BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00001502
         (2715 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010657968.1| PREDICTED: regulator of nonsense transcripts...   616   e-173
ref|XP_010657969.1| PREDICTED: regulator of nonsense transcripts...   614   e-172
ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts...   614   e-172
emb|CDO97628.1| unnamed protein product [Coffea canephora]            581   e-162
ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Popu...   577   e-161
ref|XP_012066696.1| PREDICTED: regulator of nonsense transcripts...   575   e-161
ref|XP_011028362.1| PREDICTED: regulator of nonsense transcripts...   575   e-161
ref|XP_012066695.1| PREDICTED: regulator of nonsense transcripts...   575   e-161
ref|XP_006385052.1| Smg-4/UPF3 family protein [Populus trichocar...   570   e-159
ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr...   568   e-159
ref|XP_011028363.1| PREDICTED: regulator of nonsense transcripts...   567   e-158
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts...   567   e-158
ref|XP_007041200.1| Smg-4/UPF3 family protein, putative isoform ...   547   e-152
ref|XP_008218705.1| PREDICTED: regulator of nonsense transcripts...   546   e-152
ref|XP_002526435.1| conserved hypothetical protein [Ricinus comm...   541   e-151
ref|XP_009587503.1| PREDICTED: regulator of nonsense transcripts...   540   e-150
ref|XP_011047885.1| PREDICTED: regulator of nonsense transcripts...   540   e-150
ref|XP_011047883.1| PREDICTED: regulator of nonsense transcripts...   539   e-150
ref|XP_011092289.1| PREDICTED: regulator of nonsense transcripts...   537   e-149
ref|XP_007221816.1| hypothetical protein PRUPE_ppa004923mg [Prun...   536   e-149

>ref|XP_010657968.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X2 [Vitis
            vinifera]
          Length = 515

 Score =  616 bits (1589), Expect = e-173
 Identities = 336/522 (64%), Positives = 375/522 (71%), Gaps = 4/522 (0%)
 Frame = -3

Query: 2332 MKGSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYIDF 2153
            MKG LDRTKVV+RHLPP IS++   EQID  F  RY  + FRPGKNSQKRQSYSRAY+DF
Sbjct: 1    MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60

Query: 2152 KRPEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYLE 1973
            KRPEDV+EFAEFFDGHVFVNEKGTQFKTIVEYAPSQR+PK W KKDGREGTIFKDPEY+E
Sbjct: 61   KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYME 120

Query: 1972 FLEFIAKPVENLPSAEIQLERREAERAGTSKDAPIITPLMDFVRQKRASKVGSRRSLSNG 1793
            F+E +AKPVENLPSAEIQLERREAERAG  KD PI+TPLMDFVRQKRA+K  SRRSLSNG
Sbjct: 121  FVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNG 180

Query: 1792 KLXXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQH 1613
            KL                   G  KRR STTMYVLR+TAKSTS KDKST+ILVP+RDDQ 
Sbjct: 181  KLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQL 240

Query: 1612 PADKS-STPAASGAEALEVESGVPRTNDXXXXXXXXXXXXXXXIPHLTGGVQSATFPVKS 1436
             +DKS +  A  GAEALE ESGV    D               I H     Q+ T PVK+
Sbjct: 241  LSDKSVNLAAGGGAEALEEESGVSGAVDAGKKKVLLLKGKEREISH-----QNVTSPVKN 295

Query: 1435 SLGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPRPPN 1256
             LG+ + KQN RRE SG+IIRSIL NKD                   +LEK+KRPPRPP+
Sbjct: 296  ILGANAPKQNQRREGSGRIIRSILLNKDARQ-SQSSMFQTEQQSQASNLEKEKRPPRPPH 354

Query: 1255 VQLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXXXXX 1076
            +QL  K+TNGA +DK VGND+H F SEKQ+KRTRNKDRPDRGVWTPLRR           
Sbjct: 355  IQLASKETNGAQDDKVVGNDVHSFVSEKQDKRTRNKDRPDRGVWTPLRR--SDGSHASDE 412

Query: 1075 XXXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVKTL--GRISHSSLDNGSYKHGGRRGP 902
                           EGSHGE R+DMSNARSGEVK L  GR  HS+LDNGS+KH GRRGP
Sbjct: 413  SLSSSASQPTSSDFPEGSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSGRRGP 472

Query: 901  SHNVKDGDVSSVMNEGKPSKRGSS-SYGSHEKQVWVQKSSSG 779
            +H+VKD D SS+++EGK SKRGS+  YGSHEKQVWVQKSSSG
Sbjct: 473  THSVKDADGSSIVSEGKHSKRGSAPGYGSHEKQVWVQKSSSG 514


>ref|XP_010657969.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X3 [Vitis
            vinifera]
          Length = 514

 Score =  614 bits (1583), Expect = e-172
 Identities = 335/522 (64%), Positives = 374/522 (71%), Gaps = 4/522 (0%)
 Frame = -3

Query: 2332 MKGSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYIDF 2153
            MKG LDRTKVV+RHLPP IS++   EQID  F  RY  + FRPGKNSQKRQSYSRAY+DF
Sbjct: 1    MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60

Query: 2152 KRPEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYLE 1973
            KRPEDV+EFAEFFDGHVFVNEKGTQFKTIVEYAPSQR+PK W KKDGREGTIFKDPEY+E
Sbjct: 61   KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYME 120

Query: 1972 FLEFIAKPVENLPSAEIQLERREAERAGTSKDAPIITPLMDFVRQKRASKVGSRRSLSNG 1793
            F+E +AKPVENLPSAEIQLERREAERAG  KD PI+TPLMDFVRQKRA+K  SRRSLSNG
Sbjct: 121  FVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNG 180

Query: 1792 KLXXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQH 1613
            KL                   G  KRR STTMYVLR+TAKSTS KDKST+ILVP+RDDQ 
Sbjct: 181  KLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQL 240

Query: 1612 PADKS-STPAASGAEALEVESGVPRTNDXXXXXXXXXXXXXXXIPHLTGGVQSATFPVKS 1436
             +DKS +  A  GAEALE ESGV    D               I H      + T PVK+
Sbjct: 241  LSDKSVNLAAGGGAEALEEESGVSGAVDAGKKKVLLLKGKEREISH------NVTSPVKN 294

Query: 1435 SLGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPRPPN 1256
             LG+ + KQN RRE SG+IIRSIL NKD                   +LEK+KRPPRPP+
Sbjct: 295  ILGANAPKQNQRREGSGRIIRSILLNKDARQ-SQSSMFQTEQQSQASNLEKEKRPPRPPH 353

Query: 1255 VQLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXXXXX 1076
            +QL  K+TNGA +DK VGND+H F SEKQ+KRTRNKDRPDRGVWTPLRR           
Sbjct: 354  IQLASKETNGAQDDKVVGNDVHSFVSEKQDKRTRNKDRPDRGVWTPLRR--SDGSHASDE 411

Query: 1075 XXXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVKTL--GRISHSSLDNGSYKHGGRRGP 902
                           EGSHGE R+DMSNARSGEVK L  GR  HS+LDNGS+KH GRRGP
Sbjct: 412  SLSSSASQPTSSDFPEGSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSGRRGP 471

Query: 901  SHNVKDGDVSSVMNEGKPSKRGSS-SYGSHEKQVWVQKSSSG 779
            +H+VKD D SS+++EGK SKRGS+  YGSHEKQVWVQKSSSG
Sbjct: 472  THSVKDADGSSIVSEGKHSKRGSAPGYGSHEKQVWVQKSSSG 513


>ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Vitis
            vinifera] gi|297739512|emb|CBI29694.3| unnamed protein
            product [Vitis vinifera]
          Length = 519

 Score =  614 bits (1583), Expect = e-172
 Identities = 336/522 (64%), Positives = 375/522 (71%), Gaps = 4/522 (0%)
 Frame = -3

Query: 2332 MKGSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYIDF 2153
            MKG LDRTKVV+RHLPP IS++   EQID  F  RY  + FRPGKNSQKRQSYSRAY+DF
Sbjct: 1    MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60

Query: 2152 KRPEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYLE 1973
            KRPEDV+EFAEFFDGHVFVNEKGTQFKTIVEYAPSQR+PK W KKDGREGTIFKDPEY+E
Sbjct: 61   KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYME 120

Query: 1972 FLEFIAKPVENLPSAEIQLERREAERAGTSKDAPIITPLMDFVRQKRASKVGSRRSLSNG 1793
            F+E +AKPVENLPSAEIQLERREAERAG  KD PI+TPLMDFVRQKRA+K  SRRSLSNG
Sbjct: 121  FVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNG 180

Query: 1792 KLXXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQH 1613
            KL                   G  KRR STTMYVLR+TAKSTS KDKST+ILVP+RDDQ 
Sbjct: 181  KLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQL 240

Query: 1612 PADKS-STPAASGAEALEVESGVPRTNDXXXXXXXXXXXXXXXIPHLTGGVQSATFPVKS 1436
             +DKS +  A  GAEALE ESGV    D               I H     Q+ T PVK+
Sbjct: 241  LSDKSVNLAAGGGAEALEEESGVSGAVDAGKKKVLLLKGKEREISHHL-LQQNVTSPVKN 299

Query: 1435 SLGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPRPPN 1256
             LG+ + KQN RRE SG+IIRSIL NKD                   +LEK+KRPPRPP+
Sbjct: 300  ILGANAPKQNQRREGSGRIIRSILLNKDARQ-SQSSMFQTEQQSQASNLEKEKRPPRPPH 358

Query: 1255 VQLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXXXXX 1076
            +QL  K+TNGA +DK VGND+H F SEKQ+KRTRNKDRPDRGVWTPLRR           
Sbjct: 359  IQLASKETNGAQDDKVVGNDVHSFVSEKQDKRTRNKDRPDRGVWTPLRR--SDGSHASDE 416

Query: 1075 XXXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVKTL--GRISHSSLDNGSYKHGGRRGP 902
                           EGSHGE R+DMSNARSGEVK L  GR  HS+LDNGS+KH GRRGP
Sbjct: 417  SLSSSASQPTSSDFPEGSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSGRRGP 476

Query: 901  SHNVKDGDVSSVMNEGKPSKRGSS-SYGSHEKQVWVQKSSSG 779
            +H+VKD D SS+++EGK SKRGS+  YGSHEKQVWVQKSSSG
Sbjct: 477  THSVKDADGSSIVSEGKHSKRGSAPGYGSHEKQVWVQKSSSG 518


>emb|CDO97628.1| unnamed protein product [Coffea canephora]
          Length = 517

 Score =  581 bits (1498), Expect = e-162
 Identities = 328/525 (62%), Positives = 375/525 (71%), Gaps = 6/525 (1%)
 Frame = -3

Query: 2332 MKGSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYIDF 2153
            MKG LDRTKVVLRHLPP+ISQS L +Q++ RF+ RYNW+SFRPGK SQKRQSYSRAYIDF
Sbjct: 1    MKGPLDRTKVVLRHLPPSISQSSLMDQVETRFSGRYNWVSFRPGKTSQKRQSYSRAYIDF 60

Query: 2152 KRPEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYLE 1973
            KRPEDV+EFAEFFDGHVFVNEKGTQFKT+VEY PSQRVPKQWSKKDGREGTI KDPEYLE
Sbjct: 61   KRPEDVIEFAEFFDGHVFVNEKGTQFKTVVEYGPSQRVPKQWSKKDGREGTILKDPEYLE 120

Query: 1972 FLEFIAKPVENLPSAEIQLERREAERAGTSKDAPIITPLMDFVRQKRASKVGSRRSLSNG 1793
            FLEF+AKPVENLPSAEIQLER+EAERAG +K+A I+TPLMDFVRQKRA+K G+RRS SNG
Sbjct: 121  FLEFLAKPVENLPSAEIQLERKEAERAGVTKEAAIVTPLMDFVRQKRAAKSGTRRSASNG 180

Query: 1792 KLXXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQH 1613
            K                    G  KRR STTMY+LR+ AK+TSGKDKSTYILVP++DDQH
Sbjct: 181  KSNRRVSGASIGGPSSSSSKRGSEKRRMSTTMYILRDNAKATSGKDKSTYILVPKQDDQH 240

Query: 1612 PADKSSTPAAS-GAEALEVESGVPRTNDXXXXXXXXXXXXXXXIPHLTGG--VQSATFPV 1442
             +DKS T AA+ G   LE ESG     D               IPH++GG  VQ +T   
Sbjct: 241  LSDKSVTSAAACGNGELEEESGDSGPTDSGKKKILLLKGKEKEIPHMSGGSPVQQSTASP 300

Query: 1441 KSSLGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPRP 1262
              +  S++LKQN RREASGKIIRSIL  KD +                 +LE+DKRPPRP
Sbjct: 301  FKNPPSSALKQNQRREASGKIIRSILL-KD-NRQNQPSSVRSDQQNQTVNLERDKRPPRP 358

Query: 1261 PNVQLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXXX 1082
            P+VQL  KD N A +DK V ND+H   SEKQEKRTRNKDRPDR VWTPLRR         
Sbjct: 359  PSVQLLQKDANVASDDK-VPNDIHNIHSEKQEKRTRNKDRPDRVVWTPLRR---SDGSHT 414

Query: 1081 XXXXXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVK--TLGRISHSSLDNGSYKHGGRR 908
                           +TEG+  E ++DMS+AR GE +    GR S SS DNGSY+HGGRR
Sbjct: 415  SDESLSSSASQSAVDATEGTQLEMKSDMSSARGGEFRHGGSGRGSQSSTDNGSYRHGGRR 474

Query: 907  GPSHNVKDGDVSSVMNEGKPSKR-GSSSYGSHEKQVWVQKSSSGS 776
            G +H VKD D SS++ +GKP +R GSS +GSHEKQVWVQKSSSGS
Sbjct: 475  GSAH-VKDSDGSSLV-DGKPLRRGGSSGFGSHEKQVWVQKSSSGS 517


>ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Populus trichocarpa]
            gi|550341819|gb|ERP62848.1| hypothetical protein
            POPTR_0004s23450g [Populus trichocarpa]
          Length = 520

 Score =  577 bits (1487), Expect = e-161
 Identities = 317/520 (60%), Positives = 361/520 (69%), Gaps = 6/520 (1%)
 Frame = -3

Query: 2326 GSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYIDFKR 2147
            G  D+TKVV+RHLPP ISQ M  EQID  F+ RYNWLS+RPG NSQK QSYSRAYIDFKR
Sbjct: 5    GQSDKTKVVVRHLPPGISQPMFVEQIDVAFSGRYNWLSYRPGNNSQKHQSYSRAYIDFKR 64

Query: 2146 PEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYLEFL 1967
            PEDV++FAEFF+GH+FVNEKGTQFK IVEY+PSQRVPKQWSKKDGREGTI KDPEYLEFL
Sbjct: 65   PEDVIDFAEFFNGHIFVNEKGTQFKAIVEYSPSQRVPKQWSKKDGREGTISKDPEYLEFL 124

Query: 1966 EFIAKPVENLPSAEIQLERREAERAGTSKDAPIITPLMDFVRQKRASKVGSRRSLSNGKL 1787
            E IAKPVENLPSAEIQLERREAERAG +KDAPI+TPLMDFVRQKR +K G RR LSNGKL
Sbjct: 125  ELIAKPVENLPSAEIQLERREAERAGAAKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKL 184

Query: 1786 XXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQHPA 1607
                                  K+R STTMYVLR+TAKSTSGKDKSTY+ VP+RDDQ  +
Sbjct: 185  SRRAGGSGSPSSSSLKRGSE--KKRISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQLS 242

Query: 1606 DKSSTPAASGAEALEVESGVPRTNDXXXXXXXXXXXXXXXIPHLTGGV---QSATFPVKS 1436
            +  +  + SG   LE ES V    D               I  +TG +   QS +   ++
Sbjct: 243  NAVTLGSGSGTAVLEDESVVSGITDSGKKKILLLKGKEKEISLVTGTMSQQQSISSSDRN 302

Query: 1435 SLGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPRPPN 1256
             + ST+LK   RRE SG++IRSIL NKD  H                +LEK+KRPPRPP+
Sbjct: 303  IISSTALKSQ-RRETSGRMIRSILLNKDSRH-IRSSGVHSEPQMQTSNLEKEKRPPRPPH 360

Query: 1255 VQLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXXXXX 1076
             QL LKD NG P+DK VGNDLHGF +EKQEKRTRNKDRPDRGVWTPLRR           
Sbjct: 361  AQLGLKDANGTPDDKVVGNDLHGFPNEKQEKRTRNKDRPDRGVWTPLRRSDGSYASDESL 420

Query: 1075 XXXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVKTL--GRISHSSLDNGSYKHGGRRGP 902
                         S++G+HG+ + D  N RSGEVK L  GR +HSSLDNGS+KH GRRGP
Sbjct: 421  LSSASQSTQSVFDSSQGNHGDVKVDSLNLRSGEVKVLGSGRGNHSSLDNGSHKHFGRRGP 480

Query: 901  SHNVKDGDVSSVMNEGKPSKR-GSSSYGSHEKQVWVQKSS 785
            SH V+D D S+V  E K  KR GSS YGSHEKQVWVQKS+
Sbjct: 481  SHIVRDADGSTV--EAKTPKRGGSSGYGSHEKQVWVQKST 518


>ref|XP_012066696.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Jatropha curcas]
          Length = 509

 Score =  575 bits (1483), Expect = e-161
 Identities = 326/522 (62%), Positives = 367/522 (70%), Gaps = 3/522 (0%)
 Frame = -3

Query: 2332 MKGSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYIDF 2153
            MKG  ++TKVV+RHLPP ISQ M  EQI+  FA RYNW+SFRPGKNSQ+ QS SRAYIDF
Sbjct: 1    MKGQSEKTKVVVRHLPPTISQDMFLEQINVAFAGRYNWVSFRPGKNSQRHQSNSRAYIDF 60

Query: 2152 KRPEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYLE 1973
            + PEDV+EFAEFF+GH+FVNEKGTQF+ +VEYAPSQRVPKQWSKKDGREGTI KDP YLE
Sbjct: 61   RSPEDVIEFAEFFNGHLFVNEKGTQFRAVVEYAPSQRVPKQWSKKDGREGTILKDPAYLE 120

Query: 1972 FLEFIAKPVENLPSAEIQLERREAERAGTSKDAPIITPLMDFVRQKRASKVGSRRSLSNG 1793
            FLE I+KP ENLPSAEIQLERREAERAG  KDAPIITPLMDFVRQKRA+K GSRR L NG
Sbjct: 121  FLELISKPAENLPSAEIQLERREAERAGIIKDAPIITPLMDFVRQKRAAKTGSRRILGNG 180

Query: 1792 KLXXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQH 1613
            KL                      K+R STTMYVLR+TAKSTSGKDKSTYILVP+RDDQ 
Sbjct: 181  KLSRRAGTSGSPGSSSSKRSSE--KKRVSTTMYVLRDTAKSTSGKDKSTYILVPKRDDQQ 238

Query: 1612 PADKSST-PAASGAEALEVESGVPRTNDXXXXXXXXXXXXXXXIPHLTGGVQSATFPVKS 1436
             +DK+ T   ASGAE LE ESG     D               I        +A+F    
Sbjct: 239  LSDKAVTLGTASGAEVLEDESGASGITDAGKKKILLLKGKEKEISD-----NAASF--DK 291

Query: 1435 SLGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPRPPN 1256
            ++ S+++KQN RREASG+IIRSIL NK+                   S EK+KRPPRPP+
Sbjct: 292  NVISSAVKQNQRREASGRIIRSILLNKESRQNQSSGIQSEHQMQTSNS-EKEKRPPRPPH 350

Query: 1255 VQLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXXXXX 1076
            VQL L +TNGA +DK V NDLHGFS EKQEKRTRNKDRPDR VWTPLRR           
Sbjct: 351  VQLVL-NTNGALDDKVVINDLHGFSGEKQEKRTRNKDRPDRVVWTPLRRSDGSYASDESL 409

Query: 1075 XXXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVKTL-GRISHSSLDNGSYKHGGRRGPS 899
                         S++G+ G+ + D SN+RSGEVKTL GR SHSSLDNGS+KH GRRGPS
Sbjct: 410  SLSASQSTQSGVDSSQGNLGDLKVDPSNSRSGEVKTLTGRGSHSSLDNGSHKHFGRRGPS 469

Query: 898  HNVKDGDVSSVMNEGKPSKR-GSSSYGSHEKQVWVQKSSSGS 776
            H V+D D SS   EGK SKR G+S YGSHEKQVWVQKSSSGS
Sbjct: 470  HPVRDADGSS--GEGKASKRGGASGYGSHEKQVWVQKSSSGS 509


>ref|XP_011028362.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Populus euphratica]
          Length = 521

 Score =  575 bits (1483), Expect = e-161
 Identities = 316/523 (60%), Positives = 361/523 (69%), Gaps = 6/523 (1%)
 Frame = -3

Query: 2326 GSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYIDFKR 2147
            G  D+TKVV+RHLPP IS+ M  EQID  F+ RYNWLS+RPG NSQK QSYSRAYIDFKR
Sbjct: 5    GQSDKTKVVVRHLPPGISKPMFVEQIDVAFSGRYNWLSYRPGNNSQKHQSYSRAYIDFKR 64

Query: 2146 PEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYLEFL 1967
            PEDV++FAEFF+GH+FVNEKGTQFK IVEY+PSQRVPKQWSKKDGREGTI KDPEYLEF 
Sbjct: 65   PEDVIDFAEFFNGHLFVNEKGTQFKAIVEYSPSQRVPKQWSKKDGREGTILKDPEYLEFH 124

Query: 1966 EFIAKPVENLPSAEIQLERREAERAGTSKDAPIITPLMDFVRQKRASKVGSRRSLSNGKL 1787
            E I KPVENLPSAEIQLERREAERAG +KDAPI+TPLMDFVRQKR +K G RR LSNGKL
Sbjct: 125  ELIEKPVENLPSAEIQLERREAERAGAAKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKL 184

Query: 1786 XXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQHPA 1607
                                  K+R STTMYVLR+TAKSTSGKDKSTY+ VP+RD Q  +
Sbjct: 185  SRRAGGSGSPSSSSLKRGSE--KKRISTTMYVLRDTAKSTSGKDKSTYVQVPKRDGQQLS 242

Query: 1606 DKSSTPAASGAEALEVESGVPRTNDXXXXXXXXXXXXXXXIPHLTGGV---QSATFPVKS 1436
            +  +  + SG   LE ESGV    D               I  +TG +   QS +   ++
Sbjct: 243  NAVTLGSGSGTAVLEDESGVSGITDSGKKKILLLKGKEKEISLVTGTMAQQQSISSSDRN 302

Query: 1435 SLGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPRPPN 1256
             + ST LK   RRE SG++IRSIL NKD  H                +LEKDKRPPRPP+
Sbjct: 303  IISSTVLKSQ-RRETSGRMIRSILLNKDSRH-IRSSGVHSEPQMQTSNLEKDKRPPRPPH 360

Query: 1255 VQLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXXXXX 1076
             QL LKD NG P+DK VGNDLHGF +EKQEKRTRNKDRPDRGVWTPLRR           
Sbjct: 361  AQLGLKDANGTPDDKVVGNDLHGFPNEKQEKRTRNKDRPDRGVWTPLRRSDGSYASDESL 420

Query: 1075 XXXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVKTL--GRISHSSLDNGSYKHGGRRGP 902
                         S++G+HG+ + D  N RSGEVK L  GR +HSSLDNGS+KH GRRGP
Sbjct: 421  SSSASQSTQSVFDSSQGNHGDVKVDNLNLRSGEVKVLGSGRSNHSSLDNGSHKHFGRRGP 480

Query: 901  SHNVKDGDVSSVMNEGKPSKR-GSSSYGSHEKQVWVQKSSSGS 776
            SH V+D + S+V  E K  KR G+S YGSHEKQVWVQKS+SGS
Sbjct: 481  SHIVRDAEGSAV--EAKTPKRGGASGYGSHEKQVWVQKSTSGS 521


>ref|XP_012066695.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Jatropha curcas] gi|643736043|gb|KDP42459.1|
            hypothetical protein JCGZ_00256 [Jatropha curcas]
          Length = 510

 Score =  575 bits (1483), Expect = e-161
 Identities = 325/522 (62%), Positives = 366/522 (70%), Gaps = 3/522 (0%)
 Frame = -3

Query: 2332 MKGSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYIDF 2153
            MKG  ++TKVV+RHLPP ISQ M  EQI+  FA RYNW+SFRPGKNSQ+ QS SRAYIDF
Sbjct: 1    MKGQSEKTKVVVRHLPPTISQDMFLEQINVAFAGRYNWVSFRPGKNSQRHQSNSRAYIDF 60

Query: 2152 KRPEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYLE 1973
            + PEDV+EFAEFF+GH+FVNEKGTQF+ +VEYAPSQRVPKQWSKKDGREGTI KDP YLE
Sbjct: 61   RSPEDVIEFAEFFNGHLFVNEKGTQFRAVVEYAPSQRVPKQWSKKDGREGTILKDPAYLE 120

Query: 1972 FLEFIAKPVENLPSAEIQLERREAERAGTSKDAPIITPLMDFVRQKRASKVGSRRSLSNG 1793
            FLE I+KP ENLPSAEIQLERREAERAG  KDAPIITPLMDFVRQKRA+K GSRR L NG
Sbjct: 121  FLELISKPAENLPSAEIQLERREAERAGIIKDAPIITPLMDFVRQKRAAKTGSRRILGNG 180

Query: 1792 KLXXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQH 1613
            KL                      K+R STTMYVLR+TAKSTSGKDKSTYILVP+RDDQ 
Sbjct: 181  KLSRRAGTSGSPGSSSSKRSSE--KKRVSTTMYVLRDTAKSTSGKDKSTYILVPKRDDQQ 238

Query: 1612 PADKSST-PAASGAEALEVESGVPRTNDXXXXXXXXXXXXXXXIPHLTGGVQSATFPVKS 1436
             +DK+ T   ASGAE LE ESG     D                        +A+F    
Sbjct: 239  LSDKAVTLGTASGAEVLEDESGASGITDAGKKKILLLKGKEKE----ISDQNAASF--DK 292

Query: 1435 SLGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPRPPN 1256
            ++ S+++KQN RREASG+IIRSIL NK+                   S EK+KRPPRPP+
Sbjct: 293  NVISSAVKQNQRREASGRIIRSILLNKESRQNQSSGIQSEHQMQTSNS-EKEKRPPRPPH 351

Query: 1255 VQLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXXXXX 1076
            VQL L +TNGA +DK V NDLHGFS EKQEKRTRNKDRPDR VWTPLRR           
Sbjct: 352  VQLVL-NTNGALDDKVVINDLHGFSGEKQEKRTRNKDRPDRVVWTPLRRSDGSYASDESL 410

Query: 1075 XXXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVKTL-GRISHSSLDNGSYKHGGRRGPS 899
                         S++G+ G+ + D SN+RSGEVKTL GR SHSSLDNGS+KH GRRGPS
Sbjct: 411  SLSASQSTQSGVDSSQGNLGDLKVDPSNSRSGEVKTLTGRGSHSSLDNGSHKHFGRRGPS 470

Query: 898  HNVKDGDVSSVMNEGKPSKR-GSSSYGSHEKQVWVQKSSSGS 776
            H V+D D SS   EGK SKR G+S YGSHEKQVWVQKSSSGS
Sbjct: 471  HPVRDADGSS--GEGKASKRGGASGYGSHEKQVWVQKSSSGS 510


>ref|XP_006385052.1| Smg-4/UPF3 family protein [Populus trichocarpa]
            gi|550341820|gb|ERP62849.1| Smg-4/UPF3 family protein
            [Populus trichocarpa]
          Length = 527

 Score =  570 bits (1469), Expect = e-159
 Identities = 317/527 (60%), Positives = 361/527 (68%), Gaps = 13/527 (2%)
 Frame = -3

Query: 2326 GSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYIDFKR 2147
            G  D+TKVV+RHLPP ISQ M  EQID  F+ RYNWLS+RPG NSQK QSYSRAYIDFKR
Sbjct: 5    GQSDKTKVVVRHLPPGISQPMFVEQIDVAFSGRYNWLSYRPGNNSQKHQSYSRAYIDFKR 64

Query: 2146 PEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYLEFL 1967
            PEDV++FAEFF+GH+FVNEKGTQFK IVEY+PSQRVPKQWSKKDGREGTI KDPEYLEFL
Sbjct: 65   PEDVIDFAEFFNGHIFVNEKGTQFKAIVEYSPSQRVPKQWSKKDGREGTISKDPEYLEFL 124

Query: 1966 EFIAKPVENLPSAEIQLERREAERAGTSKDAPIITPLMDFVRQKRASKVGSRRSLSNGKL 1787
            E IAKPVENLPSAEIQLERREAERAG +KDAPI+TPLMDFVRQKR +K G RR LSNGKL
Sbjct: 125  ELIAKPVENLPSAEIQLERREAERAGAAKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKL 184

Query: 1786 XXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQHPA 1607
                                  K+R STTMYVLR+TAKSTSGKDKSTY+ VP+RDDQ  +
Sbjct: 185  SRRAGGSGSPSSSSLKRGSE--KKRISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQLS 242

Query: 1606 DKSSTPAASGAEALEVESGVPRTNDXXXXXXXXXXXXXXXIPHLTGGV---QSATFPVKS 1436
            +  +  + SG   LE ES V    D               I  +TG +   QS +   ++
Sbjct: 243  NAVTLGSGSGTAVLEDESVVSGITDSGKKKILLLKGKEKEISLVTGTMSQQQSISSSDRN 302

Query: 1435 SLGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPRPPN 1256
             + ST+LK   RRE SG++IRSIL NKD  H                +LEK+KRPPRPP+
Sbjct: 303  IISSTALKSQ-RRETSGRMIRSILLNKDSRH-IRSSGVHSEPQMQTSNLEKEKRPPRPPH 360

Query: 1255 VQLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXXXXX 1076
             QL LKD NG P+DK VGNDLHGF +EKQEKRTRNKDRPDRGVWTPLRR           
Sbjct: 361  AQLGLKDANGTPDDKVVGNDLHGFPNEKQEKRTRNKDRPDRGVWTPLRRSDGSYASDESL 420

Query: 1075 XXXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVKTL--GRISHSSLDNGSYKHGGRRGP 902
                         S++G+HG+ + D  N RSGEVK L  GR +HSSLDNGS+KH GRRGP
Sbjct: 421  LSSASQSTQSVFDSSQGNHGDVKVDSLNLRSGEVKVLGSGRGNHSSLDNGSHKHFGRRGP 480

Query: 901  SHNVKDGDVSSVMNEGKPSKR-GSSSYGSHE-------KQVWVQKSS 785
            SH V+D D S+V  E K  KR GSS YGSHE       KQVWVQKS+
Sbjct: 481  SHIVRDADGSTV--EAKTPKRGGSSGYGSHEVCSLDSQKQVWVQKST 525


>ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
            gi|557533707|gb|ESR44825.1| hypothetical protein
            CICLE_v10000901mg [Citrus clementina]
          Length = 514

 Score =  568 bits (1465), Expect = e-159
 Identities = 319/525 (60%), Positives = 372/525 (70%), Gaps = 6/525 (1%)
 Frame = -3

Query: 2332 MKGSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYIDF 2153
            MKG LDRTKVV+R+LPPAI+Q   TEQIDG F  RYNW+SFR GK SQK QS +RAY+DF
Sbjct: 1    MKGPLDRTKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLDF 60

Query: 2152 KRPEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYLE 1973
            K+PEDV+EFAEFF+GHVFVNEKG QFKTIVEYAPSQRVPKQWSKKDGREGT+ KDPEYLE
Sbjct: 61   KKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYLE 120

Query: 1972 FLEFIAKPVENLPSAEIQLERREAERAGTSKDAPIITPLMDFVRQKRASKVGSRRSLSNG 1793
            FLEFI+KPVENLPSAEIQLERREAERAG +K+A I+TPLMDFVRQKRA+K G RR LSNG
Sbjct: 121  FLEFISKPVENLPSAEIQLERREAERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSNG 180

Query: 1792 KLXXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQH 1613
            KL                   G  K++ STTMYVLR+TAK++SGKDKSTYILVP+RDDQ 
Sbjct: 181  KLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQD 240

Query: 1612 PADKSSTPAASGAEALEVESGVPRTNDXXXXXXXXXXXXXXXIPHLTGGV---QSATFPV 1442
                 S+ +A+G+E +  ESGVP  +D               I  ++G V   QSA+  V
Sbjct: 241  FDKPVSSSSATGSEVVLEESGVPANSDGGKKKVLLLKGKEREISQVSGSVSHQQSAS--V 298

Query: 1441 KSSLGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPRP 1262
            K+ + S +LKQN RRE SG+IIR IL NKD                   +LEKDKRPPRP
Sbjct: 299  KTIISSPALKQNQRRENSGRIIRGILLNKDARQ---NQASGLHSEQQISNLEKDKRPPRP 355

Query: 1261 PNVQLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXXX 1082
             +VQL +KDTNG  +DK + NDLH   SEKQE+RTRNKDRPDR  WT LRR         
Sbjct: 356  SHVQLVMKDTNGVSDDKVIVNDLH---SEKQERRTRNKDRPDRAAWT-LRRSDGSYQSDE 411

Query: 1081 XXXXXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVKTL--GRISHSSLDNGSYKHGGRR 908
                           S+EG+ G+ + D+SN RSGEVK +  GR SHSS+DNGS++H GRR
Sbjct: 412  SLSSSASQLSLSAVDSSEGNLGDGKFDLSNMRSGEVKAVGGGRSSHSSVDNGSHRHIGRR 471

Query: 907  GPSHNVKDGDVSSVMNEGKPSKR-GSSSYGSHEKQVWVQKSSSGS 776
            GP+H VKD D S VM+EGKP +R G+S YGSHEKQVWVQKSSSGS
Sbjct: 472  GPTH-VKD-DGSPVMSEGKPLRRGGASGYGSHEKQVWVQKSSSGS 514


>ref|XP_011028363.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Populus euphratica]
          Length = 520

 Score =  567 bits (1462), Expect = e-158
 Identities = 311/522 (59%), Positives = 357/522 (68%), Gaps = 5/522 (0%)
 Frame = -3

Query: 2326 GSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYIDFKR 2147
            G  D+TKVV+RHLPP IS+ M  EQID  F+ RYNWLS+RPG NSQK QSYSRAYIDFKR
Sbjct: 5    GQSDKTKVVVRHLPPGISKPMFVEQIDVAFSGRYNWLSYRPGNNSQKHQSYSRAYIDFKR 64

Query: 2146 PEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYLEFL 1967
            PEDV++FAEFF+GH+FVNEKGTQFK IVEY+PSQRVPKQWSKKDGREGTI KDPEYLEF 
Sbjct: 65   PEDVIDFAEFFNGHLFVNEKGTQFKAIVEYSPSQRVPKQWSKKDGREGTILKDPEYLEFH 124

Query: 1966 EFIAKPVENLPSAEIQLERREAERAGTSKDAPIITPLMDFVRQKRASKVGSRRSLSNGKL 1787
            E I KPVENLPSAEIQLERREAERAG +KDAPI+TPLMDFVRQKR +K G RR LSNGKL
Sbjct: 125  ELIEKPVENLPSAEIQLERREAERAGAAKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKL 184

Query: 1786 XXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQHPA 1607
                                  K+R STTMYVLR+TAKSTSGKDKSTY+ VP+RD Q  +
Sbjct: 185  SRRAGGSGSPSSSSLKRGSE--KKRISTTMYVLRDTAKSTSGKDKSTYVQVPKRDGQQLS 242

Query: 1606 DKSSTPAASGAEALEVE--SGVPRTNDXXXXXXXXXXXXXXXIPHLTGGVQSATFPVKSS 1433
            +  +  + SG   LE E  SG+  +                 +       QS +   ++ 
Sbjct: 243  NAVTLGSGSGTAVLEDERVSGITDSGKKKILLLKGKEKEISLVTGTMAQQQSISSSDRNI 302

Query: 1432 LGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPRPPNV 1253
            + ST LK   RRE SG++IRSIL NKD  H                +LEKDKRPPRPP+ 
Sbjct: 303  ISSTVLKSQ-RRETSGRMIRSILLNKDSRH-IRSSGVHSEPQMQTSNLEKDKRPPRPPHA 360

Query: 1252 QLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXXXXXX 1073
            QL LKD NG P+DK VGNDLHGF +EKQEKRTRNKDRPDRGVWTPLRR            
Sbjct: 361  QLGLKDANGTPDDKVVGNDLHGFPNEKQEKRTRNKDRPDRGVWTPLRRSDGSYASDESLS 420

Query: 1072 XXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVKTL--GRISHSSLDNGSYKHGGRRGPS 899
                        S++G+HG+ + D  N RSGEVK L  GR +HSSLDNGS+KH GRRGPS
Sbjct: 421  SSASQSTQSVFDSSQGNHGDVKVDNLNLRSGEVKVLGSGRSNHSSLDNGSHKHFGRRGPS 480

Query: 898  HNVKDGDVSSVMNEGKPSKR-GSSSYGSHEKQVWVQKSSSGS 776
            H V+D + S+V  E K  KR G+S YGSHEKQVWVQKS+SGS
Sbjct: 481  HIVRDAEGSAV--EAKTPKRGGASGYGSHEKQVWVQKSTSGS 520


>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
            sinensis]
          Length = 514

 Score =  567 bits (1461), Expect = e-158
 Identities = 318/525 (60%), Positives = 371/525 (70%), Gaps = 6/525 (1%)
 Frame = -3

Query: 2332 MKGSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYIDF 2153
            MKG LDRTKVV+R+LPPAI+Q   TEQIDG F  RYNW+SFR GK SQK QS +RAY+DF
Sbjct: 1    MKGPLDRTKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLDF 60

Query: 2152 KRPEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYLE 1973
            K+PEDV+EFAEFF+GHVFVNEKG QFKTIVEYAPSQRVPKQWSKKDGREGT+ KDPEYLE
Sbjct: 61   KKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYLE 120

Query: 1972 FLEFIAKPVENLPSAEIQLERREAERAGTSKDAPIITPLMDFVRQKRASKVGSRRSLSNG 1793
            FLEFI+KPVENLPSAEIQLERREAERAG +K+A I+TPLMDFVRQKRA+K G RR LSNG
Sbjct: 121  FLEFISKPVENLPSAEIQLERREAERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSNG 180

Query: 1792 KLXXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQH 1613
            KL                   G  K++ STTMYVLR+TAK++SGKDKSTYILVP+RDDQ 
Sbjct: 181  KLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQD 240

Query: 1612 PADKSSTPAASGAEALEVESGVPRTNDXXXXXXXXXXXXXXXIPHLTGGV---QSATFPV 1442
                 S+ +A+G+E +  ESGVP  +D               I  ++G V   QSA+  V
Sbjct: 241  FDKPVSSSSATGSEVVLEESGVPANSDGGKKKVLLLKGKEREISQVSGSVSHQQSAS--V 298

Query: 1441 KSSLGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPRP 1262
            K+ + S +LKQN RRE SG+IIR IL NKD                   +LEKDKRPPRP
Sbjct: 299  KNIISSPALKQNQRRENSGRIIRGILLNKDARQ---NQASGLHSEQQISNLEKDKRPPRP 355

Query: 1261 PNVQLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXXX 1082
             +V L +KDTNG  +DK + NDLH   SEKQE+RTRNKDRPDR  WT LRR         
Sbjct: 356  SHVHLVMKDTNGVSDDKVIVNDLH---SEKQERRTRNKDRPDRAAWT-LRRSDGSYQSDE 411

Query: 1081 XXXXXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVKTL--GRISHSSLDNGSYKHGGRR 908
                           S+EG+ G+ + D+SN RSGEVK +  GR SHSS+DNGS++H GRR
Sbjct: 412  SLSSSASQLSLSAVDSSEGNLGDGKFDLSNMRSGEVKAVGGGRSSHSSVDNGSHRHIGRR 471

Query: 907  GPSHNVKDGDVSSVMNEGKPSKR-GSSSYGSHEKQVWVQKSSSGS 776
            GP+H VKD D S VM+EGKP +R G+S YGSHEKQVWVQKSSSGS
Sbjct: 472  GPTH-VKD-DSSPVMSEGKPLRRGGASGYGSHEKQVWVQKSSSGS 514


>ref|XP_007041200.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
            gi|508705135|gb|EOX97031.1| Smg-4/UPF3 family protein,
            putative isoform 1 [Theobroma cacao]
          Length = 514

 Score =  547 bits (1409), Expect = e-152
 Identities = 315/525 (60%), Positives = 361/525 (68%), Gaps = 6/525 (1%)
 Frame = -3

Query: 2332 MKGSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYIDF 2153
            MKG+LDRTKV+LRHLPPAI+++ML EQ+D  F+ RYNWLSFRPGK+SQK QSYSRAYIDF
Sbjct: 1    MKGALDRTKVILRHLPPAITEAMLVEQVDTAFSGRYNWLSFRPGKSSQKHQSYSRAYIDF 60

Query: 2152 KRPEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYLE 1973
            KR EDV+EFAEFF+GHVFVNEKGTQFKTIVEYAPSQRVPK+ SKKDGREGTI KD EYLE
Sbjct: 61   KRSEDVLEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKRSSKKDGREGTILKDLEYLE 120

Query: 1972 FLEFIAKPVENLPSAEIQLERREAERAGTSKDAPIITPLMDFVRQKRASKVGSRRSLSNG 1793
            FLE + KPVENLPSAEIQLER+EAERAG  KD PI+TPLMDFVRQKRA+K GSRRSLSNG
Sbjct: 121  FLECLGKPVENLPSAEIQLERKEAERAGVPKDTPIVTPLMDFVRQKRAAKGGSRRSLSNG 180

Query: 1792 KLXXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQH 1613
            KL                   G  KRR STTMYVLR++ K+ SGKDKSTYILV +RD+Q 
Sbjct: 181  KLSRRAGGSSGGTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILVSKRDEQQ 240

Query: 1612 PADKSSTPAAS-GAEALEVESGVPRTNDXXXXXXXXXXXXXXXIPHLTGGV---QSATFP 1445
             +DK    A+S G E  E ESGVP   D               I  + G V   Q+ T P
Sbjct: 241  LSDKHVALASSMGTEISEEESGVPGITDAVKKKVLLLKGKEKEISPVAGNVLHQQNVTSP 300

Query: 1444 VKSSLGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPR 1265
            +K+ LGST  KQN RRE  G++IR IL NKD                   +LEKD+RPPR
Sbjct: 301  IKTILGSTPTKQNSRRE--GRMIRGILLNKDARQ-NQSSGVQSEQQIRTSNLEKDRRPPR 357

Query: 1264 PPNVQLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXX 1085
              +  L LKDTN A +DK VGNDLHG  SEK E+R RNKDRPDRGVWT LRR        
Sbjct: 358  HSHSHLVLKDTNTASDDKVVGNDLHG--SEKPERRCRNKDRPDRGVWT-LRRSDGSYASD 414

Query: 1084 XXXXXXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVKTLGRISHSSLDNGSY-KHGGRR 908
                              EG++G+ + D+SN RS +VKT+G   +SSLDNGS+ KH  RR
Sbjct: 415  ESMSSSASQSALIPLDPLEGTYGDTKVDLSNVRSVQVKTVGSGRNSSLDNGSHNKHVSRR 474

Query: 907  GPSHNVKDGDVSSVMNEGKPSKRG-SSSYGSHEKQVWVQKSSSGS 776
            G    V DG  SSVM++GKP KRG ++ YGSHEKQVWVQKSSSGS
Sbjct: 475  GA---VADG--SSVMSDGKPGKRGCAAGYGSHEKQVWVQKSSSGS 514


>ref|XP_008218705.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Prunus mume]
          Length = 492

 Score =  546 bits (1408), Expect = e-152
 Identities = 306/522 (58%), Positives = 351/522 (67%), Gaps = 2/522 (0%)
 Frame = -3

Query: 2335 LMKGSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYID 2156
            ++K  LDRTKVVLRHLPP+ISQ+ L EQID  F+ RYNW++FRPGK SQK  SYSRAYID
Sbjct: 1    MLKDQLDRTKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVAFRPGKRSQKNPSYSRAYID 60

Query: 2155 FKRPEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYL 1976
             KRPEDV+EFAEFFDGH+FVNEKG+QFK IVEYAPSQRVPKQWSKKDGREGTIF+DPEYL
Sbjct: 61   LKRPEDVIEFAEFFDGHLFVNEKGSQFKVIVEYAPSQRVPKQWSKKDGREGTIFRDPEYL 120

Query: 1975 EFLEFIAKPVENLPSAEIQLERREAERAGTSKDAPIITPLMDFVRQKRASKVGSRRSLSN 1796
            EFLEF+AKP ENLPSAEIQLERREAER+G  KDAPI+TPLMDFVRQKRASK GSRRSL+N
Sbjct: 121  EFLEFLAKPAENLPSAEIQLERREAERSGAGKDAPIVTPLMDFVRQKRASKAGSRRSLTN 180

Query: 1795 GKLXXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQ 1616
            GK                    G  ++R S TMYVLR+T K+TS KDKSTYILVP+RDDQ
Sbjct: 181  GKTSRRAGGPSSRSPSLATSKRGSERKRNSATMYVLRDTRKNTSAKDKSTYILVPKRDDQ 240

Query: 1615 HPADKSSTPA-ASGAEALEVESGVPRTNDXXXXXXXXXXXXXXXIPHLTGGV-QSATFPV 1442
             P++KS T A A+G   LE ESGV   +                I H+   + Q  +   
Sbjct: 241  QPSEKSVTLASAAGTHVLEEESGVSGAD-------------AREISHVPANMSQQQSSSA 287

Query: 1441 KSSLGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPRP 1262
            K+  G+ +LKQNLRR+ +G+IIR IL NKD                   S ++DKRPPR 
Sbjct: 288  KNMGGTIALKQNLRRQENGRIIRGILLNKDARQSQSSGIYSAQQIQTSNS-DRDKRPPRS 346

Query: 1261 PNVQLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXXX 1082
             +VQL LKDTNGAP+   VGNDLHG  SEKQEKR RNK+RPDR VWTPL R         
Sbjct: 347  QHVQLILKDTNGAPDYNIVGNDLHGICSEKQEKRIRNKERPDRVVWTPLNR-LDGSSASD 405

Query: 1081 XXXXXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVKTLGRISHSSLDNGSYKHGGRRGP 902
                           S+EGS G+ R D SN+  GE            + GS+KH GRRG 
Sbjct: 406  ESLSSAFQPAHSLLDSSEGSRGDMRFDTSNSLIGE------------NQGSHKHHGRRGT 453

Query: 901  SHNVKDGDVSSVMNEGKPSKRGSSSYGSHEKQVWVQKSSSGS 776
            +H V+D D S V  EGK SKRG   YGSHEKQVWVQKSSSGS
Sbjct: 454  THGVRDLDGSPVAGEGKHSKRG---YGSHEKQVWVQKSSSGS 492


>ref|XP_002526435.1| conserved hypothetical protein [Ricinus communis]
            gi|223534215|gb|EEF35930.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 472

 Score =  541 bits (1395), Expect = e-151
 Identities = 308/526 (58%), Positives = 359/526 (68%), Gaps = 9/526 (1%)
 Frame = -3

Query: 2326 GSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYIDFKR 2147
            G  ++TKVV+RHLPP ISQ    EQID  F+ RYNW+SFRPGK+SQK QSYSRAYIDFKR
Sbjct: 4    GQAEKTKVVVRHLPPTISQGSFLEQIDVVFSGRYNWVSFRPGKSSQKHQSYSRAYIDFKR 63

Query: 2146 PEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYLEFL 1967
            PEDV+EFAEFF+GH+FVNEKGTQF+ IVEYAPSQ VPKQWSKKDGREGTI KDP YLEFL
Sbjct: 64   PEDVIEFAEFFNGHLFVNEKGTQFRAIVEYAPSQHVPKQWSKKDGREGTIVKDPAYLEFL 123

Query: 1966 EFIAKPVENLPSAEIQLERREAERAGT-SKDAPIITPLMDFVRQKRASKVGSRRSLSNGK 1790
            E I+KP ENLPSAEIQLERREAERA + +KDAPI+TPLMDFVRQKRA+K GSR       
Sbjct: 124  ELISKPAENLPSAEIQLERREAERAASAAKDAPIVTPLMDFVRQKRAAKTGSR------- 176

Query: 1789 LXXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQHP 1610
                                           YVLR++AKSTSGKDKSTY+LVP+RDDQ  
Sbjct: 177  -------------------------------YVLRDSAKSTSGKDKSTYLLVPKRDDQQF 205

Query: 1609 ADKSST-PAASGAEALEVESGVPRTNDXXXXXXXXXXXXXXXIPHLTGGV---QSATFPV 1442
            +DKS+   +ASG E LE ES +                    I  L+GG+    +A+F  
Sbjct: 206  SDKSTPFASASGTEVLEDESEL--------------YHLCLLIVQLSGGMSKQNAASF-- 249

Query: 1441 KSSLGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPRP 1262
              ++ S+++KQ+ RRE+SG+IIRSIL NKD                   +LEK+KR PRP
Sbjct: 250  DKNVTSSAIKQSQRRESSGRIIRSILLNKDSRQ-NQSSGFQSEQQIQSSNLEKEKRLPRP 308

Query: 1261 PNVQLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXXX 1082
             +VQL LKD NG+ +DK VGNDLHGFS EKQEKRTRNKDRPDR VWTPLRR         
Sbjct: 309  AHVQLVLKDVNGSSDDKFVGNDLHGFSGEKQEKRTRNKDRPDRVVWTPLRRSDGSYASDE 368

Query: 1081 XXXXXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVKTL--GRISHSSLDNGSYKHGGRR 908
                           S++G+ G+ + D SN+RSG+VKTL  GR SHSSLDNGS+KH GRR
Sbjct: 369  SLSSSASQSTHTGQDSSQGNLGDIKVDSSNSRSGDVKTLGSGRSSHSSLDNGSHKHFGRR 428

Query: 907  GPSHNVKDGDVSSVMNEGKPSKR--GSSSYGSHEKQVWVQKSSSGS 776
            GPSH V+D D SS+  EGKPSKR  G+S YGSHEKQVWVQKSSSGS
Sbjct: 429  GPSHTVRDADGSSL--EGKPSKRGGGASGYGSHEKQVWVQKSSSGS 472


>ref|XP_009587503.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Nicotiana tomentosiformis]
          Length = 508

 Score =  540 bits (1392), Expect = e-150
 Identities = 307/526 (58%), Positives = 365/526 (69%), Gaps = 7/526 (1%)
 Frame = -3

Query: 2332 MKGSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYIDF 2153
            MKG LDRTKVVLRHLPP ISQSML EQ+  RF  RYNW SFRPGK+SQK Q+YSRAY+DF
Sbjct: 1    MKGPLDRTKVVLRHLPPTISQSMLVEQVLSRFTGRYNWFSFRPGKSSQKHQTYSRAYVDF 60

Query: 2152 KRPEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYLE 1973
            KRPEDV+EFAEFFDGHVFVNEKGTQFKTIVEYAPSQR PK+WSKKDGREGTI KDPEYLE
Sbjct: 61   KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRAPKRWSKKDGREGTILKDPEYLE 120

Query: 1972 FLEFIAKPVENLPSAEIQLERREAERAGTSKDAPIITPLMDFVRQKRASKVGSRRSLSNG 1793
            FLEFIAKP+ENLPSAEIQLER+EAERAG++KDAPI+TPLMD++RQKRA+K G+R+SLSNG
Sbjct: 121  FLEFIAKPIENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARKSLSNG 180

Query: 1792 KLXXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQH 1613
            +                    G  KRR STTMYVLR+++K+ SGKDK  +ILVP+RDDQ 
Sbjct: 181  RPTRRANGTSSGSPSSSAFKQGSEKRRVSTTMYVLRDSSKAGSGKDK-RHILVPKRDDQQ 239

Query: 1612 PADKSSTPA-ASGAEALEVESGVPRTNDXXXXXXXXXXXXXXXIPHLTGG--VQSATFP- 1445
             A+KS T A  SGA+A+E E+G     D               IP+++ G  +Q    P 
Sbjct: 240  QAEKSGTSAPGSGADAVEEETG--GAADVGKKKILLLKGKEREIPNVSSGSLIQDNAAPI 297

Query: 1444 VKSSLGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPR 1265
            VK+++ S++ +QN RREASGKIIRSIL  KD                     +KDK+PPR
Sbjct: 298  VKNTITSSAPQQNQRREASGKIIRSILL-KDARQNQAPSASQQEQHSQ----DKDKKPPR 352

Query: 1264 PPNVQLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXX 1085
            PP+VQLF K+ NG  EDK VG DLH   +EKQE+R+R +DRPDRGVWTPLRR        
Sbjct: 353  PPSVQLFQKEINGVNEDKIVGTDLHVVHTEKQERRSRIRDRPDRGVWTPLRR-ADSLHAS 411

Query: 1084 XXXXXXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVKTL--GRISHSSLDNGSYKHGGR 911
                            S EGS GE + D+ N R GE + +  GR SHSS DNG+YK   R
Sbjct: 412  DESLSSSTSQSSEVLDSLEGSQGETKNDLPNVRGGEFRPMGSGRNSHSSFDNGTYK---R 468

Query: 910  RGPSHNVKDGDVSSVMNEGKPSKRGS-SSYGSHEKQVWVQKSSSGS 776
            RG    ++D  +S  + EGKP +RG  S+YG+HEKQVWVQKSSSG+
Sbjct: 469  RG----MRDDGIS--VGEGKPLRRGGPSNYGTHEKQVWVQKSSSGT 508


>ref|XP_011047885.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Populus euphratica]
          Length = 517

 Score =  540 bits (1390), Expect = e-150
 Identities = 303/522 (58%), Positives = 353/522 (67%), Gaps = 5/522 (0%)
 Frame = -3

Query: 2326 GSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYIDFKR 2147
            G  D+TKVV+RHLPP +SQ M  EQID  F+ RYNWLSFRPGK+SQK QS SRAYIDFKR
Sbjct: 4    GQSDKTKVVVRHLPPGVSQPMFVEQIDLAFSGRYNWLSFRPGKSSQKHQSCSRAYIDFKR 63

Query: 2146 PEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYLEFL 1967
            P+DV++FAEFF+GH+FVNEKGTQFK IVEYAPSQ VPKQWSKKDGREGTI KDPEYLEFL
Sbjct: 64   PDDVIDFAEFFNGHLFVNEKGTQFKAIVEYAPSQHVPKQWSKKDGREGTILKDPEYLEFL 123

Query: 1966 EFIAKPVENLPSAEIQLERREAERAGTSKDAPIITPLMDFVRQKRASKVGSRRSLSNGKL 1787
            EFIAKPVENLPSAEIQLERREAERAG +KDAPI+TPLMDF+RQKRA+K G RR LSNGK 
Sbjct: 124  EFIAKPVENLPSAEIQLERREAERAGVAKDAPIVTPLMDFIRQKRAAKSGPRRILSNGK- 182

Query: 1786 XXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQHPA 1607
                               G  K+R STTMYVLR+TAK TSGK+KS Y  VP+ DD+  +
Sbjct: 183  -PSRRAGGSGSPSSSSSKRGSEKKRGSTTMYVLRDTAKGTSGKEKSIYAQVPKLDDRRLS 241

Query: 1606 DKSSTPAASGAEALEVE--SGVPRTNDXXXXXXXXXXXXXXXIPHLTGGVQSATFPVKSS 1433
               +  + SG E  E E  SG+  T                 +  +T   QS +   ++ 
Sbjct: 242  KAVTLGSGSGTEVSEEETVSGITDTGKKKILLLKGKEKEISLVTGITSQQQSISTSDRNI 301

Query: 1432 LGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPRPPNV 1253
            + ST+LK   R E+SG++I+SIL +KD                   +LEKDKRPPRPP+ 
Sbjct: 302  ISSTALKSQ-RHESSGRVIKSILLHKDSRR-IQSSGVQSEPQMQTSNLEKDKRPPRPPHT 359

Query: 1252 QLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXXXXXX 1073
             L LKD NG P+D+AV NDLHGF +EKQE+RTRNKDRPDR VWT LRR            
Sbjct: 360  -LVLKDANGTPDDQAVANDLHGFPNEKQERRTRNKDRPDRVVWT-LRRSEGSCASDESLS 417

Query: 1072 XXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVKTL--GRISHSSLDNGSYKHGGRRGPS 899
                        S++ +HG+ + D  N RSGEVK L  GR +HSSLDNGS KH GRRGP 
Sbjct: 418  SSASLSTQSGFDSSQVNHGDVKVDTLNLRSGEVKALGSGRSNHSSLDNGSQKHSGRRGPP 477

Query: 898  HNVKDGDVSSVMNEGKPSKR-GSSSYGSHEKQVWVQKSSSGS 776
            H V+D D S+V  EGK  KR G+S YGSHEKQVWVQKSSSGS
Sbjct: 478  HPVRDADGSTV--EGKTVKRGGASGYGSHEKQVWVQKSSSGS 517


>ref|XP_011047883.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Populus euphratica] gi|743908840|ref|XP_011047884.1|
            PREDICTED: regulator of nonsense transcripts UPF3-like
            isoform X1 [Populus euphratica]
          Length = 518

 Score =  539 bits (1389), Expect = e-150
 Identities = 303/523 (57%), Positives = 353/523 (67%), Gaps = 6/523 (1%)
 Frame = -3

Query: 2326 GSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYIDFKR 2147
            G  D+TKVV+RHLPP +SQ M  EQID  F+ RYNWLSFRPGK+SQK QS SRAYIDFKR
Sbjct: 4    GQSDKTKVVVRHLPPGVSQPMFVEQIDLAFSGRYNWLSFRPGKSSQKHQSCSRAYIDFKR 63

Query: 2146 PEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYLEFL 1967
            P+DV++FAEFF+GH+FVNEKGTQFK IVEYAPSQ VPKQWSKKDGREGTI KDPEYLEFL
Sbjct: 64   PDDVIDFAEFFNGHLFVNEKGTQFKAIVEYAPSQHVPKQWSKKDGREGTILKDPEYLEFL 123

Query: 1966 EFIAKPVENLPSAEIQLERREAERAGTSKDAPIITPLMDFVRQKRASKVGSRRSLSNGKL 1787
            EFIAKPVENLPSAEIQLERREAERAG +KDAPI+TPLMDF+RQKRA+K G RR LSNGK 
Sbjct: 124  EFIAKPVENLPSAEIQLERREAERAGVAKDAPIVTPLMDFIRQKRAAKSGPRRILSNGK- 182

Query: 1786 XXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQHPA 1607
                               G  K+R STTMYVLR+TAK TSGK+KS Y  VP+ DD+  +
Sbjct: 183  -PSRRAGGSGSPSSSSSKRGSEKKRGSTTMYVLRDTAKGTSGKEKSIYAQVPKLDDRRLS 241

Query: 1606 DKSSTPAASGAEALEVE---SGVPRTNDXXXXXXXXXXXXXXXIPHLTGGVQSATFPVKS 1436
               +  + SG E  E E   SG+  T                 +  +T   QS +   ++
Sbjct: 242  KAVTLGSGSGTEVSEEETAVSGITDTGKKKILLLKGKEKEISLVTGITSQQQSISTSDRN 301

Query: 1435 SLGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPRPPN 1256
             + ST+LK   R E+SG++I+SIL +KD                   +LEKDKRPPRPP+
Sbjct: 302  IISSTALKSQ-RHESSGRVIKSILLHKDSRR-IQSSGVQSEPQMQTSNLEKDKRPPRPPH 359

Query: 1255 VQLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXXXXX 1076
              L LKD NG P+D+AV NDLHGF +EKQE+RTRNKDRPDR VWT LRR           
Sbjct: 360  T-LVLKDANGTPDDQAVANDLHGFPNEKQERRTRNKDRPDRVVWT-LRRSEGSCASDESL 417

Query: 1075 XXXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVKTL--GRISHSSLDNGSYKHGGRRGP 902
                         S++ +HG+ + D  N RSGEVK L  GR +HSSLDNGS KH GRRGP
Sbjct: 418  SSSASLSTQSGFDSSQVNHGDVKVDTLNLRSGEVKALGSGRSNHSSLDNGSQKHSGRRGP 477

Query: 901  SHNVKDGDVSSVMNEGKPSKR-GSSSYGSHEKQVWVQKSSSGS 776
             H V+D D S+V  EGK  KR G+S YGSHEKQVWVQKSSSGS
Sbjct: 478  PHPVRDADGSTV--EGKTVKRGGASGYGSHEKQVWVQKSSSGS 518


>ref|XP_011092289.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Sesamum
            indicum] gi|747089317|ref|XP_011092290.1| PREDICTED:
            regulator of nonsense transcripts UPF3-like [Sesamum
            indicum] gi|747089319|ref|XP_011092291.1| PREDICTED:
            regulator of nonsense transcripts UPF3-like [Sesamum
            indicum]
          Length = 518

 Score =  537 bits (1383), Expect = e-149
 Identities = 297/526 (56%), Positives = 355/526 (67%), Gaps = 7/526 (1%)
 Frame = -3

Query: 2332 MKGSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYIDF 2153
            MKG LDRTKVVLRHLPP ISQS L + +D RF+ RY W +FRPGK+SQK  +YSRAYIDF
Sbjct: 1    MKGPLDRTKVVLRHLPPTISQSNLFDHVDSRFSGRYRWSAFRPGKSSQKHLTYSRAYIDF 60

Query: 2152 KRPEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYLE 1973
             RPEDV+EFAEFF+GHVFVNEKGTQFK IVEYAPSQRVPKQWSKKDGREGTI KDPEYLE
Sbjct: 61   NRPEDVLEFAEFFNGHVFVNEKGTQFKAIVEYAPSQRVPKQWSKKDGREGTILKDPEYLE 120

Query: 1972 FLEFIAKPVENLPSAEIQLERREAERAGTSKDAPIITPLMDFVRQKRASKVGSRRSLSNG 1793
            FLEF+AKPVENLPSAEIQLER+EAERAG  KD PI+TPLMD+VRQKRA+K G+RR++ NG
Sbjct: 121  FLEFLAKPVENLPSAEIQLERKEAERAGAPKDVPIVTPLMDYVRQKRAAKGGARRTMLNG 180

Query: 1792 KLXXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQH 1613
            K                    G  KR+TS TMYVLR+++K  S K+K TY+LVP++DDQ 
Sbjct: 181  KSTRRVGGISSRSPVSGSSKRGSEKRKTS-TMYVLRDSSKGASSKEKPTYLLVPKQDDQQ 239

Query: 1612 PADKSSTPAA-SGAEALEVESGVPRTNDXXXXXXXXXXXXXXXIPHLTGG---VQSATFP 1445
              +KS+  AA S  +ALE+ESG   +                 I +++GG    Q+A  P
Sbjct: 240  LTEKSANLAAVSRTDALELESGGSGSTGIAKKKILLLKGKEKEISNVSGGSSLQQNAATP 299

Query: 1444 VKSSLGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPR 1265
             KSS  S   +QN RRE SG+IIRSIL NKD                   + E+DK+PPR
Sbjct: 300  AKSSQSSAPSRQNQRRETSGRIIRSILLNKDNRQNQPLPVSQSEPRIHNSNQERDKKPPR 359

Query: 1264 PPNVQLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXX 1085
             P++QL  K+TNG PEDK V NDLH   +EKQ++R RNKDRPDRGVWTPLRR        
Sbjct: 360  SPSIQLLQKETNGIPEDKVVSNDLHAVHTEKQDRRMRNKDRPDRGVWTPLRRSDGSHASD 419

Query: 1084 XXXXXXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVKTL--GRISHSSLDNGSYKHGGR 911
                            +      + + +M  AR GE + +  GR  H S+DNGS++H GR
Sbjct: 420  DSLSSSASRASQVLDPAE-----DVKNEMLVARGGEYRQIGSGRGGHYSVDNGSFRH-GR 473

Query: 910  RGPSHNVKDGDVSSVMNEGKPSKR-GSSSYGSHEKQVWVQKSSSGS 776
            R  ++N+KD D SSV+ EGKPS+R GSS YG HEKQVWVQKSSSGS
Sbjct: 474  RSSAYNIKDVDGSSVL-EGKPSRRGGSSGYGPHEKQVWVQKSSSGS 518


>ref|XP_007221816.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
            gi|462418752|gb|EMJ23015.1| hypothetical protein
            PRUPE_ppa004923mg [Prunus persica]
          Length = 485

 Score =  536 bits (1382), Expect = e-149
 Identities = 302/524 (57%), Positives = 347/524 (66%), Gaps = 4/524 (0%)
 Frame = -3

Query: 2335 LMKGSLDRTKVVLRHLPPAISQSMLTEQIDGRFADRYNWLSFRPGKNSQKRQSYSRAYID 2156
            ++K  LDRTKVVLRHLPP+ISQ+ L EQID  F+ RYNW++FRPGK SQK  SYSRAYID
Sbjct: 1    MLKDQLDRTKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVAFRPGKRSQKNPSYSRAYID 60

Query: 2155 FKRPEDVVEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIFKDPEYL 1976
             KRPEDV+EFAEFFDGH+FVNEKG+QFK IVEYAPSQRVPKQWSKKDGREGTIF+DPEYL
Sbjct: 61   LKRPEDVIEFAEFFDGHLFVNEKGSQFKVIVEYAPSQRVPKQWSKKDGREGTIFRDPEYL 120

Query: 1975 EFLEFIAKPVENLPSAEIQLERREAERAGTSKDAPIITPLMDFVRQKRASKVGSRRSLSN 1796
            EFLEF+AKP ENLPSAEIQLERREAER+G  KDAPI+TPLMDFVRQKRASK GSRRSL+N
Sbjct: 121  EFLEFLAKPAENLPSAEIQLERREAERSGAGKDAPIVTPLMDFVRQKRASKAGSRRSLTN 180

Query: 1795 GKLXXXXXXXXXXXXXXXXXXXGLGKRRTSTTMYVLRETAKSTSGKDKSTYILVPRRDDQ 1616
            GK                    G  ++R S TMYVLR+  K+TS KDKSTYILVP+RDDQ
Sbjct: 181  GKTSRRAGGPSSRSPSLATSKRGSERKRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQ 240

Query: 1615 HPADKSSTPA-ASGAEALEVESGVPRTNDXXXXXXXXXXXXXXXIPHLTGGV-QSATFPV 1442
             P++KS T A A+G   LE ESGV    D               I H+   + Q  +   
Sbjct: 241  QPSEKSVTLASAAGTHVLEEESGVSGA-DAVKKKILLLKGKEREITHVPANMSQQQSSSA 299

Query: 1441 KSSLGSTSLKQNLRREASGKIIRSILQNKDGHHXXXXXXXXXXXXXXXXSLEKDKRPPRP 1262
            K+  G+ +LKQNLRR+ +G+IIR IL NKD                   S ++DKRPPR 
Sbjct: 300  KNMGGTIALKQNLRRQENGRIIRGILLNKDARQSQSSGIYSAQQIQTSNS-DRDKRPPRS 358

Query: 1261 PNVQLFLKDTNGAPEDKAVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRRXXXXXXXXX 1082
             +VQL LKDTNGAP+   VGNDLHG  SEKQEKR RNK+RPDR VWTPL           
Sbjct: 359  QHVQLILKDTNGAPDYNIVGNDLHGICSEKQEKRIRNKERPDRVVWTPLN---------- 408

Query: 1081 XXXXXXXXXXXXXXXSTEGSHGEFRTDMSNARSGEVKTLGRISHSSLDN--GSYKHGGRR 908
                                    R D S+A    + +  + +HS LD+  G +KH GRR
Sbjct: 409  ------------------------RLDGSSASDESLSSAFQPAHSLLDSSEGCHKHHGRR 444

Query: 907  GPSHNVKDGDVSSVMNEGKPSKRGSSSYGSHEKQVWVQKSSSGS 776
            G +H VKD D S V  EGK SKRG   YGSHEKQVWVQKSSSGS
Sbjct: 445  GTTHGVKDLDGSPVAGEGKHSKRG---YGSHEKQVWVQKSSSGS 485