BLASTX nr result
ID: Cornus23_contig00002943
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00002943
(2164 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007018433.1| Ribosomal RNA processing protein 1 B, putati... 332 e-114
ref|XP_012466639.1| PREDICTED: ribosomal RNA processing protein ... 324 e-110
gb|KNA04299.1| hypothetical protein SOVF_200950 [Spinacia oleracea] 280 2e-91
ref|XP_008801543.1| PREDICTED: ribosomal RNA processing protein ... 260 3e-91
ref|XP_009349233.1| PREDICTED: ribosomal RNA processing protein ... 340 4e-90
ref|XP_009349232.1| PREDICTED: ribosomal RNA processing protein ... 340 4e-90
ref|XP_009346032.1| PREDICTED: ribosomal RNA processing protein ... 338 9e-90
gb|KFK26287.1| hypothetical protein AALP_AA8G228200 [Arabis alpina] 283 1e-89
ref|XP_009359981.1| PREDICTED: ribosomal RNA processing protein ... 338 2e-89
ref|XP_009359980.1| PREDICTED: ribosomal RNA processing protein ... 338 2e-89
ref|XP_008223829.1| PREDICTED: ribosomal RNA processing protein ... 336 6e-89
ref|XP_010927061.1| PREDICTED: ribosomal RNA processing protein ... 260 8e-89
ref|XP_008378895.1| PREDICTED: ribosomal RNA processing protein ... 333 5e-88
ref|XP_008378894.1| PREDICTED: ribosomal RNA processing protein ... 333 5e-88
ref|XP_008382726.1| PREDICTED: ribosomal RNA processing protein ... 332 1e-87
ref|XP_008450836.1| PREDICTED: ribosomal RNA processing protein ... 330 2e-87
ref|XP_008450828.1| PREDICTED: ribosomal RNA processing protein ... 330 2e-87
ref|XP_009401563.1| PREDICTED: ribosomal RNA processing protein ... 253 1e-86
ref|XP_012449609.1| PREDICTED: ribosomal RNA processing protein ... 328 2e-86
ref|XP_011648968.1| PREDICTED: ribosomal RNA processing protein ... 327 4e-86
>ref|XP_007018433.1| Ribosomal RNA processing protein 1 B, putative [Theobroma cacao]
gi|508723761|gb|EOY15658.1| Ribosomal RNA processing
protein 1 B, putative [Theobroma cacao]
Length = 559
Score = 332 bits (852), Expect(2) = e-114
Identities = 193/408 (47%), Positives = 243/408 (59%), Gaps = 2/408 (0%)
Frame = -2
Query: 1914 GTSLIKHLGSCNKMRRDKALKLLLKIWLPSQSHLSEDDMKKLWKGLFYCLWHADKYPVQX 1735
G +LIK L +C+K RD+A++ LL WLPSQ+ +S+++MK+LWKGLFYC+WHADK P Q
Sbjct: 9 GPTLIKQLAACDKSTRDRAVRSLLHTWLPSQAEVSDEEMKRLWKGLFYCVWHADKLPAQS 68
Query: 1734 XXXXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLIRRFLHSCFLLLK 1555
SVF +TMRREWTGID LRLDKFYLLIRRFL+ F++LK
Sbjct: 69 DLIEKLSSVLPKLETGLSLQYFSVFLLTMRREWTGIDKLRLDKFYLLIRRFLNCFFVMLK 128
Query: 1554 NNCWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFLEEIKPFLPVSLH 1375
WDL+ R + VL +GTFLAD NYHIAS+FLEEI+PFLPV
Sbjct: 129 KWSWDLDFTRRSIRVLVDGTFLAD-------DKFQGNGVNYHIASIFLEEIRPFLPVKKE 181
Query: 1374 ALDVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQKSGEDVDFGDGT 1195
++V+ PF+ +MGK DKVLVGK++SNVFDV +K GR LE + +SG++VD G+
Sbjct: 182 VVEVLLEPFVGIMGKVGDKVLVGKIRSNVFDVFVKMGRRFLELK----RSGDEVDEGED- 236
Query: 1194 LVVFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDLESSGIEILIPEV 1015
LVV GTI L MG +AKFY+LGSS DC QGNRKV+ LHE FL+LEKDL GI++ IPE
Sbjct: 237 LVVLGTISLLMGFSAKFYELGSSADCCQGNRKVVLGLHEEFLKLEKDLTLLGIDVSIPEP 296
Query: 1014 NNFDHQVNVPKLIPIVVXXXXXXTMEVGCASE-SVKDTVEVAAPKGVN-DASVGKTSKKS 841
N + VP+LIPI ASE V D+ V+ P VN + S K KKS
Sbjct: 297 NEGGEEDEVPELIPI--------------ASEMEVDDSDGVSEPAEVNANGSAKKALKKS 342
Query: 840 RRAKNGLDGSNXXXXXXXXXXKGLADDVIQKTCLAVGESEEDGANANG 697
++AK GS AD + + ES NG
Sbjct: 343 KKAKKATRGSGKKTKKCKNAECSPADQ--ENDVMVPAESANSSIEQNG 388
Score = 108 bits (271), Expect(2) = e-114
Identities = 67/156 (42%), Positives = 87/156 (55%), Gaps = 12/156 (7%)
Frame = -3
Query: 698 VQFEKVASEVGLEDVDTSLYDSPKKTIKGTLFKKRKRMRTIEGPDSCDPDIA-------- 543
+QFEKVA+EVGL+ S D PK + G KKRKR+++++G S + ++
Sbjct: 405 LQFEKVAAEVGLDGDVASACDLPK--VNGAASKKRKRVKSVDGQKSQNGELTNQGDGEGG 462
Query: 542 ADAKSGEKSAKKVRFSMKNNLVWKXXXXXXXXXXXXXXSVTPRGSALKKGLSPGPIREMP 363
AK+GEKS K+VRFSMKNNLVWK SVTPRGSALKKG+ PGPI E+P
Sbjct: 463 GTAKTGEKSTKRVRFSMKNNLVWKPHSPLPPQSLRLPPSVTPRGSALKKGIPPGPITEVP 522
Query: 362 PAT----XXXXXXXXXXXXXXXSPAIKRMRKLQKLS 267
P T P +KR +KL+ +S
Sbjct: 523 PLTKKVKKAKSVKKARKVIKSMYPLVKRTKKLKSVS 558
>ref|XP_012466639.1| PREDICTED: ribosomal RNA processing protein 1 homolog [Gossypium
raimondii] gi|763747220|gb|KJB14659.1| hypothetical
protein B456_002G136300 [Gossypium raimondii]
Length = 555
Score = 324 bits (831), Expect(2) = e-110
Identities = 186/406 (45%), Positives = 237/406 (58%)
Frame = -2
Query: 1914 GTSLIKHLGSCNKMRRDKALKLLLKIWLPSQSHLSEDDMKKLWKGLFYCLWHADKYPVQX 1735
G SLIK L +C+K RDKA++ ++ WLPSQ+ LS+++MK+LWKGLF+C+WHADK PVQ
Sbjct: 5 GPSLIKQLAACDKSTRDKAVRSVINTWLPSQTQLSDEEMKRLWKGLFFCVWHADKLPVQS 64
Query: 1734 XXXXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLIRRFLHSCFLLLK 1555
SVF +TMRREWTGID LRLDKFYLLIR+FLH F +LK
Sbjct: 65 DLIEKLSSVVPKLEPPLSLQYFSVFLLTMRREWTGIDKLRLDKFYLLIRKFLHFFFAMLK 124
Query: 1554 NNCWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFLEEIKPFLPVSLH 1375
WDL R + VL +GTFLAD NYHIASVFLEE++PFLPV
Sbjct: 125 RWSWDLAFTRRSIRVLVDGTFLAD-------DKFQRNGVNYHIASVFLEELRPFLPVKKE 177
Query: 1374 ALDVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQKSGEDVDFGDGT 1195
L+++ PF+ +MG+ DK+LVGK++ NVFD +K GR LLE + S E+VD GD
Sbjct: 178 VLEILLEPFVGIMGRVSDKILVGKIRINVFDEFVKMGRRLLELKT----SIEEVDQGDD- 232
Query: 1194 LVVFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDLESSGIEILIPEV 1015
+VV GTI L MG + KFY+LGSS DC QGNRK++ +HE FL+LEKDL S GI+I IPE
Sbjct: 233 VVVLGTISLVMGFSKKFYELGSSVDCCQGNRKILLGVHEEFLKLEKDLTSLGIDISIPEC 292
Query: 1014 NNFDHQVNVPKLIPIVVXXXXXXTMEVGCASESVKDTVEVAAPKGVNDASVGKTSKKSRR 835
N D + VP+L+PI ME+ S + VE + SV K SKK ++
Sbjct: 293 NEGDEEDEVPELVPIA------SEMELN-ISNGASELVEAN-----GNGSVRKASKKCKK 340
Query: 834 AKNGLDGSNXXXXXXXXXXKGLADDVIQKTCLAVGESEEDGANANG 697
K S +AD+ I + ES NG
Sbjct: 341 VKKATRNSGKKTKKNNNAKCTVADEEID--VMVPAESASSNIEKNG 384
Score = 104 bits (259), Expect(2) = e-110
Identities = 70/156 (44%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Frame = -3
Query: 698 VQFEKVASEVGLEDVDTSLYDSPKKTIKGTLFKKRKRMRTIEGPDSC--------DPDIA 543
+QFEKVA EVGL S D PK + GT+ KKRKR + ++G S + +I
Sbjct: 401 LQFEKVAEEVGLNSDVASACDLPK--VNGTVSKKRKRGKHMDGKKSQNGEETNQGEDEID 458
Query: 542 ADAKSGEKSAKKVRFSMKNNLVWKXXXXXXXXXXXXXXSVTPRGSALKKGLSPGPIREMP 363
A AKS E S K+VRFSMKNN+VWK SVTPRGSALKKGL PGPIREMP
Sbjct: 459 ATAKSCENSTKRVRFSMKNNIVWKPHSPLPPLSLRIPPSVTPRGSALKKGLPPGPIREMP 518
Query: 362 PAT----XXXXXXXXXXXXXXXSPAIKRMRKLQKLS 267
T P +KR +KL+ S
Sbjct: 519 LMTKKVKKAKSVKKVRKVVKGMHPLVKRTKKLKSKS 554
>gb|KNA04299.1| hypothetical protein SOVF_200950 [Spinacia oleracea]
Length = 559
Score = 280 bits (717), Expect(2) = 2e-91
Identities = 175/414 (42%), Positives = 231/414 (55%), Gaps = 6/414 (1%)
Frame = -2
Query: 1908 SLIKHLGSCNKMRRDKALKLLLKIWLPSQSHLSEDDMKKLWKGLFYCLWHADKYPVQXXX 1729
SLIK L SC+ + R K+LK +L WL SQ+ +S+DD KKLWK LFYC+WH DK Q
Sbjct: 22 SLIKGLASCDTLIRSKSLKTILN-WLSSQTLVSDDDYKKLWKALFYCMWHCDKIQNQTQL 80
Query: 1728 XXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLIRRFLHSCFLLLKNN 1549
S F +TMRREW GID LRLDKFYLLIR F+ + F+L KN
Sbjct: 81 IRRLSSLLPTLPYPLSLSYFSHFLLTMRREWPGIDHLRLDKFYLLIRHFVRNLFVLFKNV 140
Query: 1548 CWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFLEEIKPFLPVSLHAL 1369
WDL +L V VLE+ F +D YHI SVF +E+KPFLPV+L L
Sbjct: 141 NWDLAILGEFVGVLEKNAFFF-VDDDGKGDNGLGNGVTYHIVSVFCDEVKPFLPVNLGVL 199
Query: 1368 DVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQKSG--EDVDFGDGT 1195
+++FRPF+ V+ +S +KVLVGK+KSNVFD L+K + L +KSG +V+ D T
Sbjct: 200 NLLFRPFIGVLSRSDNKVLVGKIKSNVFDYLIKNAKGFLG----AKKSGGSSEVNEEDDT 255
Query: 1194 LVVFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDLESSGIEILIPEV 1015
V+FGTI L MG +FY+LGSSP CLQGNRKV+F LHE+F +LEK+ + GI++ +PEV
Sbjct: 256 -VLFGTIALVMGFETRFYELGSSPACLQGNRKVIFGLHEDFSKLEKEKVALGIDVSLPEV 314
Query: 1014 NNFDHQVNVPKLIPIVVXXXXXXTMEVGCASESVKDTVEVAAPKGVNDASVGKTSKKSRR 835
+ VP L+P+ V EV +S K +N++ KKS++
Sbjct: 315 DG-----EVPLLVPMNV--------EVNEVEQSTKP---------INESKKASKEKKSKK 352
Query: 834 AKNGLDGSNXXXXXXXXXXKGLADDVIQKTCLAVGESE----EDGANANGTVRE 685
+ +GSN +D T +A ESE EDG N + E
Sbjct: 353 KRKKNEGSN--------PGGASVNDSNGDTEMANVESENTVVEDGGNTVEVINE 398
Score = 85.9 bits (211), Expect(2) = 2e-91
Identities = 51/111 (45%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Frame = -3
Query: 695 QFEKVASEVGLEDVDTSLYDSPKKT-IKGTLFKKRKRMRTIEGPDSCDPDIA-ADAKSGE 522
QFEK+A+E GL+ S +SP K + KKRKR +++ DS A + +
Sbjct: 407 QFEKIAAESGLDGDGVSALESPTKVQVSSKTAKKRKRSKSVSNADSNGVGKEEAVLNTED 466
Query: 521 KSAKKVRFSMKNNLVWKXXXXXXXXXXXXXXSVTPRGSALKKGLSPGPIRE 369
KS K+VRF+MKNN+VWK S TPRGSALKKGLSPGPIR+
Sbjct: 467 KSGKRVRFAMKNNIVWKPQNPLPPLNVRIPPSSTPRGSALKKGLSPGPIRD 517
>ref|XP_008801543.1| PREDICTED: ribosomal RNA processing protein 1 homolog B-like [Phoenix
dactylifera] gi|672163392|ref|XP_008801544.1| PREDICTED:
ribosomal RNA processing protein 1 homolog B-like
[Phoenix dactylifera] gi|672163394|ref|XP_008801545.1|
PREDICTED: ribosomal RNA processing protein 1 homolog
B-like [Phoenix dactylifera]
gi|672163396|ref|XP_008801546.1| PREDICTED: ribosomal RNA
processing protein 1 homolog B-like [Phoenix dactylifera]
gi|672163398|ref|XP_008801547.1| PREDICTED: ribosomal RNA
processing protein 1 homolog B-like [Phoenix dactylifera]
Length = 562
Score = 260 bits (665), Expect(2) = 3e-91
Identities = 158/416 (37%), Positives = 219/416 (52%), Gaps = 4/416 (0%)
Frame = -2
Query: 1920 VGGTSLIKHLGSCNKMRRDKALKLLLKIWLPSQ--SHLSEDDMKKLWKGLFYCLWHADKY 1747
+ GT++ K L SCNK RD+A++ L WLP Q + +S+ D+ K+WKGLFYC+WH+DK
Sbjct: 7 LSGTAIAKRLASCNKSTRDRAVRALTS-WLPQQLDAAVSDGDLLKIWKGLFYCVWHSDKL 65
Query: 1746 PVQXXXXXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLIRRFLHSCF 1567
PVQ F +T+RREW GID LRLDKFYLLIRR L F
Sbjct: 66 PVQIDLTNRLAYLLEALAAPLAARYFEAFILTVRREWAGIDFLRLDKFYLLIRRLLRHLF 125
Query: 1566 LLLKNNCWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFLEEIKPFLP 1387
LLL+ N WDL+L RL+ +L E + LA +YH A +FL+EIK FLP
Sbjct: 126 LLLRKNAWDLDLSARLIGILSEKSLLA-------ADKYPAQGVSYHFAEIFLDEIKEFLP 178
Query: 1386 VSLHALDVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQKSGEDVDF 1207
+++ LDV+ +PFL+V+ KS DKVL K+K NVF+ LL+ G LL+ +K+G V+
Sbjct: 179 LAVETLDVLLKPFLSVLEKSTDKVLANKIKVNVFERLLQNGVKLLD----VEKAGNQVES 234
Query: 1206 GDGTLVVFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDLESSGIEIL 1027
G FG I L + + +F+D S+ + LQGNRKV+F LHE FL+LEKDLE SG+ I
Sbjct: 235 GSDA-EKFGKIPLVLSFSKRFFDSASASETLQGNRKVLFGLHEGFLKLEKDLEKSGVHIS 293
Query: 1026 IPEVNNFDHQVNVPKLIPIVVXXXXXXTMEVGCASESVKDTVEVAAPKGVNDASVGKTSK 847
+ + N + V VP E + S + ++ G +D K K
Sbjct: 294 VQHLAN-GNSVKVP---------------EPMFSDNSEQVDADMGNGDGASDDQPLKKKK 337
Query: 846 K--SRRAKNGLDGSNXXXXXXXXXXKGLADDVIQKTCLAVGESEEDGANANGTVRE 685
K ++ K LDG+ ++ L+ +G N NG E
Sbjct: 338 KKEKKKTKKALDGTQKKNKSKKKKSLDSTTEINDAKPLSELNDLANGGNINGDATE 393
Score = 105 bits (262), Expect(2) = 3e-91
Identities = 68/151 (45%), Positives = 83/151 (54%), Gaps = 8/151 (5%)
Frame = -3
Query: 695 QFEKVASEVGLEDVDTSLYDSPKKTIKGTLFKKRKRMRTIEGPDSCD-PDIAADA---KS 528
QFEK A+E GL + L P K + T+ KKRKR ++ EG + D+ D+ KS
Sbjct: 411 QFEKAAAEAGLANDGERLNALPAKLVTDTVPKKRKRAKSAEGKATVSGTDVNGDSIAGKS 470
Query: 527 GEKSAKKVRFSMKNNLVWKXXXXXXXXXXXXXXSVTPRGSALKKGLSPGPIREMPPAT-- 354
GEKSAKKVRFSMK+NLVWK S TPRGSALKKG+ PGPI+E PP
Sbjct: 471 GEKSAKKVRFSMKSNLVWKPHSPLPPQSLRLPPSATPRGSALKKGIPPGPIKETPPTVKK 530
Query: 353 --XXXXXXXXXXXXXXXSPAIKRMRKLQKLS 267
S A+K +RKLQ+LS
Sbjct: 531 IKVKANSVKKGRKISTVSSAVKHLRKLQRLS 561
>ref|XP_009349233.1| PREDICTED: ribosomal RNA processing protein 1 homolog A-like isoform
X2 [Pyrus x bretschneideri]
Length = 408
Score = 340 bits (871), Expect = 4e-90
Identities = 193/383 (50%), Positives = 234/383 (61%), Gaps = 7/383 (1%)
Frame = -2
Query: 1950 TLKMSSEGDYVGGTSLIKHLGSCNKMRRDKALKLLLKIWLPSQSHLSEDDMKKLWKGLFY 1771
T KM + G SLIK L SCNK RD+AL++LLK WLP+Q +L +D MKKLWKGLFY
Sbjct: 13 TSKMEANTAVEAGLSLIKQLASCNKSSRDRALRVLLKTWLPAQLNLQDDHMKKLWKGLFY 72
Query: 1770 CLWHADKYPVQXXXXXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLI 1591
CLWHADK PVQ SVF TMRREW GIDALRLDKFYL I
Sbjct: 73 CLWHADKVPVQTQLIDRLSSLVLSLHLQLSLHYFSVFLHTMRREWPGIDALRLDKFYLSI 132
Query: 1590 RRFLHSCFLLLKNNCWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFL 1411
RRF+ S F L+KNN WDLEL+ RL+ VLEE TF AD NYHIASVFL
Sbjct: 133 RRFMTSFFTLMKNNLWDLELVKRLMGVLEERTFFAD-------DKCLGNGVNYHIASVFL 185
Query: 1410 EEIKPFLPVSLHALDVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQ 1231
EE++PFLP+ L+V+ F+ V K DKVL+GK+KSN+FDVLL + LLE +
Sbjct: 186 EELRPFLPIKAEVLEVLLVGFIRVSAKVPDKVLLGKIKSNLFDVLLGAAKRLLE----VK 241
Query: 1230 KSGEDVDFGDGTLVVFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDL 1051
KSGED+D D VVFGT+ L MG A+KFY+ GSSP+C QGNRKV+F+LHE FL LEK+L
Sbjct: 242 KSGEDLDSSD-EFVVFGTVALKMGFASKFYESGSSPECCQGNRKVLFSLHEEFLMLEKEL 300
Query: 1050 ESSGIEILIPEVNNFDHQVNVPKLIPIVVXXXXXXTMEV-------GCASESVKDTVEVA 892
ESSG+EI +P+V D + VP L+P+ E G A + +K +
Sbjct: 301 ESSGVEISLPDVVYHDDE-EVPDLVPLAGEEMDVSNSEPAEIVIANGSAGKRLKKCKKNE 359
Query: 891 APKGVNDASVGKTSKKSRRAKNG 823
G D K KK ++ K G
Sbjct: 360 KDTGGADTKAEKKKKKKKKNKEG 382
>ref|XP_009349232.1| PREDICTED: ribosomal RNA processing protein 1 homolog isoform X1
[Pyrus x bretschneideri]
Length = 572
Score = 340 bits (871), Expect = 4e-90
Identities = 193/383 (50%), Positives = 234/383 (61%), Gaps = 7/383 (1%)
Frame = -2
Query: 1950 TLKMSSEGDYVGGTSLIKHLGSCNKMRRDKALKLLLKIWLPSQSHLSEDDMKKLWKGLFY 1771
T KM + G SLIK L SCNK RD+AL++LLK WLP+Q +L +D MKKLWKGLFY
Sbjct: 13 TSKMEANTAVEAGLSLIKQLASCNKSSRDRALRVLLKTWLPAQLNLQDDHMKKLWKGLFY 72
Query: 1770 CLWHADKYPVQXXXXXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLI 1591
CLWHADK PVQ SVF TMRREW GIDALRLDKFYL I
Sbjct: 73 CLWHADKVPVQTQLIDRLSSLVLSLHLQLSLHYFSVFLHTMRREWPGIDALRLDKFYLSI 132
Query: 1590 RRFLHSCFLLLKNNCWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFL 1411
RRF+ S F L+KNN WDLEL+ RL+ VLEE TF AD NYHIASVFL
Sbjct: 133 RRFMTSFFTLMKNNLWDLELVKRLMGVLEERTFFAD-------DKCLGNGVNYHIASVFL 185
Query: 1410 EEIKPFLPVSLHALDVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQ 1231
EE++PFLP+ L+V+ F+ V K DKVL+GK+KSN+FDVLL + LLE +
Sbjct: 186 EELRPFLPIKAEVLEVLLVGFIRVSAKVPDKVLLGKIKSNLFDVLLGAAKRLLE----VK 241
Query: 1230 KSGEDVDFGDGTLVVFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDL 1051
KSGED+D D VVFGT+ L MG A+KFY+ GSSP+C QGNRKV+F+LHE FL LEK+L
Sbjct: 242 KSGEDLDSSD-EFVVFGTVALKMGFASKFYESGSSPECCQGNRKVLFSLHEEFLMLEKEL 300
Query: 1050 ESSGIEILIPEVNNFDHQVNVPKLIPIVVXXXXXXTMEV-------GCASESVKDTVEVA 892
ESSG+EI +P+V D + VP L+P+ E G A + +K +
Sbjct: 301 ESSGVEISLPDVVYHDDE-EVPDLVPLAGEEMDVSNSEPAEIVIANGSAGKRLKKCKKNE 359
Query: 891 APKGVNDASVGKTSKKSRRAKNG 823
G D K KK ++ K G
Sbjct: 360 KDTGGADTKAEKKKKKKKKNKEG 382
Score = 105 bits (263), Expect = 1e-19
Identities = 62/116 (53%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
Frame = -3
Query: 698 VQFEKVASEVGLEDVDTSLYDSPKKTIKGTLFKKRKRMR-TIEGPDSCDPDIAADAKSGE 522
+QFEK+A+E GL+D S D P + KG + KKRKRM+ +IE D + +AKSGE
Sbjct: 432 MQFEKIAAEAGLDDDVPSTCDMPLVSDKGPISKKRKRMKKSIEE----DAEGGTNAKSGE 487
Query: 521 KSAKKVRFSMKNNLVWKXXXXXXXXXXXXXXSVTPRGSALKKGLSPGPIREMPPAT 354
KSA+KV+FSMKNNLVWK S TPRGSALKKG+ PGPI EMP T
Sbjct: 488 KSARKVKFSMKNNLVWKPQTPLPPQDLRLPPSATPRGSALKKGVPPGPIWEMPTPT 543
>ref|XP_009346032.1| PREDICTED: ribosomal RNA processing protein 1 homolog B-like [Pyrus x
bretschneideri]
Length = 557
Score = 338 bits (868), Expect = 9e-90
Identities = 189/378 (50%), Positives = 240/378 (63%)
Frame = -2
Query: 1941 MSSEGDYVGGTSLIKHLGSCNKMRRDKALKLLLKIWLPSQSHLSEDDMKKLWKGLFYCLW 1762
M ++ G SLIK L SC+K RD+AL++LLK WLP+Q ++ +DDM+KLWKGLFYCLW
Sbjct: 1 MEADTAVEAGLSLIKQLASCDKSSRDRALRVLLKTWLPAQLNVQDDDMRKLWKGLFYCLW 60
Query: 1761 HADKYPVQXXXXXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLIRRF 1582
HADK PVQ SVF +TMRREW+GIDALRLDKFYL IRRF
Sbjct: 61 HADKVPVQTQLIDRLSALVLSLHLPLSLHYFSVFLLTMRREWSGIDALRLDKFYLSIRRF 120
Query: 1581 LHSCFLLLKNNCWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFLEEI 1402
+ S F L++NN WDLEL+ RL+ VLEE TF AD NYHIASVFLEE+
Sbjct: 121 MTSFFTLMRNNLWDLELVKRLMGVLEERTFFAD-------DKCLGNGVNYHIASVFLEEL 173
Query: 1401 KPFLPVSLHALDVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQKSG 1222
+PFLP+ L+V+ F+ V + DKVL+GK+KSN+FDVLL G+ LLE +KSG
Sbjct: 174 RPFLPLKADVLEVLLVGFIRVSAQVSDKVLLGKIKSNMFDVLLGAGKRLLE----VKKSG 229
Query: 1221 EDVDFGDGTLVVFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDLESS 1042
+DV+ GD +VVFGTI L MG A+KFY+ GSSP+C QGNRKV+F LHE F++LEK+LESS
Sbjct: 230 DDVELGD-EVVVFGTIALKMGFASKFYESGSSPECCQGNRKVLFGLHEGFMKLEKELESS 288
Query: 1041 GIEILIPEVNNFDHQVNVPKLIPIVVXXXXXXTMEVGCASESVKDTVEVAAPKGVNDASV 862
GIEI P+V D + VP L+P+ SE + + A + + S
Sbjct: 289 GIEISFPDVVYQDDE-EVPNLVPL--------------DSEEMDVSKSEPADAVMANGSA 333
Query: 861 GKTSKKSRRAKNGLDGSN 808
GK KK ++ G G+N
Sbjct: 334 GKRLKKCKKNDKGTGGAN 351
Score = 108 bits (271), Expect = 2e-20
Identities = 66/141 (46%), Positives = 83/141 (58%)
Frame = -3
Query: 698 VQFEKVASEVGLEDVDTSLYDSPKKTIKGTLFKKRKRMRTIEGPDSCDPDIAADAKSGEK 519
+QFEK+A+E GL+D S D P + KG + KKRKRM+ ++ + +AKSGEK
Sbjct: 417 MQFEKIAAEAGLDDDVPSACDLPTVSDKGPISKKRKRMKKSVEEEA---EGGTNAKSGEK 473
Query: 518 SAKKVRFSMKNNLVWKXXXXXXXXXXXXXXSVTPRGSALKKGLSPGPIREMPPATXXXXX 339
SAKKV+FSMKNNLVWK S TPRGSALKKG+ PGPIREMP T
Sbjct: 474 SAKKVKFSMKNNLVWKPQSPLPPQDLRLPPSATPRGSALKKGVPPGPIREMPSPT-KKVK 532
Query: 338 XXXXXXXXXXSPAIKRMRKLQ 276
A+KR++KL+
Sbjct: 533 MVRVVAVKKARKAVKRIKKLK 553
>gb|KFK26287.1| hypothetical protein AALP_AA8G228200 [Arabis alpina]
Length = 537
Score = 283 bits (723), Expect(2) = 1e-89
Identities = 161/366 (43%), Positives = 218/366 (59%)
Frame = -2
Query: 1908 SLIKHLGSCNKMRRDKALKLLLKIWLPSQSHLSEDDMKKLWKGLFYCLWHADKYPVQXXX 1729
SLIK L SC + RD++L+ +L+ WLP Q+ +++DDMKKLW+G+FYC WHADK Q
Sbjct: 22 SLIKKLASCKQTIRDRSLRTVLRTWLPEQTEIADDDMKKLWQGIFYCFWHADKSLYQSEL 81
Query: 1728 XXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLIRRFLHSCFLLLKNN 1549
+VF TMRREW+ ID LRLDKFYLLIR+FLH F LL +N
Sbjct: 82 VDRLSSALQSLPLPLSLHYFTVFLFTMRREWSRIDRLRLDKFYLLIRKFLHGFFTLLDSN 141
Query: 1548 CWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFLEEIKPFLPVSLHAL 1369
WDLE RL+ VL +GTFLA+ NYHIAS F+EE++ FLP+ L
Sbjct: 142 SWDLEFTQRLMGVLFDGTFLAN-------DKLQGNGVNYHIASAFVEELRSFLPLKKEVL 194
Query: 1368 DVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQKSGEDVDFGDGTLV 1189
+++F PF+ V+G DKVLV K+KSN+FD LLK G+ LL+ +KSG D D +V
Sbjct: 195 ELLFVPFVKVLGVVSDKVLVVKIKSNMFDELLKMGKKLLD----VKKSGNDAVSEDDDVV 250
Query: 1188 VFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDLESSGIEILIPEVNN 1009
V G+I L+M A +FY++GSS DC QGNRK +F LH FL+LEKD+ SS IE+ I E +
Sbjct: 251 VLGSIALSMEFAKRFYEMGSSEDCHQGNRKAIFALHNEFLQLEKDMLSSSIEVSITEGSR 310
Query: 1008 FDHQVNVPKLIPIVVXXXXXXTMEVGCASESVKDTVEVAAPKGVNDASVGKTSKKSRRAK 829
P+L+P+ +E A+ V ++ E+ A + +S+ K K ++
Sbjct: 311 PRGVDKAPELVPV------SGEIEAEKAN-LVSESREIVA----SGSSLKKKKKSLKKCS 359
Query: 828 NGLDGS 811
N GS
Sbjct: 360 NAKTGS 365
Score = 77.8 bits (190), Expect(2) = 1e-89
Identities = 49/120 (40%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
Frame = -3
Query: 698 VQFEKVASEVG--LEDVDTSLYDSPKKTIKGTLFKKRKRMR------TIEGPDSCDPDIA 543
++FEK+ASE+ L + S+ + + KKRKR T D+ +P +A
Sbjct: 391 MEFEKIASEMQTTLNNEVPSVCEEAEPVSVAKKTKKRKRENKGVEQGTSVNRDAAEPSLA 450
Query: 542 ADAKSGEKSAKKVRFSMKNNLVWKXXXXXXXXXXXXXXSVTPRGSALKKGLSPGPIREMP 363
SGEKS+K+VRF+MKNNLVWK S TPRGSALKKG+ GP+R++P
Sbjct: 451 GP--SGEKSSKRVRFAMKNNLVWKPHCPLPPQDLRLPPSATPRGSALKKGIPAGPVRQLP 508
>ref|XP_009359981.1| PREDICTED: ribosomal RNA processing protein 1 homolog B-like isoform
X2 [Pyrus x bretschneideri]
Length = 408
Score = 338 bits (866), Expect = 2e-89
Identities = 192/383 (50%), Positives = 234/383 (61%), Gaps = 7/383 (1%)
Frame = -2
Query: 1950 TLKMSSEGDYVGGTSLIKHLGSCNKMRRDKALKLLLKIWLPSQSHLSEDDMKKLWKGLFY 1771
T KM ++ G SLIK L SCNK RD+AL++LLK WLP+Q +L +D MKKLWKGLFY
Sbjct: 13 TSKMEADTAVEAGLSLIKQLASCNKSSRDRALRILLKTWLPAQLNLQDDHMKKLWKGLFY 72
Query: 1770 CLWHADKYPVQXXXXXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLI 1591
CLWHADK PVQ SVF TMRREW GIDALRLDKFYL I
Sbjct: 73 CLWHADKVPVQTQLIDRLSSLVLSLHLQLSLHYFSVFLHTMRREWPGIDALRLDKFYLSI 132
Query: 1590 RRFLHSCFLLLKNNCWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFL 1411
RRF+ S F L++NN WDLEL+ RL+ VLEE TF AD NYHIASVFL
Sbjct: 133 RRFMTSFFTLMRNNLWDLELVKRLMGVLEERTFFAD-------DKCLGNGVNYHIASVFL 185
Query: 1410 EEIKPFLPVSLHALDVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQ 1231
EE++PFLP+ L+V+ F+ V K DKVL+GK+KSN+FDVLL + LLE +
Sbjct: 186 EELRPFLPIKAEVLEVLLVGFIRVSAKVPDKVLLGKIKSNLFDVLLGAAKRLLE----VK 241
Query: 1230 KSGEDVDFGDGTLVVFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDL 1051
KSGED+D D VVFGT+ L MG A+KFY+ GSSP+C QGNRKV+F LHE FL LEK+L
Sbjct: 242 KSGEDLDSSD-EFVVFGTVALKMGFASKFYESGSSPECCQGNRKVLFGLHEEFLILEKEL 300
Query: 1050 ESSGIEILIPEVNNFDHQVNVPKLIPIVVXXXXXXTMEV-------GCASESVKDTVEVA 892
ESSG+EI +P+V D + VP L+P+ E G A + +K +
Sbjct: 301 ESSGVEISLPDVVYHDDE-EVPDLVPLAGEEMDVSNSEPAEIVIANGSAGKRLKKCKKNE 359
Query: 891 APKGVNDASVGKTSKKSRRAKNG 823
G D K KK ++ K G
Sbjct: 360 KDTGGADTKAEKKKKKKKKNKQG 382
>ref|XP_009359980.1| PREDICTED: ribosomal RNA processing protein 1 homolog A-like isoform
X1 [Pyrus x bretschneideri]
Length = 572
Score = 338 bits (866), Expect = 2e-89
Identities = 192/383 (50%), Positives = 234/383 (61%), Gaps = 7/383 (1%)
Frame = -2
Query: 1950 TLKMSSEGDYVGGTSLIKHLGSCNKMRRDKALKLLLKIWLPSQSHLSEDDMKKLWKGLFY 1771
T KM ++ G SLIK L SCNK RD+AL++LLK WLP+Q +L +D MKKLWKGLFY
Sbjct: 13 TSKMEADTAVEAGLSLIKQLASCNKSSRDRALRILLKTWLPAQLNLQDDHMKKLWKGLFY 72
Query: 1770 CLWHADKYPVQXXXXXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLI 1591
CLWHADK PVQ SVF TMRREW GIDALRLDKFYL I
Sbjct: 73 CLWHADKVPVQTQLIDRLSSLVLSLHLQLSLHYFSVFLHTMRREWPGIDALRLDKFYLSI 132
Query: 1590 RRFLHSCFLLLKNNCWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFL 1411
RRF+ S F L++NN WDLEL+ RL+ VLEE TF AD NYHIASVFL
Sbjct: 133 RRFMTSFFTLMRNNLWDLELVKRLMGVLEERTFFAD-------DKCLGNGVNYHIASVFL 185
Query: 1410 EEIKPFLPVSLHALDVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQ 1231
EE++PFLP+ L+V+ F+ V K DKVL+GK+KSN+FDVLL + LLE +
Sbjct: 186 EELRPFLPIKAEVLEVLLVGFIRVSAKVPDKVLLGKIKSNLFDVLLGAAKRLLE----VK 241
Query: 1230 KSGEDVDFGDGTLVVFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDL 1051
KSGED+D D VVFGT+ L MG A+KFY+ GSSP+C QGNRKV+F LHE FL LEK+L
Sbjct: 242 KSGEDLDSSD-EFVVFGTVALKMGFASKFYESGSSPECCQGNRKVLFGLHEEFLILEKEL 300
Query: 1050 ESSGIEILIPEVNNFDHQVNVPKLIPIVVXXXXXXTMEV-------GCASESVKDTVEVA 892
ESSG+EI +P+V D + VP L+P+ E G A + +K +
Sbjct: 301 ESSGVEISLPDVVYHDDE-EVPDLVPLAGEEMDVSNSEPAEIVIANGSAGKRLKKCKKNE 359
Query: 891 APKGVNDASVGKTSKKSRRAKNG 823
G D K KK ++ K G
Sbjct: 360 KDTGGADTKAEKKKKKKKKNKQG 382
Score = 106 bits (265), Expect = 8e-20
Identities = 61/115 (53%), Positives = 73/115 (63%)
Frame = -3
Query: 698 VQFEKVASEVGLEDVDTSLYDSPKKTIKGTLFKKRKRMRTIEGPDSCDPDIAADAKSGEK 519
+QFEK+A+E GL+D S D P + KG + KKRKRM+ D+ + +AKSGEK
Sbjct: 432 IQFEKIAAEAGLDDDVPSAGDLPLVSDKGPISKKRKRMKKSVEEDA---EGGTNAKSGEK 488
Query: 518 SAKKVRFSMKNNLVWKXXXXXXXXXXXXXXSVTPRGSALKKGLSPGPIREMPPAT 354
SAKKV+FSMKNNLVWK S TPRGSALKKG+ PGPI EMP T
Sbjct: 489 SAKKVKFSMKNNLVWKPQTPLPPQDLRLPPSATPRGSALKKGVPPGPIWEMPTPT 543
>ref|XP_008223829.1| PREDICTED: ribosomal RNA processing protein 1 homolog [Prunus mume]
Length = 572
Score = 336 bits (861), Expect = 6e-89
Identities = 190/378 (50%), Positives = 235/378 (62%), Gaps = 7/378 (1%)
Frame = -2
Query: 1941 MSSEGDYVGGTSLIKHLGSCNKMRRDKALKLLLKIWLPSQSHLSEDDMKKLWKGLFYCLW 1762
M +E G SLIK L SCNK RD+AL++LLK WLP+Q +L +D MKKLWKGLFYC+W
Sbjct: 16 MEAETATEEGLSLIKQLASCNKSGRDRALRVLLKTWLPTQLNLHDDHMKKLWKGLFYCVW 75
Query: 1761 HADKYPVQXXXXXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLIRRF 1582
HADK PVQ S F +TMRREW+GIDALRLDKFYLLIRRF
Sbjct: 76 HADKVPVQTQLIDRLSSLVLSLHLPLSIHYFSAFLLTMRREWSGIDALRLDKFYLLIRRF 135
Query: 1581 LHSCFLLLKNNCWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFLEEI 1402
+ S F L++NN WDLEL+ RL+ VLEE TF AD NYHIASVFLEE+
Sbjct: 136 MASFFALMRNNLWDLELVKRLMGVLEEVTFFAD-------DKFLGNGVNYHIASVFLEEL 188
Query: 1401 KPFLPVSLHALDVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQKSG 1222
+P+LP+ L+V+ F+ V K DKVL+GK++SN FD LL G+ LLE +K G
Sbjct: 189 RPYLPLKAEVLEVVLVSFIRVSAKVPDKVLLGKIRSNTFDALLGAGKRLLE----VKKLG 244
Query: 1221 EDVDFGDGTLVVFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDLESS 1042
EDV GD ++VFG+I LTMG ++KFY+LGSSP+C QGNRKV+F LHE FL+LEK+LESS
Sbjct: 245 EDVGSGD-EVMVFGSIALTMGFSSKFYELGSSPECCQGNRKVLFGLHEEFLKLEKELESS 303
Query: 1041 GIEILIPEVNNFDHQVNVPKLIPIVVXXXXXXTMEV-------GCASESVKDTVEVAAPK 883
GIEI IP+V D +V VP L+P+ E G A + +K
Sbjct: 304 GIEISIPDVVYNDDEV-VPTLVPLAGEEMEVGNSEAGEVVMVNGSAGKLLKKCKNREKDT 362
Query: 882 GVNDASVGKTSKKSRRAK 829
G D K KK ++ K
Sbjct: 363 GAADTKAEKKKKKKKKNK 380
Score = 103 bits (256), Expect = 8e-19
Identities = 65/141 (46%), Positives = 81/141 (57%)
Frame = -3
Query: 698 VQFEKVASEVGLEDVDTSLYDSPKKTIKGTLFKKRKRMRTIEGPDSCDPDIAADAKSGEK 519
+QFEK+A+E GL+ S D P + KG + KKRKR++ D + +AKSGEK
Sbjct: 432 MQFEKIAAEAGLDGDVPSACDLPTASDKGPVSKKRKRVKKAVEEDV---EGGTNAKSGEK 488
Query: 518 SAKKVRFSMKNNLVWKXXXXXXXXXXXXXXSVTPRGSALKKGLSPGPIREMPPATXXXXX 339
SAKKV+FSMK+NLVWK S TPRGSALKKG+ PGPIREMP T
Sbjct: 489 SAKKVKFSMKSNLVWKPQSPLPPQDLRVPPSATPRGSALKKGVPPGPIREMPLPT-KKVK 547
Query: 338 XXXXXXXXXXSPAIKRMRKLQ 276
AIKR++KL+
Sbjct: 548 MVRVVTAKKARKAIKRIKKLK 568
>ref|XP_010927061.1| PREDICTED: ribosomal RNA processing protein 1 homolog [Elaeis
guineensis] gi|743803935|ref|XP_010927062.1| PREDICTED:
ribosomal RNA processing protein 1 homolog [Elaeis
guineensis]
Length = 564
Score = 260 bits (665), Expect(2) = 8e-89
Identities = 158/414 (38%), Positives = 222/414 (53%), Gaps = 2/414 (0%)
Frame = -2
Query: 1920 VGGTSLIKHLGSCNKMRRDKALKLLLKIWLPSQ--SHLSEDDMKKLWKGLFYCLWHADKY 1747
+ G ++ K L SCNK RD+A++ L WLP Q + +S+ D+ K+WKGLFYC+WH+DK
Sbjct: 6 LSGGTIAKRLASCNKSIRDRAVRALTT-WLPQQPDATVSDGDLVKIWKGLFYCVWHSDKL 64
Query: 1746 PVQXXXXXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLIRRFLHSCF 1567
PVQ F +T+RREW+GID LRLDKFYLLIRRFL F
Sbjct: 65 PVQVDLINCLASLLEALPAPLAARYFEAFVLTVRREWSGIDFLRLDKFYLLIRRFLRHLF 124
Query: 1566 LLLKNNCWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFLEEIKPFLP 1387
LLL+ N WDL++ RL+ +L E + LA +YH A +FL+EIK FLP
Sbjct: 125 LLLRKNAWDLDISTRLMGILSEKSLLA-------ADKYPAQGVSYHFAEIFLDEIKEFLP 177
Query: 1386 VSLHALDVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQKSGEDVDF 1207
+++ LDV+ +PFL+V+ KS DKVLV K+K NVF+ LL+ G LL+ +K+G V+
Sbjct: 178 LAVEPLDVLLKPFLSVLEKSSDKVLVNKIKVNVFERLLQNGVKLLD----VEKAGNQVES 233
Query: 1206 GDGTLVVFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDLESSGIEIL 1027
G FG I L + + F D S+ + LQGNRKV+F LHE FL+LEKDLE SG+ I
Sbjct: 234 GSDA-DKFGKIPLVLSFSKGFLDSASASETLQGNRKVLFGLHEGFLKLEKDLEKSGVHIS 292
Query: 1026 IPEVNNFDHQVNVPKLIPIVVXXXXXXTMEVGCASESVKDTVEVAAPKGVNDASVGKTSK 847
+P + N + V VP+ PI +++G + + D + K K K
Sbjct: 293 VPHLAN-GNSVKVPE--PIFSENSEQADLDMG-SGDGASDDQPLNKQK--------KKKK 340
Query: 846 KSRRAKNGLDGSNXXXXXXXXXXKGLADDVIQKTCLAVGESEEDGANANGTVRE 685
+ ++ K DG+ ++ L+ +G N NG E
Sbjct: 341 EKKKTKKASDGTKKKNKSKKKKSLDSTTEINDAKPLSEVNDLANGGNINGDATE 394
Score = 97.4 bits (241), Expect(2) = 8e-89
Identities = 64/154 (41%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Frame = -3
Query: 695 QFEKVASEVGLEDVDTSLYDSPKKTIKGTLFKKRKRMR-------TIEGPDSCDPDIAAD 537
QFEK A+E GL + + P + ++ KKRK+ T++G D+ IA
Sbjct: 412 QFEKAAAEAGLANDSKRVSTLPATLVTDSVPKKRKKRAKTAEGKTTVKGSDANGESIAG- 470
Query: 536 AKSGEKSAKKVRFSMKNNLVWKXXXXXXXXXXXXXXSVTPRGSALKKGLSPGPIREMPPA 357
KSGEKSAKKVRFSMKNNLVWK S TPRGSA+KKG+ PGPI+E PP
Sbjct: 471 -KSGEKSAKKVRFSMKNNLVWKPHSPLPPQSLRLPPSATPRGSAMKKGIPPGPIKETPPT 529
Query: 356 T----XXXXXXXXXXXXXXXSPAIKRMRKLQKLS 267
S A+K +R+LQ LS
Sbjct: 530 VKKIKVKANSVKKGRKVSTVSSAVKHLRRLQSLS 563
>ref|XP_008378895.1| PREDICTED: ribosomal RNA processing protein 1 homolog B-like isoform
X2 [Malus domestica]
Length = 393
Score = 333 bits (853), Expect = 5e-88
Identities = 190/375 (50%), Positives = 233/375 (62%), Gaps = 7/375 (1%)
Frame = -2
Query: 1914 GTSLIKHLGSCNKMRRDKALKLLLKIWLPSQSHLSEDDMKKLWKGLFYCLWHADKYPVQX 1735
G SLIK L SCNK RD+AL++LLK WLP+Q +L +D MKKLWKGLFYCLWHADK PVQ
Sbjct: 10 GLSLIKQLASCNKSSRDRALRVLLKTWLPAQLNLQDDHMKKLWKGLFYCLWHADKVPVQT 69
Query: 1734 XXXXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLIRRFLHSCFLLLK 1555
SVF +TMRREW GID LRLDKFYL IRRF+ S F L++
Sbjct: 70 QLIDRLSSLVFSLHLPLSLHYFSVFLLTMRREWPGIDVLRLDKFYLSIRRFMTSFFTLMR 129
Query: 1554 NNCWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFLEEIKPFLPVSLH 1375
NN WDLEL+ RL+ VLEE F AD NYHIASVFLEE++PFLP+
Sbjct: 130 NNLWDLELVKRLMGVLEERAFFAD-------DKCLGNGVNYHIASVFLEELRPFLPIKAE 182
Query: 1374 ALDVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQKSGEDVDFGDGT 1195
L+V+ F+ V+ K DKVL+GK+KSN+FDVLL G+ LLE +KSGED+D D
Sbjct: 183 VLEVLLVGFIRVIAKVPDKVLLGKIKSNLFDVLLGAGKRLLE----VKKSGEDLDSSD-E 237
Query: 1194 LVVFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDLESSGIEILIPEV 1015
VV GTI L MG A+KFY+ GSSP+C QGNRKV+F LHE FL LEK+LESSG+EI +P+V
Sbjct: 238 FVVCGTIALKMGFASKFYESGSSPECCQGNRKVLFGLHEEFLMLEKELESSGVEISLPDV 297
Query: 1014 NNFDHQVNVPKLIPIVVXXXXXXTMEV-------GCASESVKDTVEVAAPKGVNDASVGK 856
D + VP L+P+ E G A + +K + G D K
Sbjct: 298 VYHDDE-EVPDLVPLAGEEMDVSNSEPAEIVIANGSAGKRLKKCKKNEKDTGGADTKAEK 356
Query: 855 TSKKSRRAKNGLDGS 811
KK +++K G +GS
Sbjct: 357 KKKKKKKSK-GENGS 370
>ref|XP_008378894.1| PREDICTED: ribosomal RNA processing protein 1 homolog isoform X1
[Malus domestica]
Length = 557
Score = 333 bits (853), Expect = 5e-88
Identities = 190/375 (50%), Positives = 233/375 (62%), Gaps = 7/375 (1%)
Frame = -2
Query: 1914 GTSLIKHLGSCNKMRRDKALKLLLKIWLPSQSHLSEDDMKKLWKGLFYCLWHADKYPVQX 1735
G SLIK L SCNK RD+AL++LLK WLP+Q +L +D MKKLWKGLFYCLWHADK PVQ
Sbjct: 10 GLSLIKQLASCNKSSRDRALRVLLKTWLPAQLNLQDDHMKKLWKGLFYCLWHADKVPVQT 69
Query: 1734 XXXXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLIRRFLHSCFLLLK 1555
SVF +TMRREW GID LRLDKFYL IRRF+ S F L++
Sbjct: 70 QLIDRLSSLVFSLHLPLSLHYFSVFLLTMRREWPGIDVLRLDKFYLSIRRFMTSFFTLMR 129
Query: 1554 NNCWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFLEEIKPFLPVSLH 1375
NN WDLEL+ RL+ VLEE F AD NYHIASVFLEE++PFLP+
Sbjct: 130 NNLWDLELVKRLMGVLEERAFFAD-------DKCLGNGVNYHIASVFLEELRPFLPIKAE 182
Query: 1374 ALDVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQKSGEDVDFGDGT 1195
L+V+ F+ V+ K DKVL+GK+KSN+FDVLL G+ LLE +KSGED+D D
Sbjct: 183 VLEVLLVGFIRVIAKVPDKVLLGKIKSNLFDVLLGAGKRLLE----VKKSGEDLDSSD-E 237
Query: 1194 LVVFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDLESSGIEILIPEV 1015
VV GTI L MG A+KFY+ GSSP+C QGNRKV+F LHE FL LEK+LESSG+EI +P+V
Sbjct: 238 FVVCGTIALKMGFASKFYESGSSPECCQGNRKVLFGLHEEFLMLEKELESSGVEISLPDV 297
Query: 1014 NNFDHQVNVPKLIPIVVXXXXXXTMEV-------GCASESVKDTVEVAAPKGVNDASVGK 856
D + VP L+P+ E G A + +K + G D K
Sbjct: 298 VYHDDE-EVPDLVPLAGEEMDVSNSEPAEIVIANGSAGKRLKKCKKNEKDTGGADTKAEK 356
Query: 855 TSKKSRRAKNGLDGS 811
KK +++K G +GS
Sbjct: 357 KKKKKKKSK-GENGS 370
Score = 104 bits (259), Expect = 4e-19
Identities = 60/115 (52%), Positives = 72/115 (62%)
Frame = -3
Query: 698 VQFEKVASEVGLEDVDTSLYDSPKKTIKGTLFKKRKRMRTIEGPDSCDPDIAADAKSGEK 519
+QFEK+A+E GL+D S D P + KG + KKRKR + D+ + +AKSGEK
Sbjct: 417 MQFEKIAAEAGLDDDVPSACDLPTVSEKGPISKKRKRTKKSVEEDA---EGGTNAKSGEK 473
Query: 518 SAKKVRFSMKNNLVWKXXXXXXXXXXXXXXSVTPRGSALKKGLSPGPIREMPPAT 354
SAKKV+FSMKNNLVWK S TPRGSALKKG+ PGPI EMP T
Sbjct: 474 SAKKVKFSMKNNLVWKPQAPLPPQDLRLPPSATPRGSALKKGVPPGPIWEMPTPT 528
>ref|XP_008382726.1| PREDICTED: ribosomal RNA processing protein 1 homolog A-like [Malus
domestica]
Length = 556
Score = 332 bits (850), Expect = 1e-87
Identities = 187/378 (49%), Positives = 237/378 (62%)
Frame = -2
Query: 1941 MSSEGDYVGGTSLIKHLGSCNKMRRDKALKLLLKIWLPSQSHLSEDDMKKLWKGLFYCLW 1762
M ++ G SLIK L SC+K RD+AL++LLK WLP+Q ++ +D M+KLWKGLFYCLW
Sbjct: 1 MEADTAVEAGLSLIKQLASCDKSSRDRALRVLLKTWLPAQLNVQDDHMRKLWKGLFYCLW 60
Query: 1761 HADKYPVQXXXXXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLIRRF 1582
H+DK PVQ SVF +TMRREW GIDALRLDKFYL IRRF
Sbjct: 61 HSDKVPVQTQLIDRLSALVLSLHLPLSLHYFSVFLLTMRREWPGIDALRLDKFYLSIRRF 120
Query: 1581 LHSCFLLLKNNCWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFLEEI 1402
+ S F L++NN WDLEL+ RL+ VLEE TF AD NYHIASVFLEE+
Sbjct: 121 MTSFFTLMRNNLWDLELVKRLMGVLEERTFFAD-------DKCLGNGVNYHIASVFLEEL 173
Query: 1401 KPFLPVSLHALDVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQKSG 1222
+PFLP+ L+V+ F+ V + DKVL+GK+KSN+FDVLL G+ LLE +KSG
Sbjct: 174 RPFLPLKADVLEVLXVGFIRVSAQVPDKVLLGKIKSNMFDVLLGAGKRLLE----VKKSG 229
Query: 1221 EDVDFGDGTLVVFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDLESS 1042
EDVD GD +VVFGTI L MG A KFY+ GSSP+C QGNRKV+F LHE F++LEK+LESS
Sbjct: 230 EDVDLGD-EVVVFGTIXLKMGFAGKFYESGSSPECCQGNRKVLFGLHEGFMKLEKELESS 288
Query: 1041 GIEILIPEVNNFDHQVNVPKLIPIVVXXXXXXTMEVGCASESVKDTVEVAAPKGVNDASV 862
GIE P+V D + VP L+P+ SE + + A + + S
Sbjct: 289 GIEXSFPDVVYQDDE-EVPNLVPL--------------DSEEMDVSKSEPADVVMANGSA 333
Query: 861 GKTSKKSRRAKNGLDGSN 808
GK KK ++ + G G++
Sbjct: 334 GKXLKKCKKNEKGTGGAD 351
Score = 108 bits (271), Expect = 2e-20
Identities = 66/141 (46%), Positives = 83/141 (58%)
Frame = -3
Query: 698 VQFEKVASEVGLEDVDTSLYDSPKKTIKGTLFKKRKRMRTIEGPDSCDPDIAADAKSGEK 519
+QFEK+A+E GL+D S D P + KG + KKRKRM+ ++ + +AKSGEK
Sbjct: 416 MQFEKIAAEAGLDDDVPSACDLPTVSDKGPISKKRKRMKKSVEKEA---EGGTNAKSGEK 472
Query: 518 SAKKVRFSMKNNLVWKXXXXXXXXXXXXXXSVTPRGSALKKGLSPGPIREMPPATXXXXX 339
SAKKV+FSMKNNLVWK S TPRGSALKKG+ PGPIREMP T
Sbjct: 473 SAKKVKFSMKNNLVWKPQSPLPPQDLRLPPSATPRGSALKKGVPPGPIREMPSPT-KKVK 531
Query: 338 XXXXXXXXXXSPAIKRMRKLQ 276
A+KR++KL+
Sbjct: 532 MVRVVAVKKARKAVKRIKKLK 552
>ref|XP_008450836.1| PREDICTED: ribosomal RNA processing protein 1 homolog B isoform X2
[Cucumis melo]
Length = 393
Score = 330 bits (847), Expect = 2e-87
Identities = 192/374 (51%), Positives = 228/374 (60%)
Frame = -2
Query: 1932 EGDYVGGTSLIKHLGSCNKMRRDKALKLLLKIWLPSQSHLSEDDMKKLWKGLFYCLWHAD 1753
EGD TSL+K L S NK RDK L++++K WLP+Q+ LS+ DMKKLWKGLFYC+WHAD
Sbjct: 6 EGDQ-NFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHAD 64
Query: 1752 KYPVQXXXXXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLIRRFLHS 1573
K PVQ SVF +TMRREW GIDALRLDKFYLLIRRFLH
Sbjct: 65 KVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQ 124
Query: 1572 CFLLLKNNCWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFLEEIKPF 1393
F LLK + WDLEL LV VLEE F D NY IASVFLEE++PF
Sbjct: 125 FFALLKKHSWDLELCRCLVQVLEERVFFTD-------DKFHGNGVNYQIASVFLEELRPF 177
Query: 1392 LPVSLHALDVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQKSGEDV 1213
LP+ +DV+F+PFL M K DKVL GK+KSN+FDV+LK G+ LLE R K G+D+
Sbjct: 178 LPLQKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESR----KRGDDI 233
Query: 1212 DFGDGTLVVFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDLESSGIE 1033
D GD T V+GTI LT + FY+LGSSPDC QGNRKV+F +HE F +LEKD SSGIE
Sbjct: 234 DSGDDT-AVYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIE 292
Query: 1032 ILIPEVNNFDHQVNVPKLIPIVVXXXXXXTMEVGCASESVKDTVEVAAPKGVNDASVGKT 853
I P++ D VP L+PI+ E SE V+V A S K
Sbjct: 293 ISFPDLQEQDGD-EVPTLVPIL--------SEEEAPSEISMVDVDVDA------ESTDKA 337
Query: 852 SKKSRRAKNGLDGS 811
KK +R+K DGS
Sbjct: 338 LKKQKRSKKATDGS 351
>ref|XP_008450828.1| PREDICTED: ribosomal RNA processing protein 1 homolog isoform X1
[Cucumis melo]
Length = 566
Score = 330 bits (847), Expect = 2e-87
Identities = 192/374 (51%), Positives = 228/374 (60%)
Frame = -2
Query: 1932 EGDYVGGTSLIKHLGSCNKMRRDKALKLLLKIWLPSQSHLSEDDMKKLWKGLFYCLWHAD 1753
EGD TSL+K L S NK RDK L++++K WLP+Q+ LS+ DMKKLWKGLFYC+WHAD
Sbjct: 6 EGDQ-NFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHAD 64
Query: 1752 KYPVQXXXXXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLIRRFLHS 1573
K PVQ SVF +TMRREW GIDALRLDKFYLLIRRFLH
Sbjct: 65 KVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQ 124
Query: 1572 CFLLLKNNCWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFLEEIKPF 1393
F LLK + WDLEL LV VLEE F D NY IASVFLEE++PF
Sbjct: 125 FFALLKKHSWDLELCRCLVQVLEERVFFTD-------DKFHGNGVNYQIASVFLEELRPF 177
Query: 1392 LPVSLHALDVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQKSGEDV 1213
LP+ +DV+F+PFL M K DKVL GK+KSN+FDV+LK G+ LLE R K G+D+
Sbjct: 178 LPLQKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESR----KRGDDI 233
Query: 1212 DFGDGTLVVFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDLESSGIE 1033
D GD T V+GTI LT + FY+LGSSPDC QGNRKV+F +HE F +LEKD SSGIE
Sbjct: 234 DSGDDT-AVYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIE 292
Query: 1032 ILIPEVNNFDHQVNVPKLIPIVVXXXXXXTMEVGCASESVKDTVEVAAPKGVNDASVGKT 853
I P++ D VP L+PI+ E SE V+V A S K
Sbjct: 293 ISFPDLQEQDGD-EVPTLVPIL--------SEEEAPSEISMVDVDVDA------ESTDKA 337
Query: 852 SKKSRRAKNGLDGS 811
KK +R+K DGS
Sbjct: 338 LKKQKRSKKATDGS 351
Score = 85.5 bits (210), Expect = 2e-13
Identities = 56/123 (45%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Frame = -3
Query: 698 VQFEKVASEVGLEDVDTSLYDSPKKTIKGTLFKKRKRMRTIEGPDSCDPDIAADA----- 534
+QFEKVA+E D S P + G++ KKRKR + ++ D + ++A
Sbjct: 417 MQFEKVAAEADFGDSIVS----PVISTNGSV-KKRKRAKNVDELQKHDVALPSEAQAEGN 471
Query: 533 ---KSGEKSAKKVRFSMKNNLVWKXXXXXXXXXXXXXXSVTPRGSALKKGLSPGPIREMP 363
KS EKS KKVRFSMKNNLVWK SVTPRGSALKKG+ PGPI E P
Sbjct: 472 TAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFP 531
Query: 362 PAT 354
T
Sbjct: 532 ATT 534
>ref|XP_009401563.1| PREDICTED: ribosomal RNA processing protein 1 homolog [Musa acuminata
subsp. malaccensis]
Length = 554
Score = 253 bits (647), Expect(2) = 1e-86
Identities = 159/416 (38%), Positives = 224/416 (53%), Gaps = 4/416 (0%)
Frame = -2
Query: 1920 VGGTSLIKHLGSCNKMRRDKALKLLLKIWLPSQSH--LSEDDMKKLWKGLFYCLWHADKY 1747
+ G + K L SCNK RD+A+++L WL QS +S+ D+ K+WKG+FYC+WHADK
Sbjct: 5 LSGADIAKRLASCNKAARDRAVRVLSS-WLCRQSDDAVSDADLAKIWKGIFYCVWHADKL 63
Query: 1746 PVQXXXXXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLIRRFLHSCF 1567
PVQ F +T+RREW+GID LRLDKFYLLIRRFL F
Sbjct: 64 PVQADLAGRLATLLESVSAPLAARYFEAFLLTIRREWSGIDFLRLDKFYLLIRRFLCHAF 123
Query: 1566 LLLKNNCWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFLEEIKPFLP 1387
LLL+ N WD EL RL +L E + L+ NYH+A VFL+EI+ LP
Sbjct: 124 LLLRKNAWDPELTARLTGILLEKSLLS-------ADNYPANGVNYHVAEVFLDEIRDLLP 176
Query: 1386 VSLHALDVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQKSGEDVDF 1207
+++ LD++ PF++V+ KS DKVLV K+K NVFD LL+ GR LL +K+G+ VD
Sbjct: 177 LAVETLDLMLNPFVSVLKKSADKVLVNKIKINVFDRLLENGRKLLN----LEKAGDKVDS 232
Query: 1206 GDGTLVVFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDLESSGIEIL 1027
G+ + G + L + + KF+D S+ + LQGNRK++F LHE+FL+LE DL+ SGI I
Sbjct: 233 GN-EVEKLGKVALLLAFSKKFFDSASASETLQGNRKILFLLHEDFLKLENDLDKSGIHIS 291
Query: 1026 IPEVNNFDHQVNVPKLIPIVVXXXXXXTMEVGCASESVKDTVEVAAPKGVNDA--SVGKT 853
+ + N + NV V ++ GC + D K + ++ S+ K
Sbjct: 292 VQHLENGSSE-NVSS----TVVTEMQVEVKNGC-GDGGSDDKRNKKRKSLKESSDSIKKK 345
Query: 852 SKKSRRAKNGLDGSNXXXXXXXXXXKGLADDVIQKTCLAVGESEEDGANANGTVRE 685
KKS + K+ +D + DV++ T G D + NG V E
Sbjct: 346 KKKSGKKKSSMDSV-------------MGSDVVEAT--TEGIDVVDDVSLNGDVME 386
Score = 97.1 bits (240), Expect(2) = 1e-86
Identities = 63/152 (41%), Positives = 81/152 (53%), Gaps = 8/152 (5%)
Frame = -3
Query: 695 QFEKVASEVGLEDVDTSLYDSPKKTIKGTLFKKRKRMRTIEGPDSCDPDIAADA-----K 531
QFEK A+E G+ D + P + G K+R+R + + + D +A+ K
Sbjct: 404 QFEKAAAEAGMTDDNDQFSVMPATPVAGAALKRRRRAKNADVKVN-DKRSSANGEGNVEK 462
Query: 530 SGEKSAKKVRFSMKNNLVWKXXXXXXXXXXXXXXSVTPRGSALKKGLSPGPIREMPPA-- 357
SG+KSAKKVRFSMK+NLVWK SVTP+GSALK+G+ PGPIRE PP
Sbjct: 463 SGDKSAKKVRFSMKSNLVWKPNNPLPPHSLRLPPSVTPKGSALKQGVPPGPIRETPPTIK 522
Query: 356 -TXXXXXXXXXXXXXXXSPAIKRMRKLQKLSI 264
SPAIKR+RKLQ L +
Sbjct: 523 KIKVKASSVKKSRKGVKSPAIKRLRKLQSLLV 554
>ref|XP_012449609.1| PREDICTED: ribosomal RNA processing protein 1 homolog [Gossypium
raimondii] gi|763797024|gb|KJB63979.1| hypothetical
protein B456_010G027600 [Gossypium raimondii]
gi|763797025|gb|KJB63980.1| hypothetical protein
B456_010G027600 [Gossypium raimondii]
Length = 559
Score = 328 bits (840), Expect = 2e-86
Identities = 181/363 (49%), Positives = 234/363 (64%), Gaps = 1/363 (0%)
Frame = -2
Query: 1914 GTSLIKHLGSCNKMRRDKALKLLLKIWLPSQSHLSEDDMKKLWKGLFYCLWHADKYPVQX 1735
G +LIK L +C+K RD+A++ LL WLPSQS +S+++MK+LWKGLFYC+WHADK P Q
Sbjct: 9 GPTLIKQLAACDKSSRDRAVRSLLDGWLPSQSEVSDEEMKRLWKGLFYCVWHADKLPAQT 68
Query: 1734 XXXXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLIRRFLHSCFLLLK 1555
SVF +TMRREWTGID LRLDKFYLLIRRFL+ F +LK
Sbjct: 69 DLINKLSSVLPKLEPGLSLQYFSVFLLTMRREWTGIDKLRLDKFYLLIRRFLNCFFAMLK 128
Query: 1554 NNCWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFLEEIKPFLPVSLH 1375
+ WDL+ + R + VL +GTF+AD NYHIAS+FLEEI+PF P+
Sbjct: 129 KSSWDLDFMRRSIRVLVDGTFIAD-------DKFQGNGVNYHIASIFLEEIRPFFPLRKE 181
Query: 1374 ALDVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQKSGEDVDFGDGT 1195
++V+ P + ++GK DKVLVGK++SNVFDVL+KTGR LLE + +SG++VD D
Sbjct: 182 VVEVLLEPLVGILGKVGDKVLVGKIRSNVFDVLVKTGRRLLELK----QSGDEVDESDD- 236
Query: 1194 LVVFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDLESSGIEILIPEV 1015
+VVFGTIGL MG + KFY+LGSS DC QGNRK + LHE FL+LEKDL S GI+I IPE
Sbjct: 237 VVVFGTIGLVMGFSTKFYELGSSVDCCQGNRKAVLALHEEFLKLEKDLTSLGIDISIPEG 296
Query: 1014 NNFDHQVNVPKLIPIVVXXXXXXTMEVGCASESVKDTVEVAAPKGVN-DASVGKTSKKSR 838
N + + VP+LIP+ G +V + +V P VN S K +KKS+
Sbjct: 297 NEGNEEDEVPELIPV-----------GGETDANVSN--DVLEPVEVNITGSAKKATKKSK 343
Query: 837 RAK 829
+AK
Sbjct: 344 KAK 346
Score = 94.0 bits (232), Expect = 5e-16
Identities = 61/156 (39%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Frame = -3
Query: 698 VQFEKVASEVGLEDVDTSLYDSPKKTIKGTLFKKRKRMRTIEGPDSCDPDIAADA----- 534
+QFEKVA+EVGL + D PK + G + KKRKR + + G + ++ +A
Sbjct: 405 LQFEKVAAEVGLNSDVATACDLPK--VNGAVSKKRKRAKGLNGRKPQNGELTGEADGEGD 462
Query: 533 ---KSGEKSAKKVRFSMKNNLVWKXXXXXXXXXXXXXXSVTPRGSALKKGLSPGPIREMP 363
K+ E S K+VRFSMK+NLVWK SVTPRGSALK+G+ PGPI+EM
Sbjct: 463 GTAKTCENSTKRVRFSMKSNLVWKPHSPLPPLSLRLPPSVTPRGSALKQGIPPGPIKEMA 522
Query: 362 PAT----XXXXXXXXXXXXXXXSPAIKRMRKLQKLS 267
P T P +KR +KL+ S
Sbjct: 523 PMTKKGKKAKSVKKARKVIKSMYPLVKRTKKLKSTS 558
>ref|XP_011648968.1| PREDICTED: ribosomal RNA processing protein 1 homolog B isoform X2
[Cucumis sativus]
Length = 393
Score = 327 bits (837), Expect = 4e-86
Identities = 189/377 (50%), Positives = 233/377 (61%), Gaps = 4/377 (1%)
Frame = -2
Query: 1932 EGDYVGGTSLIKHLGSCNKMRRDKALKLLLKIWLPSQSHLSEDDMKKLWKGLFYCLWHAD 1753
EGD TSL+K L S NK RDK L++++K WLP+Q+ LS+ DMKKLWKGLFYC+WHAD
Sbjct: 6 EGDQ-NFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHAD 64
Query: 1752 KYPVQXXXXXXXXXXXXXXXXXXXXXXXSVFFMTMRREWTGIDALRLDKFYLLIRRFLHS 1573
K PVQ SVF +TMRREW GIDALRLDKFYLLIRRFLH
Sbjct: 65 KVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQ 124
Query: 1572 CFLLLKNNCWDLELLDRLVAVLEEGTFLADIDXXXXXXXXXXXXXNYHIASVFLEEIKPF 1393
F LLK + WDLEL RLV VLEE + + NY IASVFLEE++PF
Sbjct: 125 FFALLKKHSWDLELCRRLVQVLEERVYFNE-------DKFHGNGVNYQIASVFLEELRPF 177
Query: 1392 LPVSLHALDVIFRPFLAVMGKSRDKVLVGKVKSNVFDVLLKTGRALLEHRVLQQKSGEDV 1213
LP+ +DV+F+PFL M K DKVL+GK+KSN+FDV+LK G+ LLE R K G+DV
Sbjct: 178 LPLQKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESR----KRGDDV 233
Query: 1212 DFGDGTLVVFGTIGLTMGLAAKFYDLGSSPDCLQGNRKVMFTLHENFLRLEKDLESSGIE 1033
D D T VV+GT+ LT + FY+LGSSPDC QGNRKV+F +HE F +LEKD SSGIE
Sbjct: 234 DSVDDT-VVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIE 292
Query: 1032 ILIPEVNNFDHQVNVPKLIP---IVVXXXXXXTMEVGCASESV-KDTVEVAAPKGVNDAS 865
I P++ D VP L+P I ++V +ES K + K D S
Sbjct: 293 ISFPDLQEQDGD-EVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGS 351
Query: 864 VGKTSKKSRRAKNGLDG 814
K +KK+++AK +G
Sbjct: 352 GKKKAKKAKKAKKTTNG 368