BLASTX nr result
ID: Cornus23_contig00002231
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00002231
(307 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007039490.1| DNA-directed RNA polymerase I subunit rpa49,... 92 1e-16
ref|XP_006350715.1| PREDICTED: uncharacterized protein LOC102603... 92 2e-16
emb|CBI35920.3| unnamed protein product [Vitis vinifera] 88 3e-15
ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I sub... 88 3e-15
ref|XP_009620774.1| PREDICTED: DNA-directed RNA polymerase I sub... 87 5e-15
ref|XP_004240985.1| PREDICTED: DNA-directed RNA polymerase I sub... 86 1e-14
ref|XP_008462335.1| PREDICTED: uncharacterized protein LOC103500... 85 2e-14
ref|XP_009769328.1| PREDICTED: DNA-directed RNA polymerase I sub... 84 5e-14
ref|XP_009769327.1| PREDICTED: DNA-directed RNA polymerase I sub... 84 5e-14
gb|KJB21085.1| hypothetical protein B456_003G182300 [Gossypium r... 83 7e-14
ref|XP_012472150.1| PREDICTED: DNA-directed RNA polymerase I sub... 83 7e-14
ref|XP_004141689.1| PREDICTED: DNA-directed RNA polymerase I sub... 83 9e-14
gb|KHG20725.1| DNA-directed RNA polymerase I subunit rpa49 [Goss... 81 3e-13
ref|XP_010087702.1| DNA-directed RNA polymerase I subunit rpa49 ... 79 2e-12
ref|XP_009386771.1| PREDICTED: uncharacterized protein LOC103973... 79 2e-12
ref|XP_010937236.1| PREDICTED: DNA-directed RNA polymerase I sub... 78 3e-12
ref|XP_008783442.1| PREDICTED: DNA-directed RNA polymerase I sub... 77 4e-12
ref|XP_010273794.1| PREDICTED: DNA-directed RNA polymerase I sub... 75 2e-11
ref|XP_002884998.1| DNA binding protein [Arabidopsis lyrata subs... 75 2e-11
gb|KNA24668.1| hypothetical protein SOVF_013550 [Spinacia oleracea] 75 3e-11
>ref|XP_007039490.1| DNA-directed RNA polymerase I subunit rpa49, putative [Theobroma
cacao] gi|508776735|gb|EOY23991.1| DNA-directed RNA
polymerase I subunit rpa49, putative [Theobroma cacao]
Length = 457
Score = 92.4 bits (228), Expect = 1e-16
Identities = 46/92 (50%), Positives = 66/92 (71%), Gaps = 6/92 (6%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPP----QPRVRIFR 92
I+ + P+KI P+V YFPSGY+P K P+ + E++E + E + P QPRV+++R
Sbjct: 47 IQLFQDQPNKIPPLVAYFPSGYNPCKTDPQTRQGEEEE--EEEEEGPDNKSNQPRVKVYR 104
Query: 91 H--EKKINRLQLVVSPNGSQVDFVGTNYSGEA 2
+ ++K NRLQ+VVSP+GS VDFVG+NYSGEA
Sbjct: 105 NMAQRKTNRLQVVVSPSGSNVDFVGSNYSGEA 136
>ref|XP_006350715.1| PREDICTED: uncharacterized protein LOC102603859 [Solanum tuberosum]
Length = 431
Score = 91.7 bits (226), Expect = 2e-16
Identities = 47/86 (54%), Positives = 58/86 (67%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPPQPRVRIFRHEKK 80
+ET++ENP+ ISPIVGYFPSGYDPL + + +++R+ K+
Sbjct: 42 METIAENPNNISPIVGYFPSGYDPLT---------------NNNDGVEELSTKLYRNAKR 86
Query: 79 INRLQLVVSPNGSQVDFVGTNYSGEA 2
NRLQLVVSPNGSQVDFVGTNYSGEA
Sbjct: 87 NNRLQLVVSPNGSQVDFVGTNYSGEA 112
>emb|CBI35920.3| unnamed protein product [Vitis vinifera]
Length = 391
Score = 87.8 bits (216), Expect = 3e-15
Identities = 45/86 (52%), Positives = 60/86 (69%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPPQPRVRIFRHEKK 80
+E + E+P+KI P+VGYFPSG+DP K +D E S P P V++FR++ +
Sbjct: 1 MEVVHEHPEKIPPLVGYFPSGFDP-------HKPQDHE-------SDPPPAVKVFRNKAR 46
Query: 79 INRLQLVVSPNGSQVDFVGTNYSGEA 2
NRLQLVVSPN S+V+FVGT+YSGEA
Sbjct: 47 ANRLQLVVSPNDSKVNFVGTSYSGEA 72
>ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Vitis
vinifera]
Length = 421
Score = 87.8 bits (216), Expect = 3e-15
Identities = 45/86 (52%), Positives = 60/86 (69%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPPQPRVRIFRHEKK 80
+E + E+P+KI P+VGYFPSG+DP K +D E S P P V++FR++ +
Sbjct: 31 MEVVHEHPEKIPPLVGYFPSGFDP-------HKPQDHE-------SDPPPAVKVFRNKAR 76
Query: 79 INRLQLVVSPNGSQVDFVGTNYSGEA 2
NRLQLVVSPN S+V+FVGT+YSGEA
Sbjct: 77 ANRLQLVVSPNDSKVNFVGTSYSGEA 102
>ref|XP_009620774.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Nicotiana
tomentosiformis]
Length = 442
Score = 87.0 bits (214), Expect = 5e-15
Identities = 46/86 (53%), Positives = 56/86 (65%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPPQPRVRIFRHEKK 80
IET++ENP+K SPIVGYF SGYDPL+ +++R+ K+
Sbjct: 58 IETIAENPNKTSPIVGYFSSGYDPLRNNNNS--------------------AQLYRNVKR 97
Query: 79 INRLQLVVSPNGSQVDFVGTNYSGEA 2
NRLQLVVSPNG+QVDFVGTNYSGEA
Sbjct: 98 NNRLQLVVSPNGAQVDFVGTNYSGEA 123
>ref|XP_004240985.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Solanum
lycopersicum]
Length = 410
Score = 85.5 bits (210), Expect = 1e-14
Identities = 43/86 (50%), Positives = 58/86 (67%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPPQPRVRIFRHEKK 80
+ET++ENP+ ISP+VGYFPSGYDPL+ + + +++R+ ++
Sbjct: 21 METIAENPNNISPMVGYFPSGYDPLR---------------NTNDGVEELSTKLYRNVRR 65
Query: 79 INRLQLVVSPNGSQVDFVGTNYSGEA 2
NRLQ+VVSP GSQVDFVGTNYSGEA
Sbjct: 66 NNRLQVVVSPYGSQVDFVGTNYSGEA 91
>ref|XP_008462335.1| PREDICTED: uncharacterized protein LOC103500711 [Cucumis melo]
Length = 436
Score = 85.1 bits (209), Expect = 2e-14
Identities = 45/86 (52%), Positives = 54/86 (62%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPPQPRVRIFRHEKK 80
I+ LS P KI P+VGYFPSG+DP K + K +S S R R+++H K
Sbjct: 46 IQVLSNQPQKIPPVVGYFPSGFDPHK-----------DADKEQSHSV---RARVYKHRNK 91
Query: 79 INRLQLVVSPNGSQVDFVGTNYSGEA 2
NR+QLVVSP GS VDFVGTNY GEA
Sbjct: 92 PNRMQLVVSPTGSNVDFVGTNYLGEA 117
>ref|XP_009769328.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like isoform
X2 [Nicotiana sylvestris]
Length = 319
Score = 83.6 bits (205), Expect = 5e-14
Identities = 44/86 (51%), Positives = 55/86 (63%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPPQPRVRIFRHEKK 80
IET++E+P+K SPIVGYF SGYDPL+ +++R+ K+
Sbjct: 62 IETIAESPNKTSPIVGYFSSGYDPLRNNDS--------------------NAQLYRNVKR 101
Query: 79 INRLQLVVSPNGSQVDFVGTNYSGEA 2
NRLQLVVSPNG+ VDFVGTNYSGEA
Sbjct: 102 NNRLQLVVSPNGAPVDFVGTNYSGEA 127
>ref|XP_009769327.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like isoform
X1 [Nicotiana sylvestris]
Length = 446
Score = 83.6 bits (205), Expect = 5e-14
Identities = 44/86 (51%), Positives = 55/86 (63%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPPQPRVRIFRHEKK 80
IET++E+P+K SPIVGYF SGYDPL+ +++R+ K+
Sbjct: 62 IETIAESPNKTSPIVGYFSSGYDPLRNNDS--------------------NAQLYRNVKR 101
Query: 79 INRLQLVVSPNGSQVDFVGTNYSGEA 2
NRLQLVVSPNG+ VDFVGTNYSGEA
Sbjct: 102 NNRLQLVVSPNGAPVDFVGTNYSGEA 127
>gb|KJB21085.1| hypothetical protein B456_003G182300 [Gossypium raimondii]
Length = 391
Score = 83.2 bits (204), Expect = 7e-14
Identities = 40/88 (45%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPPQPRVRIFRH--E 86
I+ + P+KI P+V YFPSGY+P + + +D+E ++ SP P+V++FR+ +
Sbjct: 38 IQLFQDQPNKIPPLVAYFPSGYNP-----QTQQRQDEEESNNQNNSPKVPKVKVFRNMAQ 92
Query: 85 KKINRLQLVVSPNGSQVDFVGTNYSGEA 2
+K NRLQ+VVSP GS VDFVG++++GEA
Sbjct: 93 RKGNRLQVVVSPGGSNVDFVGSSFTGEA 120
>ref|XP_012472150.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Gossypium
raimondii] gi|763753696|gb|KJB21084.1| hypothetical
protein B456_003G182300 [Gossypium raimondii]
Length = 440
Score = 83.2 bits (204), Expect = 7e-14
Identities = 40/88 (45%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPPQPRVRIFRH--E 86
I+ + P+KI P+V YFPSGY+P + + +D+E ++ SP P+V++FR+ +
Sbjct: 38 IQLFQDQPNKIPPLVAYFPSGYNP-----QTQQRQDEEESNNQNNSPKVPKVKVFRNMAQ 92
Query: 85 KKINRLQLVVSPNGSQVDFVGTNYSGEA 2
+K NRLQ+VVSP GS VDFVG++++GEA
Sbjct: 93 RKGNRLQVVVSPGGSNVDFVGSSFTGEA 120
>ref|XP_004141689.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Cucumis
sativus] gi|700190278|gb|KGN45511.1| hypothetical
protein Csa_7G450680 [Cucumis sativus]
Length = 435
Score = 82.8 bits (203), Expect = 9e-14
Identities = 43/86 (50%), Positives = 55/86 (63%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPPQPRVRIFRHEKK 80
I+ LS P K P+VGYFPSG+DP K + K +S+S R R+++H+ +
Sbjct: 45 IQVLSNQPQKTPPVVGYFPSGFDPHK-----------DADKEQSRSV---RARVYKHKNR 90
Query: 79 INRLQLVVSPNGSQVDFVGTNYSGEA 2
NR+QLVVSP GS VDFVGTNY GEA
Sbjct: 91 PNRMQLVVSPTGSNVDFVGTNYLGEA 116
>gb|KHG20725.1| DNA-directed RNA polymerase I subunit rpa49 [Gossypium arboreum]
Length = 415
Score = 81.3 bits (199), Expect = 3e-13
Identities = 39/88 (44%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPPQPRVRIFRH--E 86
I+ + P+KI P+V YFPSGY+P + + +D+E ++ SP P+V+++R+ +
Sbjct: 38 IQLFQDQPNKIPPLVAYFPSGYNP-----QTQQRQDEEEPNNQNNSPKVPKVKVYRNMAQ 92
Query: 85 KKINRLQLVVSPNGSQVDFVGTNYSGEA 2
+K NRLQ+VVSP GS VDFVG++++GEA
Sbjct: 93 RKGNRLQVVVSPGGSNVDFVGSSFTGEA 120
>ref|XP_010087702.1| DNA-directed RNA polymerase I subunit rpa49 [Morus notabilis]
gi|587839011|gb|EXB29690.1| DNA-directed RNA polymerase
I subunit rpa49 [Morus notabilis]
Length = 438
Score = 78.6 bits (192), Expect = 2e-12
Identities = 42/86 (48%), Positives = 51/86 (59%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPPQPRVRIFRHEKK 80
I+ + P++ P+VGYFPSG+DP K D E S R+FR+ K
Sbjct: 47 IQVVQNQPERAPPLVGYFPSGFDP--------KDGDDE-------SSATAMARVFRNRNK 91
Query: 79 INRLQLVVSPNGSQVDFVGTNYSGEA 2
RLQLVVSPNG+ VDFVGTNYSGEA
Sbjct: 92 PKRLQLVVSPNGANVDFVGTNYSGEA 117
>ref|XP_009386771.1| PREDICTED: uncharacterized protein LOC103973833 [Musa acuminata
subsp. malaccensis]
Length = 424
Score = 78.6 bits (192), Expect = 2e-12
Identities = 39/86 (45%), Positives = 55/86 (63%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPPQPRVRIFRHEKK 80
+E LSE D+++P+VGYFPSGYDP G P +++FR++K+
Sbjct: 26 MEALSEAADRVAPVVGYFPSGYDPRGEGA-------------------DPSIKVFRNKKR 66
Query: 79 INRLQLVVSPNGSQVDFVGTNYSGEA 2
NRL+LVVSP+G+ VDFVG +Y+GEA
Sbjct: 67 PNRLELVVSPSGTGVDFVGKSYAGEA 92
>ref|XP_010937236.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Elaeis
guineensis]
Length = 425
Score = 77.8 bits (190), Expect = 3e-12
Identities = 42/86 (48%), Positives = 53/86 (61%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPPQPRVRIFRHEKK 80
+E LSE D+I+PIVGYFPSGYDP S + P VR+FR++
Sbjct: 22 MEVLSETTDRIAPIVGYFPSGYDPHNAA---------------SAAAGGPSVRVFRNQMY 66
Query: 79 INRLQLVVSPNGSQVDFVGTNYSGEA 2
+RL+LVVSP S V+FVGT+YSGEA
Sbjct: 67 SSRLELVVSPRDSNVEFVGTSYSGEA 92
>ref|XP_008783442.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Phoenix
dactylifera]
Length = 430
Score = 77.4 bits (189), Expect = 4e-12
Identities = 42/86 (48%), Positives = 53/86 (61%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPPQPRVRIFRHEKK 80
+E LSE D+I+PIVGYFPSGYDP S P VR+FR+++
Sbjct: 25 MEVLSETTDRIAPIVGYFPSGYDPHNAAFAAAGS---------------PSVRVFRNQRH 69
Query: 79 INRLQLVVSPNGSQVDFVGTNYSGEA 2
+RL+LVVSP S V+FVGT+YSGEA
Sbjct: 70 SSRLELVVSPRESNVEFVGTSYSGEA 95
>ref|XP_010273794.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Nelumbo
nucifera]
Length = 406
Score = 75.1 bits (183), Expect = 2e-11
Identities = 39/86 (45%), Positives = 57/86 (66%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPPQPRVRIFRHEKK 80
+E ++PDKI P+VGYFPSG++P +SE+++ K VR++ ++ +
Sbjct: 17 MEIFHQHPDKIPPLVGYFPSGFNP-------KRSEEEDSTK----------VRVYSNKNR 59
Query: 79 INRLQLVVSPNGSQVDFVGTNYSGEA 2
NRLQLVVSPN S+V+FVGT+YS EA
Sbjct: 60 PNRLQLVVSPNSSKVEFVGTSYSSEA 85
>ref|XP_002884998.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297330838|gb|EFH61257.1| DNA binding protein
[Arabidopsis lyrata subsp. lyrata]
Length = 443
Score = 75.1 bits (183), Expect = 2e-11
Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPPQPRVRIFRH-EK 83
+ +SE PD+ISPIV YF +GYDP K+ P E GK ++ P+V +++H +
Sbjct: 51 VTQVSERPDRISPIVAYFSTGYDPCKVDP--------ETGKRVHET---PKVTVYKHKDD 99
Query: 82 KINRLQLVVSPNGSQVDFVGTNYSGE 5
R+Q+VVSP G++V+FVGTNY+GE
Sbjct: 100 SKKRIQVVVSPPGARVEFVGTNYTGE 125
>gb|KNA24668.1| hypothetical protein SOVF_013550 [Spinacia oleracea]
Length = 412
Score = 74.7 bits (182), Expect = 3e-11
Identities = 38/86 (44%), Positives = 55/86 (63%)
Frame = -1
Query: 259 IETLSENPDKISPIVGYFPSGYDPLKLGPKPPKSEDQELGKPESQSPPQPRVRIFRHEKK 80
IE L E + +PI+GY+PSG+DPLK K P+S D + +R++KK
Sbjct: 26 IEMLKEKQEMNAPIIGYYPSGFDPLKR--KNPESSD---------------LFFYRNQKK 68
Query: 79 INRLQLVVSPNGSQVDFVGTNYSGEA 2
+ R++ VV PNGSQVD++G+N+SGEA
Sbjct: 69 LRRVEFVVKPNGSQVDYIGSNHSGEA 94