BLASTX nr result
ID: Cornus23_contig00003111
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cornus23_contig00003111 (5634 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 2948 0.0 ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su... 2913 0.0 ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su... 2872 0.0 ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su... 2871 0.0 ref|XP_011099129.1| PREDICTED: DNA-directed RNA polymerase II su... 2859 0.0 gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial... 2859 0.0 ref|XP_008448514.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 2850 0.0 ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II su... 2849 0.0 ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II su... 2849 0.0 ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prun... 2849 0.0 ref|XP_008242006.1| PREDICTED: DNA-directed RNA polymerase II su... 2846 0.0 ref|XP_009344822.1| PREDICTED: DNA-directed RNA polymerase II su... 2842 0.0 ref|XP_010029631.1| PREDICTED: DNA-directed RNA polymerase II su... 2838 0.0 ref|XP_009337078.1| PREDICTED: DNA-directed RNA polymerase II su... 2838 0.0 ref|XP_009363439.1| PREDICTED: DNA-directed RNA polymerase II su... 2838 0.0 ref|XP_008337428.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 2835 0.0 ref|XP_006828844.1| PREDICTED: DNA-directed RNA polymerase II su... 2834 0.0 ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II su... 2833 0.0 gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium r... 2833 0.0 ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II su... 2833 0.0 >ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera] Length = 1848 Score = 2948 bits (7642), Expect = 0.0 Identities = 1459/1535 (95%), Positives = 1498/1535 (97%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MDMRFP+SPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKILADEEDHK Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXEPVKKSRGGCGAQQPKLGI 4778 FKQAQKIRNPKNRLKKILDACK+K+KC EPVKKSRGGCGAQQPKL I Sbjct: 121 FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180 Query: 4777 EGMKINAEYKIQKKKSDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPKYAR 4598 EGMK+ AEYKIQ+KK+DDPEQLPEPVERKQQLSAERVLNVLKRISDEDC LLGLNPKYAR Sbjct: 181 EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYAR 240 Query: 4597 PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4418 PDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300 Query: 4417 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4238 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 4237 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4058 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 4057 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYST 3878 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 3877 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIVQDT 3698 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 3697 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3518 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600 Query: 3517 LMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3338 L+RTSAWHSE+E+G ITPGDTQVRIEKGE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660 Query: 3337 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQDKKL 3158 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIR AQ+++L Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720 Query: 3157 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2978 EAEPGRTMM+SFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2977 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2798 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2797 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2618 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+QK Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900 Query: 2617 LDSLKMKKSDFDKFFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2438 LDSLKMKK +FD+ F+YEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADR+Q Sbjct: 901 LDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQ 960 Query: 2437 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 2258 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP Sbjct: 961 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020 Query: 2257 GDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLVAPG 2078 GDDL+SMEAQKNATLFFNILLRSTFASKRVL EYRLTREAFEWVIGEIESRFLQSLVAPG Sbjct: 1021 GDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 2077 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1898 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140 Query: 1897 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 1718 P+V KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE+ Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200 Query: 1717 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1538 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 1537 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEGFKP 1358 NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFD+ EGFKP Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320 Query: 1357 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1178 E EWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380 Query: 1177 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 998 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD+ Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDF 1440 Query: 997 LRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMDGLEFGMTPSRSPITGTP 818 LRGVTENIMLGQLAPIGTGDCALYLN++MLQ AI++QLPSYM+GL+FGMTPSRSPITGTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDQMLQHAIELQLPSYMEGLDFGMTPSRSPITGTP 1500 Query: 817 YHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 YHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGM F Sbjct: 1501 YHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMAF 1535 >ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo nucifera] Length = 1848 Score = 2913 bits (7552), Expect = 0.0 Identities = 1441/1535 (93%), Positives = 1488/1535 (96%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MD RFP+SPAEV+KVR VQFGILSPD IRQMSVVQIEHSETTE+GKPKPGGLSD RLGTI Sbjct: 1 MDTRFPYSPAEVSKVRRVQFGILSPDVIRQMSVVQIEHSETTEKGKPKPGGLSDTRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKILADEEDHK Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXEPVKKSRGGCGAQQPKLGI 4778 FKQAQ+IRNPKNRLKK+LDACK+KTKC EP+KK RGGCGAQQPKL I Sbjct: 121 FKQAQRIRNPKNRLKKVLDACKNKTKCEGGDEIEVQGQDTGEPIKKRRGGCGAQQPKLTI 180 Query: 4777 EGMKINAEYKIQKKKSDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPKYAR 4598 EGMK+ AEYK Q+KK+DD EQLPEPVERKQQLSAERVL+VLKRISDEDC LLGLNP+YAR Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCILLGLNPEYAR 240 Query: 4597 PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4418 PDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300 Query: 4417 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4238 EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 4237 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4058 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 4057 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYST 3878 EDGQRLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 3877 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIVQDT 3698 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 3697 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3518 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600 Query: 3517 LMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3338 LMRTSAWHSE+E+G ITPGDTQVRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LMRTSAWHSESETGFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660 Query: 3337 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQDKKL 3158 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIR AQ+++L Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720 Query: 3157 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2978 EAEPGRTMM+SFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2977 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2798 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2797 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2618 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+QK Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900 Query: 2617 LDSLKMKKSDFDKFFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2438 LDSLKM+KS+FDK FRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ Sbjct: 901 LDSLKMRKSEFDKVFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 960 Query: 2437 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 2258 LGTEIATTGDN+WPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP Sbjct: 961 LGTEIATTGDNNWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020 Query: 2257 GDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLVAPG 2078 GDD +SMEAQKNATLFFNILLRSTFASKRVL EYRLTREAFEWVIGEIESRFLQSLVAPG Sbjct: 1021 GDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 2077 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1898 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140 Query: 1897 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 1718 PEV KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE+ Sbjct: 1141 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200 Query: 1717 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1538 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 1537 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEGFKP 1358 NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFD+ EGFKP Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320 Query: 1357 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1178 E EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVRR+LLDELRVVISFDG Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDG 1380 Query: 1177 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 998 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDC 1440 Query: 997 LRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMDGLEFGMTPSRSPITGTP 818 LRGVTENIMLGQLAPIGTGDCALYLN++MLQQAI++QLPSYM+GL+FGMTPSRSPI GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPIMGTP 1500 Query: 817 YHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 Y++GMMSP+YLLSPN RLSPITDAQFSPYVGGM F Sbjct: 1501 YNEGMMSPSYLLSPNARLSPITDAQFSPYVGGMAF 1535 >ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix dactylifera] Length = 1842 Score = 2872 bits (7445), Expect = 0.0 Identities = 1421/1536 (92%), Positives = 1478/1536 (96%), Gaps = 1/1536 (0%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MDMRFP+SPAEVAKVR VQFGILSPDEIRQMSVVQIEH ET ERGKPKPGGLSDPRLGTI Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVL+IMRCVCFNCSKILADE+D + Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXE-PVKKSRGGCGAQQPKLG 4781 FKQA KIRNPK+RLK+I DACK+K KC E P+KKSRGGCGAQQP + Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180 Query: 4780 IEGMKINAEYKIQKKKSDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPKYA 4601 I+GMK+ AEYK KKKSDD EQLPEPVERKQ LSAERVL+VLKRISDEDC LLGL+PKYA Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLDPKYA 240 Query: 4600 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4421 RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300 Query: 4420 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4241 +EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA Sbjct: 301 TEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360 Query: 4240 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4061 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420 Query: 4060 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 3881 REDGQRLDLRYLKKSSDHHLELGYKVERHL DGDYVLFNRQPSLHKMSIMGHRIKIMPYS Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480 Query: 3880 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIVQD 3701 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQD Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540 Query: 3700 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3521 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600 Query: 3520 NLMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGPDA 3341 NL+RTSAWHSE E+G ITPGDT VRIEKGE++SGTLCK+TLGTSTGSLIHVIWEEVGPDA Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKRTLGTSTGSLIHVIWEEVGPDA 660 Query: 3340 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQDKK 3161 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKN+VKELI+ AQ+K+ Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720 Query: 3160 LEAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2981 LEAEPGRTMM+SFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780 Query: 2980 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2801 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840 Query: 2800 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ 2621 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900 Query: 2620 KLDSLKMKKSDFDKFFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 2441 KLDSLKMKKS+FDK F+YEIDD+NWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY Sbjct: 901 KLDSLKMKKSEFDKGFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960 Query: 2440 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2261 QLGTEIATTGDN+WP+PVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV Sbjct: 961 QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020 Query: 2260 PGDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLVAP 2081 PGDD +SMEAQKNATLFFNILLRSTFASKRVL EYRLTREAFEWVIGEIESRFLQSLVAP Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080 Query: 2080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFL 1901 GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+L Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140 Query: 1900 KPEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 1721 KPEV K KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTIIEEDV+FVKSYYEMPDE+ Sbjct: 1141 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200 Query: 1720 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1541 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNA+KLILRIRI Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260 Query: 1540 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEGFK 1361 MNDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVN+FDD+EGFK Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDDNEGFK 1320 Query: 1360 PENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1181 + EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380 Query: 1180 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1001 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1440 Query: 1000 YLRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMDGLEFGMTPSRSPITGT 821 YLRGVTENIMLGQLAPIGTGDCALYLN++MLQQAI++QLPSYM+GL+FGMTPSRSPI+GT Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1500 Query: 820 PYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 PYH+GMMSP+YLLSPN+R SPITDAQFSPYVGGM F Sbjct: 1501 PYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMAF 1536 >ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis guineensis] Length = 1842 Score = 2871 bits (7443), Expect = 0.0 Identities = 1421/1536 (92%), Positives = 1479/1536 (96%), Gaps = 1/1536 (0%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MDMRFP+SPAEVAKVR VQFGILSPDEIRQMSVVQIEHSET ERGKPKPGGLSDPRLGTI Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVL+IMRCVCFNCSKILADE+D + Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXE-PVKKSRGGCGAQQPKLG 4781 FKQA KIRNPK+RLK+I DACK+K KC E P+KKSRGGCGAQQP + Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180 Query: 4780 IEGMKINAEYKIQKKKSDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPKYA 4601 I+GMK+ AEYK KKKSDD EQLPEPVERKQ LSAERVL+VLKRISDEDC LLGL+PKYA Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLSPKYA 240 Query: 4600 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4421 RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300 Query: 4420 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4241 +EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360 Query: 4240 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4061 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420 Query: 4060 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 3881 REDGQRLDLRYLKKSSDHHLELGYKVERHL DGDYVLFNRQPSLHKMSIMGHRIKIMPYS Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480 Query: 3880 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIVQD 3701 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQD Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540 Query: 3700 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3521 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600 Query: 3520 NLMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGPDA 3341 NL+RTSAWHSE E+G ITPGDT VRIEKGE++SGTLCKKTLGTSTGSLIHVIWEEVGPDA Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660 Query: 3340 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQDKK 3161 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKN+VKELI+ AQ+K+ Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720 Query: 3160 LEAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2981 LEAEPGRTMM+SFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780 Query: 2980 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2801 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840 Query: 2800 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ 2621 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900 Query: 2620 KLDSLKMKKSDFDKFFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 2441 KLDSLKMKKSDFD+ F+YEIDD+NWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY Sbjct: 901 KLDSLKMKKSDFDRVFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960 Query: 2440 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2261 QLGTEIATTGDN+WP+PVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV Sbjct: 961 QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020 Query: 2260 PGDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLVAP 2081 PGDD +SMEAQKNATLFFNILLRSTFASKRVL EYRLTREAFEWVIGEIESRFLQSLVAP Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080 Query: 2080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFL 1901 GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+L Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140 Query: 1900 KPEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 1721 KPEV K KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTIIEEDV+FVKSYYEMPDE+ Sbjct: 1141 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200 Query: 1720 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1541 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNA+KLILRIRI Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260 Query: 1540 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEGFK 1361 MNDEAPKGEL DESAEDDVFLK+IESNMLTEMALRGIPDINKVFIKSGKVN+FD++EGFK Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKRIESNMLTEMALRGIPDINKVFIKSGKVNRFDENEGFK 1320 Query: 1360 PENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1181 + EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380 Query: 1180 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1001 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD 1440 Query: 1000 YLRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMDGLEFGMTPSRSPITGT 821 +LRGVTENIMLGQLAPIGTGDCALYLN++MLQQAI++QLPSYM+GLEFGMTPSRSPI+GT Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLEFGMTPSRSPISGT 1500 Query: 820 PYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 PYH+GMMSP+YLLSPN+R SPITDAQFSPYVGGM F Sbjct: 1501 PYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMTF 1536 >ref|XP_011099129.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Sesamum indicum] Length = 1848 Score = 2859 bits (7412), Expect = 0.0 Identities = 1410/1537 (91%), Positives = 1480/1537 (96%), Gaps = 2/1537 (0%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MD+RFP+SPAEVAK+R+VQFGILSPDEIRQMSVV IEHSETTERGKPKPGGLSDPRLGTI Sbjct: 1 MDLRFPYSPAEVAKIRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDPRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRKMKCETCMANMA+CPGHFGHLELAKPMFHIGF+KTVLSI+RCVCFNCSKILADEED K Sbjct: 61 DRKMKCETCMANMADCPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEEDPK 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXEPVKKSRGGCGAQQPKLGI 4778 FKQA +IRNPKNRLKKILDACK+K+KC EPVKK+RGGCGAQQPK+ I Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTDEPVKKTRGGCGAQQPKISI 180 Query: 4777 EGMKINAEYKIQKKKSDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPKYAR 4598 +GMK+ AEYKIQKKK+DDPEQ+PEPVERKQQLSAE+VL++LKRI+DEDC LLGLNPKYAR Sbjct: 181 DGMKMVAEYKIQKKKNDDPEQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKYAR 240 Query: 4597 PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4418 PDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300 Query: 4417 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4238 EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 4237 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4058 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 4057 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYST 3878 +DGQRLDLRYLKKSSD HLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGH+IKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHKIKIMPYST 480 Query: 3877 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIVQDT 3698 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 3697 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3518 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600 Query: 3517 LMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3338 L+R SAWH E+E G ITPGDTQVRIEKGE++SGTLCKKTLGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LLRYSAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660 Query: 3337 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQDKKL 3158 RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKNEVKELIR AQ+K+L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 720 Query: 3157 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2978 EAEPGRTMM+SFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2977 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2798 ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2797 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2618 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 900 Query: 2617 LDSLKMKKSDFDKFFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2438 L+SLK+KK+DF+ +RYEID+ NWNP+YMLPE VEDLKTIRE R+VFDAEVQKLEADRYQ Sbjct: 901 LESLKLKKADFNDMYRYEIDNANWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQ 960 Query: 2437 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 2258 LGTEIATTGDNSWP+PVN++RL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERLKVV Sbjct: 961 LGTEIATTGDNSWPLPVNIRRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020 Query: 2257 GDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLVAPG 2078 GDD +SMEAQKNATLFFNILLRS ASKRVL EYRLTREAFEWVIGEIESRFLQSLVAPG Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 2077 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1898 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140 Query: 1897 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 1718 P+V KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDV+FVKSYYEMPDEEI Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200 Query: 1717 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1538 P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 1537 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEGFKP 1358 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFD++EGFK Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1320 Query: 1357 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1178 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG Sbjct: 1321 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1380 Query: 1177 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 998 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD+ Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440 Query: 997 LRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMD--GLEFGMTPSRSPITG 824 LRGVTENIMLGQLAPIGTGDCALYLNE+ML+QAI+I LPSYM+ GLEFGMTP+RSP+TG Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEIPLPSYMEGGGLEFGMTPARSPLTG 1500 Query: 823 TPYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 TPYHDGMMSP+YLLSPNLRLSP+TDAQFSPYVGGM F Sbjct: 1501 TPYHDGMMSPSYLLSPNLRLSPVTDAQFSPYVGGMAF 1537 >gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera] Length = 1705 Score = 2859 bits (7411), Expect = 0.0 Identities = 1415/1536 (92%), Positives = 1474/1536 (95%), Gaps = 1/1536 (0%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MD RFP+SPAEVAKVR VQFGILSPDEIRQMSVVQIEHSET ERGKPKPGGLSDPRLGTI Sbjct: 1 MDTRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVL+IMRCVCFNCSKILADE+D + Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXE-PVKKSRGGCGAQQPKLG 4781 FKQA KIRNPK+RLK+I DACK+K KC E P+KKSRGGCGAQQP + Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPMKKSRGGCGAQQPNIT 180 Query: 4780 IEGMKINAEYKIQKKKSDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPKYA 4601 I+GMK+ AEYK KKKSDD EQLPEPVERKQ LSAERVL+VLKRISDEDC LLGLNPKYA Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLNPKYA 240 Query: 4600 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4421 RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII Sbjct: 241 RPDWMILQVLPIPLPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300 Query: 4420 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4241 +EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360 Query: 4240 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4061 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420 Query: 4060 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 3881 REDGQRLDLRYLKKSSDHHLELGYKVERHL DGDYVLFNRQPSLHKMSIMGHRIKIMPYS Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480 Query: 3880 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIVQD 3701 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQD Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540 Query: 3700 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3521 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600 Query: 3520 NLMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGPDA 3341 NL+RTSAWHSE E+G ITPGDT VRIEKG ++SGTLCK+TLGTSTGSLIHVIWEEVGPDA Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGXLLSGTLCKRTLGTSTGSLIHVIWEEVGPDA 660 Query: 3340 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQDKK 3161 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKN+VKELI+ AQ+K+ Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720 Query: 3160 LEAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2981 LEAEPGRTMM+SFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780 Query: 2980 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2801 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840 Query: 2800 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ 2621 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900 Query: 2620 KLDSLKMKKSDFDKFFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 2441 KLDSLKMKKS+FDKFF+YEIDD+NWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY Sbjct: 901 KLDSLKMKKSEFDKFFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960 Query: 2440 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2261 QLGTEIATTGDN+WP+PVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV Sbjct: 961 QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020 Query: 2260 PGDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLVAP 2081 PGDD +SMEAQKNATLFFNILLRSTFASKRVL EYRLTREAFEWVIGEIESRFLQSLVAP Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080 Query: 2080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFL 1901 GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+L Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140 Query: 1900 KPEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 1721 K EV K KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTIIEEDV+FVKSYYEMPDE+ Sbjct: 1141 KSEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200 Query: 1720 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1541 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNA+KLILRIRI Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260 Query: 1540 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEGFK 1361 MNDE PKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVN+FD+++GFK Sbjct: 1261 MNDEGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDENDGFK 1320 Query: 1360 PENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1181 + EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380 Query: 1180 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1001 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVD LLDAAV+AETD Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDXLLDAAVFAETD 1440 Query: 1000 YLRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMDGLEFGMTPSRSPITGT 821 +LRGVTENIMLGQLAPIGTGDCALYLN++MLQ AI++QLPSYM+GL+FGMTPSRSPI+GT Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQXAIELQLPSYMEGLDFGMTPSRSPISGT 1500 Query: 820 PYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 PYH+GMMSP+YLLSPN+R SPITDAQFSPYVGGM F Sbjct: 1501 PYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMTF 1536 >ref|XP_008448514.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit 1 [Cucumis melo] Length = 1837 Score = 2850 bits (7387), Expect = 0.0 Identities = 1404/1535 (91%), Positives = 1470/1535 (95%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MD+RFP+SPAEVAKVRMVQFGILSPDEIRQMSVVQIEH ETTERGKPK GLSDPRLGTI Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVL+IMR VCFNCSKIL DEED K Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXEPVKKSRGGCGAQQPKLGI 4778 FKQA +I+NPKNRL+KILDACK+KTKC +PVKKSRGGCGAQQPK+ I Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKITI 180 Query: 4777 EGMKINAEYKIQKKKSDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPKYAR 4598 EGMK+ AEYK Q+KK+DD EQLPEPVERKQ L+AERVL +LKRI+D+DC LLGLNPKYAR Sbjct: 181 EGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGILKRITDDDCKLLGLNPKYAR 240 Query: 4597 PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4418 PDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNG+PAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300 Query: 4417 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4238 EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 4237 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4058 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 4057 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYST 3878 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 3877 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIVQDT 3698 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 3697 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3518 LLGCRKITKRDTFI KDVFMNILMWWEDFDGKIPAPAILKP+PLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600 Query: 3517 LMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3338 L RTSAWHSE+E+GH+TPGDT VRIEKGE++SGTLCKK LGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660 Query: 3337 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQDKKL 3158 RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKNEVK LI+ AQ++ L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720 Query: 3157 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2978 E EPGRTMMDSFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2977 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2798 ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2797 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2618 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900 Query: 2617 LDSLKMKKSDFDKFFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2438 LDSLKMKK +F++ FRYE +DENW P+YMLPEHVEDLKTIREFRNVF+AEVQKLEADRYQ Sbjct: 901 LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960 Query: 2437 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 2258 LGTEIATTG+NSWPMPVNLKRLI NAQKTFK+D RR SDMHPMEIVEA+DKLQERLKVVP Sbjct: 961 LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020 Query: 2257 GDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLVAPG 2078 G+D +S+EAQKNATLFFNILLRSTFASKRVL+EYRLTREAFEWVIGEIESRFLQSLVAPG Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 2077 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1898 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSV+LK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140 Query: 1897 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 1718 PE KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTIIEED+DFVKSYYEMPDEEI Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200 Query: 1717 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1538 APEKISPWLLRIELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 1537 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEGFKP 1358 NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKFD++EGFKP Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320 Query: 1357 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1178 E EWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG Sbjct: 1321 EMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380 Query: 1177 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 998 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD+ Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440 Query: 997 LRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMDGLEFGMTPSRSPITGTP 818 LRGVTENIMLGQLAPIGTG CALYLN++ML+ AI++QLPSY+DGL+FGMTPSRSPI+GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500 Query: 817 YHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 YH+GMMSPNYLLSPNLRLSPI+DAQFSPYVGGM F Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535 >ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Cucumis sativus] gi|778674691|ref|XP_011650276.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Cucumis sativus] gi|700200498|gb|KGN55631.1| hypothetical protein Csa_3G002510 [Cucumis sativus] Length = 1867 Score = 2849 bits (7386), Expect = 0.0 Identities = 1405/1535 (91%), Positives = 1469/1535 (95%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MD+RFP+SPAEVAKVRMVQFGILSPDEIRQMSVVQIEH ETTERGKPK GLSDPRLGTI Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVL+IMR VCFNCSKIL DEED K Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXEPVKKSRGGCGAQQPKLGI 4778 FKQA +I+NPKNRL+KILDACK+KTKC +PVKKSRGGCGAQQPK+ I Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180 Query: 4777 EGMKINAEYKIQKKKSDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPKYAR 4598 EGMK+ AEYK Q+KK+DDPEQLPEPVERKQ L+AERVL +LKRI+DEDC LLGLNPKYAR Sbjct: 181 EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240 Query: 4597 PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4418 PDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNG+PAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300 Query: 4417 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4238 EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 4237 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4058 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 4057 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYST 3878 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 3877 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIVQDT 3698 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 3697 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3518 LLGCRKITKRDTFI KDVFMN LMWWEDFDGKIPAPAILKP+PLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600 Query: 3517 LMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3338 L RTSAWHSE+E+GHITPGDT VRIEKGE++SGTLCKK LGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660 Query: 3337 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQDKKL 3158 RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKNEVK LI+ AQ++ L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720 Query: 3157 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2978 E EPGRTMMDSFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2977 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2798 ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2797 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2618 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900 Query: 2617 LDSLKMKKSDFDKFFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2438 LDSLKMKK +F++ FRYE +DENW P+YMLPEHVEDLKTIREFRNVF+AEVQKLEADRYQ Sbjct: 901 LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960 Query: 2437 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 2258 LGTEIATTG+NSWPMPVNLKRLI NAQKTFK+D RR SDMHPMEIVEA+DKLQERLKVVP Sbjct: 961 LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020 Query: 2257 GDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLVAPG 2078 G+D +S+EAQKNATLFFNILLRSTFASKRVL+EYRLTREAFEWVIGEIESRFLQSLVAPG Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 2077 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1898 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSV+LK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140 Query: 1897 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 1718 PE KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTIIEED+DFVKSYYEMPDEEI Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200 Query: 1717 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1538 APEKISPWLLRIELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 1537 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEGFKP 1358 NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKFD++EGFKP Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320 Query: 1357 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1178 E EWMLDTEGVNLLAVM HEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG Sbjct: 1321 EMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380 Query: 1177 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 998 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD+ Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440 Query: 997 LRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMDGLEFGMTPSRSPITGTP 818 LRGVTENIMLGQLAPIGTG CALYLN++ML+ AI++QLPSY+DGL+FGMTPSRSPI+GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500 Query: 817 YHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 YH+GMMSPNYLLSPNLRLSPI+DAQFSPYVGGM F Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535 >ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis guineensis] Length = 1842 Score = 2849 bits (7385), Expect = 0.0 Identities = 1408/1536 (91%), Positives = 1470/1536 (95%), Gaps = 1/1536 (0%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MD+RFP+SPAEVAKVR VQFGILSPDEIRQMSV QIEH ET ERGKPKPGGLSDPRLGTI Sbjct: 1 MDVRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVL+IMRCVCFNCSKILADE+D + Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXE-PVKKSRGGCGAQQPKLG 4781 FKQA KIRNPK+RLK+I DACKSK KC E P+KKSRGGCG+QQP + Sbjct: 121 FKQALKIRNPKHRLKRISDACKSKKKCAGGDDVDIQAQQDSEEPIKKSRGGCGSQQPTIT 180 Query: 4780 IEGMKINAEYKIQKKKSDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPKYA 4601 I+GMK+ AEYK KKKSDD +QLPEPVERKQ LSA+RVL+VLKRISDEDC LLGLNP+YA Sbjct: 181 IDGMKMVAEYKAPKKKSDDQDQLPEPVERKQILSADRVLSVLKRISDEDCILLGLNPQYA 240 Query: 4600 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4421 RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300 Query: 4420 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4241 +EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360 Query: 4240 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4061 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420 Query: 4060 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 3881 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRIKIMPYS Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 480 Query: 3880 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIVQD 3701 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQD Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540 Query: 3700 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3521 TLLGCRKITKRDTFIE DVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI Sbjct: 541 TLLGCRKITKRDTFIEMDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600 Query: 3520 NLMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGPDA 3341 NL+RTSAWHSE E+G ITPGDT VRIEKGE++SGTLCKKTLGTSTGSLIHVIWEEVGPDA Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660 Query: 3340 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQDKK 3161 ARKFLGHTQWLVNYWLLQNGFS+GIGDTIADA TMEKINETISKAKN+VKELI+ AQ+K+ Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSMGIGDTIADAVTMEKINETISKAKNDVKELIKLAQEKQ 720 Query: 3160 LEAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2981 LEAEPGRTMM+SFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780 Query: 2980 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2801 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840 Query: 2800 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ 2621 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900 Query: 2620 KLDSLKMKKSDFDKFFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 2441 KLDSLKMKKS+FDK FRYEIDD NWNPSYMLPEHVEDLKTIREF+NVFDAEVQKLEADRY Sbjct: 901 KLDSLKMKKSEFDKIFRYEIDDNNWNPSYMLPEHVEDLKTIREFKNVFDAEVQKLEADRY 960 Query: 2440 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2261 QLGTEI TTGDN+WPMPVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV Sbjct: 961 QLGTEIVTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020 Query: 2260 PGDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLVAP 2081 PGDD +SMEAQKNATLFFNILLRSTFASKRVL EYRLTREAFEWVIGEIESRFLQSLVAP Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080 Query: 2080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFL 1901 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+L Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140 Query: 1900 KPEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 1721 KPEV K KE AKNVQ ALEYTTLRSVT ATEVWYDPDPMSTIIEEDV+FVKSYYEMPDE+ Sbjct: 1141 KPEVNKKKELAKNVQTALEYTTLRSVTHATEVWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200 Query: 1720 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1541 IAPEKISPWLLR+ELNREMMVDKKLSMADIAEKIN EF D+TCIFNDDNA+KLILRIRI Sbjct: 1201 IAPEKISPWLLRVELNREMMVDKKLSMADIAEKINHEFGSDITCIFNDDNADKLILRIRI 1260 Query: 1540 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEGFK 1361 MNDEAPKG+L DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVN+FD+ EGFK Sbjct: 1261 MNDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDETEGFK 1320 Query: 1360 PENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1181 + EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVRR+LLDELRVVISFD Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1380 Query: 1180 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1001 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVY+E D Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYSEAD 1440 Query: 1000 YLRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMDGLEFGMTPSRSPITGT 821 +LRGVTENIMLGQLAPIGTGDCALYLN++MLQQAI++QLPSYM+GL+FGMTPSRSPI+GT Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1500 Query: 820 PYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 PYH+GMMSP+YLLSPN+R SPITDAQFSPYVGGM F Sbjct: 1501 PYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMAF 1536 >ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica] gi|462398589|gb|EMJ04257.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica] Length = 1844 Score = 2849 bits (7385), Expect = 0.0 Identities = 1407/1535 (91%), Positives = 1466/1535 (95%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MD+RFPFSPAEVAKVR VQFGILSPDEIRQMSVVQIEHSET GKPK GLSDPRLGTI Sbjct: 1 MDIRFPFSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKIL DE+DHK Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXEPVKKSRGGCGAQQPKLGI 4778 FKQA +I++PKNRLKKILDACK+KTKC EPVKKSRGGCGAQQPKL I Sbjct: 121 FKQALRIKSPKNRLKKILDACKNKTKCDGGDEIDVQGQESEEPVKKSRGGCGAQQPKLSI 180 Query: 4777 EGMKINAEYKIQKKKSDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPKYAR 4598 EGMK+NAEYK Q+KKSDD EQLPEPVERKQ L+AERVL+VLKRISDED LLGLNPKYAR Sbjct: 181 EGMKMNAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQLLGLNPKYAR 240 Query: 4597 PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4418 PDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNG+PAHIIS Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300 Query: 4417 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4238 EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 4237 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4058 TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420 Query: 4057 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYST 3878 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 3877 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIVQDT 3698 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 3697 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3518 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600 Query: 3517 LMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3338 L RTSAWHSE ESG+ITPGDT VRIEKGE+++GTLCKK LGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LQRTSAWHSEAESGNITPGDTFVRIEKGELLAGTLCKKALGTSTGSLIHVIWEEVGPDAA 660 Query: 3337 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQDKKL 3158 RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKNEVK+LI AQ K+L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720 Query: 3157 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2978 EAEPGRTMMDSFEN+VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2977 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2798 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2797 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2618 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900 Query: 2617 LDSLKMKKSDFDKFFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2438 LDSLKMKKS+FDK F YE+DDENWNP YML EHVEDLKTIREFRNVFDAEVQKLE DR Q Sbjct: 901 LDSLKMKKSEFDKTFSYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960 Query: 2437 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 2258 LGTEIA TGDNSWP+PVNLKRLIWNAQKTFK+D RR SDMHPMEIVEA+DKLQERLKVVP Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020 Query: 2257 GDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLVAPG 2078 GDDL+S+EAQKNATLFF+ILLRSTFASKRVL+EYRLTREAFEWVIGEIESRFLQSLVAPG Sbjct: 1021 GDDLLSVEAQKNATLFFSILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 2077 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1898 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSV+LK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140 Query: 1897 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 1718 PE KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFV SYYEMPDEE+ Sbjct: 1141 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVNSYYEMPDEEV 1200 Query: 1717 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1538 P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 1537 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEGFKP 1358 N EAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKFD +EGFK Sbjct: 1261 NAEAPKGELVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPNEGFKA 1320 Query: 1357 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1178 E EWMLDTEGVNLLAV+CH+DVDARRTTSNHLIE++E+LGIEAVRRSLLDELRVVISFDG Sbjct: 1321 EQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDG 1380 Query: 1177 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 998 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETDY Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1440 Query: 997 LRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMDGLEFGMTPSRSPITGTP 818 LRGVTENIMLGQLAPIGTGDCALYLN++ML+ AI++QLPSYMDGL+FGMTPSRSP++GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTP 1500 Query: 817 YHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 YH+GMMSPNYLLSPNLRLSPI+DAQFSPYVGGM F Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535 >ref|XP_008242006.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Prunus mume] gi|645273710|ref|XP_008242007.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Prunus mume] Length = 1844 Score = 2847 bits (7379), Expect = 0.0 Identities = 1405/1535 (91%), Positives = 1465/1535 (95%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MD+RFPFSPAEVAKVR VQFGILSPDEIRQMSVVQIEHSET GKPK GLSDPRLGTI Sbjct: 1 MDIRFPFSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLS+MRCVCFNCSKIL DE+DHK Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSVMRCVCFNCSKILVDEDDHK 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXEPVKKSRGGCGAQQPKLGI 4778 FKQA +I++PKNRLKKILDACK+KTKC EPVKKSRGGCGAQQPKL I Sbjct: 121 FKQALRIKSPKNRLKKILDACKNKTKCDGGDEIDVQGQESEEPVKKSRGGCGAQQPKLSI 180 Query: 4777 EGMKINAEYKIQKKKSDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPKYAR 4598 EGMK+NAEYK Q+KKSDD EQLPEPVERKQ L+AERVL+VLKRISDED LLGLNPKYAR Sbjct: 181 EGMKMNAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQLLGLNPKYAR 240 Query: 4597 PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4418 PDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNG+PAHIIS Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300 Query: 4417 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4238 EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 4237 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4058 TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420 Query: 4057 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYST 3878 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 3877 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIVQDT 3698 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 3697 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3518 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600 Query: 3517 LMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3338 L RTSAWHSE ESG++TPGDT VRIEKGE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LQRTSAWHSEAESGNVTPGDTFVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660 Query: 3337 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQDKKL 3158 RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKNEVK+LI AQ K+L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720 Query: 3157 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2978 EAEPGRTMMDSFEN+VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2977 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2798 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2797 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2618 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900 Query: 2617 LDSLKMKKSDFDKFFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2438 LDSLKMKKS+FDK F YE+DDENWNP YML EHVEDLKTIREFRNVFDAEVQKLE DR Q Sbjct: 901 LDSLKMKKSEFDKTFSYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960 Query: 2437 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 2258 LGTEIA TGDNSWP+PVNLKRLIWNAQKTFK+D RR SDMHPMEIVEA+DKLQERLKVVP Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020 Query: 2257 GDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLVAPG 2078 GDDL+S+EAQKNATLFF+ILLRSTFASKRVL+EYRLTREAFEWVIGEIESRFLQSLVAPG Sbjct: 1021 GDDLLSVEAQKNATLFFSILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 2077 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1898 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSV+LK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140 Query: 1897 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 1718 E KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFV SYYEMPDEE+ Sbjct: 1141 SEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVNSYYEMPDEEV 1200 Query: 1717 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1538 P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 1537 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEGFKP 1358 N EAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKFD EGFK Sbjct: 1261 NAEAPKGELVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPSEGFKA 1320 Query: 1357 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1178 E EWMLDTEGVNLLAV+CH+DVDARRTTSNHLIE++E+LGIEAVRRSLLDELRVVISFDG Sbjct: 1321 EQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDG 1380 Query: 1177 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 998 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETDY Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1440 Query: 997 LRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMDGLEFGMTPSRSPITGTP 818 LRGVTENIMLGQLAPIGTGDCALYLN++ML+ AI++QLPSYMDGL+FGMTPSRSP++GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTP 1500 Query: 817 YHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 YH+GMMSPNYLLSPNLRLSPI+DAQFSPYVGGM F Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535 >ref|XP_009344822.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Pyrus x bretschneideri] Length = 1820 Score = 2842 bits (7367), Expect = 0.0 Identities = 1395/1535 (90%), Positives = 1466/1535 (95%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MD+RFP+SPAEVAKV+ VQFGILSPDEIRQMSVV+IEHSET GKPK GLSDPRLGTI Sbjct: 1 MDIRFPYSPAEVAKVKCVQFGILSPDEIRQMSVVEIEHSETMLGGKPKTAGLSDPRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+K VLS+MRCVCFNCSKIL DE+DHK Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSVMRCVCFNCSKILVDEDDHK 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXEPVKKSRGGCGAQQPKLGI 4778 FKQA +I+NPK+RLKKILDACK+KTKC EPVKKSRGGCGAQQPKL I Sbjct: 121 FKQAMRIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180 Query: 4777 EGMKINAEYKIQKKKSDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPKYAR 4598 EGMK+NAEYK Q+KK+DDPEQLPEPVERKQ L+AERVL+VLKRISDED +LGLNPKYAR Sbjct: 181 EGMKMNAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDSQILGLNPKYAR 240 Query: 4597 PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4418 PDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHN+NLRRQERNG+PAHIIS Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGSPAHIIS 300 Query: 4417 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4238 EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 4237 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4058 TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 4057 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYST 3878 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 3877 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIVQDT 3698 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQANRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540 Query: 3697 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3518 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600 Query: 3517 LMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3338 L RTSAWHSE+ESG+ITPGDT VRIEKGE++SGTLCKK LGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LQRTSAWHSESESGNITPGDTLVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660 Query: 3337 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQDKKL 3158 RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKNEVK+LI AQ K+L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720 Query: 3157 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2978 EAEPGRTMMDSFEN+VNQVLN+ARDDAGSSAQKSL ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLDESNNLKAMVTAGSKGSFINISQMT 780 Query: 2977 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2798 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2797 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2618 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900 Query: 2617 LDSLKMKKSDFDKFFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2438 LDSLKMKK++FD+ F YE+DDENWNP YML EHVEDLKTIREFRNVFDAEVQKLE DR Q Sbjct: 901 LDSLKMKKTEFDRTFTYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960 Query: 2437 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 2258 LGTEIA TGDNSWP+PVNLKRLIWNAQKTFK+D RR SDMHPMEIVEA+DKLQERLKVVP Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020 Query: 2257 GDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLVAPG 2078 GDD +S+EAQKNATLFFNILLRSTFASKRVL+EYRLTREAFEWVIGEIESRFLQSLVAPG Sbjct: 1021 GDDQLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 2077 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1898 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSV+LK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140 Query: 1897 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 1718 PE KTKERAKNVQCALEYTTLRSVTQATEVWYDPDP ST+IEED+DFVK+YYEMPDEE+ Sbjct: 1141 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPTSTVIEEDIDFVKAYYEMPDEEV 1200 Query: 1717 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1538 P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 1537 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEGFKP 1358 N EAPKGE+ DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKFD +EGFK Sbjct: 1261 NAEAPKGEMVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDQNEGFKA 1320 Query: 1357 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1178 E EWMLDTEGVNLLAV+CH+DVDARRTTSNHLIE++E+LGIEAVRRSLLDELRVVISFDG Sbjct: 1321 EQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDG 1380 Query: 1177 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 998 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETDY Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1440 Query: 997 LRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMDGLEFGMTPSRSPITGTP 818 LRGVTENIMLGQLAPIGTGDCALYLN++ML+ AI++QLPSYMDGL+FGMTPSRSP++GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTP 1500 Query: 817 YHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 YH+GMMSPNYLLSPNLRLSPI+DAQFSPYVGGM F Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535 >ref|XP_010029631.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Eucalyptus grandis] gi|629090320|gb|KCW56573.1| hypothetical protein EUGRSUZ_I02304 [Eucalyptus grandis] Length = 1852 Score = 2838 bits (7358), Expect = 0.0 Identities = 1395/1535 (90%), Positives = 1468/1535 (95%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MD+RFPFSPAEVAKVR+VQFGILSPDEIRQMSVVQIEH ETTERGKPK GLSDPRLGTI Sbjct: 1 MDIRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKIL DE+DHK Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILTDEDDHK 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXEPVKKSRGGCGAQQPKLGI 4778 FKQA +IRNPKNRLKKILDACK+K+KC EP KK+ GGCGAQQPKL I Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCDGGDDVDTKGQGSEEPKKKNHGGCGAQQPKLTI 180 Query: 4777 EGMKINAEYKIQKKKSDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPKYAR 4598 EGMK+ AEYK Q+KK+DD +Q+PEPVERKQ LSAERVL+VLKRISDE C LLGLNPKYAR Sbjct: 181 EGMKMIAEYKAQRKKNDDQDQIPEPVERKQTLSAERVLSVLKRISDEHCQLLGLNPKYAR 240 Query: 4597 PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4418 PDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRQQERNGAPAHIIS 300 Query: 4417 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4238 EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 4237 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4058 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 4057 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYST 3878 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 3877 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIVQDT 3698 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 3697 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3518 LLGCRKITKRDTFIEKDVFMN+LMWWEDFDGK+P PAILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNVLMWWEDFDGKVPTPAILKPRPLWTGKQVFNLIIPKQIN 600 Query: 3517 LMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3338 L+R SAWHSETE+G ITPGDTQVRIEKGE++SGTLCKK LGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LLRNSAWHSETETGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660 Query: 3337 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQDKKL 3158 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETIS AK+EVK LI+ AQ+KKL Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISSAKDEVKRLIKDAQEKKL 720 Query: 3157 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2978 E EPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2977 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2798 ACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPFGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2797 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2618 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900 Query: 2617 LDSLKMKKSDFDKFFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2438 LDSLKMKK++FD+ FRYEIDDENWNP YMLPE+ EDL++I E R+VFDAEVQKLEADRYQ Sbjct: 901 LDSLKMKKTEFDRVFRYEIDDENWNPDYMLPENAEDLRSIGELRDVFDAEVQKLEADRYQ 960 Query: 2437 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 2258 LGTEIATTGDN+WP+PVNLKRLIWNAQKTFK+DLRRPSD+HP+E+VEA+DKLQERLKVVP Sbjct: 961 LGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDIHPVEVVEAIDKLQERLKVVP 1020 Query: 2257 GDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLVAPG 2078 G+D +S+EAQKNATLFFNILLRSTFASKRVL EYRLTREAF+WVIGEIESRFLQSLVAPG Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 1080 Query: 2077 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1898 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140 Query: 1897 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 1718 PEV KTKE AK VQCALEYTTLRSVTQATEVWYDPDP ST IEED+DFVKSY EMPDEEI Sbjct: 1141 PEVSKTKENAKTVQCALEYTTLRSVTQATEVWYDPDPTSTRIEEDIDFVKSYIEMPDEEI 1200 Query: 1717 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1538 +PEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDL CIFNDDNA+KLILRIRIM Sbjct: 1201 SPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLNCIFNDDNADKLILRIRIM 1260 Query: 1537 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEGFKP 1358 NDE PKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+GKVNKF++++GFKP Sbjct: 1261 NDEVPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNGKVNKFNENDGFKP 1320 Query: 1357 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1178 E EWMLDTEGVNLLAVMCHE VDA RTTSNHLIE+IEVLGIEAVRRSLLDELRVVISFDG Sbjct: 1321 ETEWMLDTEGVNLLAVMCHEGVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFDG 1380 Query: 1177 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 998 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE+DY Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDY 1440 Query: 997 LRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMDGLEFGMTPSRSPITGTP 818 LRGVTENIMLGQLAPIGTGDCALYLN++ML+ AI++QLPSYMDGL+FGMTP+RSPI+GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKHAIELQLPSYMDGLDFGMTPARSPISGTP 1500 Query: 817 YHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 YH+GMMSP+YLLSPNLRLSP TDAQFSPYVGGM F Sbjct: 1501 YHEGMMSPSYLLSPNLRLSPTTDAQFSPYVGGMAF 1535 >ref|XP_009337078.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Pyrus x bretschneideri] Length = 1820 Score = 2838 bits (7356), Expect = 0.0 Identities = 1393/1535 (90%), Positives = 1466/1535 (95%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MD+RFPFSPAEVAKV+ VQFGILSPDEIRQMSVV+IEHSET GKPK GLSDPRLGTI Sbjct: 1 MDIRFPFSPAEVAKVKCVQFGILSPDEIRQMSVVEIEHSETMLGGKPKTAGLSDPRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLS+MRCVCFNCSKIL DE+DHK Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFIKTVLSVMRCVCFNCSKILVDEDDHK 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXEPVKKSRGGCGAQQPKLGI 4778 FKQA +I+NPKNRLKKILDACK+K+KC EPVKKSRGGCGAQQPKL I Sbjct: 121 FKQAMRIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180 Query: 4777 EGMKINAEYKIQKKKSDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPKYAR 4598 EGMK+NAEYK Q+KK+DD EQLPEPVERKQ L+AERVL+VLKRISDED +LGLNPKYAR Sbjct: 181 EGMKMNAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQILGLNPKYAR 240 Query: 4597 PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4418 PDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHN+NLRRQERNG+PAHIIS Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGSPAHIIS 300 Query: 4417 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4238 EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 4237 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4058 TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 4057 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYST 3878 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGD++LFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFILFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 3877 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIVQDT 3698 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 3697 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3518 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600 Query: 3517 LMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3338 L RTSAWHSE+ESG+ITPGDT VRIEKGE++SGTLCKK LGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LQRTSAWHSESESGNITPGDTLVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660 Query: 3337 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQDKKL 3158 RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKNEVK+LI AQ K+L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720 Query: 3157 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2978 EAEPGRTMMDSFEN+VNQVLN+ARDDAGSSAQKSL ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLDESNNLKAMVTAGSKGSFINISQMT 780 Query: 2977 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2798 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2797 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2618 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900 Query: 2617 LDSLKMKKSDFDKFFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2438 LDSLKMKK++FDK F YE+DDE WNP YML EHVEDLKTIREFRNVFDAEVQKLE DR Q Sbjct: 901 LDSLKMKKTEFDKTFTYELDDEYWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960 Query: 2437 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 2258 LGTEIA TGDNSWP+PVNLKRLIWNAQKTFK+D RR SDMHPMEIVEA+DKLQERLKVVP Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020 Query: 2257 GDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLVAPG 2078 GDDL+S+EAQKNATLFFNILLRSTFASKRVL+EYRLTREAFEWVIGEIESRFLQSLVAPG Sbjct: 1021 GDDLLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 2077 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1898 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSV+LK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140 Query: 1897 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 1718 PE KTKERAKNVQCALEYTTLRSVTQATEVWYDP+P STII+ED+DFV++YYEMPDEE+ Sbjct: 1141 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPEPTSTIIDEDIDFVRAYYEMPDEEV 1200 Query: 1717 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1538 P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 1537 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEGFKP 1358 N EAPKGE+ DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKFD +EGFK Sbjct: 1261 NAEAPKGEMVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPNEGFKA 1320 Query: 1357 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1178 E EWMLDTEGVNLLAV+CH+DVDARRTTSNHLIE++E+LGIEAVRRSLLDELRVVISFDG Sbjct: 1321 EQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDG 1380 Query: 1177 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 998 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETDY Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1440 Query: 997 LRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMDGLEFGMTPSRSPITGTP 818 LRGVTENIMLGQLAPIGTGDCALYLN++ML+ AI++QLPSYMDGL+FGMTPSRSP++GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTP 1500 Query: 817 YHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 YH+GMMSPNYLLSPNLRLSPI+DAQFSPYVGGM F Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535 >ref|XP_009363439.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Pyrus x bretschneideri] Length = 1820 Score = 2838 bits (7356), Expect = 0.0 Identities = 1393/1535 (90%), Positives = 1466/1535 (95%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MD+RFPFSPAEVAKV+ VQFGILSPDEIRQMSVV+IEHSET GKPK GLSDPRLGTI Sbjct: 1 MDIRFPFSPAEVAKVKCVQFGILSPDEIRQMSVVEIEHSETMLGGKPKTAGLSDPRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLS+MRCVCFNCSKIL DE+DHK Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFIKTVLSVMRCVCFNCSKILVDEDDHK 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXEPVKKSRGGCGAQQPKLGI 4778 FKQA +I+NPKNRLKKILDACK+K+KC EPVKKSRGGCGAQQPKL I Sbjct: 121 FKQAMRIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180 Query: 4777 EGMKINAEYKIQKKKSDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPKYAR 4598 EGMK+NAEYK Q+KK+DD EQLPEPVERKQ L+AERVL+VLKRISDED +LGLNPKYAR Sbjct: 181 EGMKMNAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQILGLNPKYAR 240 Query: 4597 PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4418 PDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHN+NLRRQERNG+PAHIIS Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGSPAHIIS 300 Query: 4417 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4238 EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 4237 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4058 TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 4057 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYST 3878 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGD++LFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFILFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 3877 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIVQDT 3698 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 3697 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3518 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600 Query: 3517 LMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3338 L RTSAWHSE+ESG+ITPGDT VRIEKGE++SGTLCKK LGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LQRTSAWHSESESGNITPGDTLVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660 Query: 3337 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQDKKL 3158 RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKNEVK+LI AQ K+L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720 Query: 3157 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2978 EAEPGRTMMDSFEN+VNQVLN+ARDDAGSSAQKSL ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLDESNNLKAMVTAGSKGSFINISQMT 780 Query: 2977 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2798 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2797 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2618 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900 Query: 2617 LDSLKMKKSDFDKFFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2438 LDSLKMKK++FDK F YE+DDE WNP YML EHVEDLKTIREFRNVFDAEVQKLE DR Q Sbjct: 901 LDSLKMKKTEFDKTFTYELDDEYWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960 Query: 2437 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 2258 LGTEIA TGDNSWP+PVNLKRLIWNAQKTFK+D RR SDMHPMEIVEA+DKLQERLKVVP Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020 Query: 2257 GDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLVAPG 2078 GDDL+S+EAQKNATLFFNILLRSTFASKRVL+EYRLTREAFEWVIGEIESRFLQSLVAPG Sbjct: 1021 GDDLLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 2077 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1898 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSV+LK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140 Query: 1897 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 1718 PE KTKERAKNVQCALEYTTLRSVTQATEVWYDP+P STII+ED+DFV++YYEMPDEE+ Sbjct: 1141 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPEPTSTIIDEDIDFVRAYYEMPDEEV 1200 Query: 1717 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1538 P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 1537 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEGFKP 1358 N EAPKGE+ DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKFD +EGFK Sbjct: 1261 NAEAPKGEMVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPNEGFKA 1320 Query: 1357 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1178 E EWMLDTEGVNLLAV+CH+DVDARRTTSNHLIE++E+LGIEAVRRSLLDELRVVISFDG Sbjct: 1321 EQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDG 1380 Query: 1177 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 998 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETDY Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1440 Query: 997 LRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMDGLEFGMTPSRSPITGTP 818 LRGVTENIMLGQLAPIGTGDCALYLN++ML+ AI++QLPSYMDGL+FGMTPSRSP++GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTP 1500 Query: 817 YHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 YH+GMMSPNYLLSPNLRLSPI+DAQFSPYVGGM F Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535 >ref|XP_008337428.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit 1-like [Malus domestica] Length = 1763 Score = 2835 bits (7350), Expect = 0.0 Identities = 1393/1535 (90%), Positives = 1463/1535 (95%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MD+RFP+SPAEVAKV+ VQFGILSPDEIRQMSVV+IEHSET GKPK GLSDPRLGTI Sbjct: 1 MDIRFPYSPAEVAKVKCVQFGILSPDEIRQMSVVEIEHSETMLGGKPKTAGLSDPRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+K VLS+MRCVCFNCSKIL DE+DHK Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSVMRCVCFNCSKILVDEDDHK 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXEPVKKSRGGCGAQQPKLGI 4778 FKQA +I+NPK+RLKKILDACK+KTKC EPVKKSRGGCGAQQPKL I Sbjct: 121 FKQAMRIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180 Query: 4777 EGMKINAEYKIQKKKSDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPKYAR 4598 EGMK+NAEYK Q+KK+DDPEQLPEPVERKQ L+AERVL+VLKRISDED +LGLNPKYAR Sbjct: 181 EGMKMNAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDSQILGLNPKYAR 240 Query: 4597 PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4418 PDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHN+NLRRQERNG+PAHIIS Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGSPAHIIS 300 Query: 4417 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4238 EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 4237 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4058 TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 4057 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYST 3878 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 3877 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIVQDT 3698 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQANRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540 Query: 3697 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3518 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600 Query: 3517 LMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3338 L RTSAWHSE+ESG+ITPGDT VRIEKGE++SGTLCKK LGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LQRTSAWHSESESGNITPGDTLVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660 Query: 3337 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQDKKL 3158 RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKNEVK+LI AQ K+L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720 Query: 3157 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2978 EAEPGRTMMDSFEN+VNQVLN+ARDDAGSSAQKSL ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLDESNNLKAMVTAGSKGSFINISQMT 780 Query: 2977 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2798 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2797 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2618 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900 Query: 2617 LDSLKMKKSDFDKFFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2438 LDSLKMKK++FD F YE+DDE WNP YML EHVEDLKTIREFRNVFDAEVQKLE DR Q Sbjct: 901 LDSLKMKKTEFDXTFTYELDDEXWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960 Query: 2437 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 2258 LGTEIA TGDNSWP+PVNLKRLIWNAQKTFK+D RR SDMHPMEIVEA+DKLQERLKVVP Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020 Query: 2257 GDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLVAPG 2078 GDD +S+EAQKNATLFFNILLRSTFASKRVL+EYRLTREAFEWVIGEIESRFLQSLVAPG Sbjct: 1021 GDDXLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 2077 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1898 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSV+LK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140 Query: 1897 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 1718 E KTKERAKNVQCALEYTTLRSVTQATEVWYDPDP ST+IEED+DFVK+YYEMPDEE+ Sbjct: 1141 XEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPTSTVIEEDIDFVKAYYEMPDEEV 1200 Query: 1717 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1538 P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 1537 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEGFKP 1358 N EAPKGE+ DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKFD +EGFK Sbjct: 1261 NAEAPKGEMVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDQNEGFKA 1320 Query: 1357 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1178 E EWMLDTEGVNLLAV+CH+DVDARRTTSNHLIE++E+LGIEAVRRSLLDELRVVISFDG Sbjct: 1321 EQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDG 1380 Query: 1177 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 998 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETDY Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1440 Query: 997 LRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMDGLEFGMTPSRSPITGTP 818 LRGVTENIMLGQLAPIGTGDCALYLN++ML+ AI++QLPSYMDGL+FGMTPSRSP++GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTP 1500 Query: 817 YHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 YH+GMMSPNYLLSPNLRLSPI+DAQFSPYVGGM F Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535 >ref|XP_006828844.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Amborella trichopoda] gi|548833823|gb|ERM96260.1| hypothetical protein AMTR_s00001p00152770 [Amborella trichopoda] Length = 1844 Score = 2834 bits (7346), Expect = 0.0 Identities = 1401/1538 (91%), Positives = 1475/1538 (95%), Gaps = 3/1538 (0%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MDMRFP+SPAEVAKVR+VQFGILSP+EIR MSVV+I+HSET ERGKPKP GLSDPRLGTI Sbjct: 1 MDMRFPYSPAEVAKVRVVQFGILSPEEIRNMSVVEIQHSETMERGKPKPSGLSDPRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRKMKC+TC ANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCS+ILADEEDH+ Sbjct: 61 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSRILADEEDHR 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXEPV--KKSRGGCGAQQPKL 4784 FKQA KIRNPK RLKK+LD CK+KTKC E V KK GGCGAQQPK+ Sbjct: 121 FKQALKIRNPKTRLKKVLDCCKNKTKCEGGDDIDEDQAQDSEEVVKKKRHGGCGAQQPKI 180 Query: 4783 GIEGMKINAEYKIQKKKSDDPEQ-LPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPK 4607 IEGMK+ AEYK+ +KK+D+ EQ LPEPVERKQQL+AE+VLNVLKRI+DEDC LLGLNPK Sbjct: 181 TIEGMKMVAEYKLPRKKNDEQEQMLPEPVERKQQLAAEKVLNVLKRITDEDCQLLGLNPK 240 Query: 4606 YARPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAH 4427 YARPDWMILQV+ PSVMMDTS+RSEDDLTHQLAM+IRHNENL+RQE+NGAPAH Sbjct: 241 YARPDWMILQVMPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQEKNGAPAH 300 Query: 4426 IISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 4247 IISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF Sbjct: 301 IISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 360 Query: 4246 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 4067 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY Sbjct: 361 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 420 Query: 4066 IIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMP 3887 IIREDGQRLDLRYLKKS DHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRIKIMP Sbjct: 421 IIREDGQRLDLRYLKKSGDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 480 Query: 3886 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIV 3707 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIV Sbjct: 481 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 540 Query: 3706 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 3527 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK Sbjct: 541 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 600 Query: 3526 QINLMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGP 3347 QINL+R SAWHSE+ESG ITPGDT VRIE+GE++SGTLCKKTLGTS+GSLIHVIWEEVGP Sbjct: 601 QINLIRYSAWHSESESGFITPGDTCVRIERGELLSGTLCKKTLGTSSGSLIHVIWEEVGP 660 Query: 3346 DAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQD 3167 DAARKFLGHTQWLVNYWLLQ FSIGIGDTIADAATMEKINETISKAKNEVKELI+ AQ+ Sbjct: 661 DAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADAATMEKINETISKAKNEVKELIKAAQE 720 Query: 3166 KKLEAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 2987 K+LEAEPGRTMM+SFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS Sbjct: 721 KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 780 Query: 2986 QMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 2807 QMTACVGQQNVEGKRIP+GF DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG Sbjct: 781 QMTACVGQQNVEGKRIPFGFNDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 840 Query: 2806 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIE 2627 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE Sbjct: 841 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 900 Query: 2626 SQKLDSLKMKKSDFDKFFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEAD 2447 SQKLDSLKMK+++F+ ++YEID ENW+PSYMLPEHVEDLKTIREF+NVFDAEVQKLEAD Sbjct: 901 SQKLDSLKMKRAEFENVYKYEIDQENWSPSYMLPEHVEDLKTIREFQNVFDAEVQKLEAD 960 Query: 2446 RYQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLK 2267 R+QLGTEI TTGDNSWPMPVNLKRLIWNAQK FKVDLRRPSDMHPMEIVEAVDKLQERLK Sbjct: 961 RHQLGTEITTTGDNSWPMPVNLKRLIWNAQKMFKVDLRRPSDMHPMEIVEAVDKLQERLK 1020 Query: 2266 VVPGDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLV 2087 VVPGDDLMS+EAQKNATLFFNILLRSTFASKRVL EYRLTREAF+WVIGEIESRFLQSLV Sbjct: 1021 VVPGDDLMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLV 1080 Query: 2086 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1907 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV Sbjct: 1081 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1140 Query: 1906 FLKPEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 1727 +LK EV KTKE+AKNVQCALEYTTLRSVT+ATEVWYDPDPMSTIIEEDVDFV+SYYEMPD Sbjct: 1141 YLKHEVNKTKEKAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVRSYYEMPD 1200 Query: 1726 EEIAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1547 EE+APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI Sbjct: 1201 EEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1260 Query: 1546 RIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEG 1367 RIMNDEAPKGEL DES+EDDVFLKKIESNMLTEMALRGIPDINKVFIKSGK+NKFD++EG Sbjct: 1261 RIMNDEAPKGELQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDENEG 1320 Query: 1366 FKPENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVIS 1187 FKPE EWMLDTEGVNLLAVMC+E+VDA RTTSNHLIEVI+VLGIEAVRR+LLDELRVVIS Sbjct: 1321 FKPEIEWMLDTEGVNLLAVMCNEEVDATRTTSNHLIEVIQVLGIEAVRRALLDELRVVIS 1380 Query: 1186 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1007 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE Sbjct: 1381 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1440 Query: 1006 TDYLRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMDGLEFGMTPSRSPIT 827 D+LRGVTENIMLGQLAPIGTGDCALYLN++MLQQAI++QLPSYM+G++FGMTPSRSP+T Sbjct: 1441 ADHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGMDFGMTPSRSPMT 1500 Query: 826 GTPYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 GTPYH+GMMSP YLLSPN+R SPITDAQFSPYVGGM F Sbjct: 1501 GTPYHEGMMSP-YLLSPNMRSSPITDAQFSPYVGGMAF 1537 >ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X2 [Gossypium raimondii] Length = 1832 Score = 2833 bits (7345), Expect = 0.0 Identities = 1397/1536 (90%), Positives = 1472/1536 (95%), Gaps = 1/1536 (0%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MD+RFP+SPAEVAKVR+VQFGILSPDEIRQMSVVQIEHSETTERGKPK GGLSDPRLGTI Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKILADEEDHK Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXEPVKKSRGGCGAQQPKLGI 4778 FKQA KI+NPKNRLKKILDACK+KTKC EPVKKSRGGCGAQQPKL I Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180 Query: 4777 EGMKINAEYKIQKKKSDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPKYAR 4598 +GMK+ AEYK Q+KK+DDPEQLPEPVERKQ L+AERVL+VLKRISDEDC LLGLNPKYAR Sbjct: 181 DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240 Query: 4597 PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4418 PDWMILQVL PSVMMDTS+RSEDDLTH LAMIIRHNENLRRQERNG+PAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300 Query: 4417 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4238 EFAQLLQFHVATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 4237 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4058 TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 4057 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYST 3878 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRI+IMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480 Query: 3877 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIVQDT 3698 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 3697 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3518 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600 Query: 3517 LMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3338 L+RTSAWHSE+E+G ITPGDTQVRIEKGEV+SGTLCKKTLGTS+GSLIHVIWEEVGPDAA Sbjct: 601 LLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660 Query: 3337 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQDKKL 3158 RKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETISKAK++VK+LI AQ+K L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKDL 720 Query: 3157 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2978 E EPGRTMM+SFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2977 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2798 ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2797 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2618 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900 Query: 2617 LDSLKMKKSDFDKFFRYEIDDENWNP-SYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 2441 LDSLKMKKS+FD+ FRY+IDDENWNP SYMLPEH+EDL+TI+E R+VFDAEV KLEADRY Sbjct: 901 LDSLKMKKSEFDRVFRYKIDDENWNPTSYMLPEHIEDLRTIQELRDVFDAEVNKLEADRY 960 Query: 2440 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2261 QLGTEIA TGD++WP+PVNLKRLIWNAQKTFKVD RR SD+HP+EIV++VDKLQERLKVV Sbjct: 961 QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020 Query: 2260 PGDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLVAP 2081 PG D +S+EAQKNATLFF ILLRST ASKRVL EYRLT+EAFEWVIGEIESRFLQSLVAP Sbjct: 1021 PGADPLSVEAQKNATLFFCILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080 Query: 2080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFL 1901 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+L Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140 Query: 1900 KPEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 1721 PE KTKE+AKNVQCALEYTTLRSVT ATEVWYDPDPMSTIIEED+DFVKSYYEMPDEE Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE 1200 Query: 1720 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1541 +APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260 Query: 1540 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEGFK 1361 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K +KFD+ +G+K Sbjct: 1261 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320 Query: 1360 PENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1181 EW+LDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD Sbjct: 1321 TGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380 Query: 1180 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1001 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESD 1440 Query: 1000 YLRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMDGLEFGMTPSRSPITGT 821 YLRGVTENIMLGQLAPIGTGDCALYLN++ML+ AI++QLPSYM+GLEFGMTP+RSP++GT Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGT 1500 Query: 820 PYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 PYH+GMMSP+YLLSPNLRLSPI+DAQFSPYVGGM F Sbjct: 1501 PYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAF 1536 >gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium raimondii] Length = 1809 Score = 2833 bits (7345), Expect = 0.0 Identities = 1397/1536 (90%), Positives = 1472/1536 (95%), Gaps = 1/1536 (0%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MD+RFP+SPAEVAKVR+VQFGILSPDEIRQMSVVQIEHSETTERGKPK GGLSDPRLGTI Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKILADEEDHK Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXEPVKKSRGGCGAQQPKLGI 4778 FKQA KI+NPKNRLKKILDACK+KTKC EPVKKSRGGCGAQQPKL I Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180 Query: 4777 EGMKINAEYKIQKKKSDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPKYAR 4598 +GMK+ AEYK Q+KK+DDPEQLPEPVERKQ L+AERVL+VLKRISDEDC LLGLNPKYAR Sbjct: 181 DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240 Query: 4597 PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4418 PDWMILQVL PSVMMDTS+RSEDDLTH LAMIIRHNENLRRQERNG+PAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300 Query: 4417 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4238 EFAQLLQFHVATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 4237 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4058 TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 4057 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYST 3878 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRI+IMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480 Query: 3877 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIVQDT 3698 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 3697 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3518 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600 Query: 3517 LMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3338 L+RTSAWHSE+E+G ITPGDTQVRIEKGEV+SGTLCKKTLGTS+GSLIHVIWEEVGPDAA Sbjct: 601 LLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660 Query: 3337 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQDKKL 3158 RKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETISKAK++VK+LI AQ+K L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKDL 720 Query: 3157 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2978 E EPGRTMM+SFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2977 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2798 ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2797 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2618 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900 Query: 2617 LDSLKMKKSDFDKFFRYEIDDENWNP-SYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 2441 LDSLKMKKS+FD+ FRY+IDDENWNP SYMLPEH+EDL+TI+E R+VFDAEV KLEADRY Sbjct: 901 LDSLKMKKSEFDRVFRYKIDDENWNPTSYMLPEHIEDLRTIQELRDVFDAEVNKLEADRY 960 Query: 2440 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2261 QLGTEIA TGD++WP+PVNLKRLIWNAQKTFKVD RR SD+HP+EIV++VDKLQERLKVV Sbjct: 961 QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020 Query: 2260 PGDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLVAP 2081 PG D +S+EAQKNATLFF ILLRST ASKRVL EYRLT+EAFEWVIGEIESRFLQSLVAP Sbjct: 1021 PGADPLSVEAQKNATLFFCILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080 Query: 2080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFL 1901 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+L Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140 Query: 1900 KPEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 1721 PE KTKE+AKNVQCALEYTTLRSVT ATEVWYDPDPMSTIIEED+DFVKSYYEMPDEE Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE 1200 Query: 1720 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1541 +APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260 Query: 1540 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEGFK 1361 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K +KFD+ +G+K Sbjct: 1261 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320 Query: 1360 PENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1181 EW+LDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD Sbjct: 1321 TGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380 Query: 1180 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1001 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESD 1440 Query: 1000 YLRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMDGLEFGMTPSRSPITGT 821 YLRGVTENIMLGQLAPIGTGDCALYLN++ML+ AI++QLPSYM+GLEFGMTP+RSP++GT Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGT 1500 Query: 820 PYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 PYH+GMMSP+YLLSPNLRLSPI+DAQFSPYVGGM F Sbjct: 1501 PYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAF 1536 >ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X1 [Gossypium raimondii] gi|823191464|ref|XP_012491468.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X1 [Gossypium raimondii] gi|823191467|ref|XP_012491470.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X1 [Gossypium raimondii] gi|823191470|ref|XP_012491471.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X1 [Gossypium raimondii] gi|763776132|gb|KJB43255.1| hypothetical protein B456_007G190500 [Gossypium raimondii] gi|763776133|gb|KJB43256.1| hypothetical protein B456_007G190500 [Gossypium raimondii] gi|763776135|gb|KJB43258.1| hypothetical protein B456_007G190500 [Gossypium raimondii] Length = 1846 Score = 2833 bits (7345), Expect = 0.0 Identities = 1397/1536 (90%), Positives = 1472/1536 (95%), Gaps = 1/1536 (0%) Frame = -3 Query: 5317 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5138 MD+RFP+SPAEVAKVR+VQFGILSPDEIRQMSVVQIEHSETTERGKPK GGLSDPRLGTI Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60 Query: 5137 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 4958 DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKILADEEDHK Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120 Query: 4957 FKQAQKIRNPKNRLKKILDACKSKTKCXXXXXXXXXXXXXXEPVKKSRGGCGAQQPKLGI 4778 FKQA KI+NPKNRLKKILDACK+KTKC EPVKKSRGGCGAQQPKL I Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180 Query: 4777 EGMKINAEYKIQKKKSDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCFLLGLNPKYAR 4598 +GMK+ AEYK Q+KK+DDPEQLPEPVERKQ L+AERVL+VLKRISDEDC LLGLNPKYAR Sbjct: 181 DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240 Query: 4597 PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4418 PDWMILQVL PSVMMDTS+RSEDDLTH LAMIIRHNENLRRQERNG+PAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300 Query: 4417 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4238 EFAQLLQFHVATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 4237 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4058 TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 4057 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYST 3878 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRI+IMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480 Query: 3877 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQANRPVMGIVQDT 3698 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 3697 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3518 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600 Query: 3517 LMRTSAWHSETESGHITPGDTQVRIEKGEVISGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3338 L+RTSAWHSE+E+G ITPGDTQVRIEKGEV+SGTLCKKTLGTS+GSLIHVIWEEVGPDAA Sbjct: 601 LLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660 Query: 3337 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRHAQDKKL 3158 RKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETISKAK++VK+LI AQ+K L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKDL 720 Query: 3157 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2978 E EPGRTMM+SFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2977 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2798 ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2797 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2618 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900 Query: 2617 LDSLKMKKSDFDKFFRYEIDDENWNP-SYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 2441 LDSLKMKKS+FD+ FRY+IDDENWNP SYMLPEH+EDL+TI+E R+VFDAEV KLEADRY Sbjct: 901 LDSLKMKKSEFDRVFRYKIDDENWNPTSYMLPEHIEDLRTIQELRDVFDAEVNKLEADRY 960 Query: 2440 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2261 QLGTEIA TGD++WP+PVNLKRLIWNAQKTFKVD RR SD+HP+EIV++VDKLQERLKVV Sbjct: 961 QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020 Query: 2260 PGDDLMSMEAQKNATLFFNILLRSTFASKRVLNEYRLTREAFEWVIGEIESRFLQSLVAP 2081 PG D +S+EAQKNATLFF ILLRST ASKRVL EYRLT+EAFEWVIGEIESRFLQSLVAP Sbjct: 1021 PGADPLSVEAQKNATLFFCILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080 Query: 2080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFL 1901 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+L Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140 Query: 1900 KPEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 1721 PE KTKE+AKNVQCALEYTTLRSVT ATEVWYDPDPMSTIIEED+DFVKSYYEMPDEE Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE 1200 Query: 1720 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1541 +APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260 Query: 1540 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDDDEGFK 1361 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K +KFD+ +G+K Sbjct: 1261 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320 Query: 1360 PENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1181 EW+LDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD Sbjct: 1321 TGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380 Query: 1180 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1001 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESD 1440 Query: 1000 YLRGVTENIMLGQLAPIGTGDCALYLNEKMLQQAIDIQLPSYMDGLEFGMTPSRSPITGT 821 YLRGVTENIMLGQLAPIGTGDCALYLN++ML+ AI++QLPSYM+GLEFGMTP+RSP++GT Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGT 1500 Query: 820 PYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMGF 713 PYH+GMMSP+YLLSPNLRLSPI+DAQFSPYVGGM F Sbjct: 1501 PYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAF 1536