BLASTX nr result
ID: Cornus23_contig00002122
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00002122
(318 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002528993.1| conserved hypothetical protein [Ricinus comm... 68 3e-09
ref|XP_009342063.1| PREDICTED: regulation of nuclear pre-mRNA do... 63 1e-07
ref|XP_008245134.1| PREDICTED: regulation of nuclear pre-mRNA do... 62 2e-07
ref|XP_002276726.1| PREDICTED: CID domain-containing protein 1 [... 62 2e-07
ref|XP_007208477.1| hypothetical protein PRUPE_ppa004178mg [Prun... 62 2e-07
ref|XP_008374315.1| PREDICTED: regulation of nuclear pre-mRNA do... 58 2e-06
ref|XP_012075173.1| PREDICTED: UPF0400 protein C337.03 isoform X... 58 3e-06
ref|XP_012075171.1| PREDICTED: regulation of nuclear pre-mRNA do... 58 3e-06
ref|XP_011097607.1| PREDICTED: regulation of nuclear pre-mRNA do... 58 3e-06
gb|KDP35195.1| hypothetical protein JCGZ_09354 [Jatropha curcas] 58 3e-06
ref|XP_009772196.1| PREDICTED: regulation of nuclear pre-mRNA do... 57 7e-06
ref|XP_011005643.1| PREDICTED: regulation of nuclear pre-mRNA do... 56 9e-06
>ref|XP_002528993.1| conserved hypothetical protein [Ricinus communis]
gi|223531583|gb|EEF33412.1| conserved hypothetical
protein [Ricinus communis]
Length = 514
Score = 67.8 bits (164), Expect = 3e-09
Identities = 39/103 (37%), Positives = 50/103 (48%)
Frame = +2
Query: 8 YQSVLVXXXXXXXXXXXXXXXYHILPNPQSQQYLQPSGAIVSSYGYGSIXXXXXXXXXXX 187
YQSV++ YH+LPNP SQQY+QPSG I++ YGYGSI
Sbjct: 388 YQSVMLAPPTMQNQAPSSQAQYHMLPNPPSQQYMQPSGGIITPYGYGSISPLPPGPLPPP 447
Query: 188 XXMLSPLVXXXXXXXXXXXXXXXNLAHQPSALTQQQPILLPHQ 316
++SP+V L QPS +TQQQP+ L Q
Sbjct: 448 PYVVSPMVP---------------LNQQPSQITQQQPMPLAQQ 475
>ref|XP_009342063.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
1A [Pyrus x bretschneideri]
Length = 518
Score = 62.8 bits (151), Expect = 1e-07
Identities = 33/76 (43%), Positives = 38/76 (50%)
Frame = +2
Query: 71 YHILPNPQSQQYLQPSGAIVSSYGYGSIXXXXXXXXXXXXXMLSPLVXXXXXXXXXXXXX 250
+H+LPNP SQQYLQPSG ++S YGYGSI M+SPLV
Sbjct: 419 FHMLPNPPSQQYLQPSGGVMSPYGYGSIPHLPLGPPPPPPHMVSPLVPLAQQPLQMNQQP 478
Query: 251 XXNLAHQPSALTQQQP 298
N QP LTQ P
Sbjct: 479 VQNSQQQPIPLTQPPP 494
>ref|XP_008245134.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
1B [Prunus mume]
Length = 521
Score = 62.0 bits (149), Expect = 2e-07
Identities = 32/76 (42%), Positives = 39/76 (51%)
Frame = +2
Query: 71 YHILPNPQSQQYLQPSGAIVSSYGYGSIXXXXXXXXXXXXXMLSPLVXXXXXXXXXXXXX 250
+H+LPNP SQQYLQP+G ++SSYGYGSI M+SP+V
Sbjct: 424 FHMLPNPPSQQYLQPAGGVMSSYGYGSIPPLPLGPPPPPPHMVSPMVPLTQQPLQMNQQA 483
Query: 251 XXNLAHQPSALTQQQP 298
QP LTQQ P
Sbjct: 484 VQITQQQPIPLTQQPP 499
>ref|XP_002276726.1| PREDICTED: CID domain-containing protein 1 [Vitis vinifera]
Length = 524
Score = 62.0 bits (149), Expect = 2e-07
Identities = 38/106 (35%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +2
Query: 5 PYQSVLVXXXXXXXXXXXXXXXYHILPNPQSQQYLQPSGAIVSSYGYGSIXXXXXXXXXX 184
PYQSV++ YH+LPNP SQQYLQPSG I++ YGYGSI
Sbjct: 401 PYQSVIIAPPTMQSQTPTSQTQYHMLPNPPSQQYLQPSGGIMNPYGYGSIPPLPPGPPPP 460
Query: 185 XXX--MLSPLVXXXXXXXXXXXXXXXNLAHQPSALTQQQPILLPHQ 316
M++P+ L QP+ LT+ QP+ L Q
Sbjct: 461 PSTLHMVNPMAPLPQQQSIP-------LVQQPALLTRHQPMPLTQQ 499
>ref|XP_007208477.1| hypothetical protein PRUPE_ppa004178mg [Prunus persica]
gi|462404119|gb|EMJ09676.1| hypothetical protein
PRUPE_ppa004178mg [Prunus persica]
Length = 525
Score = 62.0 bits (149), Expect = 2e-07
Identities = 32/76 (42%), Positives = 39/76 (51%)
Frame = +2
Query: 71 YHILPNPQSQQYLQPSGAIVSSYGYGSIXXXXXXXXXXXXXMLSPLVXXXXXXXXXXXXX 250
+H+LPNP SQQYLQP+G ++SSYGYGSI M+SP+V
Sbjct: 428 FHMLPNPPSQQYLQPAGGVMSSYGYGSIPPLPLGPPPPPPHMVSPMVPLTQQPLQMNQQA 487
Query: 251 XXNLAHQPSALTQQQP 298
QP LTQQ P
Sbjct: 488 VQITQQQPIPLTQQPP 503
>ref|XP_008374315.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
1A isoform X1 [Malus domestica]
Length = 518
Score = 58.2 bits (139), Expect = 2e-06
Identities = 31/76 (40%), Positives = 37/76 (48%)
Frame = +2
Query: 71 YHILPNPQSQQYLQPSGAIVSSYGYGSIXXXXXXXXXXXXXMLSPLVXXXXXXXXXXXXX 250
+H+LPNP SQQYLQPSG ++S YGYGSI M+SP+V
Sbjct: 419 FHMLPNPPSQQYLQPSGGVMSPYGYGSIPHLPLGPPPPPPHMVSPMVPLAQQPLQMNQQP 478
Query: 251 XXNLAHQPSALTQQQP 298
N Q LTQ P
Sbjct: 479 VQNSQQQLIPLTQPPP 494
>ref|XP_012075173.1| PREDICTED: UPF0400 protein C337.03 isoform X2 [Jatropha curcas]
Length = 425
Score = 57.8 bits (138), Expect = 3e-06
Identities = 33/82 (40%), Positives = 43/82 (52%)
Frame = +2
Query: 71 YHILPNPQSQQYLQPSGAIVSSYGYGSIXXXXXXXXXXXXXMLSPLVXXXXXXXXXXXXX 250
+HI+PNP SQQYLQPSG +++ YGYG+ M+SP+V
Sbjct: 330 FHIIPNPSSQQYLQPSGPLMTPYGYGN--PMPPGPPPPPPYMVSPMVP------------ 375
Query: 251 XXNLAHQPSALTQQQPILLPHQ 316
L QPS +TQQQP+ L Q
Sbjct: 376 ---LTQQPSQITQQQPMPLAQQ 394
>ref|XP_012075171.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
2 isoform X1 [Jatropha curcas]
Length = 525
Score = 57.8 bits (138), Expect = 3e-06
Identities = 33/82 (40%), Positives = 43/82 (52%)
Frame = +2
Query: 71 YHILPNPQSQQYLQPSGAIVSSYGYGSIXXXXXXXXXXXXXMLSPLVXXXXXXXXXXXXX 250
+HI+PNP SQQYLQPSG +++ YGYG+ M+SP+V
Sbjct: 430 FHIIPNPSSQQYLQPSGPLMTPYGYGN--PMPPGPPPPPPYMVSPMVP------------ 475
Query: 251 XXNLAHQPSALTQQQPILLPHQ 316
L QPS +TQQQP+ L Q
Sbjct: 476 ---LTQQPSQITQQQPMPLAQQ 494
>ref|XP_011097607.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
1B-like [Sesamum indicum]
Length = 525
Score = 57.8 bits (138), Expect = 3e-06
Identities = 36/102 (35%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Frame = +2
Query: 2 NPYQSVLVXXXXXXXXXXXXXXXYHILPNPQSQQYLQPSGAIVSSYGYGSI--XXXXXXX 175
NPYQS++V YH +PNP S QY+QPSG I SY YGS+
Sbjct: 399 NPYQSIVVPQPSIPGQISSSQAHYHSIPNPTSLQYMQPSGGIAGSYDYGSLPPLPPGPPP 458
Query: 176 XXXXXXMLSPLVXXXXXXXXXXXXXXXNLAHQPSALTQQQPI 301
M+SP+V + HQ S L QQQ I
Sbjct: 459 PAPPSFMVSPMV--------PLMQQPLTMGHQQSTLAQQQSI 492
>gb|KDP35195.1| hypothetical protein JCGZ_09354 [Jatropha curcas]
Length = 472
Score = 57.8 bits (138), Expect = 3e-06
Identities = 33/82 (40%), Positives = 43/82 (52%)
Frame = +2
Query: 71 YHILPNPQSQQYLQPSGAIVSSYGYGSIXXXXXXXXXXXXXMLSPLVXXXXXXXXXXXXX 250
+HI+PNP SQQYLQPSG +++ YGYG+ M+SP+V
Sbjct: 377 FHIIPNPSSQQYLQPSGPLMTPYGYGN--PMPPGPPPPPPYMVSPMVP------------ 422
Query: 251 XXNLAHQPSALTQQQPILLPHQ 316
L QPS +TQQQP+ L Q
Sbjct: 423 ---LTQQPSQITQQQPMPLAQQ 441
>ref|XP_009772196.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
1B isoform X1 [Nicotiana sylvestris]
gi|698561681|ref|XP_009772197.1| PREDICTED: regulation
of nuclear pre-mRNA domain-containing protein 1B isoform
X1 [Nicotiana sylvestris]
Length = 515
Score = 56.6 bits (135), Expect = 7e-06
Identities = 36/104 (34%), Positives = 42/104 (40%)
Frame = +2
Query: 5 PYQSVLVXXXXXXXXXXXXXXXYHILPNPQSQQYLQPSGAIVSSYGYGSIXXXXXXXXXX 184
PYQS+LV YH LPNP QQYLQPS +VS YGYGSI
Sbjct: 395 PYQSMLVPHPTVHSQMPNSQGQYHSLPNPTPQQYLQPSAGMVSPYGYGSIPALPSVPP-- 452
Query: 185 XXXMLSPLVXXXXXXXXXXXXXXXNLAHQPSALTQQQPILLPHQ 316
P ++ Q +L QQQ + LP Q
Sbjct: 453 -----PPAPPSYMTTMVPLTQQQLSMVQQQQSLAQQQQVPLPQQ 491
>ref|XP_011005643.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
1B-like [Populus euphratica]
Length = 523
Score = 56.2 bits (134), Expect = 9e-06
Identities = 35/107 (32%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Frame = +2
Query: 8 YQSVLVXXXXXXXXXXXXXXXYHILPNPQSQQYLQPSGAIVSSYGYGSI----XXXXXXX 175
YQSVL+ +H+LPN SQQYLQP+G I++ Y YG+I
Sbjct: 394 YQSVLLPQPSMQNQTPSTQAQFHMLPNQSSQQYLQPAGGIMTPYAYGNISPLPPGPPPPP 453
Query: 176 XXXXXXMLSPLVXXXXXXXXXXXXXXXNLAHQPSALTQQQPILLPHQ 316
M+SP+V LA Q + + QQQP+ L Q
Sbjct: 454 PPPPPYMVSPMVSMGQQPSQIPQQQPLPLAQQQATINQQQPMSLTQQ 500