BLASTX nr result

ID: Cornus23_contig00004467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00004467
         (606 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010257122.1| PREDICTED: putative methionyl-tRNA formyltra...    57   6e-06
ref|XP_010257062.1| PREDICTED: methionyl-tRNA formyltransferase,...    57   6e-06
ref|XP_010316071.1| PREDICTED: methionyl-tRNA formyltransferase,...    57   8e-06
ref|XP_006357790.1| PREDICTED: methionyl-tRNA formyltransferase,...    57   8e-06
ref|XP_010316070.1| PREDICTED: methionyl-tRNA formyltransferase,...    57   8e-06

>ref|XP_010257122.1| PREDICTED: putative methionyl-tRNA formyltransferase isoform X2
           [Nelumbo nucifera]
          Length = 346

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 32/62 (51%), Positives = 38/62 (61%)
 Frame = -3

Query: 352 LDLSSSPSLHIFRSQNMLSRSLILFTS*PSGRDRGRKVMTFPVPEHALDKVFPADLIFTP 173
           LD SSSP          + +   + T  PSGRDRGRKVM  PV + ALD+ FP+DLIFTP
Sbjct: 48  LDASSSPG--------SMFQVAAVVTQPPSGRDRGRKVMPSPVAQRALDRGFPSDLIFTP 99

Query: 172 NR 167
            R
Sbjct: 100 ER 101


>ref|XP_010257062.1| PREDICTED: methionyl-tRNA formyltransferase, mitochondrial isoform
           X1 [Nelumbo nucifera]
          Length = 359

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 32/62 (51%), Positives = 38/62 (61%)
 Frame = -3

Query: 352 LDLSSSPSLHIFRSQNMLSRSLILFTS*PSGRDRGRKVMTFPVPEHALDKVFPADLIFTP 173
           LD SSSP          + +   + T  PSGRDRGRKVM  PV + ALD+ FP+DLIFTP
Sbjct: 48  LDASSSPG--------SMFQVAAVVTQPPSGRDRGRKVMPSPVAQRALDRGFPSDLIFTP 99

Query: 172 NR 167
            R
Sbjct: 100 ER 101


>ref|XP_010316071.1| PREDICTED: methionyl-tRNA formyltransferase, mitochondrial isoform
           X2 [Solanum lycopersicum]
          Length = 292

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -3

Query: 283 LFTS*PSGRDRGRKVMTFPVPEHALDKVFPADLIFTP 173
           + T  PSGRDRGRKVM  PV +HALD+ FP+DLIFTP
Sbjct: 64  IVTQPPSGRDRGRKVMPSPVAQHALDRGFPSDLIFTP 100


>ref|XP_006357790.1| PREDICTED: methionyl-tRNA formyltransferase, mitochondrial-like
           isoform X1 [Solanum tuberosum]
           gi|565382949|ref|XP_006357791.1| PREDICTED:
           methionyl-tRNA formyltransferase, mitochondrial-like
           isoform X2 [Solanum tuberosum]
          Length = 360

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -3

Query: 283 LFTS*PSGRDRGRKVMTFPVPEHALDKVFPADLIFTP 173
           + T  PSGRDRGRKVM  PV +HALD+ FP+DLIFTP
Sbjct: 64  IVTQPPSGRDRGRKVMPSPVAQHALDRGFPSDLIFTP 100


>ref|XP_010316070.1| PREDICTED: methionyl-tRNA formyltransferase, mitochondrial isoform
           X1 [Solanum lycopersicum]
          Length = 360

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -3

Query: 283 LFTS*PSGRDRGRKVMTFPVPEHALDKVFPADLIFTP 173
           + T  PSGRDRGRKVM  PV +HALD+ FP+DLIFTP
Sbjct: 64  IVTQPPSGRDRGRKVMPSPVAQHALDRGFPSDLIFTP 100


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