BLASTX nr result
ID: Cornus23_contig00001529
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00001529
(287 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, c... 87 5e-15
ref|XP_010692650.1| PREDICTED: 50S ribosomal protein 6, chloropl... 87 6e-15
ref|XP_010245611.1| PREDICTED: 50S ribosomal protein 6, chloropl... 85 2e-14
gb|KFK26009.1| hypothetical protein AALP_AA8G191100 [Arabis alpina] 85 2e-14
ref|XP_008361594.1| PREDICTED: 50S ribosomal protein 6, chloropl... 85 2e-14
ref|XP_010453990.1| PREDICTED: 50S ribosomal protein 6, chloropl... 84 4e-14
ref|XP_010420516.1| PREDICTED: 50S ribosomal protein 6, chloropl... 84 4e-14
ref|XP_009335472.1| PREDICTED: 50S ribosomal protein 6, chloropl... 84 4e-14
ref|XP_006356805.1| PREDICTED: 50S ribosomal protein 6, chloropl... 83 7e-14
ref|XP_008378687.1| PREDICTED: 50S ribosomal protein 6, chloropl... 82 2e-13
ref|XP_010059843.1| PREDICTED: 50S ribosomal protein 6, chloropl... 82 2e-13
ref|XP_008219146.1| PREDICTED: 50S ribosomal protein 6, chloropl... 82 2e-13
gb|KCW66283.1| hypothetical protein EUGRSUZ_F00111 [Eucalyptus g... 82 2e-13
ref|XP_013622786.1| PREDICTED: 50S ribosomal protein 6, chloropl... 81 3e-13
ref|XP_008352748.1| PREDICTED: 50S ribosomal protein 6, chloropl... 81 3e-13
ref|XP_004238050.1| PREDICTED: 50S ribosomal protein 6, chloropl... 81 3e-13
ref|XP_010492753.1| PREDICTED: 50S ribosomal protein 6, chloropl... 80 6e-13
ref|NP_568358.1| plastid-specific 50S ribosomal protein 6 [Arabi... 80 6e-13
ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arab... 80 6e-13
ref|XP_009762288.1| PREDICTED: 50S ribosomal protein 6, chloropl... 80 8e-13
>sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, chloroplastic; AltName:
Full=CL25; AltName: Full=Plastid-specific 50S ribosomal
protein 6; Short=PSRP-6; Flags: Precursor [Spinacia
oleracea] gi|7578927|gb|AAF64189.1|AF245292_1
plastid-specific ribosomal protein 6 precursor [Spinacia
oleracea] gi|902213141|gb|KNA17188.1| hypothetical
protein SOVF_082300 [Spinacia oleracea]
Length = 116
Score = 87.0 bits (214), Expect = 5e-15
Identities = 47/90 (52%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Frame = -2
Query: 259 MSVSAILGSRVVVVPNYCSFSN----SVAXXXXXXXXXXXXGLVIECSSRPKKKATAHHR 92
MSVSAI G+RVV +P+ S+ +V + IECSSRP+KK TAHH
Sbjct: 1 MSVSAIFGARVVTIPSVLRTSSVDGRTVKLQPSTGGSCGGGVITIECSSRPQKKGTAHHM 60
Query: 91 KTRPKKTQLWDIKRGPTVYXXXXXXPAEWT 2
KTRPKKT WDIKRGP VY PAEWT
Sbjct: 61 KTRPKKTARWDIKRGPAVYPPLPPLPAEWT 90
>ref|XP_010692650.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Beta vulgaris
subsp. vulgaris] gi|870847272|gb|KMS99666.1|
hypothetical protein BVRB_1g021720 [Beta vulgaris subsp.
vulgaris]
Length = 103
Score = 86.7 bits (213), Expect = 6e-15
Identities = 48/86 (55%), Positives = 56/86 (65%)
Frame = -2
Query: 259 MSVSAILGSRVVVVPNYCSFSNSVAXXXXXXXXXXXXGLVIECSSRPKKKATAHHRKTRP 80
MSVSAI G+R+ +P+ S S V +VIECSSRP+KKATAHHRKTRP
Sbjct: 1 MSVSAIFGTRIAAMPSMVS-SRGVKMQPSSVG------VVIECSSRPQKKATAHHRKTRP 53
Query: 79 KKTQLWDIKRGPTVYXXXXXXPAEWT 2
+KTQ WDIKR PTVY PA+WT
Sbjct: 54 RKTQPWDIKRRPTVYPALPPLPADWT 79
>ref|XP_010245611.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Nelumbo
nucifera]
Length = 97
Score = 85.1 bits (209), Expect = 2e-14
Identities = 48/86 (55%), Positives = 56/86 (65%)
Frame = -2
Query: 259 MSVSAILGSRVVVVPNYCSFSNSVAXXXXXXXXXXXXGLVIECSSRPKKKATAHHRKTRP 80
MSVSA+ G+RV+V PN S+A G+VIECSSRPKKKATAHH KTRP
Sbjct: 1 MSVSALFGTRVMV-PN-----KSLAVGAPKGGRAGGMGMVIECSSRPKKKATAHHMKTRP 54
Query: 79 KKTQLWDIKRGPTVYXXXXXXPAEWT 2
KKTQ WD++R PTVY P +WT
Sbjct: 55 KKTQPWDVRRRPTVYPPLPPLPPDWT 80
>gb|KFK26009.1| hypothetical protein AALP_AA8G191100 [Arabis alpina]
Length = 106
Score = 84.7 bits (208), Expect = 2e-14
Identities = 48/86 (55%), Positives = 56/86 (65%)
Frame = -2
Query: 259 MSVSAILGSRVVVVPNYCSFSNSVAXXXXXXXXXXXXGLVIECSSRPKKKATAHHRKTRP 80
MSVSAI G+ +V V + S ++ G+VIECSSRP+KK+TAHHRKTRP
Sbjct: 1 MSVSAIFGTGLVTV----AASPALRQFQVPKLGNGGLGMVIECSSRPQKKSTAHHRKTRP 56
Query: 79 KKTQLWDIKRGPTVYXXXXXXPAEWT 2
KKTQ WDIKR PTVY PAEWT
Sbjct: 57 KKTQPWDIKRKPTVYAPLPPLPAEWT 82
>ref|XP_008361594.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Malus
domestica]
Length = 119
Score = 84.7 bits (208), Expect = 2e-14
Identities = 53/96 (55%), Positives = 59/96 (61%), Gaps = 10/96 (10%)
Frame = -2
Query: 259 MSVSAILGSRVVVV-------PNYCSF--SNSVAXXXXXXXXXXXXG-LVIECSSRPKKK 110
MSVSA+LGS +V V P SF +NS G LVIECSSRP+KK
Sbjct: 1 MSVSAVLGSHLVPVGVAVKNPPAMTSFGVTNSAPWHGSTTGNGGGGGGLVIECSSRPQKK 60
Query: 109 ATAHHRKTRPKKTQLWDIKRGPTVYXXXXXXPAEWT 2
ATAHHRKTRP+KTQ WD+KR PTVY PAEWT
Sbjct: 61 ATAHHRKTRPRKTQPWDVKRKPTVYASLPPLPAEWT 96
>ref|XP_010453990.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Camelina
sativa]
Length = 113
Score = 84.0 bits (206), Expect = 4e-14
Identities = 45/86 (52%), Positives = 52/86 (60%)
Frame = -2
Query: 259 MSVSAILGSRVVVVPNYCSFSNSVAXXXXXXXXXXXXGLVIECSSRPKKKATAHHRKTRP 80
MSVSAI G+ +V V G+VIECSSRP+KK+TAHHRK+RP
Sbjct: 1 MSVSAIFGTGIVTVAAASPVLRQFQVPKLGNGVGGGLGMVIECSSRPQKKSTAHHRKSRP 60
Query: 79 KKTQLWDIKRGPTVYXXXXXXPAEWT 2
KKTQ WD+KR PTVY PAEWT
Sbjct: 61 KKTQPWDVKRKPTVYAPLPPLPAEWT 86
>ref|XP_010420516.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Camelina sativa]
Length = 114
Score = 84.0 bits (206), Expect = 4e-14
Identities = 45/86 (52%), Positives = 52/86 (60%)
Frame = -2
Query: 259 MSVSAILGSRVVVVPNYCSFSNSVAXXXXXXXXXXXXGLVIECSSRPKKKATAHHRKTRP 80
MSVSAI G+ +V V G+VIECSSRP+KK+TAHHRK+RP
Sbjct: 1 MSVSAIFGTGIVTVAAASPVLRQFQVPKLGNGGGGGLGMVIECSSRPQKKSTAHHRKSRP 60
Query: 79 KKTQLWDIKRGPTVYXXXXXXPAEWT 2
KKTQ WD+KR PTVY PAEWT
Sbjct: 61 KKTQPWDVKRKPTVYAPLPPLPAEWT 86
>ref|XP_009335472.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Pyrus x
bretschneideri]
Length = 119
Score = 84.0 bits (206), Expect = 4e-14
Identities = 50/96 (52%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Frame = -2
Query: 259 MSVSAILGSRVVVV----------PNYCSFSNSVAXXXXXXXXXXXXGLVIECSSRPKKK 110
MSVSA+LGS+ V V ++ S++ GLVIECSSRP+KK
Sbjct: 1 MSVSAVLGSQFVAVGVPVKNPSATASFGVTSSAPWRGSTTGNGGGGGGLVIECSSRPQKK 60
Query: 109 ATAHHRKTRPKKTQLWDIKRGPTVYXXXXXXPAEWT 2
ATAHHRKTRP+KTQ WDIKR PTVY PAEWT
Sbjct: 61 ATAHHRKTRPRKTQPWDIKRKPTVYAPLPPLPAEWT 96
>ref|XP_006356805.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Solanum
tuberosum]
Length = 111
Score = 83.2 bits (204), Expect = 7e-14
Identities = 45/89 (50%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Frame = -2
Query: 259 MSVSAILGSRVVVVPNYCSFSNSV---AXXXXXXXXXXXXGLVIECSSRPKKKATAHHRK 89
MS SAI G ++VV+P + S + GLVIECSSRP+KKATAHH+K
Sbjct: 1 MSASAIFGLQMVVLPRSSTVSTTGFTGGATRLAAAPTSVGGLVIECSSRPQKKATAHHKK 60
Query: 88 TRPKKTQLWDIKRGPTVYXXXXXXPAEWT 2
TRP+KTQ WDI+RGP VY P+EW+
Sbjct: 61 TRPRKTQAWDIRRGPAVYAPLPPLPSEWS 89
>ref|XP_008378687.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Malus domestica]
Length = 119
Score = 82.0 bits (201), Expect = 2e-13
Identities = 48/96 (50%), Positives = 57/96 (59%), Gaps = 10/96 (10%)
Frame = -2
Query: 259 MSVSAILGSRVVVV----------PNYCSFSNSVAXXXXXXXXXXXXGLVIECSSRPKKK 110
MSVSA+LGS+ V V ++ S++ G VIECSSRP+KK
Sbjct: 1 MSVSAVLGSQFVAVGVPVKNPSATASFGVTSSAPWRGSTTGNGGGGDGFVIECSSRPQKK 60
Query: 109 ATAHHRKTRPKKTQLWDIKRGPTVYXXXXXXPAEWT 2
ATAHHRKTRP+KTQ WD+KR PTVY PAEWT
Sbjct: 61 ATAHHRKTRPRKTQPWDVKRKPTVYAPLPPLPAEWT 96
>ref|XP_010059843.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Eucalyptus
grandis]
Length = 129
Score = 81.6 bits (200), Expect = 2e-13
Identities = 41/86 (47%), Positives = 52/86 (60%)
Frame = -2
Query: 259 MSVSAILGSRVVVVPNYCSFSNSVAXXXXXXXXXXXXGLVIECSSRPKKKATAHHRKTRP 80
MS+SAI G+R+ V P + S ++ECSSRP+KKATAHH+KTRP
Sbjct: 1 MSISAIFGTRIPVAPPPPAGSAPPKAAQRLAGGWGGTVSIVECSSRPQKKATAHHKKTRP 60
Query: 79 KKTQLWDIKRGPTVYXXXXXXPAEWT 2
+KTQ WDI+R PTVY P +WT
Sbjct: 61 RKTQAWDIRRKPTVYAPLPPLPPDWT 86
>ref|XP_008219146.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Prunus mume]
Length = 112
Score = 81.6 bits (200), Expect = 2e-13
Identities = 46/92 (50%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Frame = -2
Query: 259 MSVSAILGSRVVVV------PNYCSFSNSVAXXXXXXXXXXXXGLVIECSSRPKKKATAH 98
MSVSA+LG ++V V P+ + GL+IECSSRP+KKATAH
Sbjct: 1 MSVSAVLGPQLVAVGVAVKNPSATASFGVPKTSPWRGSVGGGTGLMIECSSRPQKKATAH 60
Query: 97 HRKTRPKKTQLWDIKRGPTVYXXXXXXPAEWT 2
HRKTRP+KTQ WD+KR PTVY PA+WT
Sbjct: 61 HRKTRPRKTQPWDVKRKPTVYTPLPPLPADWT 92
>gb|KCW66283.1| hypothetical protein EUGRSUZ_F00111 [Eucalyptus grandis]
Length = 176
Score = 81.6 bits (200), Expect = 2e-13
Identities = 41/86 (47%), Positives = 52/86 (60%)
Frame = -2
Query: 259 MSVSAILGSRVVVVPNYCSFSNSVAXXXXXXXXXXXXGLVIECSSRPKKKATAHHRKTRP 80
MS+SAI G+R+ V P + S ++ECSSRP+KKATAHH+KTRP
Sbjct: 47 MSISAIFGTRIPVAPPPPAGSAPPKAAQRLAGGWGGTVSIVECSSRPQKKATAHHKKTRP 106
Query: 79 KKTQLWDIKRGPTVYXXXXXXPAEWT 2
+KTQ WDI+R PTVY P +WT
Sbjct: 107 RKTQAWDIRRKPTVYAPLPPLPPDWT 132
>ref|XP_013622786.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Brassica
oleracea var. oleracea] gi|923780411|ref|XP_013681812.1|
PREDICTED: 50S ribosomal protein 6, chloroplastic
[Brassica napus] gi|674962777|emb|CDX70780.1|
BnaC03g08640D [Brassica napus]
Length = 109
Score = 80.9 bits (198), Expect = 3e-13
Identities = 43/86 (50%), Positives = 52/86 (60%)
Frame = -2
Query: 259 MSVSAILGSRVVVVPNYCSFSNSVAXXXXXXXXXXXXGLVIECSSRPKKKATAHHRKTRP 80
MSVSAI G+ + V + + G+VIECSSRP+KK+TAHHRKTRP
Sbjct: 1 MSVSAIFGTGIATVASSPALRQFQVPKLGNGGVGGGLGMVIECSSRPQKKSTAHHRKTRP 60
Query: 79 KKTQLWDIKRGPTVYXXXXXXPAEWT 2
KKTQ WDIKR PTVY P +W+
Sbjct: 61 KKTQPWDIKRKPTVYAPLPPLPPDWS 86
>ref|XP_008352748.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Malus
domestica]
Length = 119
Score = 80.9 bits (198), Expect = 3e-13
Identities = 47/96 (48%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Frame = -2
Query: 259 MSVSAILGSRVVVV----------PNYCSFSNSVAXXXXXXXXXXXXGLVIECSSRPKKK 110
MSVS++LGS +V V ++ +++ GLVIECSSRP+KK
Sbjct: 1 MSVSSVLGSHLVPVGVAVKNPAAMTSFGVTNSAPWHGSTTGNGGGGGGLVIECSSRPQKK 60
Query: 109 ATAHHRKTRPKKTQLWDIKRGPTVYXXXXXXPAEWT 2
ATAHHRKTRP+KTQ WD+KR PTVY PAEWT
Sbjct: 61 ATAHHRKTRPRKTQPWDVKRKPTVYASLPPLPAEWT 96
>ref|XP_004238050.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Solanum
lycopersicum]
Length = 111
Score = 80.9 bits (198), Expect = 3e-13
Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Frame = -2
Query: 259 MSVSAILGSRVVVVPNYCSFSNSV---AXXXXXXXXXXXXGLVIECSSRPKKKATAHHRK 89
MS SAI G ++ V+P + S + GLVIECSSRP+KKATAHH+K
Sbjct: 1 MSASAIFGLQMAVLPRSSTVSATGFTGGATRLASAPTSIGGLVIECSSRPQKKATAHHKK 60
Query: 88 TRPKKTQLWDIKRGPTVYXXXXXXPAEWT 2
TRP+KTQ WDI+RGP VY P+EW+
Sbjct: 61 TRPRKTQAWDIRRGPAVYAPLPPLPSEWS 89
>ref|XP_010492753.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Camelina
sativa]
Length = 135
Score = 80.1 bits (196), Expect = 6e-13
Identities = 44/88 (50%), Positives = 52/88 (59%)
Frame = -2
Query: 265 QKMSVSAILGSRVVVVPNYCSFSNSVAXXXXXXXXXXXXGLVIECSSRPKKKATAHHRKT 86
+ MSVSAI G+ +V V +VIECSSRP+KK+TAHHRK+
Sbjct: 23 ETMSVSAIFGTGIVTVAAASPVLRQFQVPKLGNGGGGLG-MVIECSSRPQKKSTAHHRKS 81
Query: 85 RPKKTQLWDIKRGPTVYXXXXXXPAEWT 2
RPKKTQ WD+KR PTVY PAEWT
Sbjct: 82 RPKKTQPWDVKRKPTVYAPLPPLPAEWT 109
>ref|NP_568358.1| plastid-specific 50S ribosomal protein 6 [Arabidopsis thaliana]
gi|75171293|sp|Q9FKP0.1|PSRP6_ARATH RecName: Full=50S
ribosomal protein 6, chloroplastic; AltName: Full=CL25;
AltName: Full=Plastid-specific 50S ribosomal protein 6;
Short=PSRP-6; Flags: Precursor
gi|10177888|dbj|BAB11220.1| unnamed protein product
[Arabidopsis thaliana] gi|14517428|gb|AAK62604.1|
AT5g17870/MPI7_10 [Arabidopsis thaliana]
gi|20147339|gb|AAM10383.1| AT5g17870/MPI7_10
[Arabidopsis thaliana] gi|21554906|gb|AAM63726.1|
plastid-specific ribosomal protein 6 precursor
(Psrp-6)-like [Arabidopsis thaliana]
gi|332005097|gb|AED92480.1| plastid-specific 50S
ribosomal protein 6 [Arabidopsis thaliana]
Length = 106
Score = 80.1 bits (196), Expect = 6e-13
Identities = 48/89 (53%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Frame = -2
Query: 259 MSVSAILGSRVVVV---PNYCSFSNSVAXXXXXXXXXXXXGLVIECSSRPKKKATAHHRK 89
MSVSAI G+ +V V P F G+VIECSSRP+KK+TAHHRK
Sbjct: 1 MSVSAIFGTGIVTVAASPVLRQFQ------VPKLGNGGGLGMVIECSSRPQKKSTAHHRK 54
Query: 88 TRPKKTQLWDIKRGPTVYXXXXXXPAEWT 2
TRPKKTQ WDIKR PTVY PAEW+
Sbjct: 55 TRPKKTQPWDIKRKPTVYAPLPPLPAEWS 83
>ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arabidopsis lyrata subsp.
lyrata] gi|297317621|gb|EFH48043.1| hypothetical protein
ARALYDRAFT_488653 [Arabidopsis lyrata subsp. lyrata]
Length = 108
Score = 80.1 bits (196), Expect = 6e-13
Identities = 48/89 (53%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Frame = -2
Query: 259 MSVSAILGSRVVVV---PNYCSFSNSVAXXXXXXXXXXXXGLVIECSSRPKKKATAHHRK 89
MSVSAI G+ +V V P F G+VIECSSRP+KK+TAHHRK
Sbjct: 1 MSVSAIFGTGIVTVAASPVLRQFQ------VPTLGNGGGLGMVIECSSRPQKKSTAHHRK 54
Query: 88 TRPKKTQLWDIKRGPTVYXXXXXXPAEWT 2
+RPKKTQ WDIKR PTVY PAEWT
Sbjct: 55 SRPKKTQPWDIKRKPTVYAPLPPLPAEWT 83
>ref|XP_009762288.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Nicotiana
sylvestris]
Length = 105
Score = 79.7 bits (195), Expect = 8e-13
Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Frame = -2
Query: 259 MSVSAILGSRVVVVPNYCSFSNSV---AXXXXXXXXXXXXGLVIECSSRPKKKATAHHRK 89
MS SAI G ++ V+P + S + GL IECSSRP+KKATAHH+K
Sbjct: 1 MSASAIFGLKMAVLPRSSTVSTTGFYGGATKLAAAPKSVGGLAIECSSRPQKKATAHHKK 60
Query: 88 TRPKKTQLWDIKRGPTVYXXXXXXPAEWT 2
TRP+KTQ WDI+RGP VY P EW+
Sbjct: 61 TRPRKTQAWDIRRGPAVYPPLPALPPEWS 89