BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00002324
         (1945 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,...   697   0.0  
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,...   692   0.0  
ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,...   677   0.0  
ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,...   677   0.0  
ref|XP_011084487.1| PREDICTED: RNA polymerase sigma factor sigE,...   674   0.0  
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   672   0.0  
ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao] g...   667   0.0  
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   660   0.0  
ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prun...   657   0.0  
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr...   648   0.0  
ref|XP_008376694.1| PREDICTED: RNA polymerase sigma factor sigE,...   647   0.0  
gb|AKC88745.1| sigma factor [Melianthus villosus]                     646   0.0  
ref|XP_009368680.1| PREDICTED: RNA polymerase sigma factor sigE,...   645   0.0  
gb|AKC88737.1| sigma factor [Francoa sonchifolia]                     645   0.0  
ref|XP_009357326.1| PREDICTED: RNA polymerase sigma factor sigE,...   644   0.0  
ref|XP_008465379.1| PREDICTED: RNA polymerase sigma factor sigE,...   643   0.0  
gb|KDO56129.1| hypothetical protein CISIN_1g010092mg [Citrus sin...   642   0.0  
ref|XP_012858574.1| PREDICTED: RNA polymerase sigma factor sigE,...   642   0.0  
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   642   0.0  
ref|XP_008234778.1| PREDICTED: RNA polymerase sigma factor sigE,...   638   e-180

>ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nelumbo nucifera]
          Length = 514

 Score =  697 bits (1799), Expect = 0.0
 Identities = 371/516 (71%), Positives = 414/516 (80%), Gaps = 2/516 (0%)
 Frame = -2

Query: 1755 MGVVTVPSSASQTLLGLKARFSSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIETP 1576
            MGVVTV SS+SQT LGL +RFS +Q  LKRPLI AFK DK K ++LVT H+ I LP++TP
Sbjct: 1    MGVVTVSSSSSQTPLGLSSRFSVHQTQLKRPLILAFKTDKAKDRALVTHHEPIPLPMDTP 60

Query: 1575 KENQKRLRRVAKPLERVQAVSTDEAIPSTSELDYNEAAAKLENIYKLSPTGYVSDVEDID 1396
            KENQKRLRR  KP +RV+ V +DEA   T E+DYN+ AAKLE+IYKLSP   VSDV+D D
Sbjct: 61   KENQKRLRRATKPSKRVKVVCSDEASSCTIEMDYNDVAAKLESIYKLSPPTDVSDVDDTD 120

Query: 1395 SXXXXXXXXXXKIGTDDXXXXXXXXXXXXXXXXXXXRLTLDKRIELR-KNEKNEVFASIC 1219
                       K+G  D                   RL+LD+RI LR K E+  V  S  
Sbjct: 121  RVGRRRRRTRKKLGEADRKTGKESSDNVIRNHNKNKRLSLDRRIALRRKKEEGAVQLSGV 180

Query: 1218 KREHAEDEDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKALGQV 1039
            K    ED D  +++LV EYS S DL S DWKKMKIPPVLPSSEH WLFKLMQPM AL Q+
Sbjct: 181  KEGSKEDGD--VDKLVGEYSVSTDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMNALFQM 238

Query: 1038 NENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINKYFQE 859
             ENL  DLGREPTD ELA +TNM++ QVR+ IEVGR AR +LIKHNLRLVLFVINKYFQE
Sbjct: 239  KENLHRDLGREPTDGELADSTNMSVFQVRRCIEVGRAARNRLIKHNLRLVLFVINKYFQE 298

Query: 858  FANGA-FQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTRVPFG 682
            FANG  FQDLCQAGVKGLITAIDRFEPK+RFRLSTY LFWIRHAI+RSMT SSFTRV FG
Sbjct: 299  FANGPKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIMRSMTLSSFTRVSFG 358

Query: 681  LESVRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHARYATTQ 502
            LESVRVEIQRAKLEL+FEL+RLPTEEEII+KVGISPERYH V++ASKPV SLH+R+A TQ
Sbjct: 359  LESVRVEIQRAKLELMFELERLPTEEEIIKKVGISPERYHEVIKASKPVFSLHSRHAITQ 418

Query: 501  EEFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 322
            EEFINGITD++GVGGDKR+QPALLR+ALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
Sbjct: 419  EEFINGITDIEGVGGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 478

Query: 321  AGNLNISREMVRKHEVKALMKLKHPARVDHLREYIY 214
            AGNLNISREMVRKHEVKALMKLKHP RVD+LR YI+
Sbjct: 479  AGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYIF 514


>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  692 bits (1785), Expect = 0.0
 Identities = 368/518 (71%), Positives = 423/518 (81%), Gaps = 4/518 (0%)
 Frame = -2

Query: 1755 MGVVTVPSSAS--QTLLGLKARFSSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIE 1582
            MGVVTV SSAS  +T  GL A+FS++Q  L+RPL+ AFK DK K+ +LVT H+ I LPIE
Sbjct: 1    MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60

Query: 1581 TPKENQKRLRRVAKPLERVQAVSTDEAIPSTSELDYNEAAAKLENIYKLSPTGYVSDVED 1402
            T K+++KRLRR +KP +RV+AVSTDE  P + ELDYNEAAAKLENIYKLSP   VS+ ED
Sbjct: 61   TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAED 120

Query: 1401 IDSXXXXXXXXXXKIG-TDDXXXXXXXXXXXXXXXXXXXRLTLDKRIELRKNEKNEVFAS 1225
            ++           ++   DD                   RL+L+KRI L K ++ +  AS
Sbjct: 121  LERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVAS 180

Query: 1224 ICKREHAEDEDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKALG 1045
            I K+  +++EDE I+ LVREYS S DL+S DWKKMKIPPVLP SEH WLFKLMQPMK L 
Sbjct: 181  IQKKRDSKNEDENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGLL 240

Query: 1044 QVNENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINKYF 865
            +V +NLQ DLGREPTD ELA+A +M+ VQVR+++EVG+ AR KLIKHNLRLVLFVINKYF
Sbjct: 241  EVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKYF 300

Query: 864  QEFANGA-FQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTRVP 688
            QEFANG  FQDLCQAGVKGLITAIDRFEPK+ FRLSTY LFWIRHAI+RSMT SSFTRV 
Sbjct: 301  QEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRVS 360

Query: 687  FGLESVRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHARYAT 508
            FGLESVRVEIQRAKLELLF+LQRLPTEEEIIEKVGISPERYH VMRASK V SLHAR+AT
Sbjct: 361  FGLESVRVEIQRAKLELLFKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLSLHARHAT 420

Query: 507  TQEEFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDRTLG 328
            TQEE+INGITDV+GVGGD+ +Q ALLR+ALDDVLDSLKPKESLV+RQRYGLDGKGDRTLG
Sbjct: 421  TQEEYINGITDVEGVGGDRGRQLALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLG 480

Query: 327  EIAGNLNISREMVRKHEVKALMKLKHPARVDHLREYIY 214
            EIAGNL+ISREMVRKHEVKALMKLKHPARVD+LR+YI+
Sbjct: 481  EIAGNLSISREMVRKHEVKALMKLKHPARVDYLRQYIF 518


>ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nicotiana tomentosiformis]
          Length = 519

 Score =  677 bits (1748), Expect = 0.0
 Identities = 365/519 (70%), Positives = 414/519 (79%), Gaps = 5/519 (0%)
 Frame = -2

Query: 1755 MGVVTVPSSASQTLLGLKARFSSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIETP 1576
            MGVVTV SSAS++ LGL   FS++   LKRP++ +FK+DK K  +LV   +SI+LPIET 
Sbjct: 1    MGVVTVSSSASRSPLGLSTSFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETS 60

Query: 1575 KENQKRLRRVAKPLERVQAVSTD-EAIPSTSELDYNEAAAKLENIYKLSPTGYVSDVE-- 1405
            KEN+KR RRV+K  ERV AVS D EA PST ELDY+EAAAKLE+IYK S     SD E  
Sbjct: 61   KENEKRSRRVSKRTERVHAVSIDIEASPSTLELDYSEAAAKLESIYKRSLETDSSDTEAK 120

Query: 1404 DIDSXXXXXXXXXXKIGTDDXXXXXXXXXXXXXXXXXXXRLTLDKRIELRKNEKNEVFAS 1225
            D              I  ++                   RL LD+RI L KN++ E+ AS
Sbjct: 121  DHQIVKRRQRTRKRIIEGNEEAKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVAS 180

Query: 1224 ICKREHAED-EDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKAL 1048
              KRE  ED EDE I++LVREYS + DL S DWKKMKIPPVLPSSEH WLFKLMQPMKA+
Sbjct: 181  SQKRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAI 240

Query: 1047 GQVNENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINKY 868
             QV ENLQ+DLGREPTD E+A+ATN+   ++RKN+EVGR AR KLIKHNLRLVLFVINKY
Sbjct: 241  LQVKENLQNDLGREPTDAEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINKY 300

Query: 867  FQEFANGA-FQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTRV 691
            FQ+FANG  FQDLCQAGVKGLITAIDRFEP ++FRLSTY LFWIRHAIIRSMTTSSFT+V
Sbjct: 301  FQDFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKV 360

Query: 690  PFGLESVRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHARYA 511
            PFGLES+RVEIQ+AKL+LLFELQR+PT+EEIIE+V +SPERYH VM+ SKPV SLHAR+ 
Sbjct: 361  PFGLESIRVEIQKAKLQLLFELQRMPTDEEIIERVRLSPERYHEVMKVSKPVFSLHARHM 420

Query: 510  TTQEEFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 331
            TTQEEFINGITDVDGV G KRKQPALLR+ALDDVLDSLKPKESLVIRQRYGLDGKG+RTL
Sbjct: 421  TTQEEFINGITDVDGVDGVKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTL 480

Query: 330  GEIAGNLNISREMVRKHEVKALMKLKHPARVDHLREYIY 214
            GEIAGNLNISREMVRKHEVKALMKLKHP RVD+LR YI+
Sbjct: 481  GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYIF 519


>ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nicotiana sylvestris]
          Length = 519

 Score =  677 bits (1747), Expect = 0.0
 Identities = 364/519 (70%), Positives = 412/519 (79%), Gaps = 5/519 (0%)
 Frame = -2

Query: 1755 MGVVTVPSSASQTLLGLKARFSSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIETP 1576
            MGVVTV SSAS++ LGL  RFS++   LKRP++ +FK+DK K  +LV   +SI+LPIET 
Sbjct: 1    MGVVTVSSSASRSPLGLSTRFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETS 60

Query: 1575 KENQKRLRRVAKPLERVQAVSTD-EAIPSTSELDYNEAAAKLENIYKLSPTGYVSDVE-- 1405
            KEN+KR RRV+K  ERV AVS D EA  S  ELDY+EAAAKLE+IYK S     SD E  
Sbjct: 61   KENEKRSRRVSKRTERVHAVSIDIEASTSPLELDYSEAAAKLESIYKRSLETDSSDTEAK 120

Query: 1404 DIDSXXXXXXXXXXKIGTDDXXXXXXXXXXXXXXXXXXXRLTLDKRIELRKNEKNEVFAS 1225
            D              +  D+                   RL LD+RI L KN++ E+ AS
Sbjct: 121  DHQIVKRRQRTRKRIVEGDEETKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVAS 180

Query: 1224 ICKREHAED-EDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKAL 1048
              KRE  ED EDE I++LVREYS + DL S DWKKMKIPPVLPSSEH WLFKLMQPMKA+
Sbjct: 181  SQKRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAI 240

Query: 1047 GQVNENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINKY 868
             QV ENLQ+DLGREPTD E A+ATN+   ++RKN+EVGR AR KLIKHNLRLVLFVINKY
Sbjct: 241  LQVKENLQNDLGREPTDAEAAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINKY 300

Query: 867  FQEFANGA-FQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTRV 691
            FQ+FANG  FQDLCQAGVKGLITAIDRFEP ++FRLSTY LFWIRHAIIRSMTTSSFT+V
Sbjct: 301  FQDFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKV 360

Query: 690  PFGLESVRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHARYA 511
            PFGLES+RVEIQ+AKL+LLFELQR+PT+EEIIE+V +SPERYH VM+ SKPV SLHAR+ 
Sbjct: 361  PFGLESIRVEIQKAKLQLLFELQRMPTDEEIIERVRLSPERYHEVMKVSKPVFSLHARHM 420

Query: 510  TTQEEFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 331
            TTQEE INGITDVDGV GDKR+QPALLR+ALDDVLDSLKPKESLVIRQRYGLDGKGDRTL
Sbjct: 421  TTQEELINGITDVDGVDGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 480

Query: 330  GEIAGNLNISREMVRKHEVKALMKLKHPARVDHLREYIY 214
            GEIAGNLNISREMVRKHEVKALMKLKHP RVD+LR YI+
Sbjct: 481  GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYIF 519


>ref|XP_011084487.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Sesamum indicum]
          Length = 518

 Score =  674 bits (1738), Expect = 0.0
 Identities = 356/517 (68%), Positives = 411/517 (79%), Gaps = 3/517 (0%)
 Frame = -2

Query: 1755 MGVVTVPSSASQTLLGLKARFSSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIETP 1576
            MGVVTV SSA++T LGL AR+ +  +L +R +I +FK DK K+ +L+   +S+ LP+E  
Sbjct: 1    MGVVTVSSSAARTPLGLDARYLTRVSLCRRQVILSFKNDKNKNIALIAPRESVALPLEAK 60

Query: 1575 KENQKRLRRVAKPLERVQAVSTDEAIPSTSELDYNEAAAKLENIYKLSPTGYVSDVEDID 1396
            KE +KR R+V K +ERV AVSTDEA PST +LDYNEAAAKLE IYK SP   VS  E  D
Sbjct: 61   KEKEKRSRKVKKLVERVSAVSTDEASPSTIDLDYNEAAAKLEYIYKRSPATTVSLEEVKD 120

Query: 1395 SXXXXXXXXXXKIGTDDXXXXXXXXXXXXXXXXXXXRLTLDKRIELRKNEKNEVFASIC- 1219
                       + G  +                   RLTL+KRI L+ N++ +  AS   
Sbjct: 121  QRVKRRRPLRKRTGEAEEAEKKTADDVVRSKRKKERRLTLEKRIALKTNKEVDFLASSSQ 180

Query: 1218 -KREHAEDEDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKALGQ 1042
             +++   DEDE I+RLVR+YS S DL+S DWKKMKIPPVLPSSEH WLFKLMQPMKA+ Q
Sbjct: 181  KRKQRKNDEDEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQ 240

Query: 1041 VNENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINKYFQ 862
            V ENLQ+DLGRE TD ELA+AT    VQ+RK +EVGR AR KLIKHNLRLVLFV+NKYFQ
Sbjct: 241  VKENLQNDLGREVTDDELAEATKTNAVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 300

Query: 861  EFANGA-FQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTRVPF 685
            +F+NG  FQDLCQAGVKGLITAIDRFEPK++FRLSTY+LFWIRHAIIRSMT SSFT+V F
Sbjct: 301  DFSNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYSLFWIRHAIIRSMTLSSFTKVSF 360

Query: 684  GLESVRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHARYATT 505
            GLESVRVEIQ+AKLELLFELQRLP++EEI+ +VGISPERYH VMR SKP+SSLHAR+A T
Sbjct: 361  GLESVRVEIQKAKLELLFELQRLPSDEEIVNRVGISPERYHEVMRVSKPISSLHARHAVT 420

Query: 504  QEEFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 325
            QEEFINGI+DVD V GDKR+QPALLR+ALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 421  QEEFINGISDVDDVEGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 480

Query: 324  IAGNLNISREMVRKHEVKALMKLKHPARVDHLREYIY 214
            IAGNLNISREMVRKHEVKALMKLKHPAR+D+LR YIY
Sbjct: 481  IAGNLNISREMVRKHEVKALMKLKHPARIDYLRRYIY 517


>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score =  672 bits (1733), Expect = 0.0
 Identities = 362/517 (70%), Positives = 415/517 (80%), Gaps = 3/517 (0%)
 Frame = -2

Query: 1755 MGVVTVPSSASQTLLGLKARFSSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIETP 1576
            MGVVTV SSAS++ LGL +RFS+    LKRP+I +FK+DK K+ +L+   +SI+L IET 
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETS 60

Query: 1575 KENQKRLRRVAKPLERVQAVSTDEAIPSTSELDYNEAAAKLENIYKLSPTGYVSDVEDID 1396
            KEN+KR RRV+K  ERV AV+  EA PST ELDY+EAAAKLE+IYK S     S+ E  D
Sbjct: 61   KENEKRSRRVSKRSERVHAVAI-EASPSTLELDYSEAAAKLESIYKRSLETASSNTEVQD 119

Query: 1395 SXXXXXXXXXXKIGT-DDXXXXXXXXXXXXXXXXXXXRLTLDKRIELRKNEKNEVFASIC 1219
                       +I   D+                   RL LD+RI L KN++ E+ AS  
Sbjct: 120  HLVKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASSE 179

Query: 1218 KREHAED-EDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKALGQ 1042
            +R+  ED EDE I++LVREYS + DL S DWKKMKIPPVLPSSEH WLFKLMQPMKA+ Q
Sbjct: 180  RRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAILQ 239

Query: 1041 VNENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINKYFQ 862
            V ENLQ+DLGREPTD E+A+ATNM   ++RK +EVGR AR KLIKHNLRLVLFV+NKYFQ
Sbjct: 240  VKENLQNDLGREPTDGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYFQ 299

Query: 861  EFANGA-FQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTRVPF 685
            +FANG+ FQDLCQAGVKGLITAIDRFEP ++FRLSTY LFWIRHAIIRSMTTSSFT+VPF
Sbjct: 300  DFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPF 359

Query: 684  GLESVRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHARYATT 505
            GLES+RVEIQ+AKLELLFELQR+PT+EEII +VG+SPERYH VM+ SKPVSSLHAR  TT
Sbjct: 360  GLESIRVEIQKAKLELLFELQRIPTDEEIIRRVGLSPERYHEVMKVSKPVSSLHARNKTT 419

Query: 504  QEEFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 325
            QEE INGITDVDGV GDKRKQPALLR+ALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 420  QEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 479

Query: 324  IAGNLNISREMVRKHEVKALMKLKHPARVDHLREYIY 214
            IAGNLNISREMVRKHEVKALMKLKHP RVD++R YI+
Sbjct: 480  IAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 516


>ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao]
            gi|590673674|ref|XP_007038960.1| Sigma factor E isoform 1
            [Theobroma cacao] gi|508776204|gb|EOY23460.1| Sigma
            factor E isoform 1 [Theobroma cacao]
            gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
            [Theobroma cacao]
          Length = 516

 Score =  667 bits (1722), Expect = 0.0
 Identities = 352/515 (68%), Positives = 408/515 (79%), Gaps = 2/515 (0%)
 Frame = -2

Query: 1755 MGVVTVPSSASQTLLGLKARFSSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIETP 1576
            MGVV+V SSA++T LGL  +FS+ +   +RPL  AFK DK  + +LVT  + I LPIET 
Sbjct: 1    MGVVSVSSSAARTPLGLSTKFSTQRCTSRRPLTVAFKADKSDNTALVTPQEHILLPIETA 60

Query: 1575 KENQKRLRRVAKPLERVQAVSTDEAIPSTSELDYNEAAAKLENIYKLSPTGYVSDVEDID 1396
            KE+ KR  +  K  + V  V TD+  P T E+DYNEAAAKLENIYKLSP    SDVE+++
Sbjct: 61   KEHPKRRGKAKKDPKIVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEVE 120

Query: 1395 SXXXXXXXXXXKIG-TDDXXXXXXXXXXXXXXXXXXXRLTLDKRIELRKNEKNEVFASIC 1219
                       +   +D+                   RL+LD RI L+KN + +   S+ 
Sbjct: 121  GKIKGRRQRRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPVVSVR 180

Query: 1218 KREHAEDEDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKALGQV 1039
            +++ +E+E E I+RLVR+YS S DL+S DW+KMKIPPVLPS EHTWLFKLMQPMKAL Q 
Sbjct: 181  RKKSSENESEKIDRLVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQA 240

Query: 1038 NENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINKYFQE 859
             ENLQ DLGR+PT+ ELA+ATNM+  QVRK++EVG+ AR KLIKHNLRLVLF INKYFQ+
Sbjct: 241  KENLQKDLGRDPTEDELAEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSINKYFQD 300

Query: 858  FANGA-FQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTRVPFG 682
            FANG  FQDLCQAGVKGLITAIDRFEP++RFRLSTY+LFWIRHAIIRSMT SSFTRV FG
Sbjct: 301  FANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSFG 360

Query: 681  LESVRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHARYATTQ 502
            LESVRVEIQRAKLELLFEL R PTEEEII+KVGISPERY  VMRASKPV+SLH+R++ TQ
Sbjct: 361  LESVRVEIQRAKLELLFELHREPTEEEIIKKVGISPERYQEVMRASKPVASLHSRHSVTQ 420

Query: 501  EEFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 322
            EEFINGITD+DGVGGD R+QPALLR+ALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
Sbjct: 421  EEFINGITDIDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 480

Query: 321  AGNLNISREMVRKHEVKALMKLKHPARVDHLREYI 217
            AGNLNISREMVRKHEVKALMKLKHPARVD+LR Y+
Sbjct: 481  AGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 515


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial isoform X1 [Solanum
            lycopersicum]
          Length = 516

 Score =  660 bits (1703), Expect = 0.0
 Identities = 356/517 (68%), Positives = 412/517 (79%), Gaps = 3/517 (0%)
 Frame = -2

Query: 1755 MGVVTVPSSASQTLLGLKARFSSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIETP 1576
            MGVVTV SSAS++ LGL +RFS+    LKRP+I +FK+D  K+ +LV+  +SI+ PIET 
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60

Query: 1575 KENQKRLRRVAKPLERVQAVSTDEAIPSTSELDYNEAAAKLENIYKLSPTGYVSDVEDID 1396
            KEN+KR RRV+K  ERV AV T EA PST ELDY+EAAAKLE+IYK S      + E  D
Sbjct: 61   KENEKRSRRVSKRTERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119

Query: 1395 SXXXXXXXXXXKI-GTDDXXXXXXXXXXXXXXXXXXXRLTLDKRIELRKNEKNEVFASIC 1219
                       +I  +D+                   RL LD+RI L KN++ ++ AS  
Sbjct: 120  HLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSE 179

Query: 1218 KREHAED-EDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKALGQ 1042
            +R+  ED EDE I++LVREYS + DL S DWKKMKIPPVLPSSEHTWLFKLMQPMKA+ Q
Sbjct: 180  RRKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQ 239

Query: 1041 VNENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINKYFQ 862
            V ENLQ+DLGREPTD E+A+ATNM   ++RK +E GR AR KLIKHNLRLVLFV+NKYFQ
Sbjct: 240  VKENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQ 299

Query: 861  EFANGA-FQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTRVPF 685
            +FAN + FQDLCQAGVKGLITAIDRFEP ++FRLSTY LFWIRHAIIR MTTSSFT+VPF
Sbjct: 300  DFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVPF 359

Query: 684  GLESVRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHARYATT 505
            GLES+RVEIQ+AKLELLFELQR+PT++EII++VG SPERYH VM+ SKP+ SLHAR  TT
Sbjct: 360  GLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTT 419

Query: 504  QEEFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 325
            QEE INGITDVDGV GDKRKQPALLR+ALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 420  QEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 479

Query: 324  IAGNLNISREMVRKHEVKALMKLKHPARVDHLREYIY 214
            IAGNLNISREMVRKHEVKALMKLKHP RVD++R YI+
Sbjct: 480  IAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 516


>ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
            gi|462415472|gb|EMJ20209.1| hypothetical protein
            PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  657 bits (1695), Expect = 0.0
 Identities = 351/518 (67%), Positives = 406/518 (78%), Gaps = 5/518 (0%)
 Frame = -2

Query: 1755 MGVVTVPSSASQTLLGLKARFSSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIETP 1576
            MGVVTV SSAS+T LGL  + +  ++ L++PLI AFK D+    +LV   + I LPIET 
Sbjct: 1    MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60

Query: 1575 KENQKRLRRVAKPLERVQAVSTDEAIPSTSELDYNEAAAKLENIYKLSP-TGYVSDVEDI 1399
            K++QKRL +  K  + V++ +TD A P T E+DYNEAAAKLEN+YK SP T   SDVED+
Sbjct: 61   KKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDV 120

Query: 1398 DSXXXXXXXXXXKIGTDDXXXXXXXXXXXXXXXXXXXR--LTLDKRIELRKNEKNEVFAS 1225
            D           K    D                      L+L+KR+ L+ N+  +V +S
Sbjct: 121  DGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISS 180

Query: 1224 IC-KREHAEDEDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKAL 1048
            I  KR+  ++E+E I  LVREYS S DL+S DWKKMKIPPVL SSEH WLFKLMQPMK L
Sbjct: 181  IVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGL 240

Query: 1047 GQVNENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINKY 868
             +V ENLQ DLGREPT+ ELA+ATNM++VQV+K++EVGR AR KLIKHNLRLVLFV+NKY
Sbjct: 241  LEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKY 300

Query: 867  FQEFANGA-FQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTRV 691
            FQ+FANG  FQDLCQAGVKGLITAIDRFEPK+ FRLSTY LFWIRHAIIRSMT SSFTRV
Sbjct: 301  FQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTRV 360

Query: 690  PFGLESVRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHARYA 511
             FGLESVR EIQ+AKL +LF L+R+PTE+EIIEKVGISPERYH VMRASKPV SLH+R+ 
Sbjct: 361  SFGLESVRAEIQKAKLGMLFALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHSRHT 420

Query: 510  TTQEEFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 331
            TTQEEFINGITDVDGV GD R++PALLR+ALDDVLDSLKPKESLVIRQRYGLDGKGDRTL
Sbjct: 421  TTQEEFINGITDVDGVEGDNRQKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 480

Query: 330  GEIAGNLNISREMVRKHEVKALMKLKHPARVDHLREYI 217
            GEIAGNLNISREMVRKHEVKALMKLKHPARVD+LR Y+
Sbjct: 481  GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 518


>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
            gi|567858878|ref|XP_006422122.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
            gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Citrus
            sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Citrus
            sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Citrus
            sinensis] gi|557523994|gb|ESR35361.1| hypothetical
            protein CICLE_v10004760mg [Citrus clementina]
            gi|557523995|gb|ESR35362.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
            gi|641837169|gb|KDO56125.1| hypothetical protein
            CISIN_1g010092mg [Citrus sinensis]
            gi|641837170|gb|KDO56126.1| hypothetical protein
            CISIN_1g010092mg [Citrus sinensis]
            gi|641837171|gb|KDO56127.1| hypothetical protein
            CISIN_1g010092mg [Citrus sinensis]
            gi|641837172|gb|KDO56128.1| hypothetical protein
            CISIN_1g010092mg [Citrus sinensis]
          Length = 513

 Score =  648 bits (1672), Expect = 0.0
 Identities = 347/515 (67%), Positives = 400/515 (77%), Gaps = 2/515 (0%)
 Frame = -2

Query: 1755 MGVVTVPSSASQTLLGLKARFSSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIETP 1576
            MGVVT+ SS +++ +GL     S+++  KRPLI AFK DK  +++L +  + I LPIETP
Sbjct: 1    MGVVTISSSPARSPIGLST--ISHRSTSKRPLIVAFKADKSNNQALFSPQEQIPLPIETP 58

Query: 1575 KENQKRLRRVAKPLERVQAVSTDEAIPSTSELDYNEAAAKLENIYKLSPTGYVSDVEDID 1396
            K +QKR     K LERV+ V +DEA P T ++DYNEAAAKLENIYKLSP    S+V+  D
Sbjct: 59   KRHQKRRENSRKRLERVKGVFSDEASPCTLDVDYNEAAAKLENIYKLSPAVTTSEVKYAD 118

Query: 1395 SXXXXXXXXXXKIG-TDDXXXXXXXXXXXXXXXXXXXRLTLDKRIELRKNEKNEVFASIC 1219
                       +IG  +                    RL+LDKRIELRKNE  +V     
Sbjct: 119  GVVKRGRQRRKRIGEVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIELRKNEDEKVVTKTR 178

Query: 1218 KREHAEDEDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKALGQV 1039
            K + ++DE E I +LVREYS S DL+S DWKKMKIPPVL S+EHTWLFKLMQPMK   QV
Sbjct: 179  KTD-SKDEHEKIEKLVREYSYSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQV 237

Query: 1038 NENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINKYFQE 859
             E LQ DLGREPTDVELA+ATNM+  QV+K +EVGR AR KLIKHNLRLVLFVI KYFQ+
Sbjct: 238  KEQLQKDLGREPTDVELAEATNMSAAQVKKCLEVGRAARNKLIKHNLRLVLFVIKKYFQD 297

Query: 858  FANGA-FQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTRVPFG 682
            FANG  FQDLCQAGVKGLITAIDRFEPK+RFRLSTY LFWIRHAIIRSMT SSFTRVPFG
Sbjct: 298  FANGPRFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVPFG 357

Query: 681  LESVRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHARYATTQ 502
            LESVR EIQRAKLELLFEL+R+PT+EEII+ V ISPERY  VM+ASKP+ SLH+R+  TQ
Sbjct: 358  LESVRGEIQRAKLELLFELKRVPTDEEIIQGVNISPERYREVMKASKPILSLHSRHGVTQ 417

Query: 501  EEFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 322
            EEFINGITDVDGV  + ++QPALLR+ALDDVLDSLKPKESLVIRQR+GLDGKGDRTLGEI
Sbjct: 418  EEFINGITDVDGVENENQRQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEI 477

Query: 321  AGNLNISREMVRKHEVKALMKLKHPARVDHLREYI 217
            AGNLNISREMVRKHEVK LMKLKHP RVD+LR+++
Sbjct: 478  AGNLNISREMVRKHEVKGLMKLKHPTRVDYLRQHM 512


>ref|XP_008376694.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Malus domestica]
          Length = 519

 Score =  647 bits (1668), Expect = 0.0
 Identities = 345/518 (66%), Positives = 402/518 (77%), Gaps = 5/518 (0%)
 Frame = -2

Query: 1755 MGVVTVPSSASQTLLGLKARFSSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIETP 1576
            MGVVTV +SA++T LGL A+ +S ++  ++PLI AFK D+    +LV     I LPIET 
Sbjct: 1    MGVVTVSTSAARTPLGLSAKSTSQRSTFRKPLIVAFKTDESNKTALVAPQGKIPLPIETR 60

Query: 1575 KENQKRLRRVAKPLERVQAVSTDEAIPSTS-ELDYNEAAAKLENIYKLSPTGYVS-DVED 1402
            K++QKR+ +  K  + V++ +TD A P T+ E+DYNEAAAKLEN+YK SP      DVED
Sbjct: 61   KKHQKRIGKARKLAKSVKSTATDVAAPCTTLEVDYNEAAAKLENLYKRSPEIEADVDVED 120

Query: 1401 IDSXXXXXXXXXXKIGTD--DXXXXXXXXXXXXXXXXXXXRLTLDKRIELRKNEKNEVFA 1228
             D           K      +                   RL LDKR+ L+ N+  +V +
Sbjct: 121  ADGLMRRGRKRRKKTSESNHEKEEKRTSDIVVRSKTKKAKRLNLDKRVSLKWNKDEKVVS 180

Query: 1227 SICKREHAEDEDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKAL 1048
            S+ KR+  ++E E I  LVREYS S DL+S DWKKMKIPPVL SSEH WLFKLMQPMK L
Sbjct: 181  SVQKRKDQKNEMEKIEELVREYSASTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGL 240

Query: 1047 GQVNENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINKY 868
             +  E LQ DLG EPT+ ELA+ATNM++VQV+K+ EVGR AR KLIKHNLRLVLFVINKY
Sbjct: 241  HEAREQLQKDLGTEPTNGELAEATNMSVVQVKKHFEVGRAARNKLIKHNLRLVLFVINKY 300

Query: 867  FQEFANGA-FQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTRV 691
            FQ+FANG  FQDLCQAGV+GLITAIDRFEPK+ FRLSTY LFWIRHAIIRSMT SSFTRV
Sbjct: 301  FQDFANGPKFQDLCQAGVRGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTVSSFTRV 360

Query: 690  PFGLESVRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHARYA 511
             FGLESVR EIQ+AKLE++F L+R+PT+EEIIEKVGISPERYH VMRASKPVSSLH+R+A
Sbjct: 361  SFGLESVRAEIQKAKLEMIFSLKRIPTDEEIIEKVGISPERYHEVMRASKPVSSLHSRHA 420

Query: 510  TTQEEFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 331
            TTQEE+INGITDVDGV GD R++PALLR+A+DDVLDSLKPKESLVIRQRYGLDGKGDRTL
Sbjct: 421  TTQEEYINGITDVDGVEGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRTL 480

Query: 330  GEIAGNLNISREMVRKHEVKALMKLKHPARVDHLREYI 217
            GEIAGNLNISREMVRKHEVKALMKLKHPARVD+LR YI
Sbjct: 481  GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 518


>gb|AKC88745.1| sigma factor [Melianthus villosus]
          Length = 513

 Score =  646 bits (1667), Expect = 0.0
 Identities = 347/514 (67%), Positives = 395/514 (76%), Gaps = 1/514 (0%)
 Frame = -2

Query: 1755 MGVVTVPSSASQTLLGLKARFSSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIETP 1576
            M VVTV SS +++ LGL  + S+++  LKRPLI AFK DK    +LV  HD I LP+   
Sbjct: 1    MEVVTVSSSVARSPLGLSTKPSNHRCTLKRPLIVAFKTDKINDIALVAPHDQIPLPVANA 60

Query: 1575 KENQKRLRRVAKPLERVQAVSTDEAIPSTSELDYNEAAAKLENIYKLSPTGYVSDVEDID 1396
            K+ QKRL R  KP +R + V  DE+ P T ELD+NEAAAKLENIYKLSP    SDVE+ D
Sbjct: 61   KKQQKRLGRGTKPSKRTKVVYADESSPCTLELDFNEAAAKLENIYKLSPPSDTSDVENQD 120

Query: 1395 SXXXXXXXXXXKIGTDDXXXXXXXXXXXXXXXXXXXRLTLDKRIELRKNEKNEVFASICK 1216
                         G DD                   RL+LDKR+ L ++ K +V  S  +
Sbjct: 121  GLMDRGRRRRRNRG-DDTTQKRTTDNVVRNQTKKVKRLSLDKRVALIRH-KEDVDVSRRR 178

Query: 1215 REHAEDEDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKALGQVN 1036
            +   +++   I  LVREYS+S D+ S DWKKMKIPPVL SSEH+WLFKLMQPMK L    
Sbjct: 179  KTDHKNKSYNIEILVREYSSSTDMASLDWKKMKIPPVLSSSEHSWLFKLMQPMKGLLNFK 238

Query: 1035 ENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINKYFQEF 856
            ENL+ DLGREPTD ELA ATNM +V+++K +EVGR AR KLIKHNLRLVLFVINKYFQ+F
Sbjct: 239  ENLKTDLGREPTDYELADATNMNVVKLKKEMEVGRAARNKLIKHNLRLVLFVINKYFQDF 298

Query: 855  ANGA-FQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTRVPFGL 679
            ANG+ FQDLCQAGVKGLITAIDRFEPK++FRLSTY LFWIRHAI RSMT SSFTRV FGL
Sbjct: 299  ANGSRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAITRSMTLSSFTRVSFGL 358

Query: 678  ESVRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHARYATTQE 499
            ESVR EIQ+AK ELLF LQRLPTEEEIIEKVG+SPERYH V+RASKPV SLHA++  TQE
Sbjct: 359  ESVRAEIQKAKFELLFRLQRLPTEEEIIEKVGVSPERYHEVLRASKPVLSLHAKHMITQE 418

Query: 498  EFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIA 319
            EFIN ITDVDGVG D+R+QPALLR+ALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIA
Sbjct: 419  EFINVITDVDGVGADQRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIA 478

Query: 318  GNLNISREMVRKHEVKALMKLKHPARVDHLREYI 217
            GNLNISREMVRKHEVKALMKLKHPARVD+LR Y+
Sbjct: 479  GNLNISREMVRKHEVKALMKLKHPARVDYLRPYL 512


>ref|XP_009368680.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Pyrus x bretschneideri]
          Length = 519

 Score =  645 bits (1665), Expect = 0.0
 Identities = 345/518 (66%), Positives = 401/518 (77%), Gaps = 5/518 (0%)
 Frame = -2

Query: 1755 MGVVTVPSSASQTLLGLKARFSSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIETP 1576
            MGVVTV +SA++T LGL  + +S ++  ++P I AFK D+    +LV     I LPIET 
Sbjct: 1    MGVVTVSTSAARTPLGLSTKSTSQRSPFRKPWIVAFKTDESNKTALVAPQGKIPLPIETR 60

Query: 1575 KENQKRLRRVAKPLERVQAVSTDEAIPSTS-ELDYNEAAAKLENIYKLSPTGYVS-DVED 1402
            K++QKR+ +  K  + V++ +TD A P T+ E+DYNEAAAKLEN+YK SP      DVED
Sbjct: 61   KKHQKRIGKARKLAKSVKSTATDVAAPCTTLEVDYNEAAAKLENLYKRSPEIEADVDVED 120

Query: 1401 IDSXXXXXXXXXXKIGTDD--XXXXXXXXXXXXXXXXXXXRLTLDKRIELRKNEKNEVFA 1228
             D           K    D                     RL LDKR+ L+ N+  +V +
Sbjct: 121  ADGLLRRGRKRRKKTSESDHEKEEKRTSDIVVRSKTKKAKRLNLDKRVALKWNKDEKVVS 180

Query: 1227 SICKREHAEDEDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKAL 1048
            S+ KR+  ++E E I  LVREYS S DL+S DWKKMKIPPVL SSEH WLFKLMQPMK L
Sbjct: 181  SVQKRKDQKNETEKIEELVREYSASTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGL 240

Query: 1047 GQVNENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINKY 868
             +V E LQ DLG EPT+ ELA+ATNM++VQV+K+ EVGR AR KLIKHNLRLVLFVINKY
Sbjct: 241  HEVREQLQKDLGTEPTNGELAEATNMSVVQVKKHFEVGRAARNKLIKHNLRLVLFVINKY 300

Query: 867  FQEFANG-AFQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTRV 691
            FQ+FANG  FQDLCQAGV+GLITAIDRFEPK+ FRLSTY LFWIRHAIIRSMT SSFTRV
Sbjct: 301  FQDFANGPKFQDLCQAGVRGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTVSSFTRV 360

Query: 690  PFGLESVRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHARYA 511
             FGLESVR EIQ+AKLE++F L+R+PT+EEIIEKVGISPERYH VMRASKPVSSLH+R+A
Sbjct: 361  SFGLESVRAEIQKAKLEMMFSLKRMPTDEEIIEKVGISPERYHEVMRASKPVSSLHSRHA 420

Query: 510  TTQEEFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 331
            TTQEE+INGITDVDGV GD R++PALLR+A+DDVLDSLKPKESLVIRQRYGLDGKGDRTL
Sbjct: 421  TTQEEYINGITDVDGVEGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRTL 480

Query: 330  GEIAGNLNISREMVRKHEVKALMKLKHPARVDHLREYI 217
            GEIAGNLNISREMVRKHEVKALMKLKHPARVD+LR YI
Sbjct: 481  GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 518


>gb|AKC88737.1| sigma factor [Francoa sonchifolia]
          Length = 513

 Score =  645 bits (1663), Expect = 0.0
 Identities = 341/514 (66%), Positives = 396/514 (77%), Gaps = 1/514 (0%)
 Frame = -2

Query: 1755 MGVVTVPSSASQTLLGLKARFSSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIETP 1576
            MGVVTV SS +++ LGL  +FS+++  LKRP I + K DK  + +LV   + I LPI+TP
Sbjct: 1    MGVVTVSSSPARSPLGLSTKFSTHRCTLKRPSIVSLKADKTNNIALVAPQEQIPLPIQTP 60

Query: 1575 KENQKRLRRVAKPLERVQAVSTDEAIPSTSELDYNEAAAKLENIYKLSPTGYVSDVEDID 1396
            K+ +KRL R  K  +RV+AVSTD   P T ELD+NEAAAKLENIYKLSP    SD EDID
Sbjct: 61   KKQRKRLGRAIKTSKRVKAVSTDVTSPCTLELDFNEAAAKLENIYKLSPPTDCSDTEDID 120

Query: 1395 SXXXXXXXXXXKIGTDDXXXXXXXXXXXXXXXXXXXRLTLDKRIELRKNEKNEVFASICK 1216
                         G DD                   RL+LD+RI L +N++ +  +S   
Sbjct: 121  GMKSRHRKRMN--GGDDTGEKRTSDNVVRNRTKKVKRLSLDRRISLIRNKEGDADSSSRS 178

Query: 1215 REHAEDEDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKALGQVN 1036
            +   ++E+  ++ LVREYS S DL+S DWKKMKIPPVL S EH WLFKLMQPMK L Q+ 
Sbjct: 179  KIDQKNENYSVDWLVREYSASTDLVSLDWKKMKIPPVLSSLEHAWLFKLMQPMKELLQLK 238

Query: 1035 ENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINKYFQEF 856
            ENL  D  REPTD ELA+A NM ++++RK+++VGR AR KLIKHNLRLVLFV+NKYFQ+F
Sbjct: 239  ENLHKDFSREPTDYELAEALNMNVIEMRKDMDVGRAARNKLIKHNLRLVLFVMNKYFQDF 298

Query: 855  ANGA-FQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTRVPFGL 679
            ANG  FQDLCQAGVKGLITAIDRFEPK+R RLSTY LFWIRHAI RS+T SSFTRV FGL
Sbjct: 299  ANGPRFQDLCQAGVKGLITAIDRFEPKRRVRLSTYGLFWIRHAITRSLTLSSFTRVSFGL 358

Query: 678  ESVRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHARYATTQE 499
            ESVRVEIQRAKLELLFEL RLPTE+EIIEKVGIS ERYH VMRA+KPV SLHA++  T E
Sbjct: 359  ESVRVEIQRAKLELLFELHRLPTEDEIIEKVGISFERYHEVMRAAKPVYSLHAKHMITHE 418

Query: 498  EFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIA 319
            EFIN +TDVDG+ GD+R+QPAL R+ALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIA
Sbjct: 419  EFINALTDVDGIHGDQRRQPALFRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIA 478

Query: 318  GNLNISREMVRKHEVKALMKLKHPARVDHLREYI 217
            GNLNISREMVRKHEVKALMKLKHPARVD+LR Y+
Sbjct: 479  GNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 512


>ref|XP_009357326.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Pyrus x bretschneideri]
          Length = 519

 Score =  644 bits (1662), Expect = 0.0
 Identities = 345/518 (66%), Positives = 401/518 (77%), Gaps = 5/518 (0%)
 Frame = -2

Query: 1755 MGVVTVPSSASQTLLGLKARFSSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIETP 1576
            MGVVTV +SA++T LGL  + +S ++  ++P I AFK D+    +LV    +I LPIET 
Sbjct: 1    MGVVTVSTSAARTPLGLSTKSTSQRSPFRKPWIVAFKTDESNKTALVAPQGNIPLPIETR 60

Query: 1575 KENQKRLRRVAKPLERVQAVSTDEAIPSTS-ELDYNEAAAKLENIYKLSPTGYVS-DVED 1402
            K+ QKR+ +  K  + V++ +TD A P T+ E+DYNEAAAKLEN+YK SP      DVED
Sbjct: 61   KKLQKRIGKARKLAKSVKSTATDVAAPCTTLEVDYNEAAAKLENLYKRSPEIEADVDVED 120

Query: 1401 IDSXXXXXXXXXXKIGTDD--XXXXXXXXXXXXXXXXXXXRLTLDKRIELRKNEKNEVFA 1228
             D           K    D                     RL LDKR+ L+ N+  +V +
Sbjct: 121  ADGLLRRGRKRRKKTSESDHEKEEKRTSDIVVRSKTKKAKRLNLDKRVALKWNKDEKVVS 180

Query: 1227 SICKREHAEDEDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKAL 1048
            S+ KR+  ++E E I  LVREYS S DL+S DWKKMKIPPVL SSEH WLFKLMQPMK L
Sbjct: 181  SVQKRKDQKNETEKIEELVREYSASTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGL 240

Query: 1047 GQVNENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINKY 868
             +V E LQ DLG EPT+ ELA+ATNM++VQV+K+ EVGR AR KLIKHNLRLVLFVINKY
Sbjct: 241  HEVREQLQKDLGTEPTNGELAEATNMSVVQVKKHFEVGRAARNKLIKHNLRLVLFVINKY 300

Query: 867  FQEFANG-AFQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTRV 691
            FQ+FANG  FQDLCQAGV+GLITAIDRFEPK+ FRLSTY LFWIRHAIIRSMT SSFTRV
Sbjct: 301  FQDFANGPKFQDLCQAGVRGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTVSSFTRV 360

Query: 690  PFGLESVRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHARYA 511
             FGLESVR EIQ+AKLE++F L+R+PT+EEIIEKVGISPERYH VMRASKPVSSLH+R+A
Sbjct: 361  SFGLESVRAEIQKAKLEMIFSLKRMPTDEEIIEKVGISPERYHEVMRASKPVSSLHSRHA 420

Query: 510  TTQEEFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 331
            TTQEE+INGITDVDGV GD R++PALLR+A+DDVLDSLKPKESLVIRQRYGLDGKGDRTL
Sbjct: 421  TTQEEYINGITDVDGVEGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRTL 480

Query: 330  GEIAGNLNISREMVRKHEVKALMKLKHPARVDHLREYI 217
            GEIAGNLNISREMVRKHEVKALMKLKHPARVD+LR YI
Sbjct: 481  GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 518


>ref|XP_008465379.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Cucumis melo]
          Length = 511

 Score =  643 bits (1658), Expect = 0.0
 Identities = 345/516 (66%), Positives = 400/516 (77%), Gaps = 3/516 (0%)
 Frame = -2

Query: 1755 MGVVTVPSSASQTLLGLKARFSSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIETP 1576
            MGVVTV SSA++T   L A+FS++ + LKRP I AFK DK  + +LV+ H+ +TLP+E+ 
Sbjct: 1    MGVVTVSSSAARTPFRLSAKFSNHGSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 1575 KENQKRLRRVAKPLERVQAVSTDEAIPSTSELDYNEAAAKLENIYKLSPTGYVSDVEDID 1396
              ++KR    +KPL+RV+AV  DEA   + +LDYNEAAAKLENI+KLSP    SD+E  D
Sbjct: 61   NRSKKRSGNTSKPLKRVKAVLIDEATSCSLDLDYNEAAAKLENIFKLSPMTEDSDMESKD 120

Query: 1395 SXXXXXXXXXXKIGTDDXXXXXXXXXXXXXXXXXXXRLTLDKRIELRKNEKNEVFAS--I 1222
                                                RL LDKRI L+   K E  +   I
Sbjct: 121  GRSKRGQQR------SKKSDKRPSDGIVRNKTKRIKRLDLDKRIALKNKRKAERKSGSFI 174

Query: 1221 CKREHAEDEDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKALGQ 1042
             + +  ++ED+ I+RLVR+YS S DL+S DWKKMKIPPVLPSSEHT LFKL+QPMKAL +
Sbjct: 175  KETKETKNEDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIE 234

Query: 1041 VNENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINKYFQ 862
            V E LQ +LGREPT+ ELA ATNM ++QVR+ +EVGR AR KLIKHNLRLVLFVINKYF+
Sbjct: 235  VQEELQKELGREPTEAELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFE 294

Query: 861  EFANGA-FQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTRVPF 685
            +FA G  FQDLCQAGVKGLITAIDRFEPK++FRLSTYALFWIRHAIIRSMT SSFTRV F
Sbjct: 295  DFATGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSF 354

Query: 684  GLESVRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHARYATT 505
            GL+SVRVEIQRAKLELL EL RLPTEEEII KVGISPERY  VMRA+KPV SLH+R++TT
Sbjct: 355  GLDSVRVEIQRAKLELLCELHRLPTEEEIIAKVGISPERYLEVMRATKPVYSLHSRHSTT 414

Query: 504  QEEFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 325
             EE INGITDV+G GGD R+QPALLR+ALDDVLDSLKPKESLVIRQRYGLDGKG+RTLGE
Sbjct: 415  SEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGE 474

Query: 324  IAGNLNISREMVRKHEVKALMKLKHPARVDHLREYI 217
            IAGNLNISREMVRKHEVKALMKLKHPARVD+LR Y+
Sbjct: 475  IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 510


>gb|KDO56129.1| hypothetical protein CISIN_1g010092mg [Citrus sinensis]
          Length = 518

 Score =  642 bits (1656), Expect = 0.0
 Identities = 347/520 (66%), Positives = 400/520 (76%), Gaps = 7/520 (1%)
 Frame = -2

Query: 1755 MGVVTVPSSASQTLLGLKARFSSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIETP 1576
            MGVVT+ SS +++ +GL     S+++  KRPLI AFK DK  +++L +  + I LPIETP
Sbjct: 1    MGVVTISSSPARSPIGLST--ISHRSTSKRPLIVAFKADKSNNQALFSPQEQIPLPIETP 58

Query: 1575 KENQKRLRRVAKPLERVQAVSTDEAIPSTSELDYNEAAAKLENIYKLSPTGYVSDVEDID 1396
            K +QKR     K LERV+ V +DEA P T ++DYNEAAAKLENIYKLSP    S+V+  D
Sbjct: 59   KRHQKRRENSRKRLERVKGVFSDEASPCTLDVDYNEAAAKLENIYKLSPAVTTSEVKYAD 118

Query: 1395 SXXXXXXXXXXKIG-TDDXXXXXXXXXXXXXXXXXXXRLTLDKRIELRKNEKNEVFASIC 1219
                       +IG  +                    RL+LDKRIELRKNE  +V     
Sbjct: 119  GVVKRGRQRRKRIGEVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIELRKNEDEKVVTKTR 178

Query: 1218 KREHAEDEDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKALGQV 1039
            K + ++DE E I +LVREYS S DL+S DWKKMKIPPVL S+EHTWLFKLMQPMK   QV
Sbjct: 179  KTD-SKDEHEKIEKLVREYSYSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQV 237

Query: 1038 NENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINKYFQE 859
             E LQ DLGREPTDVELA+ATNM+  QV+K +EVGR AR KLIKHNLRLVLFVI KYFQ+
Sbjct: 238  KEQLQKDLGREPTDVELAEATNMSAAQVKKCLEVGRAARNKLIKHNLRLVLFVIKKYFQD 297

Query: 858  FANGA-FQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTRVPFG 682
            FANG  FQDLCQAGVKGLITAIDRFEPK+RFRLSTY LFWIRHAIIRSMT SSFTRVPFG
Sbjct: 298  FANGPRFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVPFG 357

Query: 681  LES-----VRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHAR 517
            LES     VR EIQRAKLELLFEL+R+PT+EEII+ V ISPERY  VM+ASKP+ SLH+R
Sbjct: 358  LESTSIMQVRGEIQRAKLELLFELKRVPTDEEIIQGVNISPERYREVMKASKPILSLHSR 417

Query: 516  YATTQEEFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDR 337
            +  TQEEFINGITDVDGV  + ++QPALLR+ALDDVLDSLKPKESLVIRQR+GLDGKGDR
Sbjct: 418  HGVTQEEFINGITDVDGVENENQRQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDR 477

Query: 336  TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDHLREYI 217
            TLGEIAGNLNISREMVRKHEVK LMKLKHP RVD+LR+++
Sbjct: 478  TLGEIAGNLNISREMVRKHEVKGLMKLKHPTRVDYLRQHM 517


>ref|XP_012858574.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Erythranthe guttatus]
            gi|604299780|gb|EYU19623.1| hypothetical protein
            MIMGU_mgv1a020453mg [Erythranthe guttata]
          Length = 515

 Score =  642 bits (1655), Expect = 0.0
 Identities = 338/516 (65%), Positives = 405/516 (78%), Gaps = 2/516 (0%)
 Frame = -2

Query: 1755 MGVVTVPSSASQTLLGLKARFSSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIETP 1576
            MGVVTV +SAS+T LGL  R+ +  ++L+RP++ AFK DK K   L++  +S  LP+E  
Sbjct: 1    MGVVTVSTSASRTSLGLNERYLTRVSILRRPVVFAFKNDKIKKIVLISPRESAALPLEAT 60

Query: 1575 KENQKRLRRVAKPLERVQAVSTDEAIPSTSELDYNEAAAKLENIYKLSPTGYVSDVEDID 1396
            K+N+KRLR+V K  ERV AVSTDEA PST +LDYNEAAAKLE I+K SPT  +S  E  D
Sbjct: 61   KDNEKRLRKVKKRAERVNAVSTDEAPPSTIDLDYNEAAAKLEYIFKQSPTVEISVDEVKD 120

Query: 1395 SXXXXXXXXXXKIGTDDXXXXXXXXXXXXXXXXXXXRLTLDKRIELRKNEKNEVFASICK 1216
                           D+                    L L+KRI LR  +++E  A   +
Sbjct: 121  VRVKRRQPRKRTEYADEAEKIADNVVRSRRSKDRR--LNLEKRIALRTKKEDESTAIFQR 178

Query: 1215 REHAE-DEDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKALGQV 1039
            R+  + DEDE I+RLVR+YS S+DL+S DWKKMKIPPVLPS+EH WLFKLMQP+KA+  V
Sbjct: 179  RKTGKNDEDEKIDRLVRDYSASSDLVSLDWKKMKIPPVLPSAEHVWLFKLMQPVKAILDV 238

Query: 1038 NENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINKYFQE 859
             E ++++LGREPTD +LA A NM  VQ+RK +E+GR AR KLIKHNLRLVLFV+NKYFQ+
Sbjct: 239  KETIENNLGREPTDEKLATAINMDTVQLRKQLEIGRAARNKLIKHNLRLVLFVMNKYFQD 298

Query: 858  FANGA-FQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTRVPFG 682
            F+NG+ FQDLCQAG KGLITAIDRFEPK++ RLSTY LFWIRH+IIRSMT SSFT+V FG
Sbjct: 299  FSNGSRFQDLCQAGAKGLITAIDRFEPKRKLRLSTYGLFWIRHSIIRSMTLSSFTKVSFG 358

Query: 681  LESVRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHARYATTQ 502
            LESVRVEI++AKLEL+FEL+RLPT+EEI+ +VGIS ERYH VMR SKP+ SLHAR++ TQ
Sbjct: 359  LESVRVEIRKAKLELMFELKRLPTDEEIVGRVGISQERYHEVMRVSKPIISLHARHSVTQ 418

Query: 501  EEFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 322
            EEFINGITDVDGV GD+RKQPALLR+ALDDVLDSLKPKE+LVIRQRYGLDGKGDRTLGEI
Sbjct: 419  EEFINGITDVDGVEGDRRKQPALLRLALDDVLDSLKPKENLVIRQRYGLDGKGDRTLGEI 478

Query: 321  AGNLNISREMVRKHEVKALMKLKHPARVDHLREYIY 214
            AGNLNISREMVRK+EVKALMKLKH ARVD+LR Y++
Sbjct: 479  AGNLNISREMVRKYEVKALMKLKHRARVDYLRRYVF 514


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Fragaria vesca subsp. vesca]
          Length = 520

 Score =  642 bits (1655), Expect = 0.0
 Identities = 347/519 (66%), Positives = 402/519 (77%), Gaps = 6/519 (1%)
 Frame = -2

Query: 1755 MGVVTVPSSASQTLLGLKARF-SSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIET 1579
            MGVVTV SS S+T LGL     SS ++ L++PLI AF+ DK   K+LV   + + LPIET
Sbjct: 1    MGVVTVSSSVSRTPLGLSTNLVSSQRSTLRKPLIVAFRTDKSDKKALVAPQEKVPLPIET 60

Query: 1578 PKENQKRLRRVAKPLERVQAVSTDEAIPSTSELDYNEAAAKLENIYKLSPTGYVSDVEDI 1399
             K+ QKRL +  K  + V+A   +EA     ELDYNEAAAKLEN+YK SP    SDVE++
Sbjct: 61   GKKVQKRLGKARKLPKSVKAALIEEAPTCDLELDYNEAAAKLENLYKRSPETEASDVENV 120

Query: 1398 DSXXXXXXXXXXKIGT---DDXXXXXXXXXXXXXXXXXXXRLTLDKRIELRKNEKNEVFA 1228
            D           K  +   D                    RL+LDKR+ L+ N+  +V A
Sbjct: 121  DGLMIKRGRKRRKKISEVDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVAA 180

Query: 1227 SIC-KREHAEDEDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKA 1051
            S+  KR+    E+E++  LVREYS S DL+S DWKKM+IPPVL SSEHTWLFKLMQPMK 
Sbjct: 181  SVVRKRKDKRSENEMMEELVREYSASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMKG 240

Query: 1050 LGQVNENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINK 871
            L +V E LQ DLGREP   ELA+ATNMT+VQV++++EVGR AR KLIKHNLRLVLFVINK
Sbjct: 241  LLEVKEILQKDLGREPNKGELAEATNMTVVQVKRHLEVGRAARNKLIKHNLRLVLFVINK 300

Query: 870  YFQEFANGA-FQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTR 694
            YFQ+FANG  FQDLCQAGVKGLITAIDRFEP++RFRLSTY LFWIRHAIIRSMT SSFTR
Sbjct: 301  YFQDFANGPKFQDLCQAGVKGLITAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFTR 360

Query: 693  VPFGLESVRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHARY 514
            V FGLESVR EIQ+AKLE+L +L+R+PTE+EIIEKVGISPERYH VMRASKPV SL++R+
Sbjct: 361  VSFGLESVRAEIQKAKLEMLVQLKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLNSRH 420

Query: 513  ATTQEEFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDRT 334
            + TQEEFINGITDVDGV GD R++PALLR+A+DDVLDSLKPKESLVIRQRYGLDGKGDRT
Sbjct: 421  SVTQEEFINGITDVDGVDGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRT 480

Query: 333  LGEIAGNLNISREMVRKHEVKALMKLKHPARVDHLREYI 217
            LGEIAGNLNISREMVRKHEVKALMKLKHPARVD+LR YI
Sbjct: 481  LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 519


>ref|XP_008234778.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Prunus mume]
          Length = 507

 Score =  638 bits (1645), Expect = e-180
 Identities = 346/518 (66%), Positives = 395/518 (76%), Gaps = 5/518 (0%)
 Frame = -2

Query: 1755 MGVVTVPSSASQTLLGLKARFSSYQALLKRPLISAFKQDKRKSKSLVTSHDSITLPIETP 1576
            MGVVTV SSAS+T LGL  + +S ++ L++PLI AFK D+    +LV   + I LPIE  
Sbjct: 1    MGVVTVSSSASRTPLGLSTKLTSQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIEXX 60

Query: 1575 KENQKRLRRVAKPLERVQAVSTDEAIPSTSELDYNEAAAKLENIYKLSP-TGYVSDVEDI 1399
                 +            + +TD A P T E+DYNEAAAKLEN+YK SP T   SDVED+
Sbjct: 61   XXXXXK------------SATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDV 108

Query: 1398 DSXXXXXXXXXXKIGTDDXXXXXXXXXXXXXXXXXXXR--LTLDKRIELRKNEKNEVFAS 1225
            D           K    D                      L+LDKR+ L+ N+  +V AS
Sbjct: 109  DGLMRRGRKRRKKTSESDADKEENRTSNTVVRNRTKKAKRLSLDKRVTLKWNKDEKVIAS 168

Query: 1224 IC-KREHAEDEDEIINRLVREYSNSADLISFDWKKMKIPPVLPSSEHTWLFKLMQPMKAL 1048
            I  KR+  ++E+E I  LVREYS S DL+S DWKKMKIPPVL SSEH WLFKLMQPMK L
Sbjct: 169  IVRKRKSRKNENEKIEELVREYSASTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGL 228

Query: 1047 GQVNENLQHDLGREPTDVELAKATNMTIVQVRKNIEVGRTARKKLIKHNLRLVLFVINKY 868
             +V ENLQ DLGREPT+ ELA+ATNM++VQV+K++EVGR AR KLIKHNLRLVLFV+NKY
Sbjct: 229  LEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKY 288

Query: 867  FQEFANGA-FQDLCQAGVKGLITAIDRFEPKKRFRLSTYALFWIRHAIIRSMTTSSFTRV 691
            FQ+FANG  FQDLCQAGVKGLITAIDRFEPK+ FRLSTY LFWIRHAIIRSMT SSFTRV
Sbjct: 289  FQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTRV 348

Query: 690  PFGLESVRVEIQRAKLELLFELQRLPTEEEIIEKVGISPERYHNVMRASKPVSSLHARYA 511
             FGLESVR EIQ+AKL +LF L+R+PTE+EIIEKVGISPERYH VMRASKPV SLH+R+ 
Sbjct: 349  SFGLESVRAEIQKAKLGMLFALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHSRHT 408

Query: 510  TTQEEFINGITDVDGVGGDKRKQPALLRIALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 331
            TTQEEFINGITDVDGV GD R++PALLR+ALDDVLDSLKPKESLVIRQRYGLDGKGDRTL
Sbjct: 409  TTQEEFINGITDVDGVEGDNRQKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 468

Query: 330  GEIAGNLNISREMVRKHEVKALMKLKHPARVDHLREYI 217
            GEIAGNLNISREMVRKHEVKALMKLKHPARVD+LR Y+
Sbjct: 469  GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 506