BLASTX nr result
ID: Cornus23_contig00003897
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00003897
(301 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009338632.1| PREDICTED: pentatricopeptide repeat-containi... 82 2e-13
ref|XP_008371361.1| PREDICTED: pentatricopeptide repeat-containi... 81 3e-13
ref|XP_008383746.1| PREDICTED: pentatricopeptide repeat-containi... 81 4e-13
ref|XP_008225086.1| PREDICTED: pentatricopeptide repeat-containi... 80 8e-13
ref|XP_007212982.1| hypothetical protein PRUPE_ppa022486mg [Prun... 80 8e-13
emb|CBI33242.3| unnamed protein product [Vitis vinifera] 71 4e-10
ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containi... 71 4e-10
emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera] 71 4e-10
ref|XP_010108203.1| hypothetical protein L484_014529 [Morus nota... 70 5e-10
ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containi... 70 8e-10
gb|KOM53788.1| hypothetical protein LR48_Vigan09g244700 [Vigna a... 69 1e-09
gb|KOM53787.1| hypothetical protein LR48_Vigan09g244600 [Vigna a... 69 1e-09
gb|KOM32218.1| hypothetical protein LR48_Vigan01g177400 [Vigna a... 69 1e-09
ref|XP_004485772.1| PREDICTED: pentatricopeptide repeat-containi... 69 1e-09
ref|XP_002519054.1| pentatricopeptide repeat-containing protein,... 69 2e-09
ref|XP_007148172.1| hypothetical protein PHAVU_006G186200g [Phas... 69 2e-09
ref|XP_004233831.1| PREDICTED: pentatricopeptide repeat-containi... 69 2e-09
ref|XP_014517759.1| PREDICTED: pentatricopeptide repeat-containi... 68 3e-09
ref|XP_013717133.1| PREDICTED: pentatricopeptide repeat-containi... 67 4e-09
ref|XP_012091593.1| PREDICTED: pentatricopeptide repeat-containi... 67 4e-09
>ref|XP_009338632.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Pyrus x bretschneideri]
Length = 495
Score = 81.6 bits (200), Expect = 2e-13
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = +1
Query: 133 QTLIRNPFWNWSYCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAEL 300
+TLIRN + SY T+R KK TLY+KISPLGNPSL+VVPELDDW+ GNKVR AEL
Sbjct: 8 RTLIRNAMASRSYYTSRTKKPTLYNKISPLGNPSLNVVPELDDWVYNGNKVRIAEL 63
>ref|XP_008371361.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Malus domestica]
Length = 495
Score = 81.3 bits (199), Expect = 3e-13
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = +1
Query: 133 QTLIRNPFWNWSYCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAEL 300
+TLIRN + SY T+R KK TLY+KISPLGNPSL+VVPELDDW+ GNKVR AEL
Sbjct: 8 RTLIRNAMASRSYYTSRTKKPTLYNKISPLGNPSLNVVPELDDWVYNGNKVRVAEL 63
>ref|XP_008383746.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial isoform X1 [Malus domestica]
Length = 500
Score = 80.9 bits (198), Expect = 4e-13
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = +1
Query: 133 QTLIRNPFWNWSYCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAEL 300
+TLIRN + SY T+R KK TLY+KISPLGNPSL+VVPELDDW+ GNKVR AEL
Sbjct: 8 KTLIRNAIASRSYYTSRTKKPTLYNKISPLGNPSLNVVPELDDWVFNGNKVRVAEL 63
>ref|XP_008225086.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Prunus mume]
Length = 493
Score = 79.7 bits (195), Expect = 8e-13
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = +1
Query: 133 QTLIRNPFWNWSYCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAEL 300
+TLIR+ + SY T+R KK TLY+KISPLGNPSL+VVPELDDW+ KG+KVR AEL
Sbjct: 8 KTLIRSAMTSRSYYTSRTKKPTLYTKISPLGNPSLNVVPELDDWVYKGHKVRVAEL 63
>ref|XP_007212982.1| hypothetical protein PRUPE_ppa022486mg [Prunus persica]
gi|462408847|gb|EMJ14181.1| hypothetical protein
PRUPE_ppa022486mg [Prunus persica]
Length = 493
Score = 79.7 bits (195), Expect = 8e-13
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = +1
Query: 133 QTLIRNPFWNWSYCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAEL 300
+TLIR+ + SY T+R KK TLY+KISPLGNPSL+VVPELDDW+ KG+KVR AEL
Sbjct: 8 KTLIRSAMTSRSYYTSRTKKPTLYTKISPLGNPSLNVVPELDDWVYKGHKVRVAEL 63
>emb|CBI33242.3| unnamed protein product [Vitis vinifera]
Length = 335
Score = 70.9 bits (172), Expect = 4e-10
Identities = 35/57 (61%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Frame = +1
Query: 133 QTLIR-NPFWNWSYCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAEL 300
Q+LIR NP N +Y T+R K++LY+KISPLG+P+ SVVPELD+W++ GNKV AEL
Sbjct: 18 QSLIRKNPISNRTYYTSRYGKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAEL 74
>ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Vitis vinifera]
Length = 506
Score = 70.9 bits (172), Expect = 4e-10
Identities = 35/57 (61%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Frame = +1
Query: 133 QTLIR-NPFWNWSYCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAEL 300
Q+LIR NP N +Y T+R K++LY+KISPLG+P+ SVVPELD+W++ GNKV AEL
Sbjct: 18 QSLIRKNPISNRTYYTSRYGKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAEL 74
>emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
Length = 506
Score = 70.9 bits (172), Expect = 4e-10
Identities = 35/57 (61%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Frame = +1
Query: 133 QTLIR-NPFWNWSYCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAEL 300
Q+LIR NP N +Y T+R K++LY+KISPLG+P+ SVVPELD+W++ GNKV AEL
Sbjct: 18 QSLIRKNPISNRTYYTSRYGKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAEL 74
>ref|XP_010108203.1| hypothetical protein L484_014529 [Morus notabilis]
gi|587931029|gb|EXC18128.1| hypothetical protein
L484_014529 [Morus notabilis]
Length = 494
Score = 70.5 bits (171), Expect = 5e-10
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +1
Query: 133 QTLIRNPFWNWSYCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAEL 300
Q LIRN + SY T+ K TLY KISPLG+P SV PELDDW++KG KVR AEL
Sbjct: 8 QVLIRNASSSRSYYTSTANKATLYYKISPLGDPGRSVAPELDDWVQKGKKVRVAEL 63
>ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
gi|947061597|gb|KRH10858.1| hypothetical protein
GLYMA_15G073300 [Glycine max]
Length = 486
Score = 69.7 bits (169), Expect = 8e-10
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +1
Query: 166 SYCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAEL 300
SY T+R KK +LYSKISPLGNP+ SVVP LDDW+ KGNK+R AEL
Sbjct: 12 SYYTSRSKKPSLYSKISPLGNPNTSVVPVLDDWVFKGNKLRVAEL 56
>gb|KOM53788.1| hypothetical protein LR48_Vigan09g244700 [Vigna angularis]
Length = 459
Score = 68.9 bits (167), Expect = 1e-09
Identities = 33/45 (73%), Positives = 37/45 (82%)
Frame = +1
Query: 166 SYCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAEL 300
SY T+R K +LYSKISPLGNP+ SVVP LDDW+ KGNKVR AEL
Sbjct: 12 SYYTSRTNKPSLYSKISPLGNPNTSVVPVLDDWVYKGNKVRVAEL 56
>gb|KOM53787.1| hypothetical protein LR48_Vigan09g244600 [Vigna angularis]
Length = 378
Score = 68.9 bits (167), Expect = 1e-09
Identities = 33/45 (73%), Positives = 37/45 (82%)
Frame = +1
Query: 166 SYCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAEL 300
SY T+R K +LYSKISPLGNP+ SVVP LDDW+ KGNKVR AEL
Sbjct: 12 SYYTSRTNKPSLYSKISPLGNPNTSVVPVLDDWVYKGNKVRVAEL 56
>gb|KOM32218.1| hypothetical protein LR48_Vigan01g177400 [Vigna angularis]
Length = 454
Score = 68.9 bits (167), Expect = 1e-09
Identities = 33/45 (73%), Positives = 37/45 (82%)
Frame = +1
Query: 166 SYCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAEL 300
SY T+R K +LYSKISPLGNP+ SVVP LDDW+ KGNKVR AEL
Sbjct: 7 SYYTSRTNKPSLYSKISPLGNPNTSVVPVLDDWVYKGNKVRVAEL 51
>ref|XP_004485772.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Cicer arietinum]
Length = 492
Score = 68.9 bits (167), Expect = 1e-09
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = +1
Query: 160 NWSYCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAEL 300
N SY T+R KK +LYSKISPLGNP+ ++VPELDDW+ KGNKV EL
Sbjct: 17 NRSYYTSRTKKPSLYSKISPLGNPTTNIVPELDDWIYKGNKVCVGEL 63
>ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541717|gb|EEF43265.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 485
Score = 68.6 bits (166), Expect = 2e-09
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = +1
Query: 169 YCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAEL 300
Y NR KKVTLYSKISPLG+P+ S+VPELD+W++ GNKVR EL
Sbjct: 6 YYANRTKKVTLYSKISPLGDPNTSLVPELDNWVQDGNKVRVGEL 49
>ref|XP_007148172.1| hypothetical protein PHAVU_006G186200g [Phaseolus vulgaris]
gi|561021395|gb|ESW20166.1| hypothetical protein
PHAVU_006G186200g [Phaseolus vulgaris]
Length = 486
Score = 68.6 bits (166), Expect = 2e-09
Identities = 33/45 (73%), Positives = 36/45 (80%)
Frame = +1
Query: 166 SYCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAEL 300
SY T+R K LYSKISPLGNP+ SVVP LDDW+ KGNKVR AEL
Sbjct: 12 SYYTSRTNKPNLYSKISPLGNPNTSVVPVLDDWVYKGNKVRVAEL 56
>ref|XP_004233831.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Solanum lycopersicum]
Length = 491
Score = 68.6 bits (166), Expect = 2e-09
Identities = 37/61 (60%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Frame = +1
Query: 124 RLIQTL--IRNPFWNWSYCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAE 297
R+IQ L I N F Y +++ KKV+LYSKISPLGNPS SV ELD+W+ KGNK+RFAE
Sbjct: 6 RIIQALTGITNRF----YHSDKPKKVSLYSKISPLGNPSCSVTNELDEWVCKGNKIRFAE 61
Query: 298 L 300
+
Sbjct: 62 I 62
>ref|XP_014517759.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Vigna radiata var. radiata]
Length = 486
Score = 67.8 bits (164), Expect = 3e-09
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = +1
Query: 166 SYCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAEL 300
SY T+R K +LY+KISPLGNP+ SVVP LDDW+ KGNKVR AEL
Sbjct: 12 SYYTSRTNKPSLYTKISPLGNPNTSVVPVLDDWVYKGNKVRVAEL 56
>ref|XP_013717133.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Brassica napus]
Length = 488
Score = 67.4 bits (163), Expect = 4e-09
Identities = 33/58 (56%), Positives = 40/58 (68%)
Frame = +1
Query: 127 LIQTLIRNPFWNWSYCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAEL 300
+++ + N F + Y TNR KK TLYSKISPLGNP SV PEL +W+ GNKV AEL
Sbjct: 3 ILRRIPANLFTSRYYYTNRVKKTTLYSKISPLGNPKSSVYPELQNWVHSGNKVSVAEL 60
>ref|XP_012091593.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial isoform X1 [Jatropha curcas]
Length = 495
Score = 67.4 bits (163), Expect = 4e-09
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Frame = +1
Query: 127 LIQTLIRNP--FWNWSYCTNRQKKVTLYSKISPLGNPSLSVVPELDDWLEKGNKVRFAEL 300
L TLI+N + Y TNR KKVTLYSK+SPLG+PS +VP LD+W++ GNKVR EL
Sbjct: 6 LSNTLIQNQNSLISRFYYTNRTKKVTLYSKLSPLGDPSTGLVPVLDNWVQNGNKVRVGEL 65