BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00003854
         (2315 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343037.1| PREDICTED: RNA polymerase II-associated fact...   662   0.0  
emb|CDO97975.1| unnamed protein product [Coffea canephora]            660   0.0  
ref|XP_009786773.1| PREDICTED: RNA polymerase II-associated fact...   652   0.0  
ref|XP_009608739.1| PREDICTED: RNA polymerase II-associated fact...   652   0.0  
ref|XP_002278075.3| PREDICTED: RNA polymerase II-associated fact...   649   0.0  
ref|XP_004235642.1| PREDICTED: RNA polymerase II-associated fact...   646   0.0  
ref|XP_007217663.1| hypothetical protein PRUPE_ppa002145mg [Prun...   637   e-179
ref|XP_010256861.1| PREDICTED: RNA polymerase II-associated fact...   635   e-179
ref|XP_008222683.1| PREDICTED: RNA polymerase II-associated fact...   633   e-178
ref|XP_009353546.1| PREDICTED: RNA polymerase II-associated fact...   632   e-178
ref|XP_010098144.1| hypothetical protein L484_026278 [Morus nota...   630   e-177
ref|XP_008367453.1| PREDICTED: RNA polymerase II-associated fact...   629   e-177
ref|XP_008348493.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   629   e-177
ref|XP_009342534.1| PREDICTED: RNA polymerase II-associated fact...   626   e-176
ref|XP_006465692.1| PREDICTED: RNA polymerase II-associated fact...   622   e-175
ref|XP_006426877.1| hypothetical protein CICLE_v10025066mg [Citr...   619   e-174
ref|XP_008228451.1| PREDICTED: bromodomain-containing protein 4 ...   618   e-174
ref|XP_006465693.1| PREDICTED: RNA polymerase II-associated fact...   614   e-172
gb|KDO51788.1| hypothetical protein CISIN_1g005794mg [Citrus sin...   611   e-172
ref|XP_006426878.1| hypothetical protein CICLE_v10025066mg [Citr...   609   e-171

>ref|XP_006343037.1| PREDICTED: RNA polymerase II-associated factor 1 homolog [Solanum
            tuberosum]
          Length = 700

 Score =  662 bits (1707), Expect = 0.0
 Identities = 358/594 (60%), Positives = 406/594 (68%), Gaps = 3/594 (0%)
 Frame = -1

Query: 1901 PALAPMYYPSSQYSQFNHQQLQPLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPT 1722
            P  APMYYPSSQYSQ++  Q QPLE                                   
Sbjct: 110  PPPAPMYYPSSQYSQYS--QNQPLEPPPPPPPPSSPPSSAIPPPPPPSQPPSPPPPPSSV 167

Query: 1721 ISLSK--ESRPDGEKGASKEVMGSQLRELGHSNQGAXXXXXXXXXXXXXXXXSNGHLXXX 1548
             S  +  ESRP  EK        S  RE GH N  A                SN      
Sbjct: 168  PSQDQRNESRPSAEKRRE-----SGWRESGHGNHTARSKQPGHSVPPMPVKKSNAPSGRV 222

Query: 1547 XXXXXXXXXXXXXXETQKHEEKHRLHLKQSQNTVLRKTQMLSSGMRGHGSISGSRMAERI 1368
                          E Q+HEEK+R HLK+SQN VL+KTQML+SG +GHGSIS S MA+R 
Sbjct: 223  ETEEERRLRKKREIEKQRHEEKNRQHLKESQNKVLQKTQMLTSGTKGHGSISASHMADRR 282

Query: 1367 NTPLLSGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLLSLRRDKDRFTEYAITSLEKL 1188
              PLLSGER ENRLKKPTTFLCKLKFRNELPDP+AQPKLL+LRRD DRFT+Y+ITSLEK+
Sbjct: 283  TAPLLSGERTENRLKKPTTFLCKLKFRNELPDPTAQPKLLTLRRDPDRFTKYSITSLEKM 342

Query: 1187 HKPQLYVETDLGIPLDLLDLSVYNRXXXXXXXXXXXXXXXXXXXXPVTPIKKTGIKRKER 1008
            HKPQLYVE DLGIPLDLLDLSVYN                     P+TPIKK GIK+KER
Sbjct: 343  HKPQLYVEPDLGIPLDLLDLSVYNPPKGVKIPLAPEDEELLRDDNPITPIKKDGIKKKER 402

Query: 1007 PTDHGVSWLVRTQYISPLSMEAAKQSLTEKQAKELRETRGC-SILENFNNRESKIQEIEA 831
            PTD GVSWLV+TQYISPLS E+AKQSLTEKQAKELRET+G  +ILEN N R+ +IQEIEA
Sbjct: 403  PTDKGVSWLVKTQYISPLSTESAKQSLTEKQAKELRETKGGRNILENLNKRDRQIQEIEA 462

Query: 830  SFEACKSRPVHATNNKLQPVEILPLLPDFDRYNDQFVIATFDSAPTADSETYNKLDKSVR 651
            SFEACKSRP+HATN +LQPV++ PL PDFDRY D FV+A +DSAPTADSETYNKLDK+VR
Sbjct: 463  SFEACKSRPIHATNRRLQPVKVQPLYPDFDRYKDPFVLANYDSAPTADSETYNKLDKTVR 522

Query: 650  DAYESQAIMKSFVATGSDSANPEKFLAYMTPSPDELPKDMYDESEDISFSWVREYHWDVR 471
            DA ESQA+MKSFVAT SD+  P+KFLAYM P+P+EL KDMYDE+EDIS+SWVREYHWDVR
Sbjct: 523  DACESQAVMKSFVATSSDADKPDKFLAYMVPAPNELSKDMYDENEDISYSWVREYHWDVR 582

Query: 470  GDDADDPTTYLVSFNESEACYVPLPMKLILRKKRAREGKSNEEVEHFPAPSSVTVRRRST 291
            GDDADDP TY+V+F E+EA Y+PLP KL+LRKKRAREGKSNEEVEHFP PS VTVR+R T
Sbjct: 583  GDDADDPNTYVVAFGETEARYMPLPTKLVLRKKRAREGKSNEEVEHFPVPSRVTVRKRPT 642

Query: 290  VAAIQLKESGNYSDLRDNLLNSKXXXXXXXXXXXXRQQKVAQDQEMDQSSGAEY 129
             AAI+LKE G Y+      ++S              Q     D + DQSSG EY
Sbjct: 643  AAAIELKEEGGYTTALKGNVSSSKRSRISHEDDVGEQHNNMHDDDQDQSSGGEY 696


>emb|CDO97975.1| unnamed protein product [Coffea canephora]
          Length = 706

 Score =  660 bits (1703), Expect = 0.0
 Identities = 355/589 (60%), Positives = 414/589 (70%), Gaps = 1/589 (0%)
 Frame = -1

Query: 1892 APMYYPSSQYSQFN-HQQLQPLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTIS 1716
            AP YYPS QYSQ++ HQ LQPL+                                     
Sbjct: 123  APGYYPSGQYSQYSQHQPLQPLQPPPPPPPPSSPPPNSVAPPPPPPPLSPPPLPSSLPPG 182

Query: 1715 LSKESRPDGEKGASKEVMGSQLRELGHSNQGAXXXXXXXXXXXXXXXXSNGHLXXXXXXX 1536
             SKE+R   E+  S+E   S  R+LG++ Q                   +G         
Sbjct: 183  QSKENRNAEERRPSREGRDSGWRDLGNAKQ------QKVPVPQVPARKPSGPPGRVETEE 236

Query: 1535 XXXXXXXXXXETQKHEEKHRLHLKQSQNTVLRKTQMLSSGMRGHGSISGSRMAERINTPL 1356
                      E Q+ EEKHR H+K+SQ+ VL+KTQM+SSG + HGSI+GS + +R   PL
Sbjct: 237  ERRLRKKREYEKQRQEEKHRQHIKESQSRVLQKTQMISSGTKAHGSITGSHIGDRRTAPL 296

Query: 1355 LSGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLLSLRRDKDRFTEYAITSLEKLHKPQ 1176
            LSGERIENRLKKPTTFLCKLKFRNELPD +AQPKL SLRRDKDRFT+YAITSLEK+HKP+
Sbjct: 297  LSGERIENRLKKPTTFLCKLKFRNELPDQTAQPKLTSLRRDKDRFTKYAITSLEKMHKPE 356

Query: 1175 LYVETDLGIPLDLLDLSVYNRXXXXXXXXXXXXXXXXXXXXPVTPIKKTGIKRKERPTDH 996
            LYVE DLGIPLDLLDLSVYN                     PVTPIKK GIKRKERPTD 
Sbjct: 357  LYVEPDLGIPLDLLDLSVYNPPKGRSLQLDPEDEELLRDDDPVTPIKKDGIKRKERPTDQ 416

Query: 995  GVSWLVRTQYISPLSMEAAKQSLTEKQAKELRETRGCSILENFNNRESKIQEIEASFEAC 816
            GVSWLV+TQYISPLSME++KQSLTEKQAKELRE R  ++LEN N+RE +IQEI+ASFEAC
Sbjct: 417  GVSWLVKTQYISPLSMESSKQSLTEKQAKELREGR--NLLENLNSRERQIQEIQASFEAC 474

Query: 815  KSRPVHATNNKLQPVEILPLLPDFDRYNDQFVIATFDSAPTADSETYNKLDKSVRDAYES 636
            K+RP+HATN++LQ V+ILPL PDFDRY+DQFV+A FDSAPTADSE Y+KLDK +RD++ES
Sbjct: 475  KARPIHATNSRLQAVDILPLFPDFDRYDDQFVVANFDSAPTADSEIYSKLDKCIRDSHES 534

Query: 635  QAIMKSFVATGSDSANPEKFLAYMTPSPDELPKDMYDESEDISFSWVREYHWDVRGDDAD 456
            QAIMKSFVAT SD A P+KFLAYM PSP+EL KD+YDESED+S+SW+REYHWDVRGDDAD
Sbjct: 535  QAIMKSFVATSSDMAKPDKFLAYMVPSPNELSKDIYDESEDVSYSWIREYHWDVRGDDAD 594

Query: 455  DPTTYLVSFNESEACYVPLPMKLILRKKRAREGKSNEEVEHFPAPSSVTVRRRSTVAAIQ 276
            DP TYLV+F ES+A Y+PLP KLILRKKRAREGKS+EEVEHFP PS +TVR+RSTVAAI+
Sbjct: 595  DPATYLVTFGESQAHYMPLPTKLILRKKRAREGKSSEEVEHFPVPSRLTVRKRSTVAAIE 654

Query: 275  LKESGNYSDLRDNLLNSKXXXXXXXXXXXXRQQKVAQDQEMDQSSGAEY 129
            LKE G YS  + +  NSK             Q+ V  D E DQSSG EY
Sbjct: 655  LKEVGGYSASKGSGFNSKRARLDMEDGLGQSQKSV-DDMEPDQSSGGEY 702


>ref|XP_009786773.1| PREDICTED: RNA polymerase II-associated factor 1 homolog [Nicotiana
            sylvestris]
          Length = 656

 Score =  652 bits (1681), Expect = 0.0
 Identities = 330/459 (71%), Positives = 371/459 (80%), Gaps = 2/459 (0%)
 Frame = -1

Query: 1499 QKHEEKHRLH-LKQSQNTVLRKTQMLSSGMRGHGSISGSRMAERINTPLLSGERIENRLK 1323
            Q+HEEKHR   LK+SQN VL+KTQML+SGM+GHGSIS S MA+R  TPLLS ER ENRLK
Sbjct: 194  QRHEEKHRQQQLKESQNRVLQKTQMLASGMKGHGSISASHMADRRTTPLLSSERTENRLK 253

Query: 1322 KPTTFLCKLKFRNELPDPSAQPKLLSLRRDKDRFTEYAITSLEKLHKPQLYVETDLGIPL 1143
            KPTTFLCKLKFRNELPDP AQPKLL + RDKDRFT+Y+ITSLEK+HKP+LYVE DLGIPL
Sbjct: 254  KPTTFLCKLKFRNELPDPVAQPKLLQIPRDKDRFTKYSITSLEKMHKPELYVEPDLGIPL 313

Query: 1142 DLLDLSVYNRXXXXXXXXXXXXXXXXXXXXPVTPIKKTGIKRKERPTDHGVSWLVRTQYI 963
            DLLDLSVYN                     P+TPIKK GIK+KERPTD GVSWLV+TQYI
Sbjct: 314  DLLDLSVYNPPKGERLPLAPEDEELLRDDNPITPIKKDGIKKKERPTDKGVSWLVKTQYI 373

Query: 962  SPLSMEAAKQSLTEKQAKELRETRGC-SILENFNNRESKIQEIEASFEACKSRPVHATNN 786
            SPLS E+AKQSLTEKQAKELRE RG  +ILEN NNR+ ++QEIEASFEACKSRP+HATN 
Sbjct: 374  SPLSTESAKQSLTEKQAKELRENRGGRNILENLNNRDRQLQEIEASFEACKSRPIHATNR 433

Query: 785  KLQPVEILPLLPDFDRYNDQFVIATFDSAPTADSETYNKLDKSVRDAYESQAIMKSFVAT 606
            +LQPV++ PL PDFDRY D FV+A FDSAPTADSETYNKLDK+VRDAYESQAIMKSFVAT
Sbjct: 434  RLQPVKVQPLFPDFDRYQDPFVLANFDSAPTADSETYNKLDKTVRDAYESQAIMKSFVAT 493

Query: 605  GSDSANPEKFLAYMTPSPDELPKDMYDESEDISFSWVREYHWDVRGDDADDPTTYLVSFN 426
             SD+  P+KFLAYM P+P+EL KDMYDE+EDIS+SWVREYHWDVRGDDADDPTTYLV+F 
Sbjct: 494  SSDADKPDKFLAYMVPAPNELTKDMYDENEDISYSWVREYHWDVRGDDADDPTTYLVAFG 553

Query: 425  ESEACYVPLPMKLILRKKRAREGKSNEEVEHFPAPSSVTVRRRSTVAAIQLKESGNYSDL 246
            E+EA Y+PLP KL+LRKKRAREGKSN+EVEHFP PS VTVRRR TVAAI+LKE G Y+  
Sbjct: 554  ETEAHYMPLPTKLVLRKKRAREGKSNDEVEHFPVPSRVTVRRRKTVAAIELKEEGGYTTA 613

Query: 245  RDNLLNSKXXXXXXXXXXXXRQQKVAQDQEMDQSSGAEY 129
                ++S              QQ    D + DQSSGAEY
Sbjct: 614  SKGGVSSSRRARTNDEDAVGEQQNDMHDGDQDQSSGAEY 652


>ref|XP_009608739.1| PREDICTED: RNA polymerase II-associated factor 1 homolog [Nicotiana
            tomentosiformis]
          Length = 656

 Score =  652 bits (1681), Expect = 0.0
 Identities = 330/459 (71%), Positives = 371/459 (80%), Gaps = 2/459 (0%)
 Frame = -1

Query: 1499 QKHEEKHRLH-LKQSQNTVLRKTQMLSSGMRGHGSISGSRMAERINTPLLSGERIENRLK 1323
            Q+HEEKHR   LK+SQN VL+KTQML+SGM+GHGSIS S MA+R  TPLLS ER ENRLK
Sbjct: 194  QRHEEKHRQQQLKESQNRVLQKTQMLASGMKGHGSISASHMADRRTTPLLSSERTENRLK 253

Query: 1322 KPTTFLCKLKFRNELPDPSAQPKLLSLRRDKDRFTEYAITSLEKLHKPQLYVETDLGIPL 1143
            KPTTFLCKLKFRNELPDP AQPKLL + RDKDRFT+Y+ITSLEK+HKP+LYVE DLGIPL
Sbjct: 254  KPTTFLCKLKFRNELPDPVAQPKLLQIPRDKDRFTKYSITSLEKMHKPELYVEPDLGIPL 313

Query: 1142 DLLDLSVYNRXXXXXXXXXXXXXXXXXXXXPVTPIKKTGIKRKERPTDHGVSWLVRTQYI 963
            DLLDLSVYN                     P+TPIKK GIK+KERPTD GVSWLV+TQYI
Sbjct: 314  DLLDLSVYNPPKGERIPLAPEDEELLRDDNPITPIKKDGIKKKERPTDKGVSWLVKTQYI 373

Query: 962  SPLSMEAAKQSLTEKQAKELRETRGC-SILENFNNRESKIQEIEASFEACKSRPVHATNN 786
            SPLS E+AKQSLTEKQAKELRE RG  +ILEN NNR+ ++QEIEASFEACKSRP+HATN 
Sbjct: 374  SPLSTESAKQSLTEKQAKELRENRGGRNILENLNNRDRQLQEIEASFEACKSRPIHATNR 433

Query: 785  KLQPVEILPLLPDFDRYNDQFVIATFDSAPTADSETYNKLDKSVRDAYESQAIMKSFVAT 606
            +LQPV++ PL PDFDRY D FV+A FDSAPTADSETYNKLDK+VRDAYESQAIMKSFVAT
Sbjct: 434  RLQPVKVQPLFPDFDRYQDPFVLANFDSAPTADSETYNKLDKTVRDAYESQAIMKSFVAT 493

Query: 605  GSDSANPEKFLAYMTPSPDELPKDMYDESEDISFSWVREYHWDVRGDDADDPTTYLVSFN 426
             SD+  P+KFLAYM P+P+EL KDMYDE+EDIS+SWVREYHWDVRGDDADDPTTYLV+F 
Sbjct: 494  SSDADKPDKFLAYMVPAPNELTKDMYDENEDISYSWVREYHWDVRGDDADDPTTYLVAFG 553

Query: 425  ESEACYVPLPMKLILRKKRAREGKSNEEVEHFPAPSSVTVRRRSTVAAIQLKESGNYSDL 246
            E+EA Y+PLP KL+LRKKRAREGKSN+EVEHFP PS VTVRRR TVAAI+LKE G Y+  
Sbjct: 554  ETEAHYMPLPTKLVLRKKRAREGKSNDEVEHFPVPSRVTVRRRKTVAAIELKEEGGYATA 613

Query: 245  RDNLLNSKXXXXXXXXXXXXRQQKVAQDQEMDQSSGAEY 129
                ++S              QQ    D + DQSSGAEY
Sbjct: 614  SKGGVSSSRRARTNDEDAVGEQQNDMHDGDQDQSSGAEY 652


>ref|XP_002278075.3| PREDICTED: RNA polymerase II-associated factor 1 homolog [Vitis
            vinifera]
          Length = 702

 Score =  649 bits (1674), Expect = 0.0
 Identities = 354/598 (59%), Positives = 416/598 (69%), Gaps = 7/598 (1%)
 Frame = -1

Query: 1904 EPALAPMYYPSSQYSQFNHQQLQPLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 1725
            +P   PMYYPSSQYSQF+HQ +QP                                    
Sbjct: 108  QPPQGPMYYPSSQYSQFSHQPMQPPPPPPPSSPPPSSLIPPPPPPASPPPPPSSVPPQGQ 167

Query: 1724 TISLSKESRPDG-----EKGASKEVMGSQLRELGHSNQGAXXXXXXXXXXXXXXXXSNGH 1560
                +KE  PDG     +KGA K++ G+  RE GHSNQG                 SNG 
Sbjct: 168  ----NKEPAPDGGSHGRDKGAPKDLRGAGRREPGHSNQGPSGKQQKPPVPPAPVKKSNGP 223

Query: 1559 LXXXXXXXXXXXXXXXXXETQKHEEKHRLHLKQSQNTVLRKTQMLSSGMRGHGSI-SGSR 1383
                              E Q+ EEK +  LK+SQNTVL+KTQMLSSG +GHGS+  GSR
Sbjct: 224  PGRVETEEERRLRKKREFEKQRQEEKQKHQLKESQNTVLQKTQMLSSG-KGHGSVVGGSR 282

Query: 1382 MAERINTPLLSGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLLSLRRDKDRFTEYAIT 1203
            M ER  TP LSG+RIENRL+KPTTFLCKLKFRNELPDP+AQPKL++L+ DKDRFT+Y IT
Sbjct: 283  MGERRTTPFLSGDRIENRLRKPTTFLCKLKFRNELPDPTAQPKLMALKTDKDRFTKYTIT 342

Query: 1202 SLEKLHKPQLYVETDLGIPLDLLDLSVYNRXXXXXXXXXXXXXXXXXXXXPVTPIKKTGI 1023
            SLEK+HKPQL+VE DLGIPLDLLDLSVYN                      VTP+KK GI
Sbjct: 343  SLEKMHKPQLFVEPDLGIPLDLLDLSVYN-PPSVRRPLDPEDEELLRDDESVTPVKKEGI 401

Query: 1022 KRKERPTDHGVSWLVRTQYISPLSMEAAKQSLTEKQAKELRETRGC-SILENFNNRESKI 846
            K+KERPTD GVSWLV+TQYISPLS E+ KQSLTEKQAKELRET+G  +ILENFN+RE KI
Sbjct: 402  KKKERPTDKGVSWLVKTQYISPLSTESTKQSLTEKQAKELRETKGGRNILENFNSRERKI 461

Query: 845  QEIEASFEACKSRPVHATNNKLQPVEILPLLPDFDRYNDQFVIATFDSAPTADSETYNKL 666
            Q IEA+F A K  PVH+TN  L+PVEILPLLPDF RY+D FV+A+FDSAPTADSE Y+KL
Sbjct: 462  QNIEAAFAASKITPVHSTNKSLKPVEILPLLPDFARYDDSFVVASFDSAPTADSEIYSKL 521

Query: 665  DKSVRDAYESQAIMKSFVATGSDSANPEKFLAYMTPSPDELPKDMYDESEDISFSWVREY 486
            DK+VRD++ESQAI+KS++ATGSD + PEKFLAYM PSPDEL KD+YDE+ED S+SWVREY
Sbjct: 522  DKTVRDSHESQAILKSYMATGSDPSKPEKFLAYMAPSPDELSKDIYDENEDTSYSWVREY 581

Query: 485  HWDVRGDDADDPTTYLVSFNESEACYVPLPMKLILRKKRAREGKSNEEVEHFPAPSSVTV 306
            HWDVRGDDADDPTTYLVSFN+++A Y+PLP KL+LRKKRA+EG+S++EVEHFP PS VTV
Sbjct: 582  HWDVRGDDADDPTTYLVSFNKTDARYLPLPTKLLLRKKRAKEGRSSDEVEHFPVPSKVTV 641

Query: 305  RRRSTVAAIQLKESGNYSDLRDNLLNSKXXXXXXXXXXXXRQQKVAQDQEMDQSSGAE 132
            R+R  VAAI+LK+   YS  +  + +SK            R  K  QDQ MDQSSGAE
Sbjct: 642  RQRPNVAAIELKDEEVYSSSKRGVSSSK--RGVDMEDGLGRSYKGVQDQHMDQSSGAE 697


>ref|XP_004235642.1| PREDICTED: RNA polymerase II-associated factor 1 homolog [Solanum
            lycopersicum]
          Length = 698

 Score =  646 bits (1667), Expect = 0.0
 Identities = 347/592 (58%), Positives = 405/592 (68%), Gaps = 1/592 (0%)
 Frame = -1

Query: 1901 PALAPMYYPSSQYSQFNHQQLQPLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPT 1722
            P  APMYYPSSQ SQ++  Q  PLE                                   
Sbjct: 108  PPPAPMYYPSSQDSQYS--QNHPLEPPPPPPPPSSPPTSAIPPPPPPSQPPSPPPPPS-- 163

Query: 1721 ISLSKESRPDGEKGASKEVMGSQLRELGHSNQGAXXXXXXXXXXXXXXXXSNGHLXXXXX 1542
             S+  + + +  + + ++   S  RE  H N  A                SN H      
Sbjct: 164  -SVPPQKQRNESRHSVEKRRESGWRESRHGNHTARSKQPDHSVPPLPMKKSNAHSGRVET 222

Query: 1541 XXXXXXXXXXXXETQKHEEKHRLHLKQSQNTVLRKTQMLSSGMRGHGSISGSRMAERINT 1362
                        E Q+HEEK+R HLK+SQN VL+KTQML+SG +GHGSIS S MA+R  T
Sbjct: 223  EEERRSRKKREIEKQRHEEKNRQHLKESQNKVLQKTQMLTSGTKGHGSISASHMADRRTT 282

Query: 1361 PLLSGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLLSLRRDKDRFTEYAITSLEKLHK 1182
            PLLSGER ENRLKKPTTFLCKLKFRNELPDP+AQPKLL+LRRD DRFT+Y+ITSLEK+HK
Sbjct: 283  PLLSGERTENRLKKPTTFLCKLKFRNELPDPTAQPKLLTLRRDPDRFTKYSITSLEKMHK 342

Query: 1181 PQLYVETDLGIPLDLLDLSVYNRXXXXXXXXXXXXXXXXXXXXPVTPIKKTGIKRKERPT 1002
            PQL+VE DLGIPLDLLDLSVYN                     P+TPIKK GIK+KERPT
Sbjct: 343  PQLHVEPDLGIPLDLLDLSVYNPPKGVKIPLAPEDEELLRDDNPITPIKKDGIKKKERPT 402

Query: 1001 DHGVSWLVRTQYISPLSMEAAKQSLTEKQAKELRETRGC-SILENFNNRESKIQEIEASF 825
            D GVSWLV+TQYISPLS E+AKQSLTEKQAKELRET+G  +ILEN N R+ +IQEIEASF
Sbjct: 403  DKGVSWLVKTQYISPLSTESAKQSLTEKQAKELRETKGGRNILENLNKRDRQIQEIEASF 462

Query: 824  EACKSRPVHATNNKLQPVEILPLLPDFDRYNDQFVIATFDSAPTADSETYNKLDKSVRDA 645
            EACKSRP+HA+N +LQP+++ PL PDFDRY D FV+A +DSAPTADSETY+KLDK+VRDA
Sbjct: 463  EACKSRPIHASNRRLQPIKVQPLYPDFDRYKDPFVLANYDSAPTADSETYSKLDKTVRDA 522

Query: 644  YESQAIMKSFVATGSDSANPEKFLAYMTPSPDELPKDMYDESEDISFSWVREYHWDVRGD 465
             ESQA+MKSFVAT SD+  P+KFLAYM P+P+EL KD+YDESEDIS+SWVREYHWDVRGD
Sbjct: 523  CESQAVMKSFVATSSDADKPDKFLAYMVPAPNELSKDIYDESEDISYSWVREYHWDVRGD 582

Query: 464  DADDPTTYLVSFNESEACYVPLPMKLILRKKRAREGKSNEEVEHFPAPSSVTVRRRSTVA 285
            DADDP TY+V+F E EA Y+PLP KL+LRKKRAREGKSNEEVEHFP PS VTVR+R T A
Sbjct: 583  DADDPNTYVVAFGEREARYMPLPTKLVLRKKRAREGKSNEEVEHFPVPSRVTVRKRPTAA 642

Query: 284  AIQLKESGNYSDLRDNLLNSKXXXXXXXXXXXXRQQKVAQDQEMDQSSGAEY 129
            AI+LKE G Y+      ++S              Q     D + DQSSG EY
Sbjct: 643  AIELKEEGGYTTALKGNVSSSKRSRISHEDDVGEQHNNMHDDDQDQSSGGEY 694


>ref|XP_007217663.1| hypothetical protein PRUPE_ppa002145mg [Prunus persica]
            gi|462413813|gb|EMJ18862.1| hypothetical protein
            PRUPE_ppa002145mg [Prunus persica]
          Length = 709

 Score =  637 bits (1642), Expect = e-179
 Identities = 344/592 (58%), Positives = 414/592 (69%), Gaps = 1/592 (0%)
 Frame = -1

Query: 1904 EPALAPMYYPSSQYSQFNHQQLQPLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 1725
            +P  APMYY +SQYSQ++HQ +QPL+                                  
Sbjct: 121  QPPQAPMYYQNSQYSQYSHQPIQPLQQPPPPPPPPFSPSSSVPPPPPPPGSPPPPPPQSK 180

Query: 1724 TISLSKESRPDGEKGASKEVMGSQLRELGHSNQGAXXXXXXXXXXXXXXXXSNGHLXXXX 1545
               + + S    EKGA ++V  S  RE GH N G                 +NG      
Sbjct: 181  DGGVDRGSH---EKGAPRDVSVSGRREHGHLNHGVPQKQHKPPVPSMPVKKANGPPGRVE 237

Query: 1544 XXXXXXXXXXXXXETQKHEEKHRLHLKQSQNTVLRKTQMLSSGMRGHGSISGSRMAERIN 1365
                         E Q+ EEKHR  LK SQN+VL+KTQMLSSG +GHGSI+GSRM ER  
Sbjct: 238  TEEERRLRKKREFEKQRQEEKHRQQLKDSQNSVLQKTQMLSSG-KGHGSIAGSRMGERRA 296

Query: 1364 TPLLSGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLLSLRRDKDRFTEYAITSLEKLH 1185
            TP LSGER ENRLKKPTTF+CKLKFRNELPDPSAQPKL+SL++DKD++T+Y ITSLEK +
Sbjct: 297  TPFLSGERTENRLKKPTTFVCKLKFRNELPDPSAQPKLMSLKKDKDQYTKYTITSLEKTY 356

Query: 1184 KPQLYVETDLGIPLDLLDLSVYNRXXXXXXXXXXXXXXXXXXXXPVTPIKKTGIKRKERP 1005
            KP+L+VE DLGIPLDLLDLSVYN                       TP+K  GI+RKERP
Sbjct: 357  KPKLFVEPDLGIPLDLLDLSVYN-PPSVRPPLALEDEELLRDDVAATPVKNNGIRRKERP 415

Query: 1004 TDHGVSWLVRTQYISPLSMEAAKQSLTEKQAKELRETRGC-SILENFNNRESKIQEIEAS 828
            TD GV+WLV+TQYISPLSM++A+QSLTEKQAKELRE +G  +IL+N N+RE +I++IEAS
Sbjct: 416  TDKGVAWLVKTQYISPLSMDSARQSLTEKQAKELREMKGGRNILDNLNDRERQIKDIEAS 475

Query: 827  FEACKSRPVHATNNKLQPVEILPLLPDFDRYNDQFVIATFDSAPTADSETYNKLDKSVRD 648
            FEACKSRPVHATN  L PVEILPLLPDF+RY DQFV+A FD APTADSE Y+KLD+S  D
Sbjct: 476  FEACKSRPVHATNKNLYPVEILPLLPDFERYEDQFVLAAFDGAPTADSEIYSKLDQSGHD 535

Query: 647  AYESQAIMKSFVATGSDSANPEKFLAYMTPSPDELPKDMYDESEDISFSWVREYHWDVRG 468
            AYES+AIMKS+  TG+D ANPEKFLAYM PSP+EL KD YDESED+S+SWVREYH+DVRG
Sbjct: 536  AYESRAIMKSYKVTGADPANPEKFLAYMVPSPNELSKDPYDESEDVSYSWVREYHYDVRG 595

Query: 467  DDADDPTTYLVSFNESEACYVPLPMKLILRKKRAREGKSNEEVEHFPAPSSVTVRRRSTV 288
            DD  DPTTYLVSF+E EA Y PLP KL+LRKKR++EGK+++EVEHFPAPS VTVR+RSTV
Sbjct: 596  DDVHDPTTYLVSFDEEEARYAPLPTKLVLRKKRSKEGKTSDEVEHFPAPSRVTVRQRSTV 655

Query: 287  AAIQLKESGNYSDLRDNLLNSKXXXXXXXXXXXXRQQKVAQDQEMDQSSGAE 132
            AAI+LK+SG+YS  R ++ N K            R +K+A+ Q++D+ SGAE
Sbjct: 656  AAIELKDSGDYS--RGSVSNLK-TRRFDVEDTLERPRKIARHQDIDEYSGAE 704


>ref|XP_010256861.1| PREDICTED: RNA polymerase II-associated factor 1 homolog [Nelumbo
            nucifera] gi|720003043|ref|XP_010256862.1| PREDICTED: RNA
            polymerase II-associated factor 1 homolog [Nelumbo
            nucifera] gi|720003046|ref|XP_010256863.1| PREDICTED: RNA
            polymerase II-associated factor 1 homolog [Nelumbo
            nucifera]
          Length = 734

 Score =  635 bits (1638), Expect = e-179
 Identities = 342/604 (56%), Positives = 401/604 (66%), Gaps = 13/604 (2%)
 Frame = -1

Query: 1904 EPALAPMYYPSSQYSQFNHQQLQPLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 1725
            +P   PMYYPSSQYSQF+   + P                                   P
Sbjct: 127  QPPQPPMYYPSSQYSQFHPHSVPPPPMPPPPPPPPSSPPPNSSIPPPPPPLPPPSLPPPP 186

Query: 1724 TISLS-------KESRPDG-----EKGASKEVMGSQLRELGHSNQGAXXXXXXXXXXXXX 1581
                S       KES PDG     ++G  K+  G   RE GHS                 
Sbjct: 187  PPPPSSAPPNQGKESGPDGHGHGHDRGGPKDANGVGWREAGHSRHAIPPKQQKASAAPVP 246

Query: 1580 XXXSNGHLXXXXXXXXXXXXXXXXXETQKHEEKHRLHLKQSQNTVLRKTQMLSSGMRGHG 1401
                NG                   E Q+ EEKHR  LK+SQNTVL KTQMLSSGM+GHG
Sbjct: 247  PGKPNGPAGRVETEEERRLRKKREYEKQRQEEKHRQQLKESQNTVLHKTQMLSSGMKGHG 306

Query: 1400 SISGSRMAERINTPLLSGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLLSLRRDKDRF 1221
            SI GSRM ER  T  LSG+RIENRLKKPTTFLCKLKFRNELPDP+AQPKLL+L  DKDR+
Sbjct: 307  SIVGSRMGERRTTTFLSGDRIENRLKKPTTFLCKLKFRNELPDPTAQPKLLALNTDKDRY 366

Query: 1220 TEYAITSLEKLHKPQLYVETDLGIPLDLLDLSVYNRXXXXXXXXXXXXXXXXXXXXPVTP 1041
            T+YAITSLEK+HKP+L+VE DLGIPLDLLDL+VYN                      +TP
Sbjct: 367  TKYAITSLEKMHKPKLFVEPDLGIPLDLLDLNVYN-PPSVRPPLAPEDEELLRDSESITP 425

Query: 1040 IKKTGIKRKERPTDHGVSWLVRTQYISPLSMEAAKQSLTEKQAKELRETRG-CSILENFN 864
            +K+ GI+RKERPTD GV+WLV+TQYISPLSM+AAKQSLTEKQAKELRETRG  ++L N N
Sbjct: 426  VKQEGIRRKERPTDKGVAWLVKTQYISPLSMDAAKQSLTEKQAKELRETRGGINLLANLN 485

Query: 863  NRESKIQEIEASFEACKSRPVHATNNKLQPVEILPLLPDFDRYNDQFVIATFDSAPTADS 684
            NRE +IQ IE SFEACK  PVHATN  LQPVEILPLLPDF+R +D+FV A FDS PTADS
Sbjct: 486  NREKQIQAIETSFEACKLPPVHATNPNLQPVEILPLLPDFERLDDRFVTAAFDSDPTADS 545

Query: 683  ETYNKLDKSVRDAYESQAIMKSFVATGSDSANPEKFLAYMTPSPDELPKDMYDESEDISF 504
            E Y+KLD+S+RDAYESQAIMKSF+A GSDS  PEKFLAYM PSPDEL KD+YDE+ED+S+
Sbjct: 546  EIYSKLDRSIRDAYESQAIMKSFIAGGSDSTKPEKFLAYMVPSPDELGKDVYDENEDVSY 605

Query: 503  SWVREYHWDVRGDDADDPTTYLVSFNESEACYVPLPMKLILRKKRAREGKSNEEVEHFPA 324
            SWVREYHWDVRGDDADDPTTYLV+F++  A Y+PLP KL+LRKKRA+EG+S++E+EH+P 
Sbjct: 606  SWVREYHWDVRGDDADDPTTYLVTFDDEAARYLPLPTKLVLRKKRAKEGRSSDEIEHYPI 665

Query: 323  PSSVTVRRRSTVAAIQLKESGNYSDLRDNLLNSKXXXXXXXXXXXXRQQKVAQDQEMDQS 144
            PS VTVR R  VA I+++ESG Y + +  + +SK              +      +MD S
Sbjct: 666  PSRVTVRCRPEVAVIEVQESGGYENFKAGISSSKRGRLTTDDGLVRHNKGARVQDDMDHS 725

Query: 143  SGAE 132
            SGAE
Sbjct: 726  SGAE 729


>ref|XP_008222683.1| PREDICTED: RNA polymerase II-associated factor 1 homolog [Prunus
            mume]
          Length = 684

 Score =  633 bits (1633), Expect = e-178
 Identities = 342/588 (58%), Positives = 413/588 (70%), Gaps = 1/588 (0%)
 Frame = -1

Query: 1892 APMYYPSSQYSQFNHQQLQPLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTISL 1713
            APMYY +SQYSQ++HQ +QPL+                                     +
Sbjct: 100  APMYYQNSQYSQYSHQPIQPLQQPSPPPPPPFSPSSSAPPPPPPPGSPPPPPPQSKDGGV 159

Query: 1712 SKESRPDGEKGASKEVMGSQLRELGHSNQGAXXXXXXXXXXXXXXXXSNGHLXXXXXXXX 1533
             + S    EKGAS+EV  S   E GH N G                 +NG          
Sbjct: 160  DRGSH---EKGASREVSVSGRGEHGHLNHGVPQKQHKPPVPSMQVKKANGPPGRLETEEE 216

Query: 1532 XXXXXXXXXETQKHEEKHRLHLKQSQNTVLRKTQMLSSGMRGHGSISGSRMAERINTPLL 1353
                     E Q+ EEKHR  LK SQN+VL+KTQMLSSG +GHGSI+GSRM ER  TP L
Sbjct: 217  RRLRKKREFEKQRQEEKHRQQLKDSQNSVLQKTQMLSSG-KGHGSIAGSRMGERRATPFL 275

Query: 1352 SGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLLSLRRDKDRFTEYAITSLEKLHKPQL 1173
            SGER ENRLKKPTTF+CKLKFRNELPDPSAQPKL+SL++DKD++T+Y ITSLEK +KP+L
Sbjct: 276  SGERTENRLKKPTTFVCKLKFRNELPDPSAQPKLMSLKKDKDQYTKYTITSLEKTYKPKL 335

Query: 1172 YVETDLGIPLDLLDLSVYNRXXXXXXXXXXXXXXXXXXXXPVTPIKKTGIKRKERPTDHG 993
            +VE DLGIPLDLLDLSVYN                       TP+KK GI+RKERPTD G
Sbjct: 336  FVEPDLGIPLDLLDLSVYN-PPSVRPPLALEDEELLRDDVAATPVKKNGIRRKERPTDKG 394

Query: 992  VSWLVRTQYISPLSMEAAKQSLTEKQAKELRETRGC-SILENFNNRESKIQEIEASFEAC 816
            V+WLV+TQYISP+SM++A+QSLTEKQAKELRE +G  +IL+N N+RE +I+EIEASFEAC
Sbjct: 395  VAWLVKTQYISPISMDSARQSLTEKQAKELREMKGGRNILDNLNDRERQIKEIEASFEAC 454

Query: 815  KSRPVHATNNKLQPVEILPLLPDFDRYNDQFVIATFDSAPTADSETYNKLDKSVRDAYES 636
            KSRPV+ATN  L PVE+LPLLPDF+RY DQFV+A FD APTADSE Y+KLD+S  DAYES
Sbjct: 455  KSRPVYATNKNLYPVEVLPLLPDFERYEDQFVLAAFDGAPTADSEIYSKLDQSGHDAYES 514

Query: 635  QAIMKSFVATGSDSANPEKFLAYMTPSPDELPKDMYDESEDISFSWVREYHWDVRGDDAD 456
            +AIMKS+  TG+D ANPEKFLAYM PSP+EL KD YDESED+S+SWVREYH+DVRGDD  
Sbjct: 515  RAIMKSYKVTGADPANPEKFLAYMVPSPNELSKDPYDESEDVSYSWVREYHYDVRGDDVH 574

Query: 455  DPTTYLVSFNESEACYVPLPMKLILRKKRAREGKSNEEVEHFPAPSSVTVRRRSTVAAIQ 276
            DPTTYLVSF+E EA Y PLP KL+LRKKR++EGK+++EVEHFPAPS VTVR+RSTVAAI+
Sbjct: 575  DPTTYLVSFDEEEARYAPLPTKLVLRKKRSKEGKTSDEVEHFPAPSRVTVRQRSTVAAIE 634

Query: 275  LKESGNYSDLRDNLLNSKXXXXXXXXXXXXRQQKVAQDQEMDQSSGAE 132
            LK+SG+YS  R ++ N K            R +K+++ Q++D+ SGAE
Sbjct: 635  LKDSGDYS--RGSVSNLK-TRRFDVEDTLERPRKISRHQDIDEYSGAE 679


>ref|XP_009353546.1| PREDICTED: RNA polymerase II-associated factor 1 homolog [Pyrus x
            bretschneideri]
          Length = 710

 Score =  632 bits (1629), Expect = e-178
 Identities = 337/590 (57%), Positives = 410/590 (69%), Gaps = 1/590 (0%)
 Frame = -1

Query: 1904 EPALAPMYYPSSQYSQFNHQQLQPLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 1725
            +P  AP+YY +SQYSQ++HQ +QP +                                  
Sbjct: 121  QPPQAPIYYQNSQYSQYSHQPIQPSQQPPPPPPPPLSPNSSVPPPPPPPGSPPPPPPQSK 180

Query: 1724 TISLSKESRPDGEKGASKEVMGSQLRELGHSNQGAXXXXXXXXXXXXXXXXSNGHLXXXX 1545
               + + S    +KGAS+E   S+ RE GH N G                 +NG      
Sbjct: 181  DSGVDRRSH---DKGASREASVSRRREHGHLNHGVPPKQQKPPVPSVPVKKANGPPGRVE 237

Query: 1544 XXXXXXXXXXXXXETQKHEEKHRLHLKQSQNTVLRKTQMLSSGMRGHGSISGSRMAERIN 1365
                         E Q+ EEKHR  LK SQN+VL+KTQMLSSG +GHGSI GSRM ER  
Sbjct: 238  TEEERRLRKKREFEKQRQEEKHRQQLKDSQNSVLQKTQMLSSG-KGHGSIVGSRMGERRA 296

Query: 1364 TPLLSGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLLSLRRDKDRFTEYAITSLEKLH 1185
            TP LSGER ENRLKKPTTF+CKLKFRNELPDPSAQPKL+SL+++KD++T+Y ITSLEK +
Sbjct: 297  TPFLSGERTENRLKKPTTFVCKLKFRNELPDPSAQPKLMSLKKEKDQYTKYTITSLEKTY 356

Query: 1184 KPQLYVETDLGIPLDLLDLSVYNRXXXXXXXXXXXXXXXXXXXXP-VTPIKKTGIKRKER 1008
            KP+L+VE DLGIPLDLLDLSVYN                       VTP+KK GI+RKER
Sbjct: 357  KPKLFVEPDLGIPLDLLDLSVYNPPPPSVRLPLAVEDEELLRDDVAVTPVKKDGIRRKER 416

Query: 1007 PTDHGVSWLVRTQYISPLSMEAAKQSLTEKQAKELRETRGCSILENFNNRESKIQEIEAS 828
            PTD GV+WLV+TQYISPLSME+A+QSLTEKQAKELRE +G +ILEN N+RE +I+EIEAS
Sbjct: 417  PTDKGVAWLVKTQYISPLSMESARQSLTEKQAKELREMKGRNILENLNDRERQIKEIEAS 476

Query: 827  FEACKSRPVHATNNKLQPVEILPLLPDFDRYNDQFVIATFDSAPTADSETYNKLDKSVRD 648
            FEACKSRPVHATN  L   E+LPLLPDFDRY+DQFV+A FD APTADSE Y+KLD+S  D
Sbjct: 477  FEACKSRPVHATNKNLYAEEVLPLLPDFDRYDDQFVLAAFDGAPTADSEIYSKLDQSGHD 536

Query: 647  AYESQAIMKSFVATGSDSANPEKFLAYMTPSPDELPKDMYDESEDISFSWVREYHWDVRG 468
            AYES+AIMKS+  TG D ANPEKFLAYM PSP+EL KD YDESED+S+SWVREYH+DVRG
Sbjct: 537  AYESRAIMKSYKVTGVDPANPEKFLAYMVPSPNELSKDPYDESEDVSYSWVREYHYDVRG 596

Query: 467  DDADDPTTYLVSFNESEACYVPLPMKLILRKKRAREGKSNEEVEHFPAPSSVTVRRRSTV 288
            DD  DPTTYLVSF++ EA Y PLP KL+LRKKR++EGK+++EVEHFPAP+ VTVRRR+TV
Sbjct: 597  DDVHDPTTYLVSFDDDEARYAPLPTKLVLRKKRSKEGKTSDEVEHFPAPARVTVRRRATV 656

Query: 287  AAIQLKESGNYSDLRDNLLNSKXXXXXXXXXXXXRQQKVAQDQEMDQSSG 138
            A+I+LK++G+YS    + L ++            R QK+A+ Q++D+ SG
Sbjct: 657  ASIELKDAGDYSTGSVSKLKTR---GYDVEDTLERPQKIARHQDLDEYSG 703


>ref|XP_010098144.1| hypothetical protein L484_026278 [Morus notabilis]
            gi|587885724|gb|EXB74581.1| hypothetical protein
            L484_026278 [Morus notabilis]
          Length = 697

 Score =  630 bits (1624), Expect = e-177
 Identities = 339/589 (57%), Positives = 412/589 (69%), Gaps = 3/589 (0%)
 Frame = -1

Query: 1889 PMYYPSSQYSQFNHQQ-LQPLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTISL 1713
            P YYP SQ+ Q+N+ Q +QPL+                                     L
Sbjct: 112  PAYYPPSQFPQYNNPQPMQPLQQPPPPPPPPSSPPPPPSSPPPPPPPQSQGKENVHHRGL 171

Query: 1712 SKESRPDGEKGASKEVMGSQLRELGHSNQ-GAXXXXXXXXXXXXXXXXSNGHLXXXXXXX 1536
             +  R     G SKEV GS  RE G+SN  G                 SNG +       
Sbjct: 172  QERDR-----GVSKEVAGSGRREHGYSNHHGTHHKQHKYPVPSVPVKKSNGPMGRVETEE 226

Query: 1535 XXXXXXXXXXETQKHEEKHRLHLKQSQNTVLRKTQMLSSGMRGHGSISGSRMAERINTPL 1356
                      E QK EEKHR HLK+SQ++ L+KTQ+LS+  +GHGSI+GSRM ER  T  
Sbjct: 227  ERRLRKKREFEKQKQEEKHRQHLKESQHSALQKTQILSAA-KGHGSIAGSRMGERRATSF 285

Query: 1355 LSGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLLSLRRDKDRFTEYAITSLEKLHKPQ 1176
            LSGERIENRLKKPTTFLCKLKFRNELPDPSAQPKL+S++R+KD++++Y ITSLEK +KP+
Sbjct: 286  LSGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLMSMKREKDQYSKYTITSLEKTYKPK 345

Query: 1175 LYVETDLGIPLDLLDLSVYNRXXXXXXXXXXXXXXXXXXXXPVTPIKKTGIKRKERPTDH 996
            L+VE DLGIPL+LLDLSVYN                      VTP+KK GIKRKERPTD 
Sbjct: 346  LFVEPDLGIPLNLLDLSVYN-PPSVRPPLDPEDEELLRDDEAVTPVKKDGIKRKERPTDK 404

Query: 995  GVSWLVRTQYISPLSMEAAKQSLTEKQAKELRETRGC-SILENFNNRESKIQEIEASFEA 819
            GV+WLV+TQYISPLSME+ KQSLTEKQAKELRE +G  +ILEN N+R+ +I+EI+ASFEA
Sbjct: 405  GVAWLVKTQYISPLSMESTKQSLTEKQAKELRELKGGRNILENLNDRDRQIKEIQASFEA 464

Query: 818  CKSRPVHATNNKLQPVEILPLLPDFDRYNDQFVIATFDSAPTADSETYNKLDKSVRDAYE 639
            CKSRPVHATN  L PVE+LPLLPDFDRY+DQFV+A FDSAPTADSE Y+K+D+S+RDA+E
Sbjct: 465  CKSRPVHATNKSLYPVEVLPLLPDFDRYDDQFVLAAFDSAPTADSEVYSKMDQSIRDAHE 524

Query: 638  SQAIMKSFVATGSDSANPEKFLAYMTPSPDELPKDMYDESEDISFSWVREYHWDVRGDDA 459
            SQA++KS+  TGSD  NPEKFLAYM PSPDEL KD+YDE ED+S+SWVREYHWDVRGDDA
Sbjct: 525  SQAVLKSYKVTGSDPGNPEKFLAYMVPSPDELSKDIYDEHEDVSYSWVREYHWDVRGDDA 584

Query: 458  DDPTTYLVSFNESEACYVPLPMKLILRKKRAREGKSNEEVEHFPAPSSVTVRRRSTVAAI 279
            DDPTTYLVSF+E+EA Y+PLP KL+LRKKRA+EG+S +EVEHFP P+ VTVRRR TV+ +
Sbjct: 585  DDPTTYLVSFDETEARYLPLPTKLVLRKKRAKEGRSGDEVEHFPVPARVTVRRRPTVSVV 644

Query: 278  QLKESGNYSDLRDNLLNSKXXXXXXXXXXXXRQQKVAQDQEMDQSSGAE 132
            +LK++  YS+ R +L N K            R  KVA+ +++D+ SGAE
Sbjct: 645  ELKDAEVYSNPRGSLSNFK-RGGSDVEDGLERSHKVARQEDVDEYSGAE 692


>ref|XP_008367453.1| PREDICTED: RNA polymerase II-associated factor 1 homolog [Malus
            domestica]
          Length = 710

 Score =  629 bits (1623), Expect = e-177
 Identities = 338/592 (57%), Positives = 409/592 (69%), Gaps = 1/592 (0%)
 Frame = -1

Query: 1904 EPALAPMYYPSSQYSQFNHQQLQPLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 1725
            +P  APMYY +SQYSQ++HQ +QP +                                  
Sbjct: 121  QPPQAPMYYQNSQYSQYSHQPIQPSQQPLPPPPPPLSPNSSVPPPPPPPGSPPPPPPQSK 180

Query: 1724 TISLSKESRPDGEKGASKEVMGSQLRELGHSNQGAXXXXXXXXXXXXXXXXSNGHLXXXX 1545
               + + S    +KGAS+E   S  RE GH N G                 +NG      
Sbjct: 181  DSGVDRGSH---DKGASREASLSGRRERGHLNHGVPEKQQKPPVPSVPAKKANGPPGRVE 237

Query: 1544 XXXXXXXXXXXXXETQKHEEKHRLHLKQSQNTVLRKTQMLSSGMRGHGSISGSRMAERIN 1365
                         E Q+ EEKHR  LK SQN+VL+KT MLSSG +GHGSI GSRM ER  
Sbjct: 238  TEEERRLRKKREFEKQRQEEKHRQQLKDSQNSVLQKTHMLSSG-KGHGSIVGSRMGERRA 296

Query: 1364 TPLLSGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLLSLRRDKDRFTEYAITSLEKLH 1185
            TP LSGER ENRLKKPTTF+CKLKFRNELPDPSAQPKL+SL+++KD++T+Y ITSLEK +
Sbjct: 297  TPFLSGERTENRLKKPTTFVCKLKFRNELPDPSAQPKLMSLKKEKDQYTKYTITSLEKTY 356

Query: 1184 KPQLYVETDLGIPLDLLDLSVYNRXXXXXXXXXXXXXXXXXXXXP-VTPIKKTGIKRKER 1008
            KP+L+VE DLGIPLDLLDLSVYN                       VTP+KK GI+RKER
Sbjct: 357  KPKLFVEPDLGIPLDLLDLSVYNPPPPSVRLPLALEDEELLRDDVAVTPVKKDGIRRKER 416

Query: 1007 PTDHGVSWLVRTQYISPLSMEAAKQSLTEKQAKELRETRGCSILENFNNRESKIQEIEAS 828
            PTD GV+WLV+TQYISPLSME+A+QSLTEKQAKELRE +G +ILEN N+RE +I+EIEAS
Sbjct: 417  PTDKGVAWLVKTQYISPLSMESARQSLTEKQAKELREMKGRNILENLNDRERQIKEIEAS 476

Query: 827  FEACKSRPVHATNNKLQPVEILPLLPDFDRYNDQFVIATFDSAPTADSETYNKLDKSVRD 648
            FEACKSRPVHATN  L   E+LPLLPDFDRY+DQFV+A+FD APTADSE Y+KLD+SV D
Sbjct: 477  FEACKSRPVHATNKNLYAEEVLPLLPDFDRYDDQFVLASFDGAPTADSEIYSKLDQSVHD 536

Query: 647  AYESQAIMKSFVATGSDSANPEKFLAYMTPSPDELPKDMYDESEDISFSWVREYHWDVRG 468
            AYES+AIMKS+  TG D ANPEKFLAYM PSP+EL KD YDESED+S+SWVREYH+DVRG
Sbjct: 537  AYESRAIMKSYKVTGVDPANPEKFLAYMVPSPNELSKDPYDESEDVSYSWVREYHYDVRG 596

Query: 467  DDADDPTTYLVSFNESEACYVPLPMKLILRKKRAREGKSNEEVEHFPAPSSVTVRRRSTV 288
            DD  DPTTYLVSF++ EA Y PLP KL+LRKKR++EGK+++EVEHFPAP+ VTVRRR TV
Sbjct: 597  DDVHDPTTYLVSFDDDEARYAPLPTKLVLRKKRSKEGKTSDEVEHFPAPARVTVRRRPTV 656

Query: 287  AAIQLKESGNYSDLRDNLLNSKXXXXXXXXXXXXRQQKVAQDQEMDQSSGAE 132
            A+I+LK++G+Y  LR + ++              R QK+A+  +MD+ SG +
Sbjct: 657  ASIELKDAGDY--LRGS-VSKLRTRGYDVEDTLERPQKIARHHDMDEYSGGD 705


>ref|XP_008348493.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II-associated factor 1
            homolog [Malus domestica]
          Length = 709

 Score =  629 bits (1623), Expect = e-177
 Identities = 340/595 (57%), Positives = 411/595 (69%), Gaps = 4/595 (0%)
 Frame = -1

Query: 1904 EPALAPMYYPSSQYSQFNHQQLQPLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 1725
            +P  AP+YY +SQYSQ++HQ +QP +                                  
Sbjct: 121  QPPQAPIYYQNSQYSQYSHQPIQPXQPPPPPPPPLSPNSSVPPPPPPPGSPPPPPPQ--- 177

Query: 1724 TISLSKES---RPDGEKGASKEVMGSQLRELGHSNQGAXXXXXXXXXXXXXXXXSNGHLX 1554
                SK+S   R   +KGAS+E   S+ RE GH N G                 +NG   
Sbjct: 178  ----SKDSGVDRRSHDKGASREASVSRRREHGHLNHGVPPKQQKPPVPSVPVKKANGPPG 233

Query: 1553 XXXXXXXXXXXXXXXXETQKHEEKHRLHLKQSQNTVLRKTQMLSSGMRGHGSISGSRMAE 1374
                            E Q+ EEKH   LK SQN+VL+KTQMLSSG +GHGSI GSRM E
Sbjct: 234  RVETEEERRLRKKREFEKQRQEEKHXQQLKDSQNSVLQKTQMLSSG-KGHGSIVGSRMGE 292

Query: 1373 RINTPLLSGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLLSLRRDKDRFTEYAITSLE 1194
            R  TP LSGER ENRLKKPTTF+CKLKFRNELPDPSAQPKL+SL+++ D++T+Y ITSLE
Sbjct: 293  RRATPFLSGERTENRLKKPTTFVCKLKFRNELPDPSAQPKLMSLKKENDQYTKYTITSLE 352

Query: 1193 KLHKPQLYVETDLGIPLDLLDLSVYNRXXXXXXXXXXXXXXXXXXXXP-VTPIKKTGIKR 1017
            K +KP+L+VE DLGIPLDLLDLSVYN                       VTP+KK GI+R
Sbjct: 353  KTYKPKLFVEPDLGIPLDLLDLSVYNPPPPSVRLPLALEDEELLRDDVAVTPVKKDGIRR 412

Query: 1016 KERPTDHGVSWLVRTQYISPLSMEAAKQSLTEKQAKELRETRGCSILENFNNRESKIQEI 837
            KERPTD GV+WLV+TQYISPLSME+A+QSLTEKQAKELRE +G +ILEN N+RE +I+EI
Sbjct: 413  KERPTDKGVAWLVKTQYISPLSMESARQSLTEKQAKELREMKGRNILENLNDRERQIKEI 472

Query: 836  EASFEACKSRPVHATNNKLQPVEILPLLPDFDRYNDQFVIATFDSAPTADSETYNKLDKS 657
            EASFEACKSRPVHATN  L   E+LPLLPDFDRY+DQFV+A FD APTADSE Y+KLD+S
Sbjct: 473  EASFEACKSRPVHATNKNLYAEEVLPLLPDFDRYDDQFVLAAFDGAPTADSEIYSKLDQS 532

Query: 656  VRDAYESQAIMKSFVATGSDSANPEKFLAYMTPSPDELPKDMYDESEDISFSWVREYHWD 477
              DAYES+AIMKS+  TG D ANPEKFLAYM PSP+EL KD YDESED+S+SWVREYH+D
Sbjct: 533  GHDAYESRAIMKSYKVTGVDPANPEKFLAYMVPSPNELSKDPYDESEDVSYSWVREYHYD 592

Query: 476  VRGDDADDPTTYLVSFNESEACYVPLPMKLILRKKRAREGKSNEEVEHFPAPSSVTVRRR 297
            VRGDD  DPTTYLVSF++ EA Y PLP KL+LRKKR++EGK+++EVEHFPAP+ VTVRRR
Sbjct: 593  VRGDDVHDPTTYLVSFDDDEARYAPLPTKLVLRKKRSKEGKTSDEVEHFPAPARVTVRRR 652

Query: 296  STVAAIQLKESGNYSDLRDNLLNSKXXXXXXXXXXXXRQQKVAQDQEMDQSSGAE 132
            STVA+I+LK++G+YS    + L ++            R QK+A+ Q+MD+ SG +
Sbjct: 653  STVASIELKDAGDYSRGSISKLKTR---GYDVEDTLERPQKIARHQDMDEYSGGD 704


>ref|XP_009342534.1| PREDICTED: RNA polymerase II-associated factor 1 homolog [Pyrus x
            bretschneideri]
          Length = 710

 Score =  626 bits (1615), Expect = e-176
 Identities = 334/592 (56%), Positives = 409/592 (69%), Gaps = 1/592 (0%)
 Frame = -1

Query: 1904 EPALAPMYYPSSQYSQFNHQQLQPLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 1725
            +P  AP+YY +SQYSQ++HQ +QP +                                  
Sbjct: 121  QPPQAPIYYQNSQYSQYSHQPIQPSQQPPPPPPPPLSPNSSVPPPPPPPGSPPPPPPQSK 180

Query: 1724 TISLSKESRPDGEKGASKEVMGSQLRELGHSNQGAXXXXXXXXXXXXXXXXSNGHLXXXX 1545
               + + S    +KGAS+E   S+ RE GH N G                 +NG      
Sbjct: 181  DSGVDRRSH---DKGASREASVSRRREHGHLNHGVPPKQQKPPVPSVPVKKANGPPGRVE 237

Query: 1544 XXXXXXXXXXXXXETQKHEEKHRLHLKQSQNTVLRKTQMLSSGMRGHGSISGSRMAERIN 1365
                         E Q+ EEKHR  LK SQN+VL+K+QMLSSG +GHGSI GSRM ER  
Sbjct: 238  TEEERRLRKKREFEKQRQEEKHRQQLKDSQNSVLQKSQMLSSG-KGHGSIVGSRMGERRA 296

Query: 1364 TPLLSGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLLSLRRDKDRFTEYAITSLEKLH 1185
            TP LSGER ENRLKKPTTF+CKLKFRNELPDPSAQPKL+SL+++KD++T+Y ITSLEK +
Sbjct: 297  TPFLSGERTENRLKKPTTFVCKLKFRNELPDPSAQPKLMSLKKEKDQYTKYTITSLEKTY 356

Query: 1184 KPQLYVETDLGIPLDLLDLSVYNRXXXXXXXXXXXXXXXXXXXXP-VTPIKKTGIKRKER 1008
            KP+L+VE DLGIPLDLLDLSVYN                       VTP+KK GI+RKER
Sbjct: 357  KPKLFVEPDLGIPLDLLDLSVYNPPPPSVRLPLAVEDEELLQDDVAVTPVKKDGIRRKER 416

Query: 1007 PTDHGVSWLVRTQYISPLSMEAAKQSLTEKQAKELRETRGCSILENFNNRESKIQEIEAS 828
            PTD GV+WLV+TQYISPLSM++A+QSLTEKQAKELRE +G +ILEN N+RE +I+EIEAS
Sbjct: 417  PTDKGVAWLVKTQYISPLSMDSARQSLTEKQAKELREMKGRNILENLNDRERQIKEIEAS 476

Query: 827  FEACKSRPVHATNNKLQPVEILPLLPDFDRYNDQFVIATFDSAPTADSETYNKLDKSVRD 648
            FEACKS PVHATN  L   E+LPLLPDF RY+DQFV+A FD APTADSE Y+KLD+S  D
Sbjct: 477  FEACKSHPVHATNKNLYAEEVLPLLPDFHRYDDQFVLAAFDGAPTADSEIYSKLDQSGHD 536

Query: 647  AYESQAIMKSFVATGSDSANPEKFLAYMTPSPDELPKDMYDESEDISFSWVREYHWDVRG 468
            AYES+AIMKS+  TG D ANPEKFLAYM PSP+EL KD YDESED+S+SWVREYH+DVRG
Sbjct: 537  AYESRAIMKSYKVTGVDPANPEKFLAYMVPSPNELSKDPYDESEDVSYSWVREYHYDVRG 596

Query: 467  DDADDPTTYLVSFNESEACYVPLPMKLILRKKRAREGKSNEEVEHFPAPSSVTVRRRSTV 288
            DD  DPTTYLVSF++ EA Y PLP KL+LRKKR++EGK+++EVEHFPAP+ VTVRRRSTV
Sbjct: 597  DDVHDPTTYLVSFDDDEARYAPLPTKLVLRKKRSKEGKTSDEVEHFPAPARVTVRRRSTV 656

Query: 287  AAIQLKESGNYSDLRDNLLNSKXXXXXXXXXXXXRQQKVAQDQEMDQSSGAE 132
            A+I+LK++G+YS    + L ++            R QK+A+ Q++D+ SG +
Sbjct: 657  ASIELKDAGDYSTGSVSKLKTR---GYDVEDTLERPQKIARHQDLDEYSGGD 705


>ref|XP_006465692.1| PREDICTED: RNA polymerase II-associated factor 1 homolog isoform X1
            [Citrus sinensis]
          Length = 576

 Score =  622 bits (1604), Expect = e-175
 Identities = 319/456 (69%), Positives = 370/456 (81%), Gaps = 1/456 (0%)
 Frame = -1

Query: 1496 KHEEKHRLHLKQSQNTVLRKTQMLSSGMRGHGSISGSRMAERINTPLLSGERIENRLKKP 1317
            + EEKHRL +K+SQN V++K+QM++SG  GHGS++GSRM +R   PLLSGERIENRLKKP
Sbjct: 118  RQEEKHRLQMKESQNVVMQKSQMVASGKGGHGSMAGSRMGDRRAAPLLSGERIENRLKKP 177

Query: 1316 TTFLCKLKFRNELPDPSAQPKLLSLRRDKDRFTEYAITSLEKLHKPQLYVETDLGIPLDL 1137
            TTFLCKLKFRNELP+PSAQPKL++L++DKDRFT Y  +SLEK +KPQL+VE DLGIPLDL
Sbjct: 178  TTFLCKLKFRNELPEPSAQPKLMALKKDKDRFTRYTFSSLEKNYKPQLHVEPDLGIPLDL 237

Query: 1136 LDLSVYNRXXXXXXXXXXXXXXXXXXXXPVTPIKKTGIKRKERPTDHGVSWLVRTQYISP 957
            LDLSVYN                      VTP+KK GIKRKERPTD GVSWLV+TQYISP
Sbjct: 238  LDLSVYN-PPSVRPPLDPEDEELLRDDEVVTPVKKDGIKRKERPTDKGVSWLVKTQYISP 296

Query: 956  LSMEAAKQSLTEKQAKELRETRGC-SILENFNNRESKIQEIEASFEACKSRPVHATNNKL 780
            LSME+A+QSLTEKQAKELRE +G  SILEN N+RE +I+EIEASFEACK RP+HATN  L
Sbjct: 297  LSMESARQSLTEKQAKELREMKGGRSILENLNDRERQIKEIEASFEACKLRPIHATNKNL 356

Query: 779  QPVEILPLLPDFDRYNDQFVIATFDSAPTADSETYNKLDKSVRDAYESQAIMKSFVATGS 600
            QPVEILPLLPDF+RY+DQFV ATFD APTADSE Y+K+DKSVRDA+ES+AIMKS+VATGS
Sbjct: 357  QPVEILPLLPDFERYDDQFVAATFDGAPTADSEIYSKMDKSVRDAHESRAIMKSYVATGS 416

Query: 599  DSANPEKFLAYMTPSPDELPKDMYDESEDISFSWVREYHWDVRGDDADDPTTYLVSFNES 420
            DSANPEKFLAYM PS +EL KDMYDE+ED+SFSWVREYHWDVRGDDADDPTTYLVSF++ 
Sbjct: 417  DSANPEKFLAYMVPSVNELSKDMYDENEDVSFSWVREYHWDVRGDDADDPTTYLVSFDDD 476

Query: 419  EACYVPLPMKLILRKKRAREGKSNEEVEHFPAPSSVTVRRRSTVAAIQLKESGNYSDLRD 240
            EA YVPLP KL LRKKRA EG+SN+EVEHFP PSS+ VRRR+ V AI+LKE G YS+ + 
Sbjct: 477  EARYVPLPTKLNLRKKRAIEGRSNDEVEHFPIPSSIAVRRRANVTAIELKEQGAYSNSKG 536

Query: 239  NLLNSKXXXXXXXXXXXXRQQKVAQDQEMDQSSGAE 132
            N  +SK            R    ++ Q+  QSSGAE
Sbjct: 537  NSSSSK-MGRVDSQEDLERSHNGSRHQDPYQSSGAE 571


>ref|XP_006426877.1| hypothetical protein CICLE_v10025066mg [Citrus clementina]
            gi|557528867|gb|ESR40117.1| hypothetical protein
            CICLE_v10025066mg [Citrus clementina]
            gi|641832760|gb|KDO51787.1| hypothetical protein
            CISIN_1g005794mg [Citrus sinensis]
          Length = 677

 Score =  619 bits (1597), Expect = e-174
 Identities = 318/456 (69%), Positives = 368/456 (80%), Gaps = 1/456 (0%)
 Frame = -1

Query: 1496 KHEEKHRLHLKQSQNTVLRKTQMLSSGMRGHGSISGSRMAERINTPLLSGERIENRLKKP 1317
            + EEKHRL +K+SQN V++K+QM++SG  GHGS+ GSRM +R   PLLSGER ENRLKKP
Sbjct: 219  RQEEKHRLQMKESQNVVMQKSQMVASGKGGHGSMVGSRMGDRRAAPLLSGERTENRLKKP 278

Query: 1316 TTFLCKLKFRNELPDPSAQPKLLSLRRDKDRFTEYAITSLEKLHKPQLYVETDLGIPLDL 1137
            TTFLCKLKFRNELP+PSAQPKL++L++DKDRFT Y  +SLEK +KPQL+VE DLGIPLDL
Sbjct: 279  TTFLCKLKFRNELPEPSAQPKLMALKKDKDRFTRYTFSSLEKNYKPQLHVEPDLGIPLDL 338

Query: 1136 LDLSVYNRXXXXXXXXXXXXXXXXXXXXPVTPIKKTGIKRKERPTDHGVSWLVRTQYISP 957
            LDLSVYN                      VTP+KK GIKRKERPTD GVSWLV+TQYISP
Sbjct: 339  LDLSVYN-PPSVRPPLDPEDEELLRDDEVVTPVKKDGIKRKERPTDKGVSWLVKTQYISP 397

Query: 956  LSMEAAKQSLTEKQAKELRETRGC-SILENFNNRESKIQEIEASFEACKSRPVHATNNKL 780
            LSME+A+QSLTEKQAKELRE +G  SILEN N+RE +I+EIEASFEACK RP+HATN  L
Sbjct: 398  LSMESARQSLTEKQAKELREMKGGRSILENLNDRERQIKEIEASFEACKLRPIHATNKNL 457

Query: 779  QPVEILPLLPDFDRYNDQFVIATFDSAPTADSETYNKLDKSVRDAYESQAIMKSFVATGS 600
            QPVEILPLLPDF+RY+DQFV ATFD APTADSE Y+K+DKSVRDA+ES+AIMKS+VATGS
Sbjct: 458  QPVEILPLLPDFERYDDQFVAATFDGAPTADSEIYSKMDKSVRDAHESRAIMKSYVATGS 517

Query: 599  DSANPEKFLAYMTPSPDELPKDMYDESEDISFSWVREYHWDVRGDDADDPTTYLVSFNES 420
            DSANPEKFLAYM PS +EL KDMYDE+ED+SFSWVREYHWDVRGDDADDPTTYLVSF++ 
Sbjct: 518  DSANPEKFLAYMVPSVNELSKDMYDENEDVSFSWVREYHWDVRGDDADDPTTYLVSFDDD 577

Query: 419  EACYVPLPMKLILRKKRAREGKSNEEVEHFPAPSSVTVRRRSTVAAIQLKESGNYSDLRD 240
            EA YVPLP KL LRKKRA EG+SN+EVEHFP PSS+ VRRR+ V AI+LKE G YS+ + 
Sbjct: 578  EARYVPLPTKLNLRKKRAIEGRSNDEVEHFPIPSSIAVRRRANVTAIELKEQGAYSNSKG 637

Query: 239  NLLNSKXXXXXXXXXXXXRQQKVAQDQEMDQSSGAE 132
            N  +SK            R    ++ Q+  QSSGAE
Sbjct: 638  NSSSSK-MGRVDSQEDLERSHNGSRQQDPYQSSGAE 672


>ref|XP_008228451.1| PREDICTED: bromodomain-containing protein 4 [Prunus mume]
          Length = 658

 Score =  618 bits (1593), Expect = e-174
 Identities = 328/520 (63%), Positives = 388/520 (74%), Gaps = 1/520 (0%)
 Frame = -1

Query: 1688 EKGASKEVMGSQLRELGHSNQGAXXXXXXXXXXXXXXXXSNGHLXXXXXXXXXXXXXXXX 1509
            +KGAS+EV  S  RE GH N G                 +NG                  
Sbjct: 139  DKGASREVSVSGRREHGHLNHGVAQKQHKPPVPSMPVKKANGPPGRVETEEERRLRKKRE 198

Query: 1508 XETQKHEEKHRLHLKQSQNTVLRKTQMLSSGMRGHGSISGSRMAERINTPLLSGERIENR 1329
             E Q+ EEKHR  LK SQN+VL+KTQMLSSG +GHGSI+GSRM ER  TP LS ER ENR
Sbjct: 199  FEKQRQEEKHRQQLKDSQNSVLQKTQMLSSG-KGHGSIAGSRMGERRATPFLSSERTENR 257

Query: 1328 LKKPTTFLCKLKFRNELPDPSAQPKLLSLRRDKDRFTEYAITSLEKLHKPQLYVETDLGI 1149
            LKKPTTF+CKLKFRNELPDPSAQPKL+SL++DKD++T+Y ITSLEK +KP+L+VE DLGI
Sbjct: 258  LKKPTTFVCKLKFRNELPDPSAQPKLMSLKKDKDQYTKYTITSLEKTYKPKLFVEPDLGI 317

Query: 1148 PLDLLDLSVYNRXXXXXXXXXXXXXXXXXXXXPVTPIKKTGIKRKERPTDHGVSWLVRTQ 969
            PLDLLDLSVYN                       TP+K  GI+RKERPTD GV+WLV+TQ
Sbjct: 318  PLDLLDLSVYN-PPSVRPPLALEDEELLRDDVAATPVKNNGIRRKERPTDKGVAWLVKTQ 376

Query: 968  YISPLSMEAAKQSLTEKQAKELRETRGC-SILENFNNRESKIQEIEASFEACKSRPVHAT 792
            YISPLSM++A+QSLTEKQAKELRE +G  +IL N N+RE +I+EIEASFEACKSRPVHAT
Sbjct: 377  YISPLSMDSARQSLTEKQAKELREMKGGRNILNNLNDRERQIKEIEASFEACKSRPVHAT 436

Query: 791  NNKLQPVEILPLLPDFDRYNDQFVIATFDSAPTADSETYNKLDKSVRDAYESQAIMKSFV 612
            N  L PVE+LPLLPDF+RY DQFV+A FD APTADSE Y+KLD+S  DAYES+AIMKS+ 
Sbjct: 437  NKNLYPVEVLPLLPDFERYEDQFVLAAFDGAPTADSEIYSKLDQSGHDAYESRAIMKSYK 496

Query: 611  ATGSDSANPEKFLAYMTPSPDELPKDMYDESEDISFSWVREYHWDVRGDDADDPTTYLVS 432
             TG+D ANPEKFLAYM PSP+EL KD YDESED+S+SWVREYH+DVRGDD  DPTTYLVS
Sbjct: 497  VTGADPANPEKFLAYMVPSPNELSKDPYDESEDVSYSWVREYHYDVRGDDVHDPTTYLVS 556

Query: 431  FNESEACYVPLPMKLILRKKRAREGKSNEEVEHFPAPSSVTVRRRSTVAAIQLKESGNYS 252
            F+E EA Y PLP KLILRKKR++EGK+++EVEHFPAPS VTVR+RSTVAAI+LK+SG+YS
Sbjct: 557  FDEEEARYAPLPTKLILRKKRSKEGKTSDEVEHFPAPSRVTVRQRSTVAAIELKDSGDYS 616

Query: 251  DLRDNLLNSKXXXXXXXXXXXXRQQKVAQDQEMDQSSGAE 132
              R ++ N K            R +K+A+ Q++D+ SGAE
Sbjct: 617  --RGSVSNLK-TRRFDVEDTLERPRKIARHQDIDEYSGAE 653


>ref|XP_006465693.1| PREDICTED: RNA polymerase II-associated factor 1 homolog isoform X2
            [Citrus sinensis]
          Length = 570

 Score =  614 bits (1583), Expect = e-172
 Identities = 316/456 (69%), Positives = 365/456 (80%), Gaps = 1/456 (0%)
 Frame = -1

Query: 1496 KHEEKHRLHLKQSQNTVLRKTQMLSSGMRGHGSISGSRMAERINTPLLSGERIENRLKKP 1317
            + EEKHRL +K+SQN V++K+QM++SG  GHGS++GSRM +R   PLLSGERIENRLKKP
Sbjct: 118  RQEEKHRLQMKESQNVVMQKSQMVASGKGGHGSMAGSRMGDRRAAPLLSGERIENRLKKP 177

Query: 1316 TTFLCKLKFRNELPDPSAQPKLLSLRRDKDRFTEYAITSLEKLHKPQLYVETDLGIPLDL 1137
            TTFLCKLKFRNELP+PSAQPKL++L++DKDRFT Y  +SLEK +KPQL+VE DLGIPLDL
Sbjct: 178  TTFLCKLKFRNELPEPSAQPKLMALKKDKDRFTRYTFSSLEKNYKPQLHVEPDLGIPLDL 237

Query: 1136 LDLSVYNRXXXXXXXXXXXXXXXXXXXXPVTPIKKTGIKRKERPTDHGVSWLVRTQYISP 957
            LDLSVYN                      VTP+KK GIKRKERPTD GVSWLV+TQYISP
Sbjct: 238  LDLSVYN-PPSVRPPLDPEDEELLRDDEVVTPVKKDGIKRKERPTDKGVSWLVKTQYISP 296

Query: 956  LSMEAAKQSLTEKQAKELRETRGC-SILENFNNRESKIQEIEASFEACKSRPVHATNNKL 780
            LSME+A+QSLTEKQAKELRE +G  SILEN N+RE +I+EIEASFEACK RP+HATN  L
Sbjct: 297  LSMESARQSLTEKQAKELREMKGGRSILENLNDRERQIKEIEASFEACKLRPIHATNKNL 356

Query: 779  QPVEILPLLPDFDRYNDQFVIATFDSAPTADSETYNKLDKSVRDAYESQAIMKSFVATGS 600
            QPVEILPLLPDF+RY+DQFV ATFD APTADSE Y+K+DKSVRDA+ES+AIMKS+VATGS
Sbjct: 357  QPVEILPLLPDFERYDDQFVAATFDGAPTADSEIYSKMDKSVRDAHESRAIMKSYVATGS 416

Query: 599  DSANPEKFLAYMTPSPDELPKDMYDESEDISFSWVREYHWDVRGDDADDPTTYLVSFNES 420
            DSANPEKFLAYM PS +EL KDMYDE+ED+SFSWVREYHWDVRGDDADDPTTYLVSF++ 
Sbjct: 417  DSANPEKFLAYMVPSVNELSKDMYDENEDVSFSWVREYHWDVRGDDADDPTTYLVSFDDD 476

Query: 419  EACYVPLPMKLILRKKRAREGKSNEEVEHFPAPSSVTVRRRSTVAAIQLKESGNYSDLRD 240
            EA YVPLP KL LRKKRA EG+SN+EVEHFP PSS+ VRRR+ V AI+LKE G  S    
Sbjct: 477  EARYVPLPTKLNLRKKRAIEGRSNDEVEHFPIPSSIAVRRRANVTAIELKEQGGNS---- 532

Query: 239  NLLNSKXXXXXXXXXXXXRQQKVAQDQEMDQSSGAE 132
               +S             R    ++ Q+  QSSGAE
Sbjct: 533  ---SSSKMGRVDSQEDLERSHNGSRHQDPYQSSGAE 565


>gb|KDO51788.1| hypothetical protein CISIN_1g005794mg [Citrus sinensis]
          Length = 671

 Score =  611 bits (1576), Expect = e-172
 Identities = 315/456 (69%), Positives = 363/456 (79%), Gaps = 1/456 (0%)
 Frame = -1

Query: 1496 KHEEKHRLHLKQSQNTVLRKTQMLSSGMRGHGSISGSRMAERINTPLLSGERIENRLKKP 1317
            + EEKHRL +K+SQN V++K+QM++SG  GHGS+ GSRM +R   PLLSGER ENRLKKP
Sbjct: 219  RQEEKHRLQMKESQNVVMQKSQMVASGKGGHGSMVGSRMGDRRAAPLLSGERTENRLKKP 278

Query: 1316 TTFLCKLKFRNELPDPSAQPKLLSLRRDKDRFTEYAITSLEKLHKPQLYVETDLGIPLDL 1137
            TTFLCKLKFRNELP+PSAQPKL++L++DKDRFT Y  +SLEK +KPQL+VE DLGIPLDL
Sbjct: 279  TTFLCKLKFRNELPEPSAQPKLMALKKDKDRFTRYTFSSLEKNYKPQLHVEPDLGIPLDL 338

Query: 1136 LDLSVYNRXXXXXXXXXXXXXXXXXXXXPVTPIKKTGIKRKERPTDHGVSWLVRTQYISP 957
            LDLSVYN                      VTP+KK GIKRKERPTD GVSWLV+TQYISP
Sbjct: 339  LDLSVYN-PPSVRPPLDPEDEELLRDDEVVTPVKKDGIKRKERPTDKGVSWLVKTQYISP 397

Query: 956  LSMEAAKQSLTEKQAKELRETRGC-SILENFNNRESKIQEIEASFEACKSRPVHATNNKL 780
            LSME+A+QSLTEKQAKELRE +G  SILEN N+RE +I+EIEASFEACK RP+HATN  L
Sbjct: 398  LSMESARQSLTEKQAKELREMKGGRSILENLNDRERQIKEIEASFEACKLRPIHATNKNL 457

Query: 779  QPVEILPLLPDFDRYNDQFVIATFDSAPTADSETYNKLDKSVRDAYESQAIMKSFVATGS 600
            QPVEILPLLPDF+RY+DQFV ATFD APTADSE Y+K+DKSVRDA+ES+AIMKS+VATGS
Sbjct: 458  QPVEILPLLPDFERYDDQFVAATFDGAPTADSEIYSKMDKSVRDAHESRAIMKSYVATGS 517

Query: 599  DSANPEKFLAYMTPSPDELPKDMYDESEDISFSWVREYHWDVRGDDADDPTTYLVSFNES 420
            DSANPEKFLAYM PS +EL KDMYDE+ED+SFSWVREYHWDVRGDDADDPTTYLVSF++ 
Sbjct: 518  DSANPEKFLAYMVPSVNELSKDMYDENEDVSFSWVREYHWDVRGDDADDPTTYLVSFDDD 577

Query: 419  EACYVPLPMKLILRKKRAREGKSNEEVEHFPAPSSVTVRRRSTVAAIQLKESGNYSDLRD 240
            EA YVPLP KL LRKKRA EG+SN+EVEHFP PSS+ VRRR+ V AI+LKE G  S    
Sbjct: 578  EARYVPLPTKLNLRKKRAIEGRSNDEVEHFPIPSSIAVRRRANVTAIELKEQGGNS---- 633

Query: 239  NLLNSKXXXXXXXXXXXXRQQKVAQDQEMDQSSGAE 132
               +S             R    ++ Q+  QSSGAE
Sbjct: 634  ---SSSKMGRVDSQEDLERSHNGSRQQDPYQSSGAE 666


>ref|XP_006426878.1| hypothetical protein CICLE_v10025066mg [Citrus clementina]
            gi|557528868|gb|ESR40118.1| hypothetical protein
            CICLE_v10025066mg [Citrus clementina]
          Length = 632

 Score =  609 bits (1571), Expect = e-171
 Identities = 305/413 (73%), Positives = 349/413 (84%), Gaps = 1/413 (0%)
 Frame = -1

Query: 1496 KHEEKHRLHLKQSQNTVLRKTQMLSSGMRGHGSISGSRMAERINTPLLSGERIENRLKKP 1317
            + EEKHRL +K+SQN V++K+QM++SG  GHGS+ GSRM +R   PLLSGER ENRLKKP
Sbjct: 219  RQEEKHRLQMKESQNVVMQKSQMVASGKGGHGSMVGSRMGDRRAAPLLSGERTENRLKKP 278

Query: 1316 TTFLCKLKFRNELPDPSAQPKLLSLRRDKDRFTEYAITSLEKLHKPQLYVETDLGIPLDL 1137
            TTFLCKLKFRNELP+PSAQPKL++L++DKDRFT Y  +SLEK +KPQL+VE DLGIPLDL
Sbjct: 279  TTFLCKLKFRNELPEPSAQPKLMALKKDKDRFTRYTFSSLEKNYKPQLHVEPDLGIPLDL 338

Query: 1136 LDLSVYNRXXXXXXXXXXXXXXXXXXXXPVTPIKKTGIKRKERPTDHGVSWLVRTQYISP 957
            LDLSVYN                      VTP+KK GIKRKERPTD GVSWLV+TQYISP
Sbjct: 339  LDLSVYN-PPSVRPPLDPEDEELLRDDEVVTPVKKDGIKRKERPTDKGVSWLVKTQYISP 397

Query: 956  LSMEAAKQSLTEKQAKELRETRGC-SILENFNNRESKIQEIEASFEACKSRPVHATNNKL 780
            LSME+A+QSLTEKQAKELRE +G  SILEN N+RE +I+EIEASFEACK RP+HATN  L
Sbjct: 398  LSMESARQSLTEKQAKELREMKGGRSILENLNDRERQIKEIEASFEACKLRPIHATNKNL 457

Query: 779  QPVEILPLLPDFDRYNDQFVIATFDSAPTADSETYNKLDKSVRDAYESQAIMKSFVATGS 600
            QPVEILPLLPDF+RY+DQFV ATFD APTADSE Y+K+DKSVRDA+ES+AIMKS+VATGS
Sbjct: 458  QPVEILPLLPDFERYDDQFVAATFDGAPTADSEIYSKMDKSVRDAHESRAIMKSYVATGS 517

Query: 599  DSANPEKFLAYMTPSPDELPKDMYDESEDISFSWVREYHWDVRGDDADDPTTYLVSFNES 420
            DSANPEKFLAYM PS +EL KDMYDE+ED+SFSWVREYHWDVRGDDADDPTTYLVSF++ 
Sbjct: 518  DSANPEKFLAYMVPSVNELSKDMYDENEDVSFSWVREYHWDVRGDDADDPTTYLVSFDDD 577

Query: 419  EACYVPLPMKLILRKKRAREGKSNEEVEHFPAPSSVTVRRRSTVAAIQLKESG 261
            EA YVPLP KL LRKKRA EG+SN+EVEHFP PSS+ VRRR+ V AI+LKE G
Sbjct: 578  EARYVPLPTKLNLRKKRAIEGRSNDEVEHFPIPSSIAVRRRANVTAIELKEQG 630