BLASTX nr result
ID: Cornus23_contig00002639
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00002639
(708 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KCW89268.1| hypothetical protein EUGRSUZ_A01563 [Eucalyptus g... 94 1e-16
gb|AIJ28060.1| ribosomal protein L2 (chloroplast) [Trifolium lup... 64 1e-11
gb|KJB10645.1| hypothetical protein B456_001G213100 [Gossypium r... 61 5e-11
gb|KJB15228.1| hypothetical protein B456_002G165900 [Gossypium r... 57 8e-11
ref|YP_009176044.1| ribosomal protein L2 (chloroplast) [Ficus ra... 72 3e-10
ref|XP_010110759.1| 50S ribosomal protein L2 [Morus notabilis] g... 72 3e-10
ref|XP_010101689.1| hypothetical protein L484_006809 [Morus nota... 72 3e-10
emb|CDX91813.1| BnaC03g31150D [Brassica napus] 70 1e-09
emb|CDY21179.1| BnaA01g34100D [Brassica napus] 70 1e-09
emb|CDY28606.1| BnaA06g19320D [Brassica napus] gi|674938178|emb|... 70 1e-09
ref|YP_008592707.1| ribosomal protein L2 (chloroplast) [Berberis... 70 1e-09
ref|XP_002515004.1| 50S ribosomal protein L2, putative [Ricinus ... 69 4e-09
gb|AFS35548.1| ribosomal protein L2, partial [Fragaria pentaphylla] 68 5e-09
ref|XP_003606061.1| 50S ribosomal protein L2 [Medicago truncatul... 68 5e-09
dbj|BAS71929.1| Os01g0333432 [Oryza sativa Japonica Group] 66 2e-08
gb|AFK37971.1| unknown [Lotus japonicus] 62 3e-07
dbj|BAA04406.1| ORF63 [Pinus thunbergii] 61 6e-07
gb|AJS14460.1| ribosomal protein L2 [Ruellia breedlovei] 61 6e-07
gb|KJB08379.1| hypothetical protein B456_001G079400 [Gossypium r... 59 2e-06
tpg|DAA38481.1| TPA: hypothetical protein ZEAMMB73_861794, parti... 59 4e-06
>gb|KCW89268.1| hypothetical protein EUGRSUZ_A01563 [Eucalyptus grandis]
Length = 77
Score = 93.6 bits (231), Expect = 1e-16
Identities = 46/52 (88%), Positives = 47/52 (90%)
Frame = +3
Query: 123 TDGSYIYRIMKYHTSGYIGIQIYRITHVMIFYILGLPVPSSGLCSSCSIQTE 278
T GSYIY IMKY SGYIGIQI RITHVMIFYILGLPVPSSGLCSSCSIQT+
Sbjct: 26 TYGSYIYCIMKYSMSGYIGIQICRITHVMIFYILGLPVPSSGLCSSCSIQTK 77
>gb|AIJ28060.1| ribosomal protein L2 (chloroplast) [Trifolium lupinaster]
Length = 317
Score = 64.3 bits (155), Expect(2) = 1e-11
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -1
Query: 141 IYKIHLYRYHHLHPESRMLWKKLVQFGKGF*LIKKK 34
I IH+YRY++ HPESRMLWKKLVQFGKGF LIKKK
Sbjct: 133 IRSIHVYRYYNRHPESRMLWKKLVQFGKGFCLIKKK 168
Score = 33.1 bits (74), Expect(2) = 1e-11
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -3
Query: 52 LIDQKEESTSTDMPLGT 2
LI +KEESTSTDMPLGT
Sbjct: 164 LIKKKEESTSTDMPLGT 180
>gb|KJB10645.1| hypothetical protein B456_001G213100 [Gossypium raimondii]
Length = 236
Score = 60.1 bits (144), Expect(2) = 5e-11
Identities = 29/34 (85%), Positives = 31/34 (91%), Gaps = 1/34 (2%)
Frame = -3
Query: 100 RKPYALEEACTVWEGVL-IDQKEESTSTDMPLGT 2
R YALEEACT+WEGVL IDQKEESTST+MPLGT
Sbjct: 57 RNSYALEEACTIWEGVLIIDQKEESTSTNMPLGT 90
Score = 35.0 bits (79), Expect(2) = 5e-11
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -2
Query: 215 EDHNMSDSVDLDSYISTRVV 156
EDHNMS S DLDSYIS V+
Sbjct: 32 EDHNMSGSTDLDSYISNHVI 51
Score = 61.2 bits (147), Expect = 6e-07
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = -2
Query: 491 MEKTNLFQAPTEPEAPLVSKRGGRVIHISFD 399
MEKT LFQAPT+PEAPLVSKRGGR+IHISFD
Sbjct: 1 MEKTKLFQAPTKPEAPLVSKRGGRLIHISFD 31
>gb|KJB15228.1| hypothetical protein B456_002G165900 [Gossypium raimondii]
Length = 171
Score = 57.0 bits (136), Expect(2) = 8e-11
Identities = 32/50 (64%), Positives = 32/50 (64%)
Frame = -2
Query: 491 MEKTNLFQAPTEPEAPLVSKRGGRVIHISFDGQRRIES*AVVILKIPRGK 342
M T LFQAP EPEA LVSKR GRVIHISFDGQR PRGK
Sbjct: 1 MGMTKLFQAPIEPEASLVSKREGRVIHISFDGQR-----------FPRGK 39
Score = 37.4 bits (85), Expect(2) = 8e-11
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -3
Query: 358 RFPGGKIEMSPTLPIICG 305
RFP GKIEMSP LPIICG
Sbjct: 34 RFPRGKIEMSPILPIICG 51
>ref|YP_009176044.1| ribosomal protein L2 (chloroplast) [Ficus racemosa]
gi|944542148|ref|YP_009176068.1| ribosomal protein L2
(chloroplast) [Ficus racemosa]
gi|937500981|gb|ALI30740.1| ribosomal protein L2
(chloroplast) [Ficus racemosa]
gi|937501005|gb|ALI30764.1| ribosomal protein L2
(chloroplast) [Ficus racemosa]
Length = 315
Score = 72.0 bits (175), Expect = 3e-10
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = -3
Query: 100 RKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 2
RKPYALEEACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 146 RKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 178
>ref|XP_010110759.1| 50S ribosomal protein L2 [Morus notabilis]
gi|587941453|gb|EXC28024.1| 50S ribosomal protein L2
[Morus notabilis]
Length = 200
Score = 72.0 bits (175), Expect = 3e-10
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = -3
Query: 100 RKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 2
RKPYALEEACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 31 RKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 63
>ref|XP_010101689.1| hypothetical protein L484_006809 [Morus notabilis]
gi|587900967|gb|EXB89255.1| hypothetical protein
L484_006809 [Morus notabilis]
Length = 97
Score = 72.0 bits (175), Expect = 3e-10
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = -3
Query: 100 RKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 2
RKPYALEEACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 31 RKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 63
>emb|CDX91813.1| BnaC03g31150D [Brassica napus]
Length = 187
Score = 70.1 bits (170), Expect = 1e-09
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = -3
Query: 97 KPYALEEACTVWEGVLIDQKEESTSTDMPLGT 2
KPYALEEACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 19 KPYALEEACTVWEGVLIDQKEESTSTDMPLGT 50
>emb|CDY21179.1| BnaA01g34100D [Brassica napus]
Length = 266
Score = 70.1 bits (170), Expect = 1e-09
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = -3
Query: 97 KPYALEEACTVWEGVLIDQKEESTSTDMPLGT 2
KPYALEEACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 19 KPYALEEACTVWEGVLIDQKEESTSTDMPLGT 50
>emb|CDY28606.1| BnaA06g19320D [Brassica napus] gi|674938178|emb|CDX95206.1|
BnaC09g16640D [Brassica napus]
Length = 187
Score = 70.1 bits (170), Expect = 1e-09
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = -3
Query: 97 KPYALEEACTVWEGVLIDQKEESTSTDMPLGT 2
KPYALEEACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 19 KPYALEEACTVWEGVLIDQKEESTSTDMPLGT 50
>ref|YP_008592707.1| ribosomal protein L2 (chloroplast) [Berberis bealei]
gi|536462748|gb|AGU37113.1| ribosomal protein L2
(chloroplast) [Berberis bealei]
Length = 310
Score = 70.1 bits (170), Expect = 1e-09
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = -3
Query: 97 KPYALEEACTVWEGVLIDQKEESTSTDMPLGT 2
KPYALEEACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 142 KPYALEEACTVWEGVLIDQKEESTSTDMPLGT 173
>ref|XP_002515004.1| 50S ribosomal protein L2, putative [Ricinus communis]
gi|223546055|gb|EEF47558.1| 50S ribosomal protein L2,
putative [Ricinus communis]
Length = 111
Score = 68.6 bits (166), Expect = 4e-09
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = -3
Query: 100 RKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 2
RKPYALEEACTVWE +LIDQKEESTSTDMPLGT
Sbjct: 11 RKPYALEEACTVWEEILIDQKEESTSTDMPLGT 43
>gb|AFS35548.1| ribosomal protein L2, partial [Fragaria pentaphylla]
Length = 122
Score = 68.2 bits (165), Expect = 5e-09
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 94 PYALEEACTVWEGVLIDQKEESTSTDMPLGT 2
PYALEEACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 1 PYALEEACTVWEGVLIDQKEESTSTDMPLGT 31
>ref|XP_003606061.1| 50S ribosomal protein L2 [Medicago truncatula]
gi|355507116|gb|AES88258.1| 50S ribosomal protein L2
[Medicago truncatula]
Length = 382
Score = 68.2 bits (165), Expect = 5e-09
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 94 PYALEEACTVWEGVLIDQKEESTSTDMPLGT 2
PYALEEACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 235 PYALEEACTVWEGVLIDQKEESTSTDMPLGT 265
>dbj|BAS71929.1| Os01g0333432 [Oryza sativa Japonica Group]
Length = 85
Score = 66.2 bits (160), Expect = 2e-08
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = -2
Query: 503 RYSNMEKTNLFQAPTEPEAPLVSKRGGRVIHISFDGQR 390
RY NMEKT LF+A TEPEAPLVSKRGG+VIHI F+GQR
Sbjct: 48 RYGNMEKTKLFEACTEPEAPLVSKRGGQVIHIYFNGQR 85
>gb|AFK37971.1| unknown [Lotus japonicus]
Length = 27
Score = 62.4 bits (150), Expect = 3e-07
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = -1
Query: 132 IHLYRYHHLHPESRMLWKKLVQFGKGF 52
+HLYRYHHLHPESRMLWKKLVQFG+GF
Sbjct: 1 MHLYRYHHLHPESRMLWKKLVQFGRGF 27
>dbj|BAA04406.1| ORF63 [Pinus thunbergii]
Length = 63
Score = 61.2 bits (147), Expect = 6e-07
Identities = 37/73 (50%), Positives = 43/73 (58%)
Frame = +2
Query: 44 INQNPFPNCTSFFQSIRLSGCR**YLYRWILYISYNEVPHEWIYRNPNLPNHSCYDLLHP 223
+N+NPFPNCTS Q I+LSGC LY IL YN E +L C D LHP
Sbjct: 1 MNKNPFPNCTSLSQGIQLSGC---ILYSHILN-KYNRDEKE------HLLYSLCPDSLHP 50
Query: 224 RSSRSVIWLMFFM 262
RS S+IWL+FFM
Sbjct: 51 RSLYSIIWLIFFM 63
>gb|AJS14460.1| ribosomal protein L2 [Ruellia breedlovei]
Length = 308
Score = 61.2 bits (147), Expect = 6e-07
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = -3
Query: 85 LEEACTVWEGVLIDQKEESTSTDMPLGT 2
LEEACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 144 LEEACTVWEGVLIDQKEESTSTDMPLGT 171
>gb|KJB08379.1| hypothetical protein B456_001G079400 [Gossypium raimondii]
Length = 184
Score = 59.3 bits (142), Expect = 2e-06
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -2
Query: 491 MEKTNLFQAPTEPEAPLVSKRGGRVIHISFD 399
MEKT LFQ+P EPEAPL+SK+GGRVIHISFD
Sbjct: 1 MEKTKLFQSPAEPEAPLISKKGGRVIHISFD 31
>tpg|DAA38481.1| TPA: hypothetical protein ZEAMMB73_861794, partial [Zea mays]
Length = 137
Score = 58.5 bits (140), Expect = 4e-06
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 3 VPKGISVEVDSSF*SIKTPSQTVQASSKAYGFLDV 107
VPKGISVEVDSSF S K PSQTVQASSKAYGFLDV
Sbjct: 103 VPKGISVEVDSSFFS-KNPSQTVQASSKAYGFLDV 136