), Expect = 0.0
 Identities = 343/540 (63%), Positives = 391/540 (72%), Gaps = 4/540 (0%)
 Frame = -2

Query: 1950 MSIDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYN 1771
            MSIDL LKP+C GCGS+ DLYGSNCKH+TLCL+CGKTMAEN+ KC+DCGAT+TRLIREY+
Sbjct: 1    MSIDLLLKPTCGGCGSTTDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGATVTRLIREYS 60

Query: 1770 VRASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLL 1591
            VRASS SDK+YFIGRFV+GLP+FSKK+SAENKWSLQKEGLQ RQ+TDALREKYKNKPWLL
Sbjct: 61   VRASSGSDKHYFIGRFVSGLPDFSKKKSAENKWSLQKEGLQSRQVTDALREKYKNKPWLL 120

Query: 1590 EDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1411
            EDETGQ Q+QG LEGAQSATYYLLM++ KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQFQGHLEGAQSATYYLLMMERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1410 KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKESGAVGRKGSKKTAGDEEEANASDKG 1231
            KNR+KTADGY+RWMMKAANNGPAAFGE  +FD+KES   G   ++K   ++EE + SDKG
Sbjct: 181  KNRKKTADGYERWMMKAANNGPAAFGERGRFDEKESNVGGGGKNRKKTDEDEEGHVSDKG 240

Query: 1230 XXXXXXXEARKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVG 1051
                    AR++RLGLNK+                         DWEHEEIFTDDDEAVG
Sbjct: 241  EEDEDDEVARRSRLGLNKKGGDDDEEGPRGGDLDQDDDDIEKGDDWEHEEIFTDDDEAVG 300

Query: 1050 NDPAEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXGRAAGLNXXXXXXX 871
            NDP EREDLAPEVPAPPEIKQ                          R +GLN       
Sbjct: 301  NDPEEREDLAPEVPAPPEIKQDDEDEDEDNEEGGGLSKSGKELKKLLRTSGLNESDAEDD 360

Query: 870  XXXXXXXXEIGLSPVLAPKQKEAPKEEPVDNSPSKPASTGAARGTPPTSKSAKGKRKTNG 691
                    E G+ PV+A K K+APKEEP DNSPSKPA TG ARGT  TSK +KGKRK N 
Sbjct: 361  DDDDDVDDEAGVPPVIASKPKDAPKEEPADNSPSKPAVTGTARGTLSTSKPSKGKRKLNE 420

Query: 690  DDKPSNGAPLKKVKTENDAKS-AKDETXXXXXXXXXXXXXXXXXXKTGSVSS---SGPVT 523
            + K +NGAP KKVK EN+ KS  KDE                     G  SS   SGPV+
Sbjct: 421  ETKAANGAPPKKVKIENEPKSTVKDENGSTSKNNTPSKGVPPTPSSKGGSSSPIASGPVS 480

Query: 522  EDEIRAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQKTNGPNYVVLREK 343
            E+EIRAVL+QKTP+TTQDLVAKF++RL+  EDK AFA IL+RISKIQKTN  +YV+LR++
Sbjct: 481  EEEIRAVLMQKTPLTTQDLVAKFRARLRCPEDKKAFADILKRISKIQKTNASSYVILRDR 540


>gb|KJB67331.1| hypothetical protein B456_010G186300 [Gossypium raimondii]
          Length = 532

 Score =  651 bits (1679), Expect = 0.0
 Identities = 353/554 (63%), Positives = 398/554 (71%), Gaps = 18/554 (3%)
 Frame = -2

Query: 1950 MSIDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYN 1771
            MS DL LKPSCSGCGSS+DLYGSNCKH+TLC+SCGKTMAENQGKC++CGA +TRLIREYN
Sbjct: 1    MSFDLMLKPSCSGCGSSQDLYGSNCKHMTLCVSCGKTMAENQGKCFECGAIVTRLIREYN 60

Query: 1770 VRASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLL 1591
            VRAS S+DKNYFIGRF+TGLPNFSKK++AEN+WSLQK+GLQGRQ+TDALREKYKNKPWLL
Sbjct: 61   VRASPSTDKNYFIGRFMTGLPNFSKKKNAENRWSLQKDGLQGRQVTDALREKYKNKPWLL 120

Query: 1590 EDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1411
            EDETGQ QYQGQLEG+QSATYYLLM+QGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQAQYQGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1410 KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKESGAVGRKGSKKTAGDEEEANASDKG 1231
            KNRRKTADGY+RWMMKAANNG AAFGEVEK D+KE+ A G +G KK+ G+EEE + SD+G
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKIDEKETAAAGGRGRKKSTGEEEEGHVSDRG 240

Query: 1230 XXXXXXXEARKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE--- 1060
                    ARKNRLGLNK+S                             ++  DDD+   
Sbjct: 241  EEDEEEEAARKNRLGLNKKSGDDDEEGPRGG------------------DLDMDDDDIEK 282

Query: 1059 AVGNDPAEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXGRAAGLNXXXX 880
            AVGNDP ER DLAPEVPAPPEIK+                         G+A+GLN    
Sbjct: 283  AVGNDPEER-DLAPEVPAPPEIKE-DEDEEDEEQEGGLSKSGKELKKLLGKASGLNDSDA 340

Query: 879  XXXXXXXXXXXEIGLSPVLAPKQKEAPKEEPVDNSPSKPASTGAARGTPPTSKSAKGKRK 700
                       ++  +P  APKQK+APKEEP DNSP KPA + +ARGTP  SKS+KGKRK
Sbjct: 341  DEDDDDEDVDDDMNFNPTPAPKQKDAPKEEPADNSPMKPAPSASARGTPAASKSSKGKRK 400

Query: 699  TNGDD-KPSNGAPLKKVKTENDAK-------------SAKDETXXXXXXXXXXXXXXXXX 562
              GDD K SNG PLKKVK+E ++K             SA  +                  
Sbjct: 401  --GDDTKASNGTPLKKVKSEPESKTSVKEENTSASKGSAPSKGTSSSAKAGSTSAASASS 458

Query: 561  XKTGSVSSSGPVTEDEIRAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQ 382
             K GS S++GPVTE+EIRAVLLQK PVTT DLVAKFK+RLKS EDK AFA ILRRISKIQ
Sbjct: 459  SKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQ 518

Query: 381  KTNGP-NYVVLREK 343
            KTNGP NYVVLREK
Sbjct: 519  KTNGPNNYVVLREK 532


>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
            gi|550335193|gb|ERP58675.1| hypothetical protein
            POPTR_0006s01070g [Populus trichocarpa]
          Length = 536

 Score =  647 bits (1668), Expect = 0.0
 Identities = 350/542 (64%), Positives = 388/542 (71%), Gaps = 6/542 (1%)
 Frame = -2

Query: 1950 MSIDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYN 1771
            MS DLQL+PSCSGCGS+ DLYGSNCKH+TLCL+CGKTMAEN+GKC+DCGA +TRLIREYN
Sbjct: 1    MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYN 60

Query: 1770 VRASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLL 1591
            VRAS+SS+KNYFIGRFVTGLP FSKK++AENKWSL KEG+ GRQ+TD LREK+KNKPWLL
Sbjct: 61   VRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLL 120

Query: 1590 EDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSW--YNFNKVAQYKQLTLEEAEE 1417
            EDETGQFQYQG LEG+QSATYYLLM+ GKEFVAIPAGSW  YNFNKVA YKQLTLEEAEE
Sbjct: 121  EDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQLTLEEAEE 180

Query: 1416 KMKNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKES-GAVGRKGSKKTAGDEEEANAS 1240
            KMKNRRKTADGY+RWMMKAA+NG AAFGEVEK DDK+   A GR G KK  GD++E N S
Sbjct: 181  KMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVS 240

Query: 1239 DKGXXXXXXXEARKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE 1060
            DKG         RK+RLGLNK                          DWEHEEIFTDDDE
Sbjct: 241  DKGEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDE 300

Query: 1059 AVGNDPAEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXGRAAGLNXXXX 880
            AV  DP EREDLAPEVPAPPEIKQ                         G+A GLN    
Sbjct: 301  AVAIDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKLLGKANGLNESDA 360

Query: 879  XXXXXXXXXXXEIGLSPVLAPKQKEA-PKEEPVDNSPSKPASTGAARGTPPTSKSAKGKR 703
                       +I  SPVLAPKQK+A PKEEP DNSP+KP   G+A+GTP TSKSAKGKR
Sbjct: 361  EDDDDDDDMDDDI--SPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKR 418

Query: 702  KTNGDD-KPSNGAPLKKVKTENDAKSAKDETXXXXXXXXXXXXXXXXXXKTGSVSS-SGP 529
            K N DD K SNGAP+KK     + K    E                   KTG  S  +GP
Sbjct: 419  KLNADDAKTSNGAPVKK-----EVKPTVKEESSPATKGTATPKIMPSSSKTGPTSGPTGP 473

Query: 528  VTEDEIRAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQKTNGPNYVVLR 349
            VTE+EIRAVLLQ  PVTTQDLVA+FKSRL++ EDK AFA ILRRISKIQKT+G N+VVLR
Sbjct: 474  VTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLR 533

Query: 348  EK 343
            +K
Sbjct: 534  DK 535


>ref|XP_012080961.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Jatropha curcas] gi|643719802|gb|KDP30477.1|
            hypothetical protein JCGZ_16156 [Jatropha curcas]
          Length = 530

 Score =  643 bits (1659), Expect = 0.0
 Identities = 336/535 (62%), Positives = 382/535 (71%), Gaps = 1/535 (0%)
 Frame = -2

Query: 1950 MSIDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYN 1771
            MS DL LKPSCSGCGS+ DLYGSNCKH+TLCL+CGKTMAEN  KCYDCG TITRLIREYN
Sbjct: 1    MSFDLLLKPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENLEKCYDCGVTITRLIREYN 60

Query: 1770 VRASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLL 1591
            VRAS  +DKNYFIGRFVTGLP+FS+K++A++KWS+ KEGLQGRQLTDALREKYKN+PWLL
Sbjct: 61   VRASPITDKNYFIGRFVTGLPSFSRKKNADSKWSIHKEGLQGRQLTDALREKYKNRPWLL 120

Query: 1590 EDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1411
            EDETGQ QYQG LEG+QSATYYLL+LQGKEFVAIPAGSWYNFNKVA YKQLTLEEAEEKM
Sbjct: 121  EDETGQSQYQGHLEGSQSATYYLLILQGKEFVAIPAGSWYNFNKVAHYKQLTLEEAEEKM 180

Query: 1410 KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKESGAVGRKGSKKTAGDEEEANASDKG 1231
            KNRRKTADGY+RWMMKAANNG AAFGEVEKFDDK+SG  G KG +KTAGD+E  N SDKG
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKFDDKDSGTAGGKGRRKTAGDDEGGNVSDKG 240

Query: 1230 XXXXXXXEARKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVG 1051
                    ARKNRLGL +                          DWEHEEIFTDDDEAVG
Sbjct: 241  EEVEEEETARKNRLGLRRFDGDDEEEGQKGSDHDMDDDDGEKGDDWEHEEIFTDDDEAVG 300

Query: 1050 NDPAEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXGRAAGLNXXXXXXX 871
            NDP EREDLAPE+PAPPEIKQ                         G+A GL+       
Sbjct: 301  NDPEEREDLAPELPAPPEIKQDEDDEGEENEEGGLSKSGKELKKLLGKAGGLSDSDDDDD 360

Query: 870  XXXXXXXXEIGLSPVLAPKQKEAPKEEPVDNSPSKPASTGAARGTPPTSKSAKGKRKTNG 691
                          VLAPK+K+ PKEEP +++ +K   +G+A+G    SKSAKGKRK+NG
Sbjct: 361  DDMDDEI------SVLAPKKKDTPKEEPTESNHAKSMPSGSAKGNQSASKSAKGKRKSNG 414

Query: 690  DD-KPSNGAPLKKVKTENDAKSAKDETXXXXXXXXXXXXXXXXXXKTGSVSSSGPVTEDE 514
            DD K SN  P KKVK EN+ K    E                   KT S SS GPV+E+E
Sbjct: 415  DDAKTSNSVPQKKVKAENELKHTVKEESVAATKSNVTSKVVPSSLKTESTSSIGPVSEEE 474

Query: 513  IRAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQKTNGPNYVVLR 349
            IRAVL Q  PVTTQ+LV++FK++LK ++DK+AFAA L+RIS+IQKTN  +YVVLR
Sbjct: 475  IRAVLSQNGPVTTQELVSRFKAKLKCRQDKEAFAATLKRISRIQKTNESSYVVLR 529


>ref|XP_004152016.1| PREDICTED: transcription initiation factor IIF subunit alpha isoform
            X1 [Cucumis sativus] gi|778682060|ref|XP_011651638.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha isoform X1 [Cucumis sativus]
            gi|778682063|ref|XP_011651639.1| PREDICTED: transcription
            initiation factor IIF subunit alpha isoform X1 [Cucumis
            sativus] gi|700203204|gb|KGN58337.1| hypothetical protein
            Csa_3G624050 [Cucumis sativus]
          Length = 538

 Score =  640 bits (1652), Expect = e-180
 Identities = 342/539 (63%), Positives = 389/539 (72%), Gaps = 4/539 (0%)
 Frame = -2

Query: 1950 MSIDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYN 1771
            MS DL LK SCSGCGS+ +LYGSNCKH+TLCL+CGKTMAEN+GKCYDCGAT+TRLIREYN
Sbjct: 1    MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60

Query: 1770 VRASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLL 1591
            VRAS+S+DKNYFIGRF++GLPNFSKK++AENKWSL KEGLQGRQL+DALREKYKN+PWLL
Sbjct: 61   VRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120

Query: 1590 EDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1411
            EDETGQFQ+QG LEG+QSATYYLL+LQGKEF AIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1410 KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKESGAVGRKGSKKTAGDEEEANASDKG 1231
            KNR+KTADGY+RWMMKAA+NGPAAFGEVEKFDDKE+     +G +KT GDE E N SD+G
Sbjct: 181  KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRG 240

Query: 1230 XXXXXXXEARKNRLGLNKR--SXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEA 1057
                    ARKNRLGL+K+                           DWEHEEIFTDDDE 
Sbjct: 241  EEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET 300

Query: 1056 VGNDPAEREDLAPEVPAPPEIKQ-XXXXXXXXXXXXXXXXXXXXXXXXXGRAAGLNXXXX 880
               D  EREDLAPEVPAPPEIKQ                           R  GLN    
Sbjct: 301  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG 360

Query: 879  XXXXXXXXXXXEIGLSPVLAPKQKEAPKEEPVDNSPSKPASTGAARGTPPTSKSAKGKRK 700
                       + G +PVL  KQK+  KEE   NSPSKP  +G+A+GTP T+K+AKGKRK
Sbjct: 361  EDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK 420

Query: 699  TNGDDKPSNGAPLKKVKTENDAKSAKDETXXXXXXXXXXXXXXXXXXKTGSVSSSGPVTE 520
               D KPS+ AP KK+KTE ++K A DE                   KT   S SGPVTE
Sbjct: 421  NGEDVKPSS-APPKKMKTETESK-ATDE--GVPTSKSTASKGAPASVKTEPSSHSGPVTE 476

Query: 519  DEIRAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQKTN-GPNYVVLRE 346
            +EIRAVL Q+TPVTTQDLVAKFK+RL++ EDK+AFA ILRRIS+IQKTN GP+YVVLR+
Sbjct: 477  EEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRK 535


>ref|XP_010538753.1| PREDICTED: transcription initiation factor IIF subunit alpha isoform
            X1 [Tarenaya hassleriana]
            gi|729337060|ref|XP_010538754.1| PREDICTED: transcription
            initiation factor IIF subunit alpha isoform X1 [Tarenaya
            hassleriana] gi|729337063|ref|XP_010538755.1| PREDICTED:
            transcription initiation factor IIF subunit alpha isoform
            X1 [Tarenaya hassleriana]
          Length = 544

 Score =  635 bits (1637), Expect = e-179
 Identities = 340/547 (62%), Positives = 391/547 (71%), Gaps = 11/547 (2%)
 Frame = -2

Query: 1950 MSIDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYN 1771
            MS DL LK +CSGCGS  +LYGS CKH+TLCL CGKTMAEN+GKCY+CG T+TRLIREYN
Sbjct: 1    MSYDLMLKTACSGCGSQSELYGSTCKHMTLCLQCGKTMAENKGKCYECGTTVTRLIREYN 60

Query: 1770 VRASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLL 1591
            VRAS +SDKNYFIGRFVTGLPNF  K++ ENKWSL+K+G+QGRQLTDA REK KNKPW+L
Sbjct: 61   VRASLASDKNYFIGRFVTGLPNF--KKNVENKWSLRKDGIQGRQLTDAQREKLKNKPWVL 118

Query: 1590 EDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1411
            EDETGQFQ+QG LEG+QSATYYLL+LQ KEF AIPAGSW+NFNKVAQYKQLTLEEAEEKM
Sbjct: 119  EDETGQFQFQGHLEGSQSATYYLLVLQNKEFFAIPAGSWFNFNKVAQYKQLTLEEAEEKM 178

Query: 1410 KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKES-GAVGRKGSKKTAGDEEEANASDK 1234
            KNRRKTADGYQRWMMK ANNGPAAFGEV+KFDDKES G  G +G KK++ D++E N SD+
Sbjct: 179  KNRRKTADGYQRWMMKTANNGPAAFGEVDKFDDKESGGGGGGRGRKKSSADDDEGNVSDR 238

Query: 1233 GXXXXXXXEARKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAV 1054
            G        ARK+RLGLNK+                         DWEHEEIFTDDDEAV
Sbjct: 239  GEEDEDAEAARKSRLGLNKKDLDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDEAV 298

Query: 1053 GNDPAEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXGRAAGLNXXXXXX 874
            GNDP EREDLAPE+PAPPEIKQ                         G+A GLN      
Sbjct: 299  GNDPEEREDLAPEMPAPPEIKQ-DDDEENEEEEGGLSKSGKELKKLLGKANGLNDSDTED 357

Query: 873  XXXXXXXXXEIGLSPVLAPKQKEAPKEEPVDNSPSKPASTGAARGTPPTSKSAKGKRKTN 694
                     ++ L+PV A KQK+A KEEPV+ +P KP  +G+ARGTP ++K +KGKRK N
Sbjct: 358  EDDSEDMDEDMNLTPVAASKQKDATKEEPVEMTPPKPVPSGSARGTPTSTKPSKGKRKLN 417

Query: 693  GDD-KPSNGAPLKKVKTENDAKSA--KDETXXXXXXXXXXXXXXXXXXKTGSVSSS---- 535
             DD K S+GA  KKVKTEN+ KS+  ++ T                    GS  SS    
Sbjct: 418  DDDGKKSSGAAQKKVKTENETKSSVKEERTAPVSKSSASKAVKTEANSSVGSSLSSTASN 477

Query: 534  --GPVTEDEIRAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQKTNG-PN 364
              GPVTEDEIRAVLL+K  VTTQDLV++FKSRLK+KEDK+AFA ILR+ISKIQK  G  N
Sbjct: 478  ATGPVTEDEIRAVLLEKKQVTTQDLVSRFKSRLKTKEDKNAFADILRKISKIQKNAGSQN 537

Query: 363  YVVLREK 343
            +VVLREK
Sbjct: 538  FVVLREK 544


>ref|XP_014506009.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Vigna radiata var. radiata]
          Length = 538

 Score =  631 bits (1628), Expect = e-178
 Identities = 333/539 (61%), Positives = 383/539 (71%), Gaps = 3/539 (0%)
 Frame = -2

Query: 1950 MSIDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYN 1771
            MSIDL LKP+C GCGS+ DLYGSNCKH+TLCL+CGK MAEN+ KC+DCGA +TRLIREY+
Sbjct: 1    MSIDLLLKPTCGGCGSTTDLYGSNCKHMTLCLTCGKNMAENKAKCFDCGAIVTRLIREYS 60

Query: 1770 VRASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLL 1591
            VRA+S SDK+YFIGRFV+GLP+FSKK+SAENKWSLQKEGLQ RQ+TDALREKYKNKPWLL
Sbjct: 61   VRATSGSDKHYFIGRFVSGLPDFSKKKSAENKWSLQKEGLQSRQVTDALREKYKNKPWLL 120

Query: 1590 EDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1411
            EDETGQ Q+QG LEGAQSATYYLLM++ KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQFQGHLEGAQSATYYLLMMERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1410 KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKESGAVGRKGSKKTAGDEEEANASDKG 1231
            KNR+KTADGY RW+MKAA +G AAFG   + DDKES   G   S+K   +++E + SDKG
Sbjct: 181  KNRKKTADGYDRWIMKAA-SGAAAFGGRGRSDDKESIVGGGGKSRKKTDEDDEGHVSDKG 239

Query: 1230 XXXXXXXEARKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVG 1051
                    AR++RLGLNK+                         DWEHEEIFTDDDEAVG
Sbjct: 240  EEDEDEEVARRSRLGLNKKGGDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVG 299

Query: 1050 NDPAEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXGRAAGLNXXXXXXX 871
            NDPAEREDLAPEVPAPPEIKQ                          R +GLN       
Sbjct: 300  NDPAEREDLAPEVPAPPEIKQDDEDEDEENEEGGGLSKSGKELKKLLRTSGLNESDAEDD 359

Query: 870  XXXXXXXXEIGLSPVLAPKQKEAPKEEPVDNSPSKPASTGAARGTPPTSKSAKGKRKTNG 691
                    E G+ PV+A KQK+APKEEP DNSPSKP  TG A+GT  TSK +KGKRK N 
Sbjct: 360  DYDDDVDDETGVPPVIASKQKDAPKEEPTDNSPSKPVVTGTAQGTLSTSKPSKGKRKFNE 419

Query: 690  DDKPSNGAPLKKVKTENDAKS-AKDETXXXXXXXXXXXXXXXXXXKTGSVS--SSGPVTE 520
            + K + GAP KKVK EN+ KS  KDE                     G  S   SGPV+E
Sbjct: 420  ETKATTGAPPKKVKIENEPKSIVKDENGSASKNNTPAKGVPPAPSSKGGSSPIPSGPVSE 479

Query: 519  DEIRAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQKTNGPNYVVLREK 343
            +EIRAVL+QKTP+TTQDLVAKF++RL+  EDK AFA IL+RISKIQKTN  +YV+LR++
Sbjct: 480  EEIRAVLMQKTPLTTQDLVAKFRARLRCPEDKKAFADILKRISKIQKTNTSSYVILRDR 538


>ref|XP_003594206.1| transcription initiation factor IIF subunit alpha [Medicago
            truncatula] gi|87241158|gb|ABD33016.1| Transcription
            Factor IIF, Rap30/Rap74, interaction [Medicago
            truncatula] gi|355483254|gb|AES64457.1| transcription
            initiation factor IIF subunit alpha [Medicago truncatula]
          Length = 536

 Score =  627 bits (1617), Expect = e-176
 Identities = 339/539 (62%), Positives = 382/539 (70%), Gaps = 5/539 (0%)
 Frame = -2

Query: 1944 IDLQLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENQGKCYDCGATITRLIREYNVR 1765
            +DLQLK SCSGCG +  LYGSNCKHLT+C  CGKTMAEN+ KC  CGA +TRLIREYNVR
Sbjct: 1    MDLQLKSSCSGCGETTGLYGSNCKHLTICAPCGKTMAENRSKCSTCGALLTRLIREYNVR 60

Query: 1764 ASSSSDKNYFIGRFVTGLPNFSKKQSAENKWSLQKEGLQGRQLTDALREKYKNKPWLLED 1585
            ASS++DKNYFIGRF+TGLP+FSKK+SAENKWSLQK+GL+GRQ+TDA REKYKN+PWLLED
Sbjct: 61   ASSANDKNYFIGRFMTGLPDFSKKKSAENKWSLQKDGLKGRQVTDATREKYKNRPWLLED 120

Query: 1584 ETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKN 1405
            ETGQ Q+QG LEG+QSATYYLLM + KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKN
Sbjct: 121  ETGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKN 180

Query: 1404 RRKTADGYQRWMMKAANNGPAAFGEVEKFDDKESGAVGRKGSKKTAGDEEEANASDKGXX 1225
            R+KTADGYQRWMMKAANNGPAAFGE  K DDKES A G +G KKT  DE+E  +SDKG  
Sbjct: 181  RKKTADGYQRWMMKAANNGPAAFGEHGKLDDKESNAGGGRGRKKTGDDEDEGPSSDKGEE 240

Query: 1224 XXXXXEARKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGND 1045
                   RK R    K +                        DWEHEEIFTDDDEAVGND
Sbjct: 241  DEDEEVDRKKRPN-KKNTFDDDEEGPRGGDHDEDDYDVEKGDDWEHEEIFTDDDEAVGND 299

Query: 1044 PAEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXG---RAAGLNXXXXXX 874
            P EREDLAPEVPAPPEIKQ                             R  GL+      
Sbjct: 300  PEEREDLAPEVPAPPEIKQDDEEEEEDEDNEEGGGLSKSGKELKKLLGRTGGLSESDDDD 359

Query: 873  XXXXXXXXXEIGLSPVLAPKQKEAPKEEPVDNSPSKPASTGAARGTPPTSKSAKGKRKTN 694
                     E G+  V A KQKE PKEEPVDNSPSKP +TG ARGTP TSKS+K KRK N
Sbjct: 360  DDDDDDIDDEDGVPAVTATKQKE-PKEEPVDNSPSKPTATGPARGTP-TSKSSKAKRKAN 417

Query: 693  GDDKPSNGAPLKKVKTENDAKS-AKDETXXXXXXXXXXXXXXXXXXKTGSVSS-SGPVTE 520
             + KPS   P KKVKTEN+ KS AKD                     +GS ++ SGPVTE
Sbjct: 418  EEAKPSISVPPKKVKTENEPKSSAKDVNGSSSKSNAPPRGTPPPSSNSGSSNAASGPVTE 477

Query: 519  DEIRAVLLQKTPVTTQDLVAKFKSRLKSKEDKDAFAAILRRISKIQKTNGPNYVVLREK 343
            +EI+AVLLQ+TP+TTQ+LVAKF++RL+ KEDK+AFA IL+RISKIQKTNG +YV+LREK
Sbjct: 478  EEIKAVLLQRTPLTTQELVAKFRARLRCKEDKEAFANILKRISKIQKTNGSSYVILREK 536


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