BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00003164
         (2754 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containi...  1107   0.0  
emb|CBI37948.3| unnamed protein product [Vitis vinifera]             1083   0.0  
ref|XP_010255160.1| PREDICTED: pentatricopeptide repeat-containi...   992   0.0  
ref|XP_007041957.1| Pentatricopeptide repeat-containing protein,...   977   0.0  
ref|XP_010088683.1| hypothetical protein L484_003235 [Morus nota...   969   0.0  
ref|XP_010255161.1| PREDICTED: pentatricopeptide repeat-containi...   968   0.0  
emb|CDO96965.1| unnamed protein product [Coffea canephora]            950   0.0  
ref|XP_006494588.1| PREDICTED: pentatricopeptide repeat-containi...   950   0.0  
ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containi...   950   0.0  
ref|XP_012084399.1| PREDICTED: pentatricopeptide repeat-containi...   941   0.0  
gb|KJB11196.1| hypothetical protein B456_001G246900 [Gossypium r...   935   0.0  
ref|XP_012442072.1| PREDICTED: pentatricopeptide repeat-containi...   935   0.0  
ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Popu...   934   0.0  
ref|XP_011037246.1| PREDICTED: pentatricopeptide repeat-containi...   929   0.0  
ref|XP_011037244.1| PREDICTED: pentatricopeptide repeat-containi...   929   0.0  
ref|XP_009589920.1| PREDICTED: pentatricopeptide repeat-containi...   927   0.0  
ref|XP_002534048.1| pentatricopeptide repeat-containing protein,...   924   0.0  
ref|XP_012442077.1| PREDICTED: pentatricopeptide repeat-containi...   921   0.0  
ref|XP_009799357.1| PREDICTED: pentatricopeptide repeat-containi...   919   0.0  
ref|XP_008236179.1| PREDICTED: pentatricopeptide repeat-containi...   912   0.0  

>ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic [Vitis vinifera]
          Length = 1115

 Score = 1107 bits (2863), Expect = 0.0
 Identities = 587/911 (64%), Positives = 686/911 (75%), Gaps = 4/911 (0%)
 Frame = -1

Query: 2754 LRPPGVRYRRKCKKLGFHIQSP-RFLFRASFNSQXXXXXXXXXXXXXXXIFYLNYSKRKK 2578
            LRPPG+R  +KCK + F IQSP RF F+AS  SQ               + +L+YS+R+K
Sbjct: 44   LRPPGLRSPKKCKNIRFRIQSPSRFYFKASLGSQPVLVVVAVAAVFAFSVVFLSYSRRRK 103

Query: 2577 -VREMSGPSILALSERIRCIMNQGNVDQTSVTEDLEWRMSVTESRNLMK-GRETGHASEN 2404
              RE+SGPS  A+S+  R +MNQ          DL    S  ESR  M    E  HAS++
Sbjct: 104  NSREVSGPSGFAISQLSRDVMNQFMESAILGFGDLHKETSEKESRATMDIVEEVSHASKD 163

Query: 2403 QLVQLQEESVLMHEENLITNPLESHGFDINAYNATDSLSSRDSEVMGPSFPPSVLSESGT 2224
            +    QE + LM EE  +TN  ES   D+ + NA + +S R++E  GPS  P +LSESG 
Sbjct: 164  KEAPWQEIA-LMQEETHVTNTSESSRLDVLSSNAKNCVSVRETEEAGPSILPPLLSESGL 222

Query: 2223 LQSVNFATEMPELEFEVCGQETELRSNMHKLMAREKLTVASAPMDTALKEVNEHNKSNPE 2044
            LQ + FATEMPEL+ E    ETE   ++   + + K   AS P   AL+ VNE       
Sbjct: 223  LQPLVFATEMPELQLEERQMETEFGYDLSTPVVQTKSIAASVPDIIALEGVNERKNRGGR 282

Query: 2043 LGKESETISCVSNFKDSVREELYMFYEANRSALKCLANLNGSNTLSSHASVRDSKTFSL- 1867
             G+ESE IS    F+D++REELY FYEA +S +K + N NG  TL+S+AS+ D    S  
Sbjct: 283  PGEESEIISFTGIFRDTIREELYTFYEAKQSVMKPMPNFNGIKTLASNASLLDGNGVSFQ 342

Query: 1866 IRCSTTKGVESLAKEFLYTAENFKGKTPLGLYKEGSPHERKDLGKSRGFSRDKGNRILPQ 1687
            +R +T+K  E  A+    +A+  +GK  L  YKEGS  +R DL K +GF RDK  R+ P 
Sbjct: 343  MRNATSKEAELSAQNSHSSADYVEGKMSLSCYKEGSSGKRNDLVKGKGFPRDKNGRLPPL 402

Query: 1686 NGHRNFPHSPHPNGKDVDDTHNLAHKSSAYNRFLRNGRLIDCVELLEDMERNGLLDMDKV 1507
            + HRN    P  NG  V + ++ + K SAYNR L  GRL DC++LLEDME+ GLLDMDKV
Sbjct: 403  SDHRNLSQFPLSNGMTVKEKYHDSEKFSAYNRLLSEGRLSDCIQLLEDMEKMGLLDMDKV 462

Query: 1506 YHAGFFKICKNQKAVKEAFRFIKLIPNPTLSTFNMLMSVCAISQDSEGAFQVLHLVQEAG 1327
            YHA FFKIC++QKAV EAFRF KLIP PTLSTFNMLMSVCA SQDS GAFQVL LV+EAG
Sbjct: 463  YHAKFFKICRSQKAVTEAFRFAKLIPTPTLSTFNMLMSVCATSQDSAGAFQVLQLVREAG 522

Query: 1326 LKADCKLYTTLISTCAKTGKVDTMFKVFHEMVNAEVEPNVHTYGALIDGCAKAGQVAKAF 1147
            LKADCKLYTTLISTCAK+GKVD MF+VFHEMVNAEVEPNVHTYGALIDGC +AGQVAKAF
Sbjct: 523  LKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAF 582

Query: 1146 GAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHVTVGALIK 967
            GAYGIMRSK V+PDRVVFNALITACGQSGAVDRAFDVLAEMRAE QPIDPDH+TVGALIK
Sbjct: 583  GAYGIMRSKKVEPDRVVFNALITACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIK 642

Query: 966  ACANAGQVERAREVYNMIHEYNIKGTPEVYTIAVNSCSRTGDWEFACHVYSDMTRKGVAP 787
            AC NAGQV+RAREVY MI +YNIKGTPEVYTIAV+S S+ GDWEFA  VY+DMTRKGV P
Sbjct: 643  ACTNAGQVDRAREVYKMIDQYNIKGTPEVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVP 702

Query: 786  DEMFFSALIDVAGHARKLDNAFDVLQKARDQGVHIGIISYSSLMGACSNAKNWQKAVELY 607
            DEMF SALIDVAGHA KLD AF+V+Q+AR QG+ +GI+SYSSLMGACSNAKNWQKA+ELY
Sbjct: 703  DEMFLSALIDVAGHAGKLDAAFEVIQEARIQGIPLGIVSYSSLMGACSNAKNWQKALELY 762

Query: 606  EDIKSIKLKPTVSTMNALITSLCDGEQLQKAVDVLSEMKRVGLCPNTITYSILFVASEKK 427
             DIKS+KL PTVSTMNALIT+LC+GEQL+KA++VLS+MKR GLCPNTITYSIL VASEKK
Sbjct: 763  VDIKSMKLNPTVSTMNALITALCEGEQLEKAMEVLSDMKRAGLCPNTITYSILLVASEKK 822

Query: 426  DDLEVGMSLFSQAKRDGVAPNLVMCRCLIAMCLRRFEKACALGEPVLSFNSGHPQIDSKW 247
            DD++VG+ + SQA++D VAPNLVMCRCL+ MCLRRFEKACALGEPVLSFNSG PQID+KW
Sbjct: 823  DDIDVGLMILSQARKDSVAPNLVMCRCLVGMCLRRFEKACALGEPVLSFNSGRPQIDNKW 882

Query: 246  TSLALMVYREAIVAGVVPTMEECSQVLGCLKLPYDASLRNRLTENLQVSFVTSRSSNLFS 67
            TS ALMVYRE + AGV+PTME  SQVLGCL+ P D SLRNRL ENL VS   SR SNL S
Sbjct: 883  TSSALMVYRETVSAGVIPTMELLSQVLGCLQFPRDVSLRNRLIENLGVSADASRRSNLCS 942

Query: 66   LVDGFGEYDPR 34
            L+DGFGEYD R
Sbjct: 943  LIDGFGEYDSR 953


>emb|CBI37948.3| unnamed protein product [Vitis vinifera]
          Length = 1550

 Score = 1083 bits (2802), Expect = 0.0
 Identities = 577/897 (64%), Positives = 673/897 (75%), Gaps = 4/897 (0%)
 Frame = -1

Query: 2712 LGFHIQSP-RFLFRASFNSQXXXXXXXXXXXXXXXIFYLNYSKRKK-VREMSGPSILALS 2539
            L F   SP RF F+AS  SQ               + +L+YS+R+K  RE+SGPS  A+S
Sbjct: 493  LAFTSSSPSRFYFKASLGSQPVLVVVAVAAVFAFSVVFLSYSRRRKNSREVSGPSGFAIS 552

Query: 2538 ERIRCIMNQGNVDQTSVTEDLEWRMSVTESRNLMK-GRETGHASENQLVQLQEESVLMHE 2362
            +  R +MNQ          DL    S  ESR  M    E  HAS+++    QE + LM E
Sbjct: 553  QLSRDVMNQFMESAILGFGDLHKETSEKESRATMDIVEEVSHASKDKEAPWQEIA-LMQE 611

Query: 2361 ENLITNPLESHGFDINAYNATDSLSSRDSEVMGPSFPPSVLSESGTLQSVNFATEMPELE 2182
            E  +TN  ES   D+ + NA + +S R++E  GPS  P +LSESG LQ + FATEMPEL+
Sbjct: 612  ETHVTNTSESSRLDVLSSNAKNCVSVRETEEAGPSILPPLLSESGLLQPLVFATEMPELQ 671

Query: 2181 FEVCGQETELRSNMHKLMAREKLTVASAPMDTALKEVNEHNKSNPELGKESETISCVSNF 2002
             E    ETE   ++   + + K   AS P   AL+ VNE        G+ESE IS    F
Sbjct: 672  LEERQMETEFGYDLSTPVVQTKSIAASVPDIIALEGVNERKNRGGRPGEESEIISFTGIF 731

Query: 2001 KDSVREELYMFYEANRSALKCLANLNGSNTLSSHASVRDSKTFSL-IRCSTTKGVESLAK 1825
            +D++REELY FYEA +S +K + N NG  TL+S+AS+ D    S  +R +T+K  E  A+
Sbjct: 732  RDTIREELYTFYEAKQSVMKPMPNFNGIKTLASNASLLDGNGVSFQMRNATSKEAELSAQ 791

Query: 1824 EFLYTAENFKGKTPLGLYKEGSPHERKDLGKSRGFSRDKGNRILPQNGHRNFPHSPHPNG 1645
                +A+  +GK  L  YKEGS  +R DL K +GF RDK  R+ P + HRN    P  NG
Sbjct: 792  NSHSSADYVEGKMSLSCYKEGSSGKRNDLVKGKGFPRDKNGRLPPLSDHRNLSQFPLSNG 851

Query: 1644 KDVDDTHNLAHKSSAYNRFLRNGRLIDCVELLEDMERNGLLDMDKVYHAGFFKICKNQKA 1465
              V + ++ + K SAYNR L  GRL DC++LLEDME+ GLLDMDKVYHA FFKIC++QKA
Sbjct: 852  MTVKEKYHDSEKFSAYNRLLSEGRLSDCIQLLEDMEKMGLLDMDKVYHAKFFKICRSQKA 911

Query: 1464 VKEAFRFIKLIPNPTLSTFNMLMSVCAISQDSEGAFQVLHLVQEAGLKADCKLYTTLIST 1285
            V EAFRF KLIP PTLSTFNMLMSVCA SQDS GAFQVL LV+EAGLKADCKLYTTLIST
Sbjct: 912  VTEAFRFAKLIPTPTLSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLIST 971

Query: 1284 CAKTGKVDTMFKVFHEMVNAEVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPD 1105
            CAK+GKVD MF+VFHEMVNAEVEPNVHTYGALIDGC +AGQVAKAFGAYGIMRSK V+PD
Sbjct: 972  CAKSGKVDAMFEVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPD 1031

Query: 1104 RVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHVTVGALIKACANAGQVERAREV 925
            RVVFNALITACGQSGAVDRAFDVLAEMRAE QPIDPDH+TVGALIKAC NAGQV+RAREV
Sbjct: 1032 RVVFNALITACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREV 1091

Query: 924  YNMIHEYNIKGTPEVYTIAVNSCSRTGDWEFACHVYSDMTRKGVAPDEMFFSALIDVAGH 745
            Y MI +YNIKGTPEVYTIAV+S S+ GDWEFA  VY+DMTRKGV PDEMF SALIDVAGH
Sbjct: 1092 YKMIDQYNIKGTPEVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGH 1151

Query: 744  ARKLDNAFDVLQKARDQGVHIGIISYSSLMGACSNAKNWQKAVELYEDIKSIKLKPTVST 565
            A KLD AF+V+Q+AR QG+ +GI+SYSSLMGACSNAKNWQKA+ELY DIKS+KL PTVST
Sbjct: 1152 AGKLDAAFEVIQEARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVST 1211

Query: 564  MNALITSLCDGEQLQKAVDVLSEMKRVGLCPNTITYSILFVASEKKDDLEVGMSLFSQAK 385
            MNALIT+LC+GEQL+KA++VLS+MKR GLCPNTITYSIL VASEKKDD++VG+ + SQA+
Sbjct: 1212 MNALITALCEGEQLEKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILSQAR 1271

Query: 384  RDGVAPNLVMCRCLIAMCLRRFEKACALGEPVLSFNSGHPQIDSKWTSLALMVYREAIVA 205
            +D VAPNLVMCRCL+ MCLRRFEKACALGEPVLSFNSG PQID+KWTS ALMVYRE + A
Sbjct: 1272 KDSVAPNLVMCRCLVGMCLRRFEKACALGEPVLSFNSGRPQIDNKWTSSALMVYRETVSA 1331

Query: 204  GVVPTMEECSQVLGCLKLPYDASLRNRLTENLQVSFVTSRSSNLFSLVDGFGEYDPR 34
            GV+PTME  SQVLGCL+ P D SLRNRL ENL VS   SR SNL SL+DGFGEYD R
Sbjct: 1332 GVIPTMELLSQVLGCLQFPRDVSLRNRLIENLGVSADASRRSNLCSLIDGFGEYDSR 1388


>ref|XP_010255160.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Nelumbo nucifera]
          Length = 1161

 Score =  992 bits (2565), Expect = 0.0
 Identities = 534/920 (58%), Positives = 655/920 (71%), Gaps = 13/920 (1%)
 Frame = -1

Query: 2754 LRPPGVRYRRKCKKLGFHIQSPRFLFRASFNSQXXXXXXXXXXXXXXXIFYLNYSKRKK- 2578
            LR PG R RRKCKKLGF IQSPR L RAS  S+               + Y  +++RKK 
Sbjct: 86   LRFPGARSRRKCKKLGFLIQSPRLLPRASLYSKPFLVIVAIATFSALTVVYSVHTRRKKD 145

Query: 2577 VREMSGPSI------LALSERIRCIMNQGNVDQTSVTEDLEWRMSVTESRNLMKGR-ETG 2419
             +E SG         LALS++ R   NQ   +Q    E +       E + + +   E G
Sbjct: 146  AQESSGTQDPDEFQNLALSKQSRDFTNQSVDNQILDLEKISDGTPAEELKAIFEETSEKG 205

Query: 2418 HASENQLVQLQE--ESVLMHEENLITNPLESHGFDINAYNATDSLSSRDSEVMGPSFPPS 2245
            H +  + VQL +  ++ LM EE+  T   E+     +  +   S+ ++++E M P+    
Sbjct: 206  HNNLEKEVQLSQFKKTALMFEESPFT---EASELSYSVCSTKSSILTKETESMDPTLSSP 262

Query: 2244 VLSESGTLQSVNFATEMPELEFEVCGQETELRSNMHKLMAREKLTVASAPMDTALKEVNE 2065
            VL ES + + V FA +MPEL  +   +E    S +  L+   K + +   +     EV++
Sbjct: 263  VLGESASGEKVRFAKDMPELVLKGYQEEAVPWSELSGLLVDPKSS-SVIHLKHVPAEVSQ 321

Query: 2064 HNKSNPELGKESETISCVSN--FKDSVREELYMFYEANRSALKCLANLNGSNTLSSHASV 1891
             ++   EL  E E      N  F+ S REE++ FYE N+S ++ ++N +   T+  H S+
Sbjct: 322  EHQFKNELDDEGEVQVSTYNGFFRPSFREEIHTFYEENQSGVRSISNFSSLKTVPPHISL 381

Query: 1890 RDSKTFS-LIRCSTTKGVESLAKEFLYTAENFKGKTPLGLYKEGSPHERKDLGKSRGFSR 1714
              +  FS L+R +   G E +++    T +  + K PL  YKEGS H RKD    +GF R
Sbjct: 382  NSNSNFSSLLRTNMLSGAE-VSEGLHNTTDYHERKMPLSCYKEGSCHRRKDFRIGKGFPR 440

Query: 1713 DKGNRILPQNGHRNFPHSPHPNGKDVDDTHNLAHKSSAYNRFLRNGRLIDCVELLEDMER 1534
            D G ++ PQNG RN  H P PNG  V D ++++    AYNR L +GR+ DCVELLED+ER
Sbjct: 441  DTGKKLTPQNGDRNL-HHPQPNGLHVSDRNDISGSIDAYNRLLSDGRVTDCVELLEDLER 499

Query: 1533 NGLLDMDKVYHAGFFKICKNQKAVKEAFRFIKLIPNPTLSTFNMLMSVCAISQDSEGAFQ 1354
             GLLDM+KVYHA FF  CK+QKAV EAFRFIKLI NPT+STFNML+SVCA  QDS+GAFQ
Sbjct: 500  KGLLDMNKVYHAKFFNTCKSQKAVNEAFRFIKLISNPTMSTFNMLLSVCASCQDSDGAFQ 559

Query: 1353 VLHLVQEAGLKADCKLYTTLISTCAKTGKVDTMFKVFHEMVNAEVEPNVHTYGALIDGCA 1174
            VL  V+EAGLKADCKLYTTLISTCAK+GKVD MF+VFHEMVNA VEPNVHTYGALIDGCA
Sbjct: 560  VLQFVKEAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCA 619

Query: 1173 KAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPD 994
            +AGQVAKAFGAYGIMRSK VKPDRVVFNALITACGQSGAVDRAFDVLAEMR E QPIDPD
Sbjct: 620  RAGQVAKAFGAYGIMRSKKVKPDRVVFNALITACGQSGAVDRAFDVLAEMRTENQPIDPD 679

Query: 993  HVTVGALIKACANAGQVERAREVYNMIHEYNIKGTPEVYTIAVNSCSRTGDWEFACHVYS 814
            HVTVGALIK C  AGQV+RAREVY MIHEYNIKGTP+VYTIAVNSCS+TGD +FA ++YS
Sbjct: 680  HVTVGALIKTCTQAGQVDRAREVYMMIHEYNIKGTPDVYTIAVNSCSQTGDLDFALNIYS 739

Query: 813  DMTRKGVAPDEMFFSALIDVAGHARKLDNAFDVLQKARDQGVHIGIISYSSLMGACSNAK 634
            DM R GV PDEMF SALIDVAGHA KLD AF +++ A+ QG+ +G +SYSSLMGACSNAK
Sbjct: 740  DMRRNGVVPDEMFLSALIDVAGHAGKLDVAFQIIEDAKKQGMQLGNVSYSSLMGACSNAK 799

Query: 633  NWQKAVELYEDIKSIKLKPTVSTMNALITSLCDGEQLQKAVDVLSEMKRVGLCPNTITYS 454
            NWQKA ELYE+I +IKL PTVS MNALITSLC+G QLQKAV VL EMK +G+CP  ITYS
Sbjct: 800  NWQKAQELYENIMAIKLHPTVSMMNALITSLCEGNQLQKAVKVLDEMKEIGICPENITYS 859

Query: 453  ILFVASEKKDDLEVGMSLFSQAKRDGVAPNLVMCRCLIAMCLRRFEKACALGEPVLSFNS 274
            IL VA EKKD+LE+G +L S+AK++G+ PNL+MCRCL  MCLRRFEK+ ++GEPVLSF+S
Sbjct: 860  ILLVACEKKDELELGFTLLSEAKKEGIVPNLIMCRCLTGMCLRRFEKSSSMGEPVLSFSS 919

Query: 273  GHPQIDSKWTSLALMVYREAIVAGVVPTMEECSQVLGCLKLPYDASLRNRLTENLQVSFV 94
            G PQ+++KWTSLALMVYRE IVAGVVPTME  SQVLGCL+LP D SLR RL ENL V+  
Sbjct: 920  GKPQVNNKWTSLALMVYRETIVAGVVPTMEVFSQVLGCLQLPRDTSLRERLVENLGVNTS 979

Query: 93   TSRSSNLFSLVDGFGEYDPR 34
            +S+ S+++SL+DGFGEYD R
Sbjct: 980  SSKHSSIYSLIDGFGEYDSR 999


>ref|XP_007041957.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
            cacao] gi|508705892|gb|EOX97788.1| Pentatricopeptide
            repeat-containing protein, putative [Theobroma cacao]
          Length = 1110

 Score =  977 bits (2525), Expect = 0.0
 Identities = 530/922 (57%), Positives = 652/922 (70%), Gaps = 15/922 (1%)
 Frame = -1

Query: 2754 LRPPG--VRYRRKCKKLGF-HIQSPRFLFRASFNSQXXXXXXXXXXXXXXXIFYLNYSKR 2584
            LRPPG     R+K K LGF  + SPRF+ RAS +S                +   N   R
Sbjct: 43   LRPPGGASSLRKKNKTLGFLRLHSPRFIVRASIDSNLVLVVIGVTALSALSLACYNRFFR 102

Query: 2583 K--KVREMSGPSILALSERIRCIMNQGNVDQTSVTEDLEWRMSVTESRNLMKGR------ 2428
            K    + +SG S  AL ++    + +    QT+ ++ L+  +   +  N  KG+      
Sbjct: 103  KIGSSKTVSGSSHSALPQQR---LGKDGAVQTAESQVLD--IGDLKKENFAKGKDDLKEE 157

Query: 2427 --ETGHASENQLVQLQ-EESVLMHEENLITNPLESHGFDINAYNATDSLSSRDSEVMGPS 2257
              E  +ASE++   LQ +E+ + ++++L+    +S G D  A  A     S +S      
Sbjct: 158  IKEATYASESKEALLQFQETTVANDDSLLHKTSDSSGADCLAVTANGFDVSEESGATDLP 217

Query: 2256 FPPSVLSESGTLQSVNFATEMPELEFEVCGQETELRSNMHKLMAREKLTVASAPMDTALK 2077
             PP+VL ESG ++ + FA EM EL  E   +  E  +++ +L    + + +S  +  A  
Sbjct: 218  LPPTVLLESGAVEPLMFAAEMSELHLEEVERVNEFEADLPRLAVEPESSASSVLVKDAHV 277

Query: 2076 EVNEHNKSNPELGKESETISCVSNFKDSVREELYMFYEANRSALKCLANLNGSNTLSSHA 1897
             V E            E       FK+SVREEL+ FYEA++   K   NLNG    SS  
Sbjct: 278  LVGE-----------GEVTRHYDIFKESVREELHTFYEADQLVAKSSTNLNGLKPASSRV 326

Query: 1896 SVRDSKTFS-LIRCSTTKGVESLAKEFLYTAENFKGKTPLGLYKEGSPHERKDLGKSRGF 1720
               +S +FS L++ S  K  +  +K  L TA+  +GK         S H+R+D G+ R  
Sbjct: 327  FSPNSNSFSSLMQNSELKRAQLSSKNCLQTADMAEGKVAQACSNRVSSHKRQDFGRGREI 386

Query: 1719 SRDKGNRILPQNGHRNFPHSPHPNGKDVDDTHNLAHKSSAYNRFLRNGRLIDCVELLEDM 1540
             RDKG R   Q  +   P  P PNG   D+ H       +YNR LR+GRL DCV+LLEDM
Sbjct: 387  PRDKGKRHSIQEKNTKLPKFPFPNGMLADNKHRPEDHFRSYNRLLRDGRLSDCVDLLEDM 446

Query: 1539 ERNGLLDMDKVYHAGFFKICKNQKAVKEAFRFIKLIPNPTLSTFNMLMSVCAISQDSEGA 1360
            E+ GLLDM+KVYHA FFKIC  QKAVKEAF F KLIPNPTLSTFNMLMSVCA SQDS+GA
Sbjct: 447  EQRGLLDMNKVYHAKFFKICNRQKAVKEAFCFTKLIPNPTLSTFNMLMSVCASSQDSDGA 506

Query: 1359 FQVLHLVQEAGLKADCKLYTTLISTCAKTGKVDTMFKVFHEMVNAEVEPNVHTYGALIDG 1180
            F+VL +VQEAG KADCKLYTTLISTCAK+GKVDTMF+VFHEMVN+ VEPNV+TYGALIDG
Sbjct: 507  FEVLRIVQEAGFKADCKLYTTLISTCAKSGKVDTMFEVFHEMVNSGVEPNVNTYGALIDG 566

Query: 1179 CAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPID 1000
            CA+AGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM AE QPID
Sbjct: 567  CARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMMAETQPID 626

Query: 999  PDHVTVGALIKACANAGQVERAREVYNMIHEYNIKGTPEVYTIAVNSCSRTGDWEFACHV 820
            PDHVTVGALIKAC+NA QV+RAREVY MIHE++IKGTPEVYTIAVN CS+TGDWEFAC V
Sbjct: 627  PDHVTVGALIKACSNADQVDRAREVYKMIHEFSIKGTPEVYTIAVNCCSQTGDWEFACSV 686

Query: 819  YSDMTRKGVAPDEMFFSALIDVAGHARKLDNAFDVLQKARDQGVHIGIISYSSLMGACSN 640
            YSDM  KGVAPDE+F SALIDVAGHA KLD AF++L++A++QG+++GI+SYSSLMGACSN
Sbjct: 687  YSDMKGKGVAPDEVFISALIDVAGHAGKLDAAFEILEEAKNQGINVGIVSYSSLMGACSN 746

Query: 639  AKNWQKAVELYEDIKSIKLKPTVSTMNALITSLCDGEQLQKAVDVLSEMKRVGLCPNTIT 460
            A+NWQKA+ELYE+IK++KL  TVST+NALITSLC+ +QL KA+++LSEM+ +GLCPNT+T
Sbjct: 747  ARNWQKALELYENIKAVKLNLTVSTVNALITSLCEADQLPKAMEILSEMEELGLCPNTVT 806

Query: 459  YSILFVASEKKDDLEVGMSLFSQAKRDGVAPNLVMCRCLIAMCLRRFEKACALGEPVLSF 280
            YSIL VASE+KDDLEVG+ L SQA++DGVAPNL+M RC+I MCLRRFEKAC +GEPVLSF
Sbjct: 807  YSILLVASERKDDLEVGLMLLSQARKDGVAPNLIMARCIIGMCLRRFEKACKVGEPVLSF 866

Query: 279  NSGHPQIDSKWTSLALMVYREAIVAGVVPTMEECSQVLGCLKLPYDASLRNRLTENLQVS 100
            NSG P I++KWTS+AL VYRE IVAG  PTM+  SQ+LGCL+LP D SL++RL ENL VS
Sbjct: 867  NSGQPHIENKWTSVALAVYRETIVAGTAPTMDVISQILGCLQLPRDDSLKSRLVENLDVS 926

Query: 99   FVTSRSSNLFSLVDGFGEYDPR 34
               +R S+L SL+DGFGEYDPR
Sbjct: 927  ADATRCSSLSSLIDGFGEYDPR 948


>ref|XP_010088683.1| hypothetical protein L484_003235 [Morus notabilis]
            gi|587846355|gb|EXB36850.1| hypothetical protein
            L484_003235 [Morus notabilis]
          Length = 1125

 Score =  969 bits (2504), Expect = 0.0
 Identities = 524/922 (56%), Positives = 657/922 (71%), Gaps = 15/922 (1%)
 Frame = -1

Query: 2754 LRPPG-VRYRRKCKKLGFHIQSPRFLFRASFNSQXXXXXXXXXXXXXXXIFYLNYSKRKK 2578
            LRPPG +R R + +K   H +S RFLFRAS  S                + Y N+ K KK
Sbjct: 47   LRPPGSLRSRGRQRKPWSHSRSSRFLFRASLGSHPVLVVVAVVTVSAASVVYWNFFKSKK 106

Query: 2577 -VREMSGPSILALSERIRCIMNQGNVDQTSVTEDLEWRMSVTESRNLMKGRETGHASENQ 2401
              RE+ GP+  AL +    +MN  +V Q+ + +  + R    +     + RE  HAS  +
Sbjct: 107  NAREVPGPANFALPQMGGNVMN--HVIQSQMLDFGDVREMEVQQLLKDENRENSHASVEK 164

Query: 2400 LVQLQ-EESVLMHEENLITNPLESHGFDINAYNATDSLSSRDSEVMGPSFPPSVLSESGT 2224
               LQ   + +M++E L+T+ L+S G  +    A++S    +S V+  S  P +LSES  
Sbjct: 165  QAPLQFHNATVMNQETLVTSALQSSGSGVLVSGASNSTFLNESSVLDQSLSP-LLSESAI 223

Query: 2223 LQSVNFATEMPELEFEVCGQETELRSNMH---------KLMAREKLTVASAPMDTALKEV 2071
            L+ +N    +   + +   +E E   ++           +  +E++         ++ E+
Sbjct: 224  LEPLNLPESLNGFQLDKLREEIESSESLFGSASVQDNGSVHLQEEIVSKFKVNGHSVAEL 283

Query: 2070 NEHNKSNPELGKESETISCVSNFKDSVREELYMFYEANRSALKCLANLNGSNTLSSHASV 1891
            +E       LG+E E  S      +SVR+EL+MFY+ N+S  K +  +NG N+LS +AS 
Sbjct: 284  HEDETDKRRLGEEGEMTSYNFLLGESVRKELHMFYDENKSDEKGIGKINGHNSLSPNASA 343

Query: 1890 RDSKTFSL-IRCSTTKGVESLAKEFLYTAENFKGKTPLGLYKEGSPHERKDLGKSRGFSR 1714
             +SKT S  +R +  KG E+ A      A+N + K P   +KEG+    K+ G+ RG+SR
Sbjct: 344  PNSKTVSASLRDTIVKGGEATALFPPLKADNHESKIPFSSHKEGTLRSGKNSGQGRGYSR 403

Query: 1713 D--KGNRILPQNGHRNFPHSPHPNGKDVDDTHNLAHKSSAYNRFLRNGRLIDCVELLEDM 1540
            D  KGN  L QN H+        NG DV+  H+ + + S YNR +++GRL D VELLEDM
Sbjct: 404  DLIKGN--LAQNNHKAPAKLTRLNGLDVEQKHHPSEQISTYNRLVKDGRLSDAVELLEDM 461

Query: 1539 ERNGLLDMDKVYHAGFFKICKNQKAVKEAFRFIKLIPNPTLSTFNMLMSVCAISQDSEGA 1360
            ER GLLDM+KVYHA FFKICK QKAV EAFR++ LIP PTLST+NMLMSVC  SQD EGA
Sbjct: 462  ERRGLLDMNKVYHAKFFKICKFQKAVNEAFRYVNLIPYPTLSTYNMLMSVCTSSQDPEGA 521

Query: 1359 FQVLHLVQEAGLKADCKLYTTLISTCAKTGKVDTMFKVFHEMVNAEVEPNVHTYGALIDG 1180
            F+V+ LVQEAGLKADCKLYTTLISTCAK+GKVD+MF+VFH+MVN  VEPNVHTYG+LIDG
Sbjct: 522  FKVMQLVQEAGLKADCKLYTTLISTCAKSGKVDSMFEVFHKMVNDGVEPNVHTYGSLIDG 581

Query: 1179 CAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPID 1000
            CA+AGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM AE + ID
Sbjct: 582  CARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMTAEPELID 641

Query: 999  PDHVTVGALIKACANAGQVERAREVYNMIHEYNIKGTPEVYTIAVNSCSRTGDWEFACHV 820
            PDH+TVGAL+KACAN+GQV+RAREVY M+H+YN+KGTPEVYTIAVN+ S  GDWEFA +V
Sbjct: 642  PDHITVGALMKACANSGQVDRAREVYKMVHQYNLKGTPEVYTIAVNTSSHMGDWEFARNV 701

Query: 819  YSDMTRKGVAPDEMFFSALIDVAGHARKLDNAFDVLQKARDQGVHIGIISYSSLMGACSN 640
            Y DMTRKGV PDEMF SALID AGHA KLD AF++L +A+++GV  G +SYSSLMGACSN
Sbjct: 702  YDDMTRKGVLPDEMFLSALIDAAGHAGKLDAAFEILSEAKNRGVKFGTVSYSSLMGACSN 761

Query: 639  AKNWQKAVELYEDIKSIKLKPTVSTMNALITSLCDGEQLQKAVDVLSEMKRVGLCPNTIT 460
            AKNWQKA+ELYED+KS K + TVST+NALIT+LCDG+QLQKA++VLSEMK +GL PN+IT
Sbjct: 762  AKNWQKALELYEDLKSTKSEQTVSTVNALITALCDGDQLQKAMEVLSEMKALGLSPNSIT 821

Query: 459  YSILFVASEKKDDLEVGMSLFSQAKRDGVAPNLVMCRCLIAMCLRRFEKACALGEPVLSF 280
            YSIL VASEKKDDLEVG+ LFSQAK+DG++PNL+M RC++  CLRR+E A  LGEPVLSF
Sbjct: 822  YSILLVASEKKDDLEVGLVLFSQAKKDGISPNLLMSRCILGTCLRRYENASTLGEPVLSF 881

Query: 279  NSGHPQIDSKWTSLALMVYREAIVAGVVPTMEECSQVLGCLKLPYDASLRNRLTENLQVS 100
            + G PQ+ +KWTS ALMVYR+ I AGV PT++  SQVLGCL+LP+D SL+NRL ENL VS
Sbjct: 882  DPGRPQVVNKWTSSALMVYRDTIAAGVTPTIDVLSQVLGCLQLPHDPSLKNRLIENLAVS 941

Query: 99   FVTSRSSNLFSLVDGFGEYDPR 34
              TSR SNL SL+DGFGEYDPR
Sbjct: 942  VDTSRPSNLSSLIDGFGEYDPR 963


>ref|XP_010255161.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X2 [Nelumbo nucifera]
          Length = 1133

 Score =  968 bits (2502), Expect = 0.0
 Identities = 528/919 (57%), Positives = 643/919 (69%), Gaps = 12/919 (1%)
 Frame = -1

Query: 2754 LRPPGVRYRRKCKKLGFHIQSPRFLFRASFNSQXXXXXXXXXXXXXXXIFYLNYSKRKK- 2578
            LR PG R RRKCKKLGF IQSPR L RAS  S+               + Y  +++RKK 
Sbjct: 86   LRFPGARSRRKCKKLGFLIQSPRLLPRASLYSKPFLVIVAIATFSALTVVYSVHTRRKKD 145

Query: 2577 VREMSGPSI------LALSERIRCIMNQGNVDQTSVTEDLEWRMSVTESRNLMKGR-ETG 2419
             +E SG         LALS++ R   NQ   +Q    E +       E + + +   E G
Sbjct: 146  AQESSGTQDPDEFQNLALSKQSRDFTNQSVDNQILDLEKISDGTPAEELKAIFEETSEKG 205

Query: 2418 HASENQLVQLQE--ESVLMHEENLITNPLESHGFDINAYNATDSLSSRDSEVMGPSFPPS 2245
            H +  + VQL +  ++ LM EE+  T   E+     +  +   S+ ++++E M P+    
Sbjct: 206  HNNLEKEVQLSQFKKTALMFEESPFT---EASELSYSVCSTKSSILTKETESMDPTLSSP 262

Query: 2244 VLSESGTLQSVNFATEMPELEFEVCGQETELRSNMHKLMAREKLTVASAPMDTALKEVNE 2065
            VL ES + + V FA +MPEL  +   +E    S +  L+   K + +   +     EV++
Sbjct: 263  VLGESASGEKVRFAKDMPELVLKGYQEEAVPWSELSGLLVDPKSS-SVIHLKHVPAEVSQ 321

Query: 2064 HNKSNPELGKESETISCVSN--FKDSVREELYMFYEANRSALKCLANLNGSNTLSSHASV 1891
             ++   EL  E E      N  F+ S REE++ FYE N+S ++       +N LS     
Sbjct: 322  EHQFKNELDDEGEVQVSTYNGFFRPSFREEIHTFYEENQSGVR-------TNMLSG---- 370

Query: 1890 RDSKTFSLIRCSTTKGVESLAKEFLYTAENFKGKTPLGLYKEGSPHERKDLGKSRGFSRD 1711
                         ++G+ +       T +  + K PL  YKEGS H RKD    +GF RD
Sbjct: 371  ----------AEVSEGLHN-------TTDYHERKMPLSCYKEGSCHRRKDFRIGKGFPRD 413

Query: 1710 KGNRILPQNGHRNFPHSPHPNGKDVDDTHNLAHKSSAYNRFLRNGRLIDCVELLEDMERN 1531
             G ++ PQNG RN  H P PNG  V D ++++    AYNR L +GR+ DCVELLED+ER 
Sbjct: 414  TGKKLTPQNGDRNL-HHPQPNGLHVSDRNDISGSIDAYNRLLSDGRVTDCVELLEDLERK 472

Query: 1530 GLLDMDKVYHAGFFKICKNQKAVKEAFRFIKLIPNPTLSTFNMLMSVCAISQDSEGAFQV 1351
            GLLDM+KVYHA FF  CK+QKAV EAFRFIKLI NPT+STFNML+SVCA  QDS+GAFQV
Sbjct: 473  GLLDMNKVYHAKFFNTCKSQKAVNEAFRFIKLISNPTMSTFNMLLSVCASCQDSDGAFQV 532

Query: 1350 LHLVQEAGLKADCKLYTTLISTCAKTGKVDTMFKVFHEMVNAEVEPNVHTYGALIDGCAK 1171
            L  V+EAGLKADCKLYTTLISTCAK+GKVD MF+VFHEMVNA VEPNVHTYGALIDGCA+
Sbjct: 533  LQFVKEAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCAR 592

Query: 1170 AGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDH 991
            AGQVAKAFGAYGIMRSK VKPDRVVFNALITACGQSGAVDRAFDVLAEMR E QPIDPDH
Sbjct: 593  AGQVAKAFGAYGIMRSKKVKPDRVVFNALITACGQSGAVDRAFDVLAEMRTENQPIDPDH 652

Query: 990  VTVGALIKACANAGQVERAREVYNMIHEYNIKGTPEVYTIAVNSCSRTGDWEFACHVYSD 811
            VTVGALIK C  AGQV+RAREVY MIHEYNIKGTP+VYTIAVNSCS+TGD +FA ++YSD
Sbjct: 653  VTVGALIKTCTQAGQVDRAREVYMMIHEYNIKGTPDVYTIAVNSCSQTGDLDFALNIYSD 712

Query: 810  MTRKGVAPDEMFFSALIDVAGHARKLDNAFDVLQKARDQGVHIGIISYSSLMGACSNAKN 631
            M R GV PDEMF SALIDVAGHA KLD AF +++ A+ QG+ +G +SYSSLMGACSNAKN
Sbjct: 713  MRRNGVVPDEMFLSALIDVAGHAGKLDVAFQIIEDAKKQGMQLGNVSYSSLMGACSNAKN 772

Query: 630  WQKAVELYEDIKSIKLKPTVSTMNALITSLCDGEQLQKAVDVLSEMKRVGLCPNTITYSI 451
            WQKA ELYE+I +IKL PTVS MNALITSLC+G QLQKAV VL EMK +G+CP  ITYSI
Sbjct: 773  WQKAQELYENIMAIKLHPTVSMMNALITSLCEGNQLQKAVKVLDEMKEIGICPENITYSI 832

Query: 450  LFVASEKKDDLEVGMSLFSQAKRDGVAPNLVMCRCLIAMCLRRFEKACALGEPVLSFNSG 271
            L VA EKKD+LE+G +L S+AK++G+ PNL+MCRCL  MCLRRFEK+ ++GEPVLSF+SG
Sbjct: 833  LLVACEKKDELELGFTLLSEAKKEGIVPNLIMCRCLTGMCLRRFEKSSSMGEPVLSFSSG 892

Query: 270  HPQIDSKWTSLALMVYREAIVAGVVPTMEECSQVLGCLKLPYDASLRNRLTENLQVSFVT 91
             PQ+++KWTSLALMVYRE IVAGVVPTME  SQVLGCL+LP D SLR RL ENL V+  +
Sbjct: 893  KPQVNNKWTSLALMVYRETIVAGVVPTMEVFSQVLGCLQLPRDTSLRERLVENLGVNTSS 952

Query: 90   SRSSNLFSLVDGFGEYDPR 34
            S+ S+++SL+DGFGEYD R
Sbjct: 953  SKHSSIYSLIDGFGEYDSR 971


>emb|CDO96965.1| unnamed protein product [Coffea canephora]
          Length = 1101

 Score =  950 bits (2456), Expect = 0.0
 Identities = 527/921 (57%), Positives = 638/921 (69%), Gaps = 14/921 (1%)
 Frame = -1

Query: 2754 LRPPGVRYRRKCKKLGF--HIQSPRFLFRASFNSQXXXXXXXXXXXXXXXIFYL--NYSK 2587
            LRPPG+R+RR+C+KLGF  H  S  FL RAS +S                   +  +YSK
Sbjct: 38   LRPPGLRFRRQCRKLGFRFHFHSRNFLLRASLDSHSVVLVVAVTAVAVSAFILVFHSYSK 97

Query: 2586 RK---KVREMSGPSILALSERIRCIMNQGNVDQ-----TSVTEDLEWRMSVTESRNLMKG 2431
            R+   +  +M G     L + I+  M+  ++++      ++  D +  + +  S N    
Sbjct: 98   RRNNAQHNQMPGRLTHPLFQHIKSRMDSLSMEEFILLNRNIPIDKKVDLPIEMSNN---- 153

Query: 2430 RETGHASENQLVQLQEESVLMHEENLITNPLESHGFDINAYNATDSLSSRDSEVMGPSFP 2251
              T H  +       ++  +M+   + TN  E    ++ A    DSL +R+SE +  S  
Sbjct: 154  --TFHHEDVVAEMHLDDINVMNGATIATNTSELSICEMTASVVNDSLHTRESEGLSVSSL 211

Query: 2250 PSVLSESGTLQSVNFATEMPELEFEVCGQETELRSNMHKLMAREKLTVASAPMDTALKEV 2071
            P + SE   +       E  E++ E C  E+   S   KL+  +K  +AS         V
Sbjct: 212  PLLPSEP-EVAGPTLNIEPSEMQLERCEHESGSDSKETKLLLVKKPHIASFFPVNVQSRV 270

Query: 2070 NEHNKSNPELGKESETISCVSNFKDSVREELYMFYEANRSALKCLANLNGSNTLSSHASV 1891
             E  + + E+  E + I        S RE+LY FYEA       +A LNG   LSS  S+
Sbjct: 271  TEFGRLDHEILTEGQQIKPDL----SHREDLYTFYEAP------MAKLNGLGALSSGISL 320

Query: 1890 RDSKTFSLIRCSTTKGVESLAKEFLYTAENFKG--KTPLGLYKEGSPHERKDLGKSRGFS 1717
              +   SL + S   G + L ++  + AE  +G  K  +  Y  GS H ++D+GK +   
Sbjct: 321  HKNGNSSLFKASVVDGEQFLRQQLSHRAEETEGHEKRHVSYYNNGSSHWKEDMGKRKESP 380

Query: 1716 RDKGNRILPQNGHRNFPHSPHPNGKDVDDTHNLAHKSSAYNRFLRNGRLIDCVELLEDME 1537
              K N  L +N  ++   + +  GK + D +        Y++ LR+GRL DC+E+LEDME
Sbjct: 381  AYKDNAKLHENRSKSLSPTHNLKGKHMHDRNRSPQLFGGYSKLLRDGRLNDCIEMLEDME 440

Query: 1536 RNGLLDMDKVYHAGFFKICKNQKAVKEAFRFIKLIPNPTLSTFNMLMSVCAISQDSEGAF 1357
              GLLDMDKVYHAGFFK CK QKAVKEAFRF KLIPNPTLSTFNMLMSVCA +QDSEGAF
Sbjct: 441  SKGLLDMDKVYHAGFFKACKTQKAVKEAFRFTKLIPNPTLSTFNMLMSVCARAQDSEGAF 500

Query: 1356 QVLHLVQEAGLKADCKLYTTLISTCAKTGKVDTMFKVFHEMVNAEVEPNVHTYGALIDGC 1177
            +VL LVQEA LKADCKLYTTLISTCA+ GKVDTMFKVFHEMVNA VEPNVHTYGALIDGC
Sbjct: 501  EVLQLVQEARLKADCKLYTTLISTCARAGKVDTMFKVFHEMVNAGVEPNVHTYGALIDGC 560

Query: 1176 AKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDP 997
            AKAGQVAKAFGAYGIM+SKNVKPDRVVFNALITACG+SGAVDRAFDVLAEMR+E +PIDP
Sbjct: 561  AKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMRSEIRPIDP 620

Query: 996  DHVTVGALIKACANAGQVERAREVYNMIHEYNIKGTPEVYTIAVNSCSRTGDWEFACHVY 817
            DH+TVGALIKAC  +GQ++RAREVY M+ EYNIKGTPEVYTIAVN  S+  DWEFAC VY
Sbjct: 621  DHITVGALIKACIRSGQIDRAREVYKMLDEYNIKGTPEVYTIAVN--SQNADWEFACAVY 678

Query: 816  SDMTRKGVAPDEMFFSALIDVAGHARKLDNAFDVLQKARDQGVHIGIISYSSLMGACSNA 637
            SDMT +GVAPDEMF SALIDVAGHA  LD AF++L+ AR  G+  G ISYSSLMGACSNA
Sbjct: 679  SDMTIRGVAPDEMFISALIDVAGHAGNLDAAFEILKVARANGIPSGSISYSSLMGACSNA 738

Query: 636  KNWQKAVELYEDIKSIKLKPTVSTMNALITSLCDGEQLQKAVDVLSEMKRVGLCPNTITY 457
            K+WQKA++LYE+IK I LKPTVS MNAL+T+LC+ +QLQKA +VL EMK  GLCPNTITY
Sbjct: 739  KDWQKALQLYEEIKDINLKPTVSMMNALVTALCEADQLQKATEVLFEMKMRGLCPNTITY 798

Query: 456  SILFVASEKKDDLEVGMSLFSQAKRDGVAPNLVMCRCLIAMCLRRFEKACALGEPVLSFN 277
            SIL VASEKKDDLEVG+ LFSQAK+DGVAPNLVMCRCLI MCLRRF++ACALGEPV S  
Sbjct: 799  SILLVASEKKDDLEVGLMLFSQAKKDGVAPNLVMCRCLIGMCLRRFQQACALGEPVFSLK 858

Query: 276  SGHPQIDSKWTSLALMVYREAIVAGVVPTMEECSQVLGCLKLPYDASLRNRLTENLQVSF 97
            SG+ Q+DSKWTSLALMVYREA+VAGV PT++E SQVLGCL+LP+D SLRNRL ENL VS 
Sbjct: 859  SGYLQLDSKWTSLALMVYREAVVAGVAPTVDELSQVLGCLQLPHDVSLRNRLIENLGVST 918

Query: 96   VTSRSSNLFSLVDGFGEYDPR 34
             TS+ S LFSLVDGFGEYDPR
Sbjct: 919  DTSKGSKLFSLVDGFGEYDPR 939


>ref|XP_006494588.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 923

 Score =  950 bits (2455), Expect = 0.0
 Identities = 514/914 (56%), Positives = 637/914 (69%), Gaps = 7/914 (0%)
 Frame = -1

Query: 2754 LRPPGVRYRRKCKKLGF--HIQSPRFLFRASF----NSQXXXXXXXXXXXXXXXIFYLNY 2593
            LRP     RRKC  LG   H +SP+FL +AS     NS                + YLN+
Sbjct: 44   LRPQTPPPRRKCNSLGLLLHTRSPQFLVKASLRSPPNSVLIAVIVALATFAAFSLAYLNH 103

Query: 2592 SKRKKVREMSGPSILALSERIRCIMNQGNVDQTSVTEDLEWRMSVTESRNLMKGRETGHA 2413
              + + +  S         +IR     G+     + E+   R+S  E+ +LM   E G +
Sbjct: 104  FLQNRRKNSSKQ---VSDSKIRGTRQLGSDAVDDIIENQIVRISSGENESLMM--EIGGS 158

Query: 2412 SENQLVQLQEESVLMHEENLITNPLESHGFDINAYNATDSLSSRDSEVMGPSFPPSVLSE 2233
            ++    + ++E+  + +   +T    S G               DS V     PP +LS+
Sbjct: 159  NQVSEERTEQETTFVPDCTYLTETSVSIG--------------TDSFVSPQECPPFMLSD 204

Query: 2232 SGTLQSVNFATEMPELEFEVCGQETELRSNMHKLMAREKLTVASAPMDTALKEVNEHNKS 2053
            SG +Q  +FATEM EL+                 + +EK  + S             N +
Sbjct: 205  SGGVQPHSFATEMSELQ-----------------LGKEKKDIESCESSVL------ENDA 241

Query: 2052 NPELGKESETISCVSNFKDSVREELYMFYEANRSALKCLANLNGSNTLSSHASVRDSKTF 1873
            + E+   + +   ++   +SVREE +    A++S LK  ANL     +SSHAS  +  + 
Sbjct: 242  HAEVSVPTVSYGVLT---ESVREEQFACGRASQSVLKSPANLEFVKAISSHASPLNGYSL 298

Query: 1872 SLIRCSTT-KGVESLAKEFLYTAENFKGKTPLGLYKEGSPHERKDLGKSRGFSRDKGNRI 1696
            S ++  T  KG E   +E L TAE+ +GK  L  ++EG  H+ K   + R F R+     
Sbjct: 299  SSLKRDTEPKGPELSLQEALQTAEHVEGKIRLACHREGPSHKIKARRRIRNFPRNNERIN 358

Query: 1695 LPQNGHRNFPHSPHPNGKDVDDTHNLAHKSSAYNRFLRNGRLIDCVELLEDMERNGLLDM 1516
            L Q+  +N    P+PNGK  +  H+++ +  +YNR +R GR+ DC++LLEDMER GLLDM
Sbjct: 359  LMQDVGKNMLQFPYPNGKHANYAHDVSEQLHSYNRLIRQGRISDCIDLLEDMERKGLLDM 418

Query: 1515 DKVYHAGFFKICKNQKAVKEAFRFIKLIPNPTLSTFNMLMSVCAISQDSEGAFQVLHLVQ 1336
            DKVYHA FF +CK+QKA+KEAFRF KL+PNPTLSTFNMLMSVCA S+DSEGAFQVL LVQ
Sbjct: 419  DKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQ 478

Query: 1335 EAGLKADCKLYTTLISTCAKTGKVDTMFKVFHEMVNAEVEPNVHTYGALIDGCAKAGQVA 1156
            EAGLKADCKLYTTLI+TCAK+GKVD MF+VFHEMVNA +EPNVHTYGALIDGCAKAGQVA
Sbjct: 479  EAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVA 538

Query: 1155 KAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHVTVGA 976
            KAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM AE  P+DPDH+T+GA
Sbjct: 539  KAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGA 598

Query: 975  LIKACANAGQVERAREVYNMIHEYNIKGTPEVYTIAVNSCSRTGDWEFACHVYSDMTRKG 796
            L+KACANAGQV+RAREVY MIH+YNIKGTPEVYTIA+N CS+TGDWEFAC VY DMT+KG
Sbjct: 599  LMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKG 658

Query: 795  VAPDEMFFSALIDVAGHARKLDNAFDVLQKARDQGVHIGIISYSSLMGACSNAKNWQKAV 616
            V PDE+F SALID AGHA K++ AF++LQ+A++QG+ +GIISYSSLMGACSNAKNWQKA+
Sbjct: 659  VIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKAL 718

Query: 615  ELYEDIKSIKLKPTVSTMNALITSLCDGEQLQKAVDVLSEMKRVGLCPNTITYSILFVAS 436
            ELYE +KSIKLKPTVSTMNALIT+LCDG++L K ++VLS+MK +GLCPNTITYSIL VA 
Sbjct: 719  ELYEHMKSIKLKPTVSTMNALITALCDGDRLPKTMEVLSDMKSLGLCPNTITYSILLVAC 778

Query: 435  EKKDDLEVGMSLFSQAKRDGVAPNLVMCRCLIAMCLRRFEKACALGEPVLSFNSGHPQID 256
            E+KDD+EVG+ L SQAK DGV PNLVM +C+I MC RR+EKA  L E VLSFNSG PQI+
Sbjct: 779  ERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLSFNSGRPQIE 838

Query: 255  SKWTSLALMVYREAIVAGVVPTMEECSQVLGCLKLPYDASLRNRLTENLQVSFVTSRSSN 76
            +KWTSL LMVYREAIVAG +PT+E  S+VLGCL+LPY+A +R RL ENL VS    + SN
Sbjct: 839  NKWTSLVLMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLGVSADALKRSN 898

Query: 75   LFSLVDGFGEYDPR 34
            L SL+DGFGEYDPR
Sbjct: 899  LCSLIDGFGEYDPR 912


>ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 1072

 Score =  950 bits (2455), Expect = 0.0
 Identities = 514/914 (56%), Positives = 637/914 (69%), Gaps = 7/914 (0%)
 Frame = -1

Query: 2754 LRPPGVRYRRKCKKLGF--HIQSPRFLFRASF----NSQXXXXXXXXXXXXXXXIFYLNY 2593
            LRP     RRKC  LG   H +SP+FL +AS     NS                + YLN+
Sbjct: 44   LRPQTPPPRRKCNSLGLLLHTRSPQFLVKASLRSPPNSVLIAVIVALATFAAFSLAYLNH 103

Query: 2592 SKRKKVREMSGPSILALSERIRCIMNQGNVDQTSVTEDLEWRMSVTESRNLMKGRETGHA 2413
              + + +  S         +IR     G+     + E+   R+S  E+ +LM   E G +
Sbjct: 104  FLQNRRKNSSKQ---VSDSKIRGTRQLGSDAVDDIIENQIVRISSGENESLMM--EIGGS 158

Query: 2412 SENQLVQLQEESVLMHEENLITNPLESHGFDINAYNATDSLSSRDSEVMGPSFPPSVLSE 2233
            ++    + ++E+  + +   +T    S G               DS V     PP +LS+
Sbjct: 159  NQVSEERTEQETTFVPDCTYLTETSVSIG--------------TDSFVSPQECPPFMLSD 204

Query: 2232 SGTLQSVNFATEMPELEFEVCGQETELRSNMHKLMAREKLTVASAPMDTALKEVNEHNKS 2053
            SG +Q  +FATEM EL+                 + +EK  + S             N +
Sbjct: 205  SGGVQPHSFATEMSELQ-----------------LGKEKKDIESCESSVL------ENDA 241

Query: 2052 NPELGKESETISCVSNFKDSVREELYMFYEANRSALKCLANLNGSNTLSSHASVRDSKTF 1873
            + E+   + +   ++   +SVREE +    A++S LK  ANL     +SSHAS  +  + 
Sbjct: 242  HAEVSVPTVSYGVLT---ESVREEQFACGRASQSVLKSPANLEFVKAISSHASPLNGYSL 298

Query: 1872 SLIRCSTT-KGVESLAKEFLYTAENFKGKTPLGLYKEGSPHERKDLGKSRGFSRDKGNRI 1696
            S ++  T  KG E   +E L TAE+ +GK  L  ++EG  H+ K   + R F R+     
Sbjct: 299  SSLKRDTEPKGPELSLQEALQTAEHVEGKIRLACHREGPSHKIKARRRIRNFPRNNERIN 358

Query: 1695 LPQNGHRNFPHSPHPNGKDVDDTHNLAHKSSAYNRFLRNGRLIDCVELLEDMERNGLLDM 1516
            L Q+  +N    P+PNGK  +  H+++ +  +YNR +R GR+ DC++LLEDMER GLLDM
Sbjct: 359  LMQDVGKNMLQFPYPNGKHANYAHDVSEQLHSYNRLIRQGRISDCIDLLEDMERKGLLDM 418

Query: 1515 DKVYHAGFFKICKNQKAVKEAFRFIKLIPNPTLSTFNMLMSVCAISQDSEGAFQVLHLVQ 1336
            DKVYHA FF +CK+QKA+KEAFRF KL+PNPTLSTFNMLMSVCA S+DSEGAFQVL LVQ
Sbjct: 419  DKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQ 478

Query: 1335 EAGLKADCKLYTTLISTCAKTGKVDTMFKVFHEMVNAEVEPNVHTYGALIDGCAKAGQVA 1156
            EAGLKADCKLYTTLI+TCAK+GKVD MF+VFHEMVNA +EPNVHTYGALIDGCAKAGQVA
Sbjct: 479  EAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVA 538

Query: 1155 KAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHVTVGA 976
            KAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM AE  P+DPDH+T+GA
Sbjct: 539  KAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGA 598

Query: 975  LIKACANAGQVERAREVYNMIHEYNIKGTPEVYTIAVNSCSRTGDWEFACHVYSDMTRKG 796
            L+KACANAGQV+RAREVY MIH+YNIKGTPEVYTIA+N CS+TGDWEFAC VY DMT+KG
Sbjct: 599  LMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKG 658

Query: 795  VAPDEMFFSALIDVAGHARKLDNAFDVLQKARDQGVHIGIISYSSLMGACSNAKNWQKAV 616
            V PDE+F SALID AGHA K++ AF++LQ+A++QG+ +GIISYSSLMGACSNAKNWQKA+
Sbjct: 659  VIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKAL 718

Query: 615  ELYEDIKSIKLKPTVSTMNALITSLCDGEQLQKAVDVLSEMKRVGLCPNTITYSILFVAS 436
            ELYE +KSIKLKPTVSTMNALIT+LCDG++L K ++VLS+MK +GLCPNTITYSIL VA 
Sbjct: 719  ELYEHMKSIKLKPTVSTMNALITALCDGDRLPKTMEVLSDMKSLGLCPNTITYSILLVAC 778

Query: 435  EKKDDLEVGMSLFSQAKRDGVAPNLVMCRCLIAMCLRRFEKACALGEPVLSFNSGHPQID 256
            E+KDD+EVG+ L SQAK DGV PNLVM +C+I MC RR+EKA  L E VLSFNSG PQI+
Sbjct: 779  ERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLSFNSGRPQIE 838

Query: 255  SKWTSLALMVYREAIVAGVVPTMEECSQVLGCLKLPYDASLRNRLTENLQVSFVTSRSSN 76
            +KWTSL LMVYREAIVAG +PT+E  S+VLGCL+LPY+A +R RL ENL VS    + SN
Sbjct: 839  NKWTSLVLMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLGVSADALKRSN 898

Query: 75   LFSLVDGFGEYDPR 34
            L SL+DGFGEYDPR
Sbjct: 899  LCSLIDGFGEYDPR 912


>ref|XP_012084399.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic [Jatropha curcas]
            gi|643715661|gb|KDP27602.1| hypothetical protein
            JCGZ_19607 [Jatropha curcas]
          Length = 1112

 Score =  941 bits (2431), Expect = 0.0
 Identities = 528/925 (57%), Positives = 636/925 (68%), Gaps = 18/925 (1%)
 Frame = -1

Query: 2754 LRPPGVRYR-RKCKKLGFH-IQSPRFLFRASFNSQXXXXXXXXXXXXXXXIFYLNYS--- 2590
            LRPPG   R  KC+K+     QS   L  ASF S+                 YLN     
Sbjct: 41   LRPPGGSLRVGKCRKVKIRRSQSQSLLLNASFGSESVLVAVAVSTLSAISFAYLNQQITS 100

Query: 2589 ---KRKKVREMSGPSILALSERIRCIMNQGNVDQTSVTEDLEWRMSV--TESRNLM-KGR 2428
                RK  +E SG   L  S+  + I+N  +V QT   +      S+  TES NL+ K  
Sbjct: 101  NNGNRKDSKEASGSPGLGSSQLGKNIVN--HVIQTPSADVGNSLRSILATESENLVEKAI 158

Query: 2427 ETGHASENQLVQLQE-ESVLMHEENLITNPLESHGFDINAYNATDSLSSRDSEVMGPSFP 2251
            E  HA E +   +Q  E+ L    +++    E    D    N ++ +  ++SE    S  
Sbjct: 159  ENSHAIEGEETVVQVCENTLRSTSSILFETSEYDNADFPVSNVSNYVVPKESEATNVSVS 218

Query: 2250 P-SVLSESG-TLQSVNFATEMPELEFEVCGQET---ELRSNMHKLMAREKLTVASAPMDT 2086
              S + ES   L  V  A  M EL  E  G ET   E+ + +  LM +     AS P+  
Sbjct: 219  KESAIPESEKVLPLVLNARGMSELTLEKSGNETDVHEVDAELTHLMEQMSNNTASPPV-- 276

Query: 2085 ALKEVNEHNKSNPELGKESETISCVSNFKDSVREELYMFYEANRSALKCLANLNGSNTLS 1906
                       N E G++ +  S     K+S RE+LYMFY+ ++S +K   NLNGSN++S
Sbjct: 277  -----------NYEAGEKIDLSSYHGIIKESAREDLYMFYDKSQSVVKSPLNLNGSNSVS 325

Query: 1905 SHASVRDSKTFSLIRCS-TTKGVESLAKEFLYTAENFKGKTPLGLYKEGSPHERKDLGKS 1729
            SHAS     +FS  + +   K  +S A++    AE+   K  L  Y   S  + ++  + 
Sbjct: 326  SHASPSIGNSFSSFKVNGIVKEADSSAQQSPKIAESVDKKVRLAHYVRESSRKNENTRRR 385

Query: 1728 RGFSRDKGNRILPQNGHRNFPHSPHPNGKDVDDTHNLAHKSSAYNRFLRNGRLIDCVELL 1549
            RGF  +K      QN     P  P+PNG  V D  + + +  AYNR LR+GRL +CV LL
Sbjct: 386  RGFPTEKEKGRPVQNNQIKLPEFPYPNGVHVIDKDHPSQQVHAYNRLLRDGRLTECVSLL 445

Query: 1548 EDMERNGLLDMDKVYHAGFFKICKNQKAVKEAFRFIKLIPNPTLSTFNMLMSVCAISQDS 1369
            EDMER GLLDM+K+YHA FFKICK QKAV EAFRF KL+PNPTLST+NMLMSVCA SQDS
Sbjct: 446  EDMERRGLLDMNKIYHAKFFKICKIQKAVNEAFRFCKLVPNPTLSTYNMLMSVCASSQDS 505

Query: 1368 EGAFQVLHLVQEAGLKADCKLYTTLISTCAKTGKVDTMFKVFHEMVNAEVEPNVHTYGAL 1189
             GAFQVL L + +GLKADC+LYTTLISTCAK+GKVDTMF+VFH+MVNA VEPNVHTYGAL
Sbjct: 506  SGAFQVLQLARGSGLKADCRLYTTLISTCAKSGKVDTMFEVFHKMVNAGVEPNVHTYGAL 565

Query: 1188 IDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQ 1009
            IDGCA+AGQ+AKAFGAYGIM SK VKPDRVVFNALI ACGQSGAVDRAFDVLAEMRAE Q
Sbjct: 566  IDGCARAGQLAKAFGAYGIMSSKKVKPDRVVFNALINACGQSGAVDRAFDVLAEMRAETQ 625

Query: 1008 PIDPDHVTVGALIKACANAGQVERAREVYNMIHEYNIKGTPEVYTIAVNSCSRTGDWEFA 829
            PIDPDH+TVGALI ACA AGQ+ RA+EVYNM+HE+NIKGTPEVYTIAVN CS+TGDWEFA
Sbjct: 626  PIDPDHITVGALINACAKAGQINRAKEVYNMMHEFNIKGTPEVYTIAVNCCSQTGDWEFA 685

Query: 828  CHVYSDMTRKGVAPDEMFFSALIDVAGHARKLDNAFDVLQKARDQGVHIGIISYSSLMGA 649
              VY DM RK VAPDEMF SALIDVAGHA K+D AF++LQ+AR QG+ +GII YSSLMGA
Sbjct: 686  RSVYDDMKRKDVAPDEMFLSALIDVAGHAGKVDVAFEILQEARIQGMQLGIIPYSSLMGA 745

Query: 648  CSNAKNWQKAVELYEDIKSIKLKPTVSTMNALITSLCDGEQLQKAVDVLSEMKRVGLCPN 469
            CSNAKNWQKA+ELYEDIKSIK+ PTV T+NALIT+LCDG+QL KA++V+SEMK   LCPN
Sbjct: 746  CSNAKNWQKALELYEDIKSIKVNPTVPTLNALITALCDGDQLPKAIEVMSEMKSFRLCPN 805

Query: 468  TITYSILFVASEKKDDLEVGMSLFSQAKRDGVAPNLVMCRCLIAMCLRRFEKACALGEPV 289
            T+TYSILFVASE+KDDLEVG+ L SQAK D +AP L+M +C+I MCLRR+EK CALGEPV
Sbjct: 806  TVTYSILFVASERKDDLEVGLRLLSQAKEDCIAPTLIMYKCIIGMCLRRYEKVCALGEPV 865

Query: 288  LSFNSGHPQIDSKWTSLALMVYREAIVAGVVPTMEECSQVLGCLKLPYDASLRNRLTENL 109
            LSF+SG PQ+ ++WTSLALMVYRE I AG   TME  SQVLGCL+LP+DASL++RL ENL
Sbjct: 866  LSFDSGRPQMKNEWTSLALMVYRETIAAGEKLTMEVVSQVLGCLQLPFDASLKHRLVENL 925

Query: 108  QVSFVTSRSSNLFSLVDGFGEYDPR 34
             V+  +S+ SNL SLVDGFGEYDPR
Sbjct: 926  GVTTDSSKVSNLCSLVDGFGEYDPR 950


>gb|KJB11196.1| hypothetical protein B456_001G246900 [Gossypium raimondii]
          Length = 999

 Score =  935 bits (2416), Expect = 0.0
 Identities = 517/908 (56%), Positives = 636/908 (70%), Gaps = 9/908 (0%)
 Frame = -1

Query: 2730 RRKCKKLGF-HIQSPRFLFRASFNSQXXXXXXXXXXXXXXXIFYLN--YSKRKKVREMSG 2560
            R+K K L F   Q PRF+ RAS +S                + + N  + K +  +++SG
Sbjct: 53   RKKRKNLAFLRFQPPRFVSRASIDSNLVFVVIGVTALSALSLAFYNQFFRKSQTSKKVSG 112

Query: 2559 PSILALSERI--RCIMNQGNVDQTSVTEDLEWRMSVTESRNLMKG-RETGHASENQLVQL 2389
             S  AL ++   + ++ Q    Q   T DL+      E+  L +  +E   ASE++ V L
Sbjct: 113  SSRSALRQQRQGKDVVIQTADHQILETGDLQRDTFAKENGGLTEHMKEVNDASESKEVLL 172

Query: 2388 QEESVLMHEENLITNPLESHGFDINAYNATDSLSSRDSEVMGPSFPPSVLSESGTLQSVN 2209
            QE +V+ + ++++T   ES+G D  A+NA DS    +S        P+VL ESG  Q   
Sbjct: 173  QETAVV-NGDSMLTKASESNGADFLAFNANDSDVLEESGTTVLPLQPTVLLESGAGQPFT 231

Query: 2208 FATEMPELEFEVCGQETELRSNMHKLMAREKLTVASAPMDTALKEVNEHNKSNPELGKES 2029
            FAT+   L  E   +  E  ++  +L    K + +S  ++ A+  + E    N ++    
Sbjct: 232  FATQRSGLHLEE--RVNEFEADYPRLAVEPKSSASSVLVEDAVVLIGEDKVRNYDI---- 285

Query: 2028 ETISCVSNFKDSVREELYMFYEANRSALKCLANLNGSNTLSSHASVRDSKTFSLIRCSTT 1849
                    F++S REEL+ FYEA+    K  +NL     +SSH    +S  FS ++    
Sbjct: 286  --------FRESGREELHTFYEADHLVAKSSSNLT-LKPVSSHFLSSNSNKFSSLKLKLN 336

Query: 1848 KGVES---LAKEFLYTAENFKGKTPLGLYKEGSPHERKDLGKSRGFSRDKGNRILPQNGH 1678
              +      AK  L TA+  +GK     ++ G  H+RK LG+ R   RDKG + L Q   
Sbjct: 337  SELNKDALSAKNSLQTADMVEGKVTQANFQGGFSHKRKHLGRGRESPRDKGKKHLIQEKD 396

Query: 1677 RNFPHSPHPNGKDVDDTHNLAHKSSAYNRFLRNGRLIDCVELLEDMERNGLLDMDKVYHA 1498
                  P PNG+  +D H+     S YN  LR GRL D V+LLEDME+ GLLDMDKVYHA
Sbjct: 397  TKLAQFPFPNGELANDKHHPEEYLSYYNHLLRCGRLSDSVDLLEDMEQKGLLDMDKVYHA 456

Query: 1497 GFFKICKNQKAVKEAFRFIKLIPNPTLSTFNMLMSVCAISQDSEGAFQVLHLVQEAGLKA 1318
             FFKIC  QKAVKEAFRF KLI NPTLSTFNMLMSVC  S+DSEGAFQVL LVQEAG +A
Sbjct: 457  KFFKICSKQKAVKEAFRFTKLIANPTLSTFNMLMSVCGCSKDSEGAFQVLRLVQEAGFQA 516

Query: 1317 DCKLYTTLISTCAKTGKVDTMFKVFHEMVNAEVEPNVHTYGALIDGCAKAGQVAKAFGAY 1138
            DC LYTTLISTCAK+GKVDTMF+VFHEMVN+ VEPNV+TYGALIDGCA+AGQV KAFGAY
Sbjct: 517  DCILYTTLISTCAKSGKVDTMFEVFHEMVNSGVEPNVNTYGALIDGCARAGQVPKAFGAY 576

Query: 1137 GIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHVTVGALIKACA 958
            GIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM AE QPIDPDH+TVGALIKAC+
Sbjct: 577  GIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMMAETQPIDPDHITVGALIKACS 636

Query: 957  NAGQVERAREVYNMIHEYNIKGTPEVYTIAVNSCSRTGDWEFACHVYSDMTRKGVAPDEM 778
            NAGQVERAREVY M+H++NI+GTPEVYTIAVN CS+TGDWEFAC VY+DM +KGVAPDE+
Sbjct: 637  NAGQVERAREVYKMMHKFNIRGTPEVYTIAVNCCSQTGDWEFACGVYNDMKKKGVAPDEV 696

Query: 777  FFSALIDVAGHARKLDNAFDVLQKARDQGVHIGIISYSSLMGACSNAKNWQKAVELYEDI 598
            F SALIDVAGHA KLD AF++LQ+A++ G++ GI+SYSSLMGACSNA+NWQKA+ELYE+I
Sbjct: 697  FISALIDVAGHAGKLDAAFELLQEAKNHGINSGIVSYSSLMGACSNARNWQKALELYENI 756

Query: 597  KSIKLKPTVSTMNALITSLCDGEQLQKAVDVLSEMKRVGLCPNTITYSILFVASEKKDDL 418
            K++KLK TVST+NALITSLC+  QL KA++VLSEM+  GL PN ITYSIL VASE+  DL
Sbjct: 757  KALKLKLTVSTVNALITSLCEANQLPKAMEVLSEMEESGLSPNIITYSILLVASERNGDL 816

Query: 417  EVGMSLFSQAKRDGVAPNLVMCRCLIAMCLRRFEKACALGEPVLSFNSGHPQIDSKWTSL 238
            EVG+ L S+A+ DG+APNLVM RC+I MCLRRF KACA+GEPVLSFNSG P I++KW S+
Sbjct: 817  EVGLMLLSKARDDGIAPNLVMSRCIIGMCLRRFVKACAVGEPVLSFNSGRPHIENKWMSV 876

Query: 237  ALMVYREAIVAGVVPTMEECSQVLGCLKLPYDASLRNRLTENLQVSFVTSRSSNLFSLVD 58
            AL VYRE I AG VPTME  S++LGCL+LP D SLR+RL ENL+V    SRSS+L SL+D
Sbjct: 877  ALTVYRETIDAGTVPTMEVVSKILGCLQLPRDDSLRSRLVENLEVIADPSRSSSLGSLID 936

Query: 57   GFGEYDPR 34
            GFGEYDPR
Sbjct: 937  GFGEYDPR 944


>ref|XP_012442072.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Gossypium raimondii]
            gi|763743696|gb|KJB11195.1| hypothetical protein
            B456_001G246900 [Gossypium raimondii]
          Length = 1106

 Score =  935 bits (2416), Expect = 0.0
 Identities = 517/908 (56%), Positives = 636/908 (70%), Gaps = 9/908 (0%)
 Frame = -1

Query: 2730 RRKCKKLGF-HIQSPRFLFRASFNSQXXXXXXXXXXXXXXXIFYLN--YSKRKKVREMSG 2560
            R+K K L F   Q PRF+ RAS +S                + + N  + K +  +++SG
Sbjct: 53   RKKRKNLAFLRFQPPRFVSRASIDSNLVFVVIGVTALSALSLAFYNQFFRKSQTSKKVSG 112

Query: 2559 PSILALSERI--RCIMNQGNVDQTSVTEDLEWRMSVTESRNLMKG-RETGHASENQLVQL 2389
             S  AL ++   + ++ Q    Q   T DL+      E+  L +  +E   ASE++ V L
Sbjct: 113  SSRSALRQQRQGKDVVIQTADHQILETGDLQRDTFAKENGGLTEHMKEVNDASESKEVLL 172

Query: 2388 QEESVLMHEENLITNPLESHGFDINAYNATDSLSSRDSEVMGPSFPPSVLSESGTLQSVN 2209
            QE +V+ + ++++T   ES+G D  A+NA DS    +S        P+VL ESG  Q   
Sbjct: 173  QETAVV-NGDSMLTKASESNGADFLAFNANDSDVLEESGTTVLPLQPTVLLESGAGQPFT 231

Query: 2208 FATEMPELEFEVCGQETELRSNMHKLMAREKLTVASAPMDTALKEVNEHNKSNPELGKES 2029
            FAT+   L  E   +  E  ++  +L    K + +S  ++ A+  + E    N ++    
Sbjct: 232  FATQRSGLHLEE--RVNEFEADYPRLAVEPKSSASSVLVEDAVVLIGEDKVRNYDI---- 285

Query: 2028 ETISCVSNFKDSVREELYMFYEANRSALKCLANLNGSNTLSSHASVRDSKTFSLIRCSTT 1849
                    F++S REEL+ FYEA+    K  +NL     +SSH    +S  FS ++    
Sbjct: 286  --------FRESGREELHTFYEADHLVAKSSSNLT-LKPVSSHFLSSNSNKFSSLKLKLN 336

Query: 1848 KGVES---LAKEFLYTAENFKGKTPLGLYKEGSPHERKDLGKSRGFSRDKGNRILPQNGH 1678
              +      AK  L TA+  +GK     ++ G  H+RK LG+ R   RDKG + L Q   
Sbjct: 337  SELNKDALSAKNSLQTADMVEGKVTQANFQGGFSHKRKHLGRGRESPRDKGKKHLIQEKD 396

Query: 1677 RNFPHSPHPNGKDVDDTHNLAHKSSAYNRFLRNGRLIDCVELLEDMERNGLLDMDKVYHA 1498
                  P PNG+  +D H+     S YN  LR GRL D V+LLEDME+ GLLDMDKVYHA
Sbjct: 397  TKLAQFPFPNGELANDKHHPEEYLSYYNHLLRCGRLSDSVDLLEDMEQKGLLDMDKVYHA 456

Query: 1497 GFFKICKNQKAVKEAFRFIKLIPNPTLSTFNMLMSVCAISQDSEGAFQVLHLVQEAGLKA 1318
             FFKIC  QKAVKEAFRF KLI NPTLSTFNMLMSVC  S+DSEGAFQVL LVQEAG +A
Sbjct: 457  KFFKICSKQKAVKEAFRFTKLIANPTLSTFNMLMSVCGCSKDSEGAFQVLRLVQEAGFQA 516

Query: 1317 DCKLYTTLISTCAKTGKVDTMFKVFHEMVNAEVEPNVHTYGALIDGCAKAGQVAKAFGAY 1138
            DC LYTTLISTCAK+GKVDTMF+VFHEMVN+ VEPNV+TYGALIDGCA+AGQV KAFGAY
Sbjct: 517  DCILYTTLISTCAKSGKVDTMFEVFHEMVNSGVEPNVNTYGALIDGCARAGQVPKAFGAY 576

Query: 1137 GIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHVTVGALIKACA 958
            GIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM AE QPIDPDH+TVGALIKAC+
Sbjct: 577  GIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMMAETQPIDPDHITVGALIKACS 636

Query: 957  NAGQVERAREVYNMIHEYNIKGTPEVYTIAVNSCSRTGDWEFACHVYSDMTRKGVAPDEM 778
            NAGQVERAREVY M+H++NI+GTPEVYTIAVN CS+TGDWEFAC VY+DM +KGVAPDE+
Sbjct: 637  NAGQVERAREVYKMMHKFNIRGTPEVYTIAVNCCSQTGDWEFACGVYNDMKKKGVAPDEV 696

Query: 777  FFSALIDVAGHARKLDNAFDVLQKARDQGVHIGIISYSSLMGACSNAKNWQKAVELYEDI 598
            F SALIDVAGHA KLD AF++LQ+A++ G++ GI+SYSSLMGACSNA+NWQKA+ELYE+I
Sbjct: 697  FISALIDVAGHAGKLDAAFELLQEAKNHGINSGIVSYSSLMGACSNARNWQKALELYENI 756

Query: 597  KSIKLKPTVSTMNALITSLCDGEQLQKAVDVLSEMKRVGLCPNTITYSILFVASEKKDDL 418
            K++KLK TVST+NALITSLC+  QL KA++VLSEM+  GL PN ITYSIL VASE+  DL
Sbjct: 757  KALKLKLTVSTVNALITSLCEANQLPKAMEVLSEMEESGLSPNIITYSILLVASERNGDL 816

Query: 417  EVGMSLFSQAKRDGVAPNLVMCRCLIAMCLRRFEKACALGEPVLSFNSGHPQIDSKWTSL 238
            EVG+ L S+A+ DG+APNLVM RC+I MCLRRF KACA+GEPVLSFNSG P I++KW S+
Sbjct: 817  EVGLMLLSKARDDGIAPNLVMSRCIIGMCLRRFVKACAVGEPVLSFNSGRPHIENKWMSV 876

Query: 237  ALMVYREAIVAGVVPTMEECSQVLGCLKLPYDASLRNRLTENLQVSFVTSRSSNLFSLVD 58
            AL VYRE I AG VPTME  S++LGCL+LP D SLR+RL ENL+V    SRSS+L SL+D
Sbjct: 877  ALTVYRETIDAGTVPTMEVVSKILGCLQLPRDDSLRSRLVENLEVIADPSRSSSLGSLID 936

Query: 57   GFGEYDPR 34
            GFGEYDPR
Sbjct: 937  GFGEYDPR 944


>ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Populus trichocarpa]
            gi|550341229|gb|EEE86674.2| hypothetical protein
            POPTR_0004s17400g [Populus trichocarpa]
          Length = 1104

 Score =  934 bits (2413), Expect = 0.0
 Identities = 508/864 (58%), Positives = 615/864 (71%), Gaps = 9/864 (1%)
 Frame = -1

Query: 2598 NYSKRKKVREMS----GPSILALSERIRCIMNQGNVDQTSVTEDLEWRMSVTESR-NLMK 2434
            N    KK+   S    G    A S+  R I+NQ    Q      L       ES+ ++ K
Sbjct: 99   NIKNSKKITSSSIQVLGSPSFAFSQLGRSIVNQITGSQFLHFGGLHREAREVESQGSVEK 158

Query: 2433 GRETGHASENQLVQLQ-EESVLMHEENLITNPLESHGFDINAYNATDSLSSRDSEVMGPS 2257
              E  H  E +   +Q +E+  +H  +L+   +ES G +  A N  D++   +SEV    
Sbjct: 159  ASENSHEFEEKETHVQFQETASLHGSSLLIKAVESSGANFVAANVCDTVVVEESEVGDAR 218

Query: 2256 FPP--SVLSESGTLQSVNFATEMPELEFEVCGQETELRSNMHKLMAREKLTVASAPMDTA 2083
              P  SVLSESG+   + FAT+M EL  E  G+E E  S +   + + K      P+D  
Sbjct: 219  VSPLPSVLSESGSALPLIFATQMTELTQEKSGEEIEFGSELSGSVEKVKSNAVLVPVDNE 278

Query: 2082 LKEVNEHNKSNPELGKESETISCVSNFKDSVREELYMFYEANRSALKCLANLNGSNTLSS 1903
              E  E +  N  + +             SVRE+LY FY ANRS +K  +NL G    SS
Sbjct: 279  SIEKAELSSYNGAISQ-------------SVREDLYTFYGANRSVVKSASNL-GLKETSS 324

Query: 1902 HASVRDSKTFSLIRCSTTKGVESLAKEF-LYTAENFKGKTPLGLYKEGSPHERKDLGKSR 1726
            HAS+  SK FS ++ +T    E L+ +  L  A++ +   P   Y+ GS H+ K+L  S+
Sbjct: 325  HASLLKSKRFSSLKMNTGLETEDLSSQQPLQAADHVQKTMPPAHYEGGSFHKSKNLPGSK 384

Query: 1725 GFSRDKGNRILPQNGHRNFPHSPHPNGKDVDDTHNLAHKSSAYNRFLRNGRLIDCVELLE 1546
                ++ + I  Q+ H      P PNG       +   + +AYNR LR GRL +C++LLE
Sbjct: 385  ----ERKHPI--QDSHSKLRQLPSPNGIPSKVKDHPPEEYNAYNRLLREGRLAECLDLLE 438

Query: 1545 DMERNGLLDMDKVYHAGFFKICKNQKAVKEAFRFIKLIPNPTLSTFNMLMSVCAISQDSE 1366
            DMER GLLDM+KVYH  FFK+C++QKAVKEAFRF KL+ NPTLSTFNMLMSVCA SQ+S 
Sbjct: 439  DMERRGLLDMNKVYHVKFFKLCRSQKAVKEAFRFCKLVQNPTLSTFNMLMSVCATSQNSA 498

Query: 1365 GAFQVLHLVQEAGLKADCKLYTTLISTCAKTGKVDTMFKVFHEMVNAEVEPNVHTYGALI 1186
            GAF+VL L +  GLKADCKLYTTLISTCAK+GKVD MF+VFHEMVNA VEPNVHTYGALI
Sbjct: 499  GAFEVLQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALI 558

Query: 1185 DGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQP 1006
            DGCA+AGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM  EAQP
Sbjct: 559  DGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMTGEAQP 618

Query: 1005 IDPDHVTVGALIKACANAGQVERAREVYNMIHEYNIKGTPEVYTIAVNSCSRTGDWEFAC 826
            IDPDH+TVGALIKAC NAGQV+RA+EVYNM+H+YNIKGTPEVYTIA+NSCS+ GDWEFAC
Sbjct: 619  IDPDHITVGALIKACTNAGQVDRAQEVYNMVHKYNIKGTPEVYTIAINSCSQIGDWEFAC 678

Query: 825  HVYSDMTRKGVAPDEMFFSALIDVAGHARKLDNAFDVLQKARDQGVHIGIISYSSLMGAC 646
             VY DMTRKGV PDEMF SALIDVAGHA K+D AF+++Q A+ +G  +GII YSSLMGAC
Sbjct: 679  KVYDDMTRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQVAKAKGAQLGIIPYSSLMGAC 738

Query: 645  SNAKNWQKAVELYEDIKSIKLKPTVSTMNALITSLCDGEQLQKAVDVLSEMKRVGLCPNT 466
             NAKNWQK +ELYEDIKS+K+KPTV+TMNALIT+LCDG+QL KA++VLSEMK  GL PNT
Sbjct: 739  CNAKNWQKGLELYEDIKSMKIKPTVATMNALITALCDGDQLPKALEVLSEMKAWGLRPNT 798

Query: 465  ITYSILFVASEKKDDLEVGMSLFSQAKRDGVAPNLVMCRCLIAMCLRRFEKACALGEPVL 286
            ITYSIL VASE+KDDLE G+ L SQAK+D VAP L+M +C+I+MCLR+FE AC LGE VL
Sbjct: 799  ITYSILSVASERKDDLEAGLMLLSQAKKDCVAPTLIMSKCIISMCLRKFENACTLGEAVL 858

Query: 285  SFNSGHPQIDSKWTSLALMVYREAIVAGVVPTMEECSQVLGCLKLPYDASLRNRLTENLQ 106
            SFNSG  QI++KWTS+ALMVYR  + AG  PT+E  SQVLGCL++P DA+L+NRL ENL 
Sbjct: 859  SFNSGRAQIENKWTSVALMVYRGTMAAGEKPTIELVSQVLGCLQIPCDATLKNRLVENLG 918

Query: 105  VSFVTSRSSNLFSLVDGFGEYDPR 34
            V+ V+SR SNL SLVDGFGEYDPR
Sbjct: 919  VTAVSSRYSNLCSLVDGFGEYDPR 942


>ref|XP_011037246.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X2 [Populus euphratica]
          Length = 1104

 Score =  929 bits (2401), Expect = 0.0
 Identities = 508/864 (58%), Positives = 614/864 (71%), Gaps = 9/864 (1%)
 Frame = -1

Query: 2598 NYSKRKKVREMS----GPSILALSERIRCIMNQGNVDQTSVTEDLEWRMSVTESR-NLMK 2434
            N    KK+   S    G    A S+  R I+N     Q      L       ES+ ++ K
Sbjct: 99   NIKNSKKITSSSIQVLGSPSFAFSQLGRSIVNHITGSQFLHFGGLHREAHEVESQGSVKK 158

Query: 2433 GRETGHASENQLVQLQ-EESVLMHEENLITNPLESHGFDINAYNATDSLSSRDSEVMGPS 2257
              E  H  E +   +Q +E+  +H  +L+   +ES G +  A N  D++   +SEV    
Sbjct: 159  ASENSHEIEEKETHVQFQETASLHGSSLLIKAVESSGANFVAANVCDTVVVEESEVGDAR 218

Query: 2256 FPP--SVLSESGTLQSVNFATEMPELEFEVCGQETELRSNMHKLMAREKLTVASAPMDTA 2083
              P  SV SESG+   + FAT+M EL  E  G+E E  S + + + + K      P+D  
Sbjct: 219  VSPLPSVHSESGSALPLIFATQMTELTREKSGEEIEFGSELSESVEKVKSNAVLVPVDN- 277

Query: 2082 LKEVNEHNKSNPELGKESETISCVSNFKDSVREELYMFYEANRSALKCLANLNGSNTLSS 1903
                   +    EL   +  IS       SVRE+LY FY ANRS +K  +NL G    SS
Sbjct: 278  ------ESIDKAELSNYNGAIS------QSVREDLYTFYGANRSVVKSASNL-GLKETSS 324

Query: 1902 HASVRDSKTFSLIRCSTTKGVESLAKEF-LYTAENFKGKTPLGLYKEGSPHERKDLGKSR 1726
            HAS+  SK FS ++ +T    E L+ +  L  A++ +   PL   + GS H+ K+L +SR
Sbjct: 325  HASLLKSKRFSSLKMNTGLETEDLSSQQPLQAADHVQKIMPLAHNEGGSFHKSKNLPRSR 384

Query: 1725 GFSRDKGNRILPQNGHRNFPHSPHPNGKDVDDTHNLAHKSSAYNRFLRNGRLIDCVELLE 1546
                ++ + I  Q+ H      P PNG       + +   +AYNR LR GRL +C++LLE
Sbjct: 385  ----ERKHPI--QDSHSKLRQLPSPNGIPSKVKDHPSEDYNAYNRLLREGRLAECLDLLE 438

Query: 1545 DMERNGLLDMDKVYHAGFFKICKNQKAVKEAFRFIKLIPNPTLSTFNMLMSVCAISQDSE 1366
            DMER GLLDM+KVYH  FFK+C++QKAVKEAFRF KL+ NPTLSTFNMLMSVCA SQ+S 
Sbjct: 439  DMERRGLLDMNKVYHVKFFKLCRSQKAVKEAFRFCKLVQNPTLSTFNMLMSVCASSQNSA 498

Query: 1365 GAFQVLHLVQEAGLKADCKLYTTLISTCAKTGKVDTMFKVFHEMVNAEVEPNVHTYGALI 1186
            GAF+VL L +  GLKADCKLYTTLISTCAK+GKVD MF+VFHEMVNA VEPNVHTYGALI
Sbjct: 499  GAFEVLQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALI 558

Query: 1185 DGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQP 1006
            DGCA+AGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM  EAQP
Sbjct: 559  DGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMTGEAQP 618

Query: 1005 IDPDHVTVGALIKACANAGQVERAREVYNMIHEYNIKGTPEVYTIAVNSCSRTGDWEFAC 826
            IDPDH+TVGALIKAC NAGQV+RA+EVYNM+H+YNIKGTPEVYTIA+NS S+ GDWEFAC
Sbjct: 619  IDPDHITVGALIKACTNAGQVDRAQEVYNMVHKYNIKGTPEVYTIAINSSSQIGDWEFAC 678

Query: 825  HVYSDMTRKGVAPDEMFFSALIDVAGHARKLDNAFDVLQKARDQGVHIGIISYSSLMGAC 646
             VY DMTRKGV PDEMF SALIDVAGHA K+D AF+++Q+A+ +G  +GII YSSLMGAC
Sbjct: 679  KVYDDMTRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQEAKAKGAQLGIIPYSSLMGAC 738

Query: 645  SNAKNWQKAVELYEDIKSIKLKPTVSTMNALITSLCDGEQLQKAVDVLSEMKRVGLCPNT 466
             NAKNWQK +ELYEDIKS+KLKPTV+T+NALIT+LCDG+QL KA++VLSEMK  GL PNT
Sbjct: 739  CNAKNWQKGLELYEDIKSMKLKPTVATLNALITALCDGDQLSKALEVLSEMKVWGLRPNT 798

Query: 465  ITYSILFVASEKKDDLEVGMSLFSQAKRDGVAPNLVMCRCLIAMCLRRFEKACALGEPVL 286
            ITYSIL VASE+KDDLE G+ L SQAK+D VAP L+M +C+I+MCLR+FE AC LGEPVL
Sbjct: 799  ITYSILSVASERKDDLEAGLMLLSQAKKDCVAPTLIMVKCIISMCLRKFENACTLGEPVL 858

Query: 285  SFNSGHPQIDSKWTSLALMVYREAIVAGVVPTMEECSQVLGCLKLPYDASLRNRLTENLQ 106
            SFNSG  QI++KWTS+ALM YR  I AG  PT+E  SQVLGCL++P DA+L+NRL ENL 
Sbjct: 859  SFNSGRAQIENKWTSVALMAYRGTIAAGEKPTIELVSQVLGCLQIPCDATLKNRLVENLG 918

Query: 105  VSFVTSRSSNLFSLVDGFGEYDPR 34
            V+ V SR SNL SLVDGFGEYDPR
Sbjct: 919  VTAVPSRYSNLCSLVDGFGEYDPR 942


>ref|XP_011037244.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Populus euphratica]
          Length = 1109

 Score =  929 bits (2401), Expect = 0.0
 Identities = 508/864 (58%), Positives = 614/864 (71%), Gaps = 9/864 (1%)
 Frame = -1

Query: 2598 NYSKRKKVREMS----GPSILALSERIRCIMNQGNVDQTSVTEDLEWRMSVTESR-NLMK 2434
            N    KK+   S    G    A S+  R I+N     Q      L       ES+ ++ K
Sbjct: 99   NIKNSKKITSSSIQVLGSPSFAFSQLGRSIVNHITGSQFLHFGGLHREAHEVESQGSVKK 158

Query: 2433 GRETGHASENQLVQLQ-EESVLMHEENLITNPLESHGFDINAYNATDSLSSRDSEVMGPS 2257
              E  H  E +   +Q +E+  +H  +L+   +ES G +  A N  D++   +SEV    
Sbjct: 159  ASENSHEIEEKETHVQFQETASLHGSSLLIKAVESSGANFVAANVCDTVVVEESEVGDAR 218

Query: 2256 FPP--SVLSESGTLQSVNFATEMPELEFEVCGQETELRSNMHKLMAREKLTVASAPMDTA 2083
              P  SV SESG+   + FAT+M EL  E  G+E E  S + + + + K      P+D  
Sbjct: 219  VSPLPSVHSESGSALPLIFATQMTELTREKSGEEIEFGSELSESVEKVKSNAVLVPVDN- 277

Query: 2082 LKEVNEHNKSNPELGKESETISCVSNFKDSVREELYMFYEANRSALKCLANLNGSNTLSS 1903
                   +    EL   +  IS       SVRE+LY FY ANRS +K  +NL G    SS
Sbjct: 278  ------ESIDKAELSNYNGAIS------QSVREDLYTFYGANRSVVKSASNL-GLKETSS 324

Query: 1902 HASVRDSKTFSLIRCSTTKGVESLAKEF-LYTAENFKGKTPLGLYKEGSPHERKDLGKSR 1726
            HAS+  SK FS ++ +T    E L+ +  L  A++ +   PL   + GS H+ K+L +SR
Sbjct: 325  HASLLKSKRFSSLKMNTGLETEDLSSQQPLQAADHVQKIMPLAHNEGGSFHKSKNLPRSR 384

Query: 1725 GFSRDKGNRILPQNGHRNFPHSPHPNGKDVDDTHNLAHKSSAYNRFLRNGRLIDCVELLE 1546
                ++ + I  Q+ H      P PNG       + +   +AYNR LR GRL +C++LLE
Sbjct: 385  ----ERKHPI--QDSHSKLRQLPSPNGIPSKVKDHPSEDYNAYNRLLREGRLAECLDLLE 438

Query: 1545 DMERNGLLDMDKVYHAGFFKICKNQKAVKEAFRFIKLIPNPTLSTFNMLMSVCAISQDSE 1366
            DMER GLLDM+KVYH  FFK+C++QKAVKEAFRF KL+ NPTLSTFNMLMSVCA SQ+S 
Sbjct: 439  DMERRGLLDMNKVYHVKFFKLCRSQKAVKEAFRFCKLVQNPTLSTFNMLMSVCASSQNSA 498

Query: 1365 GAFQVLHLVQEAGLKADCKLYTTLISTCAKTGKVDTMFKVFHEMVNAEVEPNVHTYGALI 1186
            GAF+VL L +  GLKADCKLYTTLISTCAK+GKVD MF+VFHEMVNA VEPNVHTYGALI
Sbjct: 499  GAFEVLQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALI 558

Query: 1185 DGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQP 1006
            DGCA+AGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM  EAQP
Sbjct: 559  DGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMTGEAQP 618

Query: 1005 IDPDHVTVGALIKACANAGQVERAREVYNMIHEYNIKGTPEVYTIAVNSCSRTGDWEFAC 826
            IDPDH+TVGALIKAC NAGQV+RA+EVYNM+H+YNIKGTPEVYTIA+NS S+ GDWEFAC
Sbjct: 619  IDPDHITVGALIKACTNAGQVDRAQEVYNMVHKYNIKGTPEVYTIAINSSSQIGDWEFAC 678

Query: 825  HVYSDMTRKGVAPDEMFFSALIDVAGHARKLDNAFDVLQKARDQGVHIGIISYSSLMGAC 646
             VY DMTRKGV PDEMF SALIDVAGHA K+D AF+++Q+A+ +G  +GII YSSLMGAC
Sbjct: 679  KVYDDMTRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQEAKAKGAQLGIIPYSSLMGAC 738

Query: 645  SNAKNWQKAVELYEDIKSIKLKPTVSTMNALITSLCDGEQLQKAVDVLSEMKRVGLCPNT 466
             NAKNWQK +ELYEDIKS+KLKPTV+T+NALIT+LCDG+QL KA++VLSEMK  GL PNT
Sbjct: 739  CNAKNWQKGLELYEDIKSMKLKPTVATLNALITALCDGDQLSKALEVLSEMKVWGLRPNT 798

Query: 465  ITYSILFVASEKKDDLEVGMSLFSQAKRDGVAPNLVMCRCLIAMCLRRFEKACALGEPVL 286
            ITYSIL VASE+KDDLE G+ L SQAK+D VAP L+M +C+I+MCLR+FE AC LGEPVL
Sbjct: 799  ITYSILSVASERKDDLEAGLMLLSQAKKDCVAPTLIMVKCIISMCLRKFENACTLGEPVL 858

Query: 285  SFNSGHPQIDSKWTSLALMVYREAIVAGVVPTMEECSQVLGCLKLPYDASLRNRLTENLQ 106
            SFNSG  QI++KWTS+ALM YR  I AG  PT+E  SQVLGCL++P DA+L+NRL ENL 
Sbjct: 859  SFNSGRAQIENKWTSVALMAYRGTIAAGEKPTIELVSQVLGCLQIPCDATLKNRLVENLG 918

Query: 105  VSFVTSRSSNLFSLVDGFGEYDPR 34
            V+ V SR SNL SLVDGFGEYDPR
Sbjct: 919  VTAVPSRYSNLCSLVDGFGEYDPR 942


>ref|XP_009589920.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Nicotiana tomentosiformis]
          Length = 1094

 Score =  927 bits (2395), Expect = 0.0
 Identities = 524/926 (56%), Positives = 639/926 (69%), Gaps = 19/926 (2%)
 Frame = -1

Query: 2754 LRPPGV-RYRRKCKKLGFHIQ--SPRFLFRASFNSQXXXXXXXXXXXXXXXIFYLNYSKR 2584
            LR PG+ R RRKC+ +GF     S RF+ RAS +SQ               I +  +SKR
Sbjct: 40   LRSPGLLRLRRKCRNIGFQFSAHSSRFVLRASLDSQSVVVVAAVVTISALTIIFFEFSKR 99

Query: 2583 K-KVREMSGPSILALSERIRCIMNQGNVDQTSVTEDLEWRMSVTESRNLMKGRETGHASE 2407
               ++E+S    LAL  +IR +MN       ++    E +   T  + + K     H + 
Sbjct: 100  NANIKEISAELTLALRRQIRHVMNWFPRHVFALINIQEEKSIETPMKEVSKVSNE-HENG 158

Query: 2406 NQLVQLQEESVLMHEENLITNPLESHGFDINAYNATDSLS--------SRDSEVMGPSFP 2251
               VQL    ++   + +ITN +ES   +  A ++  SL+          +S+V+  SF 
Sbjct: 159  GTDVQLGGTYLM---QTVITNKIESADANQMASSSGGSLTLGAPGSNTHAESDVIPSSFV 215

Query: 2250 PSVLSE------SGTLQSVNFATEMPELEFEVCGQETELRSNMHKLMAREKLTVASAPMD 2089
              + +        GT  S    TE    E  V G    +  N+ K +   K T  +  +D
Sbjct: 216  AELHNNYLQEHLQGTKTSNRLTTEEVSSEHSV-GLFPAI--NIDKGIEETKKTDHALMVD 272

Query: 2088 TALKEVNEHNKSNPELGKESETISCVSNFKDSVREELYMFYEANRSALKCLANLNGSNTL 1909
              LK  ++H         E E       F+DS R+ELY F+EA+        NLNG   L
Sbjct: 273  GGLKIAHKHVA-------EDEVSIHNLIFRDSARKELYSFFEASTK------NLNGQKAL 319

Query: 1908 SSHASVRDSKTFSLIRCSTTKGVESLAKEFLYTAENFKGKTPLGLYKEGSPHERKDLGKS 1729
            +SHAS      FS      T  V S+       AE+FK K P G YKEG P   KD+GK 
Sbjct: 320  TSHASGERISVFS-----HTSKVSSIQ------AEDFKEKRPHGCYKEG-PFNNKDIGKR 367

Query: 1728 RGFSRDKGNRILPQNGH-RNFPHSPHPNGKDVDDTHNLAHKSSAYNRFLRNGRLIDCVEL 1552
            +     K   IL  NG+ + FP  P+P G  V D    + +  AY  FLR GRL+DC+E 
Sbjct: 368  KHHFTKKEKSILLDNGNTKQFP-IPNPKGIQVCDGPQPSDQFRAYRHFLREGRLMDCIER 426

Query: 1551 LEDMERNGLLDMDKVYHAGFFKICKNQKAVKEAFRFIKLIPNPTLSTFNMLMSVCAISQD 1372
            L++MER+G L+MDKVYHAGFF+ CK+QKAVKEAFRF KLI NPTLSTFNML+SVCA S+D
Sbjct: 427  LDNMERHGSLNMDKVYHAGFFQACKSQKAVKEAFRFTKLIQNPTLSTFNMLLSVCASSRD 486

Query: 1371 SEGAFQVLHLVQEAGLKADCKLYTTLISTCAKTGKVDTMFKVFHEMVNAEVEPNVHTYGA 1192
             EGAF+VL LV+E GLK DCKLYTTLISTCAK GKVDTMF+VFHEMVNA VEPNV+TYGA
Sbjct: 487  LEGAFRVLQLVRETGLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNVNTYGA 546

Query: 1191 LIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEA 1012
            LIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVL+EM+AEA
Sbjct: 547  LIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLSEMKAEA 606

Query: 1011 QPIDPDHVTVGALIKACANAGQVERAREVYNMIHEYNIKGTPEVYTIAVNSCSRTGDWEF 832
            +PI+PD +T+GAL+KACANAGQV+RA +VY MI +Y+IKGT EVYTIAVN CS+  +W+F
Sbjct: 607  RPIEPDQITIGALMKACANAGQVDRALDVYRMIDKYDIKGTAEVYTIAVNCCSQNDNWDF 666

Query: 831  ACHVYSDMTRKGVAPDEMFFSALIDVAGHARKLDNAFDVLQKARDQGVHIGIISYSSLMG 652
            A  +Y DMTRKGV PDEMF SAL+DVAGHA KLD AFDVL++AR +G+++G +SYSSLMG
Sbjct: 667  ARSIYDDMTRKGVYPDEMFISALVDVAGHAGKLDAAFDVLEEARTKGINVGSMSYSSLMG 726

Query: 651  ACSNAKNWQKAVELYEDIKSIKLKPTVSTMNALITSLCDGEQLQKAVDVLSEMKRVGLCP 472
            ACSNAKNWQKA+ELYEDIK +KLKPTVS MNAL+T+LCD +Q QKA+++ SEMKRV LCP
Sbjct: 727  ACSNAKNWQKALELYEDIKGVKLKPTVSMMNALVTALCDADQYQKALEIFSEMKRVDLCP 786

Query: 471  NTITYSILFVASEKKDDLEVGMSLFSQAKRDGVAPNLVMCRCLIAMCLRRFEKACALGEP 292
            NTITYS L VASEKKDDL++G+ L S AK+DGV+PNLVMCRCL+AMCLRRF+KAC LGEP
Sbjct: 787  NTITYSTLLVASEKKDDLDIGLMLLSHAKKDGVSPNLVMCRCLLAMCLRRFQKACTLGEP 846

Query: 291  VLSFNSGHPQIDSKWTSLALMVYREAIVAGVVPTMEECSQVLGCLKLPYDASLRNRLTEN 112
            VLS+NSG  Q+DSKWTSLALM+YRE I AGVVPTM+E S VLGCL+LP DASL+ RL EN
Sbjct: 847  VLSYNSGRLQLDSKWTSLALMIYRETIAAGVVPTMDELSLVLGCLQLPRDASLKERLIEN 906

Query: 111  LQVSFVTSRSSNLFSLVDGFGEYDPR 34
            L ++  TS+ SNL SL+DGFGEYDPR
Sbjct: 907  LGLTVETSKGSNLCSLIDGFGEYDPR 932


>ref|XP_002534048.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223525928|gb|EEF28334.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1129

 Score =  924 bits (2388), Expect = 0.0
 Identities = 513/940 (54%), Positives = 628/940 (66%), Gaps = 33/940 (3%)
 Frame = -1

Query: 2754 LRPPG----VRYRRKCK-KLGFHIQSPRFLFRASFNSQXXXXXXXXXXXXXXXIFYL--- 2599
            LRPPG    +R R+  K K+    QS   L  ASF                    YL   
Sbjct: 41   LRPPGSASPLRGRKSKKIKIREKNQSQSLLINASFRLDSVLVVVAVSTFSALSFAYLHHH 100

Query: 2598 ----NYSKRKKVREMSGPSILALSERI-RCIMNQGNVDQTSVTEDLEWRMSVTESRNLMK 2434
                N  KRK  +E  G  +  L + I   I+    +D   + +     + V     +  
Sbjct: 101  FTNKNNKKRKTSKEDLGDGLSQLGKNIVNNIVRSPFLDVGHLHKVTSTTLEVKSKDLVDN 160

Query: 2433 GRETGHASENQL-------VQLQE--------ESVLMHEENLITNPLESHG----FDINA 2311
             RE  +  EN L       V+  E        E+ L +E +++    ES      F +++
Sbjct: 161  ARENSYVIENVLPNETSVLVESTESDKNSYVIENALSNETSVLVESTESDNNSADFTVSS 220

Query: 2310 YNATDSLSSRDSEVMGPSFPPSVLSESGTLQSVNFATEMPELEFEVCGQETELRSNMHKL 2131
               T  +S +         P  V+  S ++  + FA E+ EL  E    ETE+ S + +L
Sbjct: 221  NVCTYVVSKQSDNASVLLDPVPVIHGSESVLPLEFARELSELTIERSRDETEVDSELTQL 280

Query: 2130 MAREKLTVASAPMDTALKEVNEHNKSNPELGKESETISCVSNFKDSVREELYMFYEANRS 1951
            +  +    AS+ M             N E+GK+    S     K S RE+LY FYE ++S
Sbjct: 281  LEEKSNDTASSTM-------------NDEIGKKDGISSYYDITKKSAREDLYKFYEESQS 327

Query: 1950 ALKCLANLNGSNTLSSHASVRDSKTFSLIRCSTT-KGVESLAKEFLYTAENFKGKTPLGL 1774
              K  +NLNG +T+SSHA+       S ++ +   K  E L+ +    AE  + K  L  
Sbjct: 328  TEKSPSNLNGLDTVSSHAAPLIGNNISSLKVNGVGKEAELLSPQSPQFAETVERKVHLAR 387

Query: 1773 YKEGSPHERKDLGKSRGFSRDKGNRILPQNGHRNFPHSPHPNGKDVDDTHNLAHKSSAYN 1594
            Y+ G+  + + +G  RGF R+K    + Q+ H N P  P+PNG    +  + A +   YN
Sbjct: 388  YERGASRKNEHIGGRRGFPREKEKGHVIQDEHTNLPEFPYPNGVHSTNKDHKAEQVHGYN 447

Query: 1593 RFLRNGRLIDCVELLEDMERNGLLDMDKVYHAGFFKICKNQKAVKEAFRFIKLIPNPTLS 1414
            R LR+GRL +CV+LLEDMER GLLDM K+YHA FFKICK QKAVKEAFRF KL+PNP+LS
Sbjct: 448  RLLRDGRLAECVDLLEDMERRGLLDMSKIYHAKFFKICKIQKAVKEAFRFCKLVPNPSLS 507

Query: 1413 TFNMLMSVCAISQDSEGAFQVLHLVQEAGLKADCKLYTTLISTCAKTGKVDTMFKVFHEM 1234
            TFNMLMSVC+ SQDS+GAF+VL L Q AGLKADCKLYTTLISTCAK+GKVD MF+VFHEM
Sbjct: 508  TFNMLMSVCSSSQDSDGAFEVLRLAQGAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEM 567

Query: 1233 VNAEVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAV 1054
            VNA VEPNVHTYG+LIDGCAKAGQ+AKAFGAYGI+RSKNVKPDRVVFNALITACGQSGAV
Sbjct: 568  VNAGVEPNVHTYGSLIDGCAKAGQMAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAV 627

Query: 1053 DRAFDVLAEMRAEAQPIDPDHVTVGALIKACANAGQVERAREVYNMIHEYNIKGTPEVYT 874
            DRAFDVLAEM AE  PIDPDH+TVGAL+KACA AGQV+RA+EVYNM+H+YNIKGTPEVYT
Sbjct: 628  DRAFDVLAEMGAETHPIDPDHITVGALMKACAKAGQVDRAKEVYNMLHKYNIKGTPEVYT 687

Query: 873  IAVNSCSRTGDWEFACHVYSDMTRKGVAPDEMFFSALIDVAGHARKLDNAFDVLQKARDQ 694
            IAVN CS+TGDWEFA  VY DMTRKGVAPDEMF SAL+DVAGHA  +D AF+ LQ+AR Q
Sbjct: 688  IAVNFCSQTGDWEFARSVYDDMTRKGVAPDEMFLSALVDVAGHAGLVDIAFETLQEARTQ 747

Query: 693  GVHIGIISYSSLMGACSNAKNWQKAVELYEDIKSIKLKPTVSTMNALITSLCDGEQLQKA 514
            G  +GI+ YSSLMGACSNAKNWQKA+ELYEDIK+IKLKPTVSTMNAL+T+LCDG+QLQKA
Sbjct: 748  GTQLGIVPYSSLMGACSNAKNWQKALELYEDIKAIKLKPTVSTMNALMTALCDGDQLQKA 807

Query: 513  VDVLSEMKRVGLCPNTITYSILFVASEKKDDLEVGMSLFSQAKRDGVAPNLVMCRCLIAM 334
            ++ LSEMK  GLCPN +TYSIL VASE+KDDL+ G  L SQAK D + P  +M +C+I M
Sbjct: 808  LETLSEMKSFGLCPNIVTYSILLVASERKDDLDAGDMLLSQAKEDCITPTFLMYKCIIGM 867

Query: 333  CLRRFEKACALGEPVLSFNSGHPQIDSKWTSLALMVYREAIVAGVVPTMEECSQVLGCLK 154
            CLRR++KAC+LGE +LSF+SG PQI ++WTS AL VYRE I AG  PTME  SQVLGCL+
Sbjct: 868  CLRRYKKACSLGESILSFDSGRPQIKNEWTSRALTVYRETIAAGEKPTMEVVSQVLGCLQ 927

Query: 153  LPYDASLRNRLTENLQVSFVTSRSSNLFSLVDGFGEYDPR 34
            LP DASL+ RL ENL V+   S+ SNL +LVDGFGEYDPR
Sbjct: 928  LPCDASLKGRLVENLGVTADPSKFSNLCALVDGFGEYDPR 967


>ref|XP_012442077.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X3 [Gossypium raimondii]
          Length = 998

 Score =  921 bits (2381), Expect = 0.0
 Identities = 490/802 (61%), Positives = 591/802 (73%), Gaps = 3/802 (0%)
 Frame = -1

Query: 2430 RETGHASENQLVQLQEESVLMHEENLITNPLESHGFDINAYNATDSLSSRDSEVMGPSFP 2251
            +E   ASE++ V LQE +V+ + ++++T   ES+G D  A+NA DS    +S        
Sbjct: 51   KEVNDASESKEVLLQETAVV-NGDSMLTKASESNGADFLAFNANDSDVLEESGTTVLPLQ 109

Query: 2250 PSVLSESGTLQSVNFATEMPELEFEVCGQETELRSNMHKLMAREKLTVASAPMDTALKEV 2071
            P+VL ESG  Q   FAT+   L  E   +  E  ++  +L    K + +S  ++ A+  +
Sbjct: 110  PTVLLESGAGQPFTFATQRSGLHLEE--RVNEFEADYPRLAVEPKSSASSVLVEDAVVLI 167

Query: 2070 NEHNKSNPELGKESETISCVSNFKDSVREELYMFYEANRSALKCLANLNGSNTLSSHASV 1891
             E    N ++            F++S REEL+ FYEA+    K  +NL     +SSH   
Sbjct: 168  GEDKVRNYDI------------FRESGREELHTFYEADHLVAKSSSNLT-LKPVSSHFLS 214

Query: 1890 RDSKTFSLIRCSTTKGVES---LAKEFLYTAENFKGKTPLGLYKEGSPHERKDLGKSRGF 1720
             +S  FS ++      +      AK  L TA+  +GK     ++ G  H+RK LG+ R  
Sbjct: 215  SNSNKFSSLKLKLNSELNKDALSAKNSLQTADMVEGKVTQANFQGGFSHKRKHLGRGRES 274

Query: 1719 SRDKGNRILPQNGHRNFPHSPHPNGKDVDDTHNLAHKSSAYNRFLRNGRLIDCVELLEDM 1540
             RDKG + L Q         P PNG+  +D H+     S YN  LR GRL D V+LLEDM
Sbjct: 275  PRDKGKKHLIQEKDTKLAQFPFPNGELANDKHHPEEYLSYYNHLLRCGRLSDSVDLLEDM 334

Query: 1539 ERNGLLDMDKVYHAGFFKICKNQKAVKEAFRFIKLIPNPTLSTFNMLMSVCAISQDSEGA 1360
            E+ GLLDMDKVYHA FFKIC  QKAVKEAFRF KLI NPTLSTFNMLMSVC  S+DSEGA
Sbjct: 335  EQKGLLDMDKVYHAKFFKICSKQKAVKEAFRFTKLIANPTLSTFNMLMSVCGCSKDSEGA 394

Query: 1359 FQVLHLVQEAGLKADCKLYTTLISTCAKTGKVDTMFKVFHEMVNAEVEPNVHTYGALIDG 1180
            FQVL LVQEAG +ADC LYTTLISTCAK+GKVDTMF+VFHEMVN+ VEPNV+TYGALIDG
Sbjct: 395  FQVLRLVQEAGFQADCILYTTLISTCAKSGKVDTMFEVFHEMVNSGVEPNVNTYGALIDG 454

Query: 1179 CAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPID 1000
            CA+AGQV KAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM AE QPID
Sbjct: 455  CARAGQVPKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMMAETQPID 514

Query: 999  PDHVTVGALIKACANAGQVERAREVYNMIHEYNIKGTPEVYTIAVNSCSRTGDWEFACHV 820
            PDH+TVGALIKAC+NAGQVERAREVY M+H++NI+GTPEVYTIAVN CS+TGDWEFAC V
Sbjct: 515  PDHITVGALIKACSNAGQVERAREVYKMMHKFNIRGTPEVYTIAVNCCSQTGDWEFACGV 574

Query: 819  YSDMTRKGVAPDEMFFSALIDVAGHARKLDNAFDVLQKARDQGVHIGIISYSSLMGACSN 640
            Y+DM +KGVAPDE+F SALIDVAGHA KLD AF++LQ+A++ G++ GI+SYSSLMGACSN
Sbjct: 575  YNDMKKKGVAPDEVFISALIDVAGHAGKLDAAFELLQEAKNHGINSGIVSYSSLMGACSN 634

Query: 639  AKNWQKAVELYEDIKSIKLKPTVSTMNALITSLCDGEQLQKAVDVLSEMKRVGLCPNTIT 460
            A+NWQKA+ELYE+IK++KLK TVST+NALITSLC+  QL KA++VLSEM+  GL PN IT
Sbjct: 635  ARNWQKALELYENIKALKLKLTVSTVNALITSLCEANQLPKAMEVLSEMEESGLSPNIIT 694

Query: 459  YSILFVASEKKDDLEVGMSLFSQAKRDGVAPNLVMCRCLIAMCLRRFEKACALGEPVLSF 280
            YSIL VASE+  DLEVG+ L S+A+ DG+APNLVM RC+I MCLRRF KACA+GEPVLSF
Sbjct: 695  YSILLVASERNGDLEVGLMLLSKARDDGIAPNLVMSRCIIGMCLRRFVKACAVGEPVLSF 754

Query: 279  NSGHPQIDSKWTSLALMVYREAIVAGVVPTMEECSQVLGCLKLPYDASLRNRLTENLQVS 100
            NSG P I++KW S+AL VYRE I AG VPTME  S++LGCL+LP D SLR+RL ENL+V 
Sbjct: 755  NSGRPHIENKWMSVALTVYRETIDAGTVPTMEVVSKILGCLQLPRDDSLRSRLVENLEVI 814

Query: 99   FVTSRSSNLFSLVDGFGEYDPR 34
               SRSS+L SL+DGFGEYDPR
Sbjct: 815  ADPSRSSSLGSLIDGFGEYDPR 836


>ref|XP_009799357.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Nicotiana sylvestris]
          Length = 1095

 Score =  919 bits (2375), Expect = 0.0
 Identities = 515/939 (54%), Positives = 633/939 (67%), Gaps = 34/939 (3%)
 Frame = -1

Query: 2748 PPGVRYRRKCKKLGFHI--QSPRFLFRASFNSQXXXXXXXXXXXXXXXIFYLNYSKRK-K 2578
            P  +R RRKC+ +GF     S  F+ RAS +SQ               I +  +SKR   
Sbjct: 43   PVLLRSRRKCRNIGFQFGAHSSPFVLRASLDSQSVVVVAAVVTISALTIIFFEFSKRNAN 102

Query: 2577 VREMSGPSILALSERIRCIMNQGNVDQTSVTEDLEWRMSVTESRNLMKGRETGHASENQL 2398
            ++E+S    LAL  +IR +MN              W       R++             L
Sbjct: 103  LKEISAELTLALRRQIRHVMN--------------W-----FPRHVF-----------AL 132

Query: 2397 VQLQEESVL---MHEENLITNPLESHGFDINAYNA-------TDSLSSRDSEVMGPSFPP 2248
            + +QEE  +   M E + ++N LE  G D+    A       T+ + S D+  M  S   
Sbjct: 133  INIQEEKSVETSMTEVSKVSNELEDAGTDVQLGGAYLMQTVITNKIESADANQMASSSGG 192

Query: 2247 SVL---------SESGTLQSVNFATEMPELEFEVCGQETELRSNMHKLMAREKLTVASAP 2095
            S+          +ES  + S +F  E      +   Q T+  + +       + +V   P
Sbjct: 193  SLTLGAPGSNTHAESDVVPSSSFVAESLNNYLQEHLQGTKTSNRLTTEEVSSEHSVGLFP 252

Query: 2094 MDTALKEVNEHNKSNPELGKE----------SETISCVSN--FKDSVREELYMFYEANRS 1951
                 K + E  K++  L  +          +E    + N  F+DS R+ELY F+EA+  
Sbjct: 253  AINIDKGIEETKKTDHALMADGGLKIAHKHVAEDEVSIHNLIFRDSARKELYSFFEASTK 312

Query: 1950 ALKCLANLNGSNTLSSHASVRDSKTFSLIRCSTTKGVESLAKEFLYTAENFKGKTPLGLY 1771
                  +LNG   L+SHAS      F     S T  V S+       AE+FK K+P G Y
Sbjct: 313  ------SLNGQKALTSHASGERISVF-----SHTSKVSSI------QAEDFKEKSPHGCY 355

Query: 1770 KEGSPHERKDLGKSRGFSRDKGNRILPQNGHRNFPHSPHPNGKDVDDTHNLAHKSSAYNR 1591
            KEG P   KD GK +     K   IL  NG       P+P G  V D    + +  AY R
Sbjct: 356  KEG-PFNNKDFGKRKNHFTKKEKSILLDNGTTKQFQIPNPKGIQVCDGPQPSDQFRAYRR 414

Query: 1590 FLRNGRLIDCVELLEDMERNGLLDMDKVYHAGFFKICKNQKAVKEAFRFIKLIPNPTLST 1411
            FLR GRL+DC+E+L++MER+G L+MDKVYHAGFF+ CK+QKAVKEAFRF KLI NPTLST
Sbjct: 415  FLREGRLMDCIEMLDNMERHGSLNMDKVYHAGFFQACKSQKAVKEAFRFTKLIQNPTLST 474

Query: 1410 FNMLMSVCAISQDSEGAFQVLHLVQEAGLKADCKLYTTLISTCAKTGKVDTMFKVFHEMV 1231
            FNML+SVCA S+D EGAF+V+ LV+E GLK DCKLYTTLISTCAK+GKVDTMF+VFHEMV
Sbjct: 475  FNMLLSVCATSRDLEGAFRVVQLVRETGLKPDCKLYTTLISTCAKSGKVDTMFEVFHEMV 534

Query: 1230 NAEVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVD 1051
            NA VEPNV+TYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVD
Sbjct: 535  NAGVEPNVNTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVD 594

Query: 1050 RAFDVLAEMRAEAQPIDPDHVTVGALIKACANAGQVERAREVYNMIHEYNIKGTPEVYTI 871
            RAFDVL+EM+AEA+PI+PD +TVGAL+KACANAGQV+RA +VY MI +Y+IKGT EVYTI
Sbjct: 595  RAFDVLSEMKAEARPIEPDQITVGALMKACANAGQVDRALDVYRMIDKYDIKGTAEVYTI 654

Query: 870  AVNSCSRTGDWEFACHVYSDMTRKGVAPDEMFFSALIDVAGHARKLDNAFDVLQKARDQG 691
            AVN CS+ G+W+FA  +Y DMTRKGV PDEMF SAL+DVAGHA KLD AFDVL++AR +G
Sbjct: 655  AVNCCSQNGNWDFARSIYDDMTRKGVYPDEMFISALVDVAGHAGKLDAAFDVLEEARTKG 714

Query: 690  VHIGIISYSSLMGACSNAKNWQKAVELYEDIKSIKLKPTVSTMNALITSLCDGEQLQKAV 511
            +++G +SYSSLMGACSNAKNWQKA+ELYED+K +KLKPTVS MNAL+T+LCD +Q QKA+
Sbjct: 715  INVGSMSYSSLMGACSNAKNWQKALELYEDVKGVKLKPTVSMMNALVTALCDADQYQKAL 774

Query: 510  DVLSEMKRVGLCPNTITYSILFVASEKKDDLEVGMSLFSQAKRDGVAPNLVMCRCLIAMC 331
            ++ SEMKRV LCPNTITYS L VASEKKDDL++G+ L S AK+DGV+PNLVMCRCL+AMC
Sbjct: 775  EIFSEMKRVDLCPNTITYSTLLVASEKKDDLDIGLMLLSHAKKDGVSPNLVMCRCLLAMC 834

Query: 330  LRRFEKACALGEPVLSFNSGHPQIDSKWTSLALMVYREAIVAGVVPTMEECSQVLGCLKL 151
            LRRF+KAC LGEPVLS+NSG  Q+DSKWTSLALM+YRE I AGVVPTM+E S VLGCL+L
Sbjct: 835  LRRFQKACTLGEPVLSYNSGRLQLDSKWTSLALMIYRETIAAGVVPTMDELSLVLGCLQL 894

Query: 150  PYDASLRNRLTENLQVSFVTSRSSNLFSLVDGFGEYDPR 34
            P DASL+ RL ENL ++  TS+ SNL SL+DGFGEYD R
Sbjct: 895  PRDASLKERLIENLGLTVETSKGSNLCSLIDGFGEYDSR 933


>ref|XP_008236179.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic [Prunus mume]
          Length = 1065

 Score =  912 bits (2356), Expect = 0.0
 Identities = 484/792 (61%), Positives = 585/792 (73%), Gaps = 37/792 (4%)
 Frame = -1

Query: 2298 DSLSSRDSEVMGP----------SFPPSVLSESGTLQSVNFATEMPELE----------- 2182
            D+L+ +  E+  P          S  P V   +  LQ + F TE+ +L+           
Sbjct: 140  DALNGKIEEIETPVLQFHNSAQESLAPLVFESTAVLQPLRFPTELTQLQQPERSEDVDYD 199

Query: 2181 ------FEVCGQETE------LRSNMHKLMAREKLTVASAPMDTALKEVNEHNKSNPELG 2038
                   ++ G+ +E      +     KLM+     VAS  +    +E +E  +S+ E+G
Sbjct: 200  PISEEFSKLMGERSEDGGRDPISDEFSKLMSDSNFGVASPSVPVDDEENDEVGESD-EVG 258

Query: 2037 KESETISCVSNF----KDSVREELYMFYEANRSALKCLANLNGSNTLSSHASVRDSKTFS 1870
             ES+ +   ++F    ++SVREEL+MFYE+N+SA K +A+LNG             K  S
Sbjct: 259  -ESDEVGEATSFHVLNRESVREELHMFYESNKSATKSVASLNGK------------KPSS 305

Query: 1869 LIRCSTTKGVESLAKEFLYTAENFKGKTPLGLYKEGSPHERKDLGKSRGFSRDKGNRILP 1690
             +R  T  G + + +   +T E+ +G T          H RKDLGK  G+S DK  R LP
Sbjct: 306  FLRNITVTGADLIPQASHHTTESIEGHT----------HSRKDLGKGSGYSSDKEVRHLP 355

Query: 1689 QNGHRNFPHSPHPNGKDVDDTHNLAHKSSAYNRFLRNGRLIDCVELLEDMERNGLLDMDK 1510
            +         PHP+G   +D   L+ + SAY+R L++GRL D ++LLEDMER GLLDM+K
Sbjct: 356  KKNSGTMTQFPHPHGIHTNDRDLLSEQLSAYHRLLKDGRLGDSLKLLEDMERRGLLDMNK 415

Query: 1509 VYHAGFFKICKNQKAVKEAFRFIKLIPNPTLSTFNMLMSVCAISQDSEGAFQVLHLVQEA 1330
            VYHA FF+ICK+QKAV +AFRFIKLIPNPTLST+NMLM+VCA SQDSE AF VL LV+EA
Sbjct: 416  VYHARFFEICKSQKAVDKAFRFIKLIPNPTLSTYNMLMTVCASSQDSEEAFHVLRLVREA 475

Query: 1329 GLKADCKLYTTLISTCAKTGKVDTMFKVFHEMVNAEVEPNVHTYGALIDGCAKAGQVAKA 1150
            G+K DCKLYTTLISTC K+GKV TMF VFHEMVNA VEPNVHTYGALIDGC +AG+VAKA
Sbjct: 476  GMKPDCKLYTTLISTCGKSGKVYTMFDVFHEMVNAGVEPNVHTYGALIDGCGRAGEVAKA 535

Query: 1149 FGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHVTVGALI 970
            FGAYGIMRSK VKPDRVVFNALITACGQSGAVDRAFDVL EM AE QPI+PDH T+GALI
Sbjct: 536  FGAYGIMRSKKVKPDRVVFNALITACGQSGAVDRAFDVLGEMMAETQPIEPDHTTIGALI 595

Query: 969  KACANAGQVERAREVYNMIHEYNIKGTPEVYTIAVNSCSRTGDWEFACHVYSDMTRKGVA 790
            KACANAGQV+RAREVY M+H+Y IKG+ EVYTIAVN CS+TGDWEFAC+VYSDMTRKGV 
Sbjct: 596  KACANAGQVDRAREVYKMVHKYKIKGSSEVYTIAVNCCSQTGDWEFACNVYSDMTRKGVV 655

Query: 789  PDEMFFSALIDVAGHARKLDNAFDVLQKARDQGVHIGIISYSSLMGACSNAKNWQKAVEL 610
            PDEMF SALIDVAGHA KLD AF++LQ+AR+QG+ +G +SYSSLMGACSNAKNWQKA+EL
Sbjct: 656  PDEMFLSALIDVAGHAGKLDAAFEILQEARNQGIQLGTVSYSSLMGACSNAKNWQKALEL 715

Query: 609  YEDIKSIKLKPTVSTMNALITSLCDGEQLQKAVDVLSEMKRVGLCPNTITYSILFVASEK 430
            YE +KS K++ TVST+NALIT+LCDG+QLQKA++VLSEMK  GL PN+ITYSI+ VASEK
Sbjct: 716  YEYLKSTKIEKTVSTVNALITALCDGDQLQKAMEVLSEMKGFGLHPNSITYSIILVASEK 775

Query: 429  KDDLEVGMSLFSQAKRDGVAPNLVMCRCLIAMCLRRFEKACALGEPVLSFNSGHPQIDSK 250
            KDDLE G  L SQA++DGVAPNLVMCRC+I MCLRR EKAC+LGEPVLS     PQ+DSK
Sbjct: 776  KDDLEAGHMLLSQAEKDGVAPNLVMCRCIIGMCLRRSEKACSLGEPVLS--RDRPQVDSK 833

Query: 249  WTSLALMVYREAIVAGVVPTMEECSQVLGCLKLPYDASLRNRLTENLQVSFVTSRSSNLF 70
            W S+ALMVYR+ IVAG++PT+E  SQVLGCL+LPYDAS +NRL ENL V+  TSR SNL 
Sbjct: 834  WASMALMVYRKTIVAGIMPTVEVISQVLGCLQLPYDASFKNRLIENLGVTADTSRPSNLC 893

Query: 69   SLVDGFGEYDPR 34
            SL+DGFGEYDPR
Sbjct: 894  SLIDGFGEYDPR 905