BLASTX nr result

ID: Cornus23_contig00002764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00002764
         (868 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23999.3| unnamed protein product [Vitis vinifera]               69   5e-09
ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydro...    69   5e-09

>emb|CBI23999.3| unnamed protein product [Vitis vinifera]
          Length = 892

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 49/119 (41%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
 Frame = -1

Query: 862  KLQPLFPPVFLVKRPHTKVMKKDGKAPLEAGELASACDHNS-CNGFAKPGFPRPNDVETK 686
            KL+PLF P FL KRP  K  K+DGKA  E  E+A+A   +S CNG AKPGFP     E  
Sbjct: 682  KLKPLFSPGFLGKRPRNKSTKRDGKASEECHEVATAGKVSSNCNGIAKPGFPHQRSGELN 741

Query: 685  VLGKPF-XXXXXXXXXXXXEQVEKCLNEDEL---------IPTESSGSFNLSNGDSNAI 539
               +               EQ +K LNEDE+         IP E  G+F  +N  SN I
Sbjct: 742  NEAQALSNYNNLPSSSFVGEQPQKSLNEDEMVSIEFSESVIPCEEDGNFVTANESSNNI 800


>ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 18 [Vitis vinifera]
          Length = 940

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 49/119 (41%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
 Frame = -1

Query: 862  KLQPLFPPVFLVKRPHTKVMKKDGKAPLEAGELASACDHNS-CNGFAKPGFPRPNDVETK 686
            KL+PLF P FL KRP  K  K+DGKA  E  E+A+A   +S CNG AKPGFP     E  
Sbjct: 758  KLKPLFSPGFLGKRPRNKSTKRDGKASEECHEVATAGKVSSNCNGIAKPGFPHQRSGELN 817

Query: 685  VLGKPF-XXXXXXXXXXXXEQVEKCLNEDEL---------IPTESSGSFNLSNGDSNAI 539
               +               EQ +K LNEDE+         IP E  G+F  +N  SN I
Sbjct: 818  NEAQALSNYNNLPSSSFVGEQPQKSLNEDEMVSIEFSESVIPCEEDGNFVTANESSNNI 876


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