BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00001477
         (1332 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC ...   365   5e-98
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC ...   359   3e-96
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   347   2e-92
ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC ...   336   2e-89
gb|AKC88690.1| sigma factor [Melianthus villosus]                     332   6e-88
gb|AKC88685.1| sigma factor [Francoa sonchifolia]                     327   2e-86
ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun...   322   6e-85
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...   312   5e-82
ref|XP_008220144.1| PREDICTED: RNA polymerase sigma factor sigC-...   310   1e-81
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The...   310   2e-81
ref|XP_011019551.1| PREDICTED: RNA polymerase sigma factor sigC ...   309   4e-81
ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC ...   308   5e-81
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu...   308   9e-81
ref|XP_010244378.1| PREDICTED: RNA polymerase sigma factor sigC ...   307   1e-80
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-...   307   2e-80
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC ...   304   1e-79
gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythra...   303   2e-79
gb|AKC88689.1| sigma factor [Hypseocharis bilobata]                   299   3e-78
ref|XP_009623297.1| PREDICTED: RNA polymerase sigma factor sigC ...   299   4e-78
gb|KDO79965.1| hypothetical protein CISIN_1g009449mg [Citrus sin...   299   4e-78

>ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Sesamum
            indicum]
          Length = 556

 Score =  365 bits (937), Expect = 5e-98
 Identities = 213/399 (53%), Positives = 261/399 (65%), Gaps = 11/399 (2%)
 Frame = -1

Query: 1164 GFRLNLKLA-FAVHXXXXXXXXXXXXXXXFRGRESSHDLAKVSFPSVVSWESETSYNDLL 988
            GFRLNLK +  +V                 RGR++S+ LA++S  SV+  E+ET  ND  
Sbjct: 2    GFRLNLKWSGLSVQSPFSTSTSSLPYTYPCRGRDTSYILARLSASSVLYGETET-LNDAS 60

Query: 987  EAQTRTSASQTLENYCLETEGMKVNVGKRS----------HVHMPTRENKLTCLTSLQAN 838
                 +S+ Q LENY L T   KV VGK S          H+     E+KL  LTSLQA 
Sbjct: 61   RVHVCSSSPQLLENYYLGTRETKVAVGKGSSDGLSSLLEKHIETSNSEDKLAYLTSLQAT 120

Query: 837  EISQYRXXXXXXXXXXXMFSSSDVVRLERDIILQLERLGALKLFHTCLSRTLKTPNFFDL 658
            ++SQ+R           MFS S+VVRLERDI+ QLERLGAL+LF++CLSRTLK+   FDL
Sbjct: 121  QLSQFRLLMKNLDMLEDMFSDSNVVRLERDILEQLERLGALRLFYSCLSRTLKSSTSFDL 180

Query: 657  SNAPTELVEEHRLNGIADDHSGKILXXXXXXXXXXXXXXXXXXKANCVSALALPSKTIHK 478
            SNA TELVEE ++N   D+H G+++                  ++  ++   LP+ TI K
Sbjct: 181  SNATTELVEEPKVNDSVDNHVGEVVRSGRKELRKLRRKRMLDKESG-ITTQELPTVTISK 239

Query: 477  QPQQXXXXXXXXXXXXXXXXXKMVRNEAEMSRGVKLVAGLERIRTILEQETGQVASLSSW 298
            Q +                   + RNEAEMS GVKLVA LE++RTILE+ETGQVASLSSW
Sbjct: 240  QHKYASARRASRSRNKRQR---IARNEAEMSSGVKLVAELEKVRTILEEETGQVASLSSW 296

Query: 297  AEAAGVDKKELQQQLHFGWYCRDELIKSSRSLVLYLARNYRGLGVAFEDLIQAGKSGVLQ 118
            AEAAG+ KKELQQ LH+GW+CRDEL++S+RSLVL++ARNY GLGVAFEDLIQAG  GVLQ
Sbjct: 297  AEAAGIKKKELQQNLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQ 356

Query: 117  GAARFDHSRGYKFSTYVQYWIRKSMSTLVAQHARGIRIP 1
            GA RFD SRGYKFSTYVQYWIRKSMSTLVA+HARG+RIP
Sbjct: 357  GAERFDQSRGYKFSTYVQYWIRKSMSTLVARHARGVRIP 395


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC [Vitis vinifera]
            gi|296081598|emb|CBI20603.3| unnamed protein product
            [Vitis vinifera]
          Length = 561

 Score =  359 bits (922), Expect = 3e-96
 Identities = 203/401 (50%), Positives = 250/401 (62%), Gaps = 10/401 (2%)
 Frame = -1

Query: 1173 MGTGFRLNLKLAFAVHXXXXXXXXXXXXXXXFRGRESSHDLAKVSFPSVVSWESETSYND 994
            MG GFRLNLK  F +                 +G+E+S D  + SFPSV S + E+ Y D
Sbjct: 1    MGMGFRLNLKWDFPISCPTLTNSPSRLCTSSVQGKEASFDSTRFSFPSVTSEDCESLYKD 60

Query: 993  LLEAQTRTS-ASQTLENYCLETEGMKVNVGKRSHVHM---------PTRENKLTCLTSLQ 844
              +    +S A QT EN     E MK+ +GK SH  +         P  E+    +  LQ
Sbjct: 61   PFKPFACSSGALQTFENDYSAMEAMKMKIGKCSHGDLFKIVNASQAPIGEDISASVAGLQ 120

Query: 843  ANEISQYRXXXXXXXXXXXMFSSSDVVRLERDIILQLERLGALKLFHTCLSRTLKTPNFF 664
            A++ SQ+            MF+ S++VRLERDI++QL RLGALKLF  CLSRTLKT   F
Sbjct: 121  ASKASQFSLLLENLDILEEMFADSNMVRLERDIMVQLGRLGALKLFQICLSRTLKTSTSF 180

Query: 663  DLSNAPTELVEEHRLNGIADDHSGKILXXXXXXXXXXXXXXXXXXKANCVSALALPSKTI 484
            DL +APTE + E + NG  DDH  K++                  KA+ + A  LPSKTI
Sbjct: 181  DLFSAPTEHIRECQTNGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFPLPSKTI 240

Query: 483  HKQPQQXXXXXXXXXXXXXXXXXKMVRNEAEMSRGVKLVAGLERIRTILEQETGQVASLS 304
             K P +                    +NEAEMS+GVKLVA LERIR  LE+E G VASLS
Sbjct: 241  RKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVASLS 300

Query: 303  SWAEAAGVDKKELQQQLHFGWYCRDELIKSSRSLVLYLARNYRGLGVAFEDLIQAGKSGV 124
            +WAEAAGVDKK LQQQL FGWYCRDEL++S+ SLVLY+ARNYRG+GVAFED++QAG  GV
Sbjct: 301  NWAEAAGVDKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDILQAGNLGV 360

Query: 123  LQGAARFDHSRGYKFSTYVQYWIRKSMSTLVAQHARGIRIP 1
            LQGA RFDH++GY+FSTYVQYWIRKSMSTLVA+HARG++IP
Sbjct: 361  LQGAERFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKIP 401


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  347 bits (889), Expect = 2e-92
 Identities = 193/369 (52%), Positives = 239/369 (64%), Gaps = 10/369 (2%)
 Frame = -1

Query: 1077 RGRESSHDLAKVSFPSVVSWESETSYNDLLEAQTRTS-ASQTLENYCLETEGMKVNVGKR 901
            +G+E+S D  + SFPSV S + E+ Y D  +    +S A QT EN     E MK+ +GK 
Sbjct: 83   QGKEASFDSTRFSFPSVTSEDCESLYKDPFKPFACSSGALQTFENDYSAMEAMKMKIGKC 142

Query: 900  SHVHM---------PTRENKLTCLTSLQANEISQYRXXXXXXXXXXXMFSSSDVVRLERD 748
            SH  +         P  E+    +  LQA++ SQ+            MF+ S++VRLERD
Sbjct: 143  SHGDLFKIVNASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVRLERD 202

Query: 747  IILQLERLGALKLFHTCLSRTLKTPNFFDLSNAPTELVEEHRLNGIADDHSGKILXXXXX 568
            I++QL RLGALKLF  CLSRTLKT   FDL +APTE + E + NG  DDH  K++     
Sbjct: 203  IMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVVVRSGK 262

Query: 567  XXXXXXXXXXXXXKANCVSALALPSKTIHKQPQQXXXXXXXXXXXXXXXXXKMVRNEAEM 388
                         KA+ + A  LPSKTI K P +                    +NEAEM
Sbjct: 263  KEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEM 322

Query: 387  SRGVKLVAGLERIRTILEQETGQVASLSSWAEAAGVDKKELQQQLHFGWYCRDELIKSSR 208
            S+GVKLVA LERIR  LE+E G VASLS+WAEAAGVDKK LQQQL FGWYCRDEL++S+ 
Sbjct: 323  SKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLRSTH 382

Query: 207  SLVLYLARNYRGLGVAFEDLIQAGKSGVLQGAARFDHSRGYKFSTYVQYWIRKSMSTLVA 28
            SLVLY+ARNYRG+GVAFED++QAG  GVLQGA RFDH++GY+FSTYVQYWIRKSMSTLVA
Sbjct: 383  SLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVA 442

Query: 27   QHARGIRIP 1
            +HARG++IP
Sbjct: 443  RHARGVKIP 451


>ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC [Erythranthe guttatus]
          Length = 562

 Score =  336 bits (862), Expect = 2e-89
 Identities = 202/401 (50%), Positives = 248/401 (61%), Gaps = 13/401 (3%)
 Frame = -1

Query: 1164 GFRLNLK-LAFAVHXXXXXXXXXXXXXXXFRGRESSHDLAKVSFPSVVSWESETSYNDLL 988
            GFRLNL     +V                 RGR+SS+ LA+ S  SV+  ++ET  +   
Sbjct: 2    GFRLNLNWCGLSVQSPLSTSTSSWPTSSSCRGRDSSYFLARSSAASVIYGDTETLNDTSR 61

Query: 987  EAQTRTSASQTLENYCLE-TEGMKVNVGKRSH----------VHMPTRENKLTCLTSLQA 841
                  S+ Q LENY L   + +KV +GK S           + +P  E+KL  LTS+QA
Sbjct: 62   GIHVYPSSHQLLENYYLGGAKQLKVALGKGSSDSLYSLLDSDIQIPKNEDKLENLTSVQA 121

Query: 840  NEISQYRXXXXXXXXXXXMFSSSDVVRLERDIILQLERLGALKLFHTCLSRTLKTPNFFD 661
             + S+ R           MF+ S+ VRLE DI+ QLERLGAL+LFH+CLSRT+K+   FD
Sbjct: 122  TQASKLRLLMKNLDVLEDMFADSNAVRLEGDILEQLERLGALRLFHSCLSRTIKSYTSFD 181

Query: 660  LSNAPTELVEE-HRLNGIADDHSGKILXXXXXXXXXXXXXXXXXXKANCVSALALPSKTI 484
            LS+ PTE+VEE  R+N   D+H GK+                     +  +    PSKTI
Sbjct: 182  LSDGPTEIVEECARVNDSVDNHLGKVFVHSGKKELRKLRRKRTSDNES-PTIQESPSKTI 240

Query: 483  HKQPQQXXXXXXXXXXXXXXXXXKMVRNEAEMSRGVKLVAGLERIRTILEQETGQVASLS 304
             K  QQ                 K  RNEA+MS GVK VA LE+IRT LEQETGQ+ASLS
Sbjct: 241  SKDLQQLKFAIAGRTPRSRNKRQKTARNEADMSSGVKRVAELEKIRTKLEQETGQIASLS 300

Query: 303  SWAEAAGVDKKELQQQLHFGWYCRDELIKSSRSLVLYLARNYRGLGVAFEDLIQAGKSGV 124
            +WAEAAG+ KKELQQ LH+GW+CRDEL++S+ SLVL++ARNY GLGVAFEDLIQAG  GV
Sbjct: 301  NWAEAAGIKKKELQQHLHYGWHCRDELLRSTHSLVLFIARNYSGLGVAFEDLIQAGNIGV 360

Query: 123  LQGAARFDHSRGYKFSTYVQYWIRKSMSTLVAQHARGIRIP 1
            LQGA RFD SRGYKFSTYVQYWIRKSMSTLVA+HARG+RIP
Sbjct: 361  LQGAERFDQSRGYKFSTYVQYWIRKSMSTLVAKHARGVRIP 401


>gb|AKC88690.1| sigma factor [Melianthus villosus]
          Length = 558

 Score =  332 bits (850), Expect = 6e-88
 Identities = 190/400 (47%), Positives = 245/400 (61%), Gaps = 9/400 (2%)
 Frame = -1

Query: 1173 MGTGFRLNLKLAFAVHXXXXXXXXXXXXXXXFRGRESSHDLAKVSFPSVVSWESETSYND 994
            MG GF+L+LK  F +                 RGRE+    A +SF S +S E +T Y +
Sbjct: 1    MGIGFKLHLKWGFPLQSHPLPDSPSRLSSSSVRGREAYISSASLSFLSNISEEGDTCYRN 60

Query: 993  LLEAQTRTSAS-QTLENYCLETEGMKVNVGKRSHVHMPTR--------ENKLTCLTSLQA 841
            LL A+  + AS QTL+   L+ E MK+N+GKRS  ++           E + T   SL+ 
Sbjct: 61   LLNAKACSFASPQTLDGGSLKFEEMKINIGKRSGSNLRNMIDGNQRLGEGRYTSQISLET 120

Query: 840  NEISQYRXXXXXXXXXXXMFSSSDVVRLERDIILQLERLGALKLFHTCLSRTLKTPNFFD 661
              ISQ+R            F  S++  LE+DI+ QLE+LGA KLF T LSRTL+  N FD
Sbjct: 121  CNISQFRLLVQNLDTLEGTFVDSNISLLEKDILKQLEKLGARKLFDTRLSRTLRASNLFD 180

Query: 660  LSNAPTELVEEHRLNGIADDHSGKILXXXXXXXXXXXXXXXXXXKANCVSALALPSKTIH 481
            LS+ P   +++   N I  D  GK                     +N +S+++LP K + 
Sbjct: 181  LSDVPIGNIKDPETNTIMGDQIGKTFVCSGKKAERKSRRARASENSNKMSSISLPLKAVR 240

Query: 480  KQPQQXXXXXXXXXXXXXXXXXKMVRNEAEMSRGVKLVAGLERIRTILEQETGQVASLSS 301
            K  Q+                  + RNEAEMSRGVK++A LERI+TILE+ETG++A+LSS
Sbjct: 241  KGFQKPTLSSRGRRTM-------IARNEAEMSRGVKVIADLERIKTILEKETGRIATLSS 293

Query: 300  WAEAAGVDKKELQQQLHFGWYCRDELIKSSRSLVLYLARNYRGLGVAFEDLIQAGKSGVL 121
            WAEAAGVDKK+L Q L +GWYCRDEL++S+RSLVLYLARNYRGLG+A EDL+Q+G  GVL
Sbjct: 294  WAEAAGVDKKDLHQHLLYGWYCRDELLRSTRSLVLYLARNYRGLGIAHEDLLQSGNLGVL 353

Query: 120  QGAARFDHSRGYKFSTYVQYWIRKSMSTLVAQHARGIRIP 1
            QGA RFDH+RGYK STYVQYWIRKSMS  VAQHARG++IP
Sbjct: 354  QGAERFDHTRGYKLSTYVQYWIRKSMSRTVAQHARGVKIP 393


>gb|AKC88685.1| sigma factor [Francoa sonchifolia]
          Length = 540

 Score =  327 bits (837), Expect = 2e-86
 Identities = 188/388 (48%), Positives = 236/388 (60%)
 Frame = -1

Query: 1164 GFRLNLKLAFAVHXXXXXXXXXXXXXXXFRGRESSHDLAKVSFPSVVSWESETSYNDLLE 985
            GFRLNLK  F +                 RGRE+S + A++SF S++S E ET    L++
Sbjct: 2    GFRLNLKWGFPIQSHSLPNSPSRLCSSSVRGREASINSARLSFLSIISEEGETLRRVLVK 61

Query: 984  AQTRTSASQTLENYCLETEGMKVNVGKRSHVHMPTRENKLTCLTSLQANEISQYRXXXXX 805
            A   + A++ +    LE E +   +        PT E K T   S++A + S +R     
Sbjct: 62   AYACSFAARQM----LEKENLHSMIDDN-----PTEEGKSTSQMSVEARKASHFRLLVQN 112

Query: 804  XXXXXXMFSSSDVVRLERDIILQLERLGALKLFHTCLSRTLKTPNFFDLSNAPTELVEEH 625
                   F+ S V+RLE DI+LQLERLGA  LF TCLS+TL+  N  DLSN P E +EE 
Sbjct: 113  LDVLEKTFADSSVLRLESDILLQLERLGARNLFDTCLSKTLEDSN--DLSNVPIEHMEEQ 170

Query: 624  RLNGIADDHSGKILXXXXXXXXXXXXXXXXXXKANCVSALALPSKTIHKQPQQXXXXXXX 445
            +     DD  GKI                    A+ +S++ L SKT  K  QQ       
Sbjct: 171  KTVIAMDDQIGKIFVCSRKKEERKSKRARASENASKISSMPLRSKTARKGYQQPAHSSSK 230

Query: 444  XXXXXXXXXXKMVRNEAEMSRGVKLVAGLERIRTILEQETGQVASLSSWAEAAGVDKKEL 265
                       + RNEAEMSRGVK++  LERIRT LE+ETG+V SLS+WAEAAG+D+K L
Sbjct: 231  RGSNSRGRRLMIARNEAEMSRGVKVIQDLERIRTTLEKETGRVVSLSTWAEAAGIDEKVL 290

Query: 264  QQQLHFGWYCRDELIKSSRSLVLYLARNYRGLGVAFEDLIQAGKSGVLQGAARFDHSRGY 85
             Q L +GWYCRDEL++S+RSLVLYLARNYRGLG+A EDL+QAGK GVLQGA RFDH+RGY
Sbjct: 291  NQDLRYGWYCRDELLRSTRSLVLYLARNYRGLGIASEDLLQAGKLGVLQGAERFDHTRGY 350

Query: 84   KFSTYVQYWIRKSMSTLVAQHARGIRIP 1
            K STYVQYWIRKSMS +VAQHARG++IP
Sbjct: 351  KLSTYVQYWIRKSMSRMVAQHARGVQIP 378


>ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
            gi|462419859|gb|EMJ24122.1| hypothetical protein
            PRUPE_ppa003696mg [Prunus persica]
          Length = 555

 Score =  322 bits (824), Expect = 6e-85
 Identities = 196/397 (49%), Positives = 242/397 (60%), Gaps = 6/397 (1%)
 Frame = -1

Query: 1173 MGTGFRLNLKLAFAVHXXXXXXXXXXXXXXXF-RGRESSHDLAKVSFPSVVSWESETSYN 997
            MG GFRLNLK  F VH                 RGRE S + A++SF SV+S E E S  
Sbjct: 1    MGLGFRLNLKCGFPVHSSHWQTTSPSKISSTSVRGREGSFNSARLSFLSVISEEGEASSK 60

Query: 996  DLLEAQTRTSAS-QTLENYCLETEGMKV---NVGKR-SHVHMPTRENKLTCLTSLQANEI 832
            D L+  T  SAS Q LE+   E E +K     V K  S   MP  E K      L+A   
Sbjct: 61   DPLKVYTFPSASPQILEDGVSELEEVKTAFRRVPKSFSDNQMPVAEGKFISSKGLEACTA 120

Query: 831  SQYRXXXXXXXXXXXMFSSSDVVRLERDIILQLERLGALKLFHTCLSRTLKTPNFFDLSN 652
            S +             F++SDV++LE++I+LQL RLGALKLF  CLSRTLKT +F DLS+
Sbjct: 121  SHFSLLLQNLNVLEETFATSDVLKLEKEILLQLARLGALKLFDICLSRTLKTSSFLDLSD 180

Query: 651  APTELVEEHRLNGIADDHSGKILXXXXXXXXXXXXXXXXXXKANCVSALALPSKTIHKQP 472
             PT  VEE ++    D++ G+I+                      VS+ +LP KTI K  
Sbjct: 181  IPTVPVEEGKMERKEDNNVGEIIVRSGKKEERRSRKRTSDNAI--VSSNSLPPKTIWKGL 238

Query: 471  QQXXXXXXXXXXXXXXXXXKMVRNEAEMSRGVKLVAGLERIRTILEQETGQVASLSSWAE 292
            ++                  + +NEAEMS GVK++A LERI+  LE+ETG+VA+L  WAE
Sbjct: 239  KKPTLSSGKRASNYRSRRLTISKNEAEMSIGVKVIADLERIKETLEKETGKVATLRCWAE 298

Query: 291  AAGVDKKELQQQLHFGWYCRDELIKSSRSLVLYLARNYRGLGVAFEDLIQAGKSGVLQGA 112
            AAGV +K L Q L FGWYC+DELI+S+RSLVLYLARNYRGLGVA +DL+QAG  G+LQGA
Sbjct: 299  AAGVHEKVLLQHLRFGWYCQDELIRSTRSLVLYLARNYRGLGVALDDLMQAGNLGLLQGA 358

Query: 111  ARFDHSRGYKFSTYVQYWIRKSMSTLVAQHARGIRIP 1
             RFDHSRGY+FSTYVQYWIRKSMS LVAQHARG++IP
Sbjct: 359  ERFDHSRGYRFSTYVQYWIRKSMSRLVAQHARGVQIP 395


>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 560

 Score =  312 bits (799), Expect = 5e-82
 Identities = 181/400 (45%), Positives = 242/400 (60%), Gaps = 9/400 (2%)
 Frame = -1

Query: 1173 MGTGFRLNLKLAFAVHXXXXXXXXXXXXXXXF-RGRESSHDLAKVSFPSVVSWESETSYN 997
            MG GFRLNLKL F  H               F RGRE++   +++SF SV+S E + ++ 
Sbjct: 1    MGFGFRLNLKLDFPFHSPNSPSRLSSSPSSSFVRGREATSYQSRLSFLSVISEEGDIAHR 60

Query: 996  DLLEAQTRTSASQTLENYCLETEGMKVNVGKRSHVHMP-------TRENKLTCLTSLQAN 838
            D L+    + A QT+EN   + EG KVN GKRSH  +        + +  +    S    
Sbjct: 61   DPLKTYAYSYAVQTVENEHSQGEGFKVNFGKRSHFGLNIIGDAEVSLKEDIFVSPSSTKE 120

Query: 837  EISQYRXXXXXXXXXXXMFSSSDVVRLERDIILQLERLGALKLFHTCLSRTLKTPNFFDL 658
              S++             F+ SD  +LE DI+LQL +LGALKLF+TCL+RTL+T N  ++
Sbjct: 121  RTSRFSLLLENLNILEQSFADSDASKLEEDILLQLGKLGALKLFNTCLTRTLETTNVLEV 180

Query: 657  SNAPTELVEEHRLNGIADDHSGKILXXXXXXXXXXXXXXXXXXKANCVS-ALALPSKTIH 481
            S+  TE++ E  +NG + ++  K++                  +    S +L LPS+ I 
Sbjct: 181  SDVHTEIIGECNINGTSINNQIKVVVHTAKKEERKSRRERASARKGHKSPSLPLPSRPIQ 240

Query: 480  KQPQQXXXXXXXXXXXXXXXXXKMVRNEAEMSRGVKLVAGLERIRTILEQETGQVASLSS 301
               ++                  + RNEAEM+RG+K++A LE+IRT LE+ET +V SLS 
Sbjct: 241  SGSEKPTVSSGKKASKSKSRRLIIARNEAEMARGIKVLADLEKIRTTLEEETERVVSLSC 300

Query: 300  WAEAAGVDKKELQQQLHFGWYCRDELIKSSRSLVLYLARNYRGLGVAFEDLIQAGKSGVL 121
            WAEAAG+D K LQQQL FGWYCRDELIKS+RSLVLY ARNYRG G+A EDL+QAG  GVL
Sbjct: 301  WAEAAGLDVKVLQQQLSFGWYCRDELIKSTRSLVLYFARNYRGTGIALEDLLQAGNLGVL 360

Query: 120  QGAARFDHSRGYKFSTYVQYWIRKSMSTLVAQHARGIRIP 1
            +GA RFDH+RGY+FSTYVQYWIRKSMS +V++ ARGI+IP
Sbjct: 361  EGAERFDHTRGYRFSTYVQYWIRKSMSKIVSRLARGIQIP 400


>ref|XP_008220144.1| PREDICTED: RNA polymerase sigma factor sigC-like [Prunus mume]
          Length = 553

 Score =  310 bits (795), Expect = 1e-81
 Identities = 189/395 (47%), Positives = 236/395 (59%), Gaps = 4/395 (1%)
 Frame = -1

Query: 1173 MGTGFRLNLKLAFAVHXXXXXXXXXXXXXXXF-RGRESSHDLAKVSFPSVVSWESETSYN 997
            MG GFRLNLK  F VH                 RGRE S + A++SF SV+S E E S  
Sbjct: 1    MGLGFRLNLKCGFPVHSSYWQTTSPSKLSSTSVRGREGSFNSARLSFLSVISEEGEASSK 60

Query: 996  DLLEAQTRTSAS-QTLENYCLETEGMKVNVGKRS--HVHMPTRENKLTCLTSLQANEISQ 826
            D L+  T  SAS Q LE+   E E        +S     MP  E K      L+A   S 
Sbjct: 61   DPLKVYTCPSASPQILEDGVSEMEEAAFRRVPKSISDNRMPVAEGKFISSKGLEACTASH 120

Query: 825  YRXXXXXXXXXXXMFSSSDVVRLERDIILQLERLGALKLFHTCLSRTLKTPNFFDLSNAP 646
            +             F++S+V++LE++I+LQL RLGALKLF  CLSRTLKT +F DLS+ P
Sbjct: 121  FSLLLQNLNVLEETFATSNVLKLEKEILLQLARLGALKLFDICLSRTLKTSSFLDLSDIP 180

Query: 645  TELVEEHRLNGIADDHSGKILXXXXXXXXXXXXXXXXXXKANCVSALALPSKTIHKQPQQ 466
            T  VEE ++    D++  +I+                      VS+ +LP KTI K  + 
Sbjct: 181  TVPVEEGKMERKEDNNVFEIIVRSGKKEERRSRKRTSDNAI--VSSNSLPPKTIWKGLKN 238

Query: 465  XXXXXXXXXXXXXXXXXKMVRNEAEMSRGVKLVAGLERIRTILEQETGQVASLSSWAEAA 286
                              + +NEAEMS GVK++A LERI+  LE+ETG+V +L  WAEAA
Sbjct: 239  PTLSSGKRASNYRSRRLTISKNEAEMSIGVKVIADLERIKETLEKETGKVVTLRCWAEAA 298

Query: 285  GVDKKELQQQLHFGWYCRDELIKSSRSLVLYLARNYRGLGVAFEDLIQAGKSGVLQGAAR 106
            GV ++ L Q L FGWYC+DEL++S+RSLVLYLARNYRGLGVA +DLIQAG  G+LQGA R
Sbjct: 299  GVHERVLLQHLRFGWYCQDELMRSTRSLVLYLARNYRGLGVALDDLIQAGNLGLLQGAER 358

Query: 105  FDHSRGYKFSTYVQYWIRKSMSTLVAQHARGIRIP 1
            FDHSRGY+FSTYVQYWIRKSMS LVAQHARG++IP
Sbjct: 359  FDHSRGYRFSTYVQYWIRKSMSRLVAQHARGVQIP 393


>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
            gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
            C, putative [Theobroma cacao]
          Length = 848

 Score =  310 bits (793), Expect = 2e-81
 Identities = 180/365 (49%), Positives = 222/365 (60%), Gaps = 11/365 (3%)
 Frame = -1

Query: 1062 SHDLAKVSFPSVVSWESETSYNDLLEAQTRTSASQTLENYCLETEGMKVNVGKRSHVHM- 886
            SH LA  + PS +      S  D L+A   ++A QTLE  CLE E MKVN+GK S  H  
Sbjct: 327  SHFLA--NSPSRLPSSGVLSLKDPLKAYASSAAPQTLEKGCLEIEEMKVNIGKGSQAHSH 384

Query: 885  ------PTRE----NKLTCLTSLQANEISQYRXXXXXXXXXXXMFSSSDVVRLERDIILQ 736
                   T E    +K +  TS QA + S Y             F+ SDV+ LER+I+LQ
Sbjct: 385  SLTMIDKTHELIGGDKSSSRTSPQACKASHYSLLMENLDVLEETFADSDVLTLEREILLQ 444

Query: 735  LERLGALKLFHTCLSRTLKTPNFFDLSNAPTELVEEHRLNGIADDHSGKILXXXXXXXXX 556
            L R GALKLF+TCLSRTLK  N  DLS+ P     +  +N   D     I+         
Sbjct: 445  LGRFGALKLFNTCLSRTLKASNILDLSDVPANS-GDCNMNLSVDGQKDNIVVCSRKKKQR 503

Query: 555  XXXXXXXXXKANCVSALALPSKTIHKQPQQXXXXXXXXXXXXXXXXXKMVRNEAEMSRGV 376
                         +S   +PS T+H + Q+                 ++ RNEAEMS+GV
Sbjct: 504  KKIRERALENPTIISTQLMPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGV 563

Query: 375  KLVAGLERIRTILEQETGQVASLSSWAEAAGVDKKELQQQLHFGWYCRDELIKSSRSLVL 196
            K+VA LERIRT LE+ETG+ ASLS WAEAAGV +K LQQ L FGWYCRDEL++S+RSLVL
Sbjct: 564  KVVANLERIRTTLEEETGRAASLSCWAEAAGVSEKVLQQHLRFGWYCRDELLRSTRSLVL 623

Query: 195  YLARNYRGLGVAFEDLIQAGKSGVLQGAARFDHSRGYKFSTYVQYWIRKSMSTLVAQHAR 16
            Y ARNYRGLG+A EDLIQAG  GVLQGA RFDH+RGY+FSTYVQ+WIRKS+S +VA+HAR
Sbjct: 624  YFARNYRGLGIAHEDLIQAGSLGVLQGAERFDHTRGYRFSTYVQFWIRKSVSRIVARHAR 683

Query: 15   GIRIP 1
            GI++P
Sbjct: 684  GIQVP 688


>ref|XP_011019551.1| PREDICTED: RNA polymerase sigma factor sigC [Populus euphratica]
          Length = 559

 Score =  309 bits (791), Expect = 4e-81
 Identities = 180/401 (44%), Positives = 236/401 (58%), Gaps = 10/401 (2%)
 Frame = -1

Query: 1173 MGTGFRLNLKLAFAVHXXXXXXXXXXXXXXXFRGRESSHDLAKVSFPSVVSWESETSYND 994
            MG GFR   K    +                 RG E+S + A++SF SVVS E +     
Sbjct: 1    MGVGFRPTPKWGSPMQSHSVTNSTSMFSSFSARGMEASVNQARLSFLSVVSEEGDILNKH 60

Query: 993  LLEAQTRTSASQTLENYCLETEGMKVNVGKRSHVHM---------PTRENKLTCLTSLQA 841
              ++   +SA+Q +EN CL+ E +K+NV K SHV +            E   T  T L+ 
Sbjct: 61   SFKSFACSSAAQNVENDCLQMERLKMNVDKTSHVSINNTMGNDKVSVEEEISTSHTRLRE 120

Query: 840  NEISQYRXXXXXXXXXXXMFSSSDVVRLERDIILQLERLGALKLFHTCLSRTLKTPNFFD 661
               S++            + +  D ++LERDI+LQL RLGAL+ F+ CLSRTL+T N  D
Sbjct: 121  RMTSRFSFLLDNLDTLEKLVADLDALKLERDILLQLGRLGALEFFNACLSRTLQTSNALD 180

Query: 660  LSNAPTELVEEHRLNGIADDHSGK-ILXXXXXXXXXXXXXXXXXXKANCVSALALPSKTI 484
            LS  PTE   E + +G+ DD +GK ++                       ++L+LPSK++
Sbjct: 181  LSAVPTENTGESKTDGMLDDLTGKTVVRTGKKEERKFRRGRAASDNGKKTTSLSLPSKSV 240

Query: 483  HKQPQQXXXXXXXXXXXXXXXXXKMVRNEAEMSRGVKLVAGLERIRTILEQETGQVASLS 304
                Q+                  + RNEA+M+RGVK+ + LERIRT LE+ETGQV SLS
Sbjct: 241  QNNLQKPTFVKRTSSSSSRRSL--IARNEAKMTRGVKVASDLERIRTTLEEETGQVVSLS 298

Query: 303  SWAEAAGVDKKELQQQLHFGWYCRDELIKSSRSLVLYLARNYRGLGVAFEDLIQAGKSGV 124
             WAEA G+DKK LQQQL FGWYCRDELIK++ SLVLY+ARNYRG+G+A EDLIQAG  G+
Sbjct: 299  CWAEATGLDKKVLQQQLQFGWYCRDELIKNTHSLVLYIARNYRGMGIAMEDLIQAGNLGL 358

Query: 123  LQGAARFDHSRGYKFSTYVQYWIRKSMSTLVAQHARGIRIP 1
            LQGA RFD +RGY+FSTYVQYWIRKSM  +V +HARGI+IP
Sbjct: 359  LQGAERFDPTRGYRFSTYVQYWIRKSMLKIVERHARGIQIP 399


>ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
            tomentosiformis]
          Length = 572

 Score =  308 bits (790), Expect = 5e-81
 Identities = 184/401 (45%), Positives = 240/401 (59%), Gaps = 8/401 (1%)
 Frame = -1

Query: 1179 NPMGTGFRLNLKLAFAVHXXXXXXXXXXXXXXXFRGRESSHDLAKVSFPSVVSWESETSY 1000
            N +  GFRL LK  F+V                F+G+E+ +D A+ S    ++ + E S+
Sbjct: 14   NLLAMGFRLYLKWGFSVQPPFSSNSSSWPSSHSFKGKEALYDPAR-SLKPFINEDCEPSH 72

Query: 999  NDLLEAQTRTSASQTLENYCLETEGMKVNVGKRSHVHM----PTRENKLTC----LTSLQ 844
            +D    +T  S  Q   +    T  +K  +G+ S  ++     + +N ++      T L 
Sbjct: 73   SDPFRVRTCLSDPQLWTSDTSVTTEIKTRIGRGSPTNIYGDIGSPKNVISLDGEKPTYLN 132

Query: 843  ANEISQYRXXXXXXXXXXXMFSSSDVVRLERDIILQLERLGALKLFHTCLSRTLKTPNFF 664
                  +            MF+ S+V RLERDI++QL++LGAL+ FHTCLSRT     F 
Sbjct: 133  TTRALHFSLLMKNLDLLENMFADSEVSRLERDIMVQLDKLGALEFFHTCLSRTNHCSTFP 192

Query: 663  DLSNAPTELVEEHRLNGIADDHSGKILXXXXXXXXXXXXXXXXXXKANCVSALALPSKTI 484
            ++ + P EL+EE   +G+  +   K++                   AN +  +   +K I
Sbjct: 193  EVLDVPRELIEEIEKDGLVGNGIDKVVVRSKKKQERKSRRNRASRNANDIITVQPHTKNI 252

Query: 483  HKQPQQXXXXXXXXXXXXXXXXXKMVRNEAEMSRGVKLVAGLERIRTILEQETGQVASLS 304
             +  QQ                 K+ +NEAEMSRGVKLVA LERIR+ILE+ETG+VAS S
Sbjct: 253  QEDLQQPKFFSGKRTHTSRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFS 312

Query: 303  SWAEAAGVDKKELQQQLHFGWYCRDELIKSSRSLVLYLARNYRGLGVAFEDLIQAGKSGV 124
            SWAEAAGV++KELQQ+LHFGWYCRDEL+KS+RSLVLYLARNYRGLGVAFEDLIQAG  GV
Sbjct: 313  SWAEAAGVEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGV 372

Query: 123  LQGAARFDHSRGYKFSTYVQYWIRKSMSTLVAQHARGIRIP 1
            LQGA RFD +RGYKFSTYVQYWIRKS+S LVAQHARGIRIP
Sbjct: 373  LQGAVRFDDTRGYKFSTYVQYWIRKSLSKLVAQHARGIRIP 413


>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
            gi|222854562|gb|EEE92109.1| hypothetical protein
            POPTR_0006s25090g [Populus trichocarpa]
          Length = 559

 Score =  308 bits (788), Expect = 9e-81
 Identities = 181/401 (45%), Positives = 234/401 (58%), Gaps = 10/401 (2%)
 Frame = -1

Query: 1173 MGTGFRLNLKLAFAVHXXXXXXXXXXXXXXXFRGRESSHDLAKVSFPSVVSWESETSYND 994
            MG GFRL  K    +                 RG E+S + A++SF SVVS E +     
Sbjct: 1    MGVGFRLTPKWGSPMQSHSATNSTSMFSSFSARGMEASVNQARLSFLSVVSEEGDILNKH 60

Query: 993  LLEAQTRTSASQTLENYCLETEGMKVNVGKRSHVHM---------PTRENKLTCLTSLQA 841
              ++   +SA+Q +EN CL+ E +K+NV K SHV +            E   T  T L+ 
Sbjct: 61   SFKSFACSSAAQNVENDCLQMERLKMNVDKTSHVSINNMMGNDKVSVEEEISTSHTRLRE 120

Query: 840  NEISQYRXXXXXXXXXXXMFSSSDVVRLERDIILQLERLGALKLFHTCLSRTLKTPNFFD 661
               S+             + +  D ++LERDI+LQL RLGAL+ F+ CLSRTL+T N  D
Sbjct: 121  RMTSRISFLLDNLDTLEKLVADLDALKLERDILLQLGRLGALEFFNACLSRTLQTSNVLD 180

Query: 660  LSNAPTELVEEHRLNGIADDHSGK-ILXXXXXXXXXXXXXXXXXXKANCVSALALPSKTI 484
            LS  PTE   E + +G+  D +GK ++                       ++L+LPSKT+
Sbjct: 181  LSAVPTENTGESKTDGMLGDLTGKTVVRTGKKEERKFRRERAASDNGKKTTSLSLPSKTV 240

Query: 483  HKQPQQXXXXXXXXXXXXXXXXXKMVRNEAEMSRGVKLVAGLERIRTILEQETGQVASLS 304
              Q                     + RNEA+M+RGVK+ + LERIRT LE+ETGQV SLS
Sbjct: 241  --QNNLPKPTFVKRTSSSSSRRSLIARNEAKMTRGVKVASDLERIRTTLEEETGQVVSLS 298

Query: 303  SWAEAAGVDKKELQQQLHFGWYCRDELIKSSRSLVLYLARNYRGLGVAFEDLIQAGKSGV 124
             WAEA G+DKK LQQQL FGWYCRDELIK++ SLVLY+ARNYRG+G+A EDLIQAG  G+
Sbjct: 299  CWAEATGLDKKVLQQQLQFGWYCRDELIKNTHSLVLYIARNYRGMGIAMEDLIQAGNLGL 358

Query: 123  LQGAARFDHSRGYKFSTYVQYWIRKSMSTLVAQHARGIRIP 1
            LQGA RFD +RGY+FSTYVQYWIRKSM  +V +HARGI+IP
Sbjct: 359  LQGAERFDPTRGYRFSTYVQYWIRKSMLKIVERHARGIQIP 399


>ref|XP_010244378.1| PREDICTED: RNA polymerase sigma factor sigC [Nelumbo nucifera]
            gi|720088207|ref|XP_010244379.1| PREDICTED: RNA
            polymerase sigma factor sigC [Nelumbo nucifera]
          Length = 558

 Score =  307 bits (787), Expect = 1e-80
 Identities = 179/397 (45%), Positives = 233/397 (58%), Gaps = 9/397 (2%)
 Frame = -1

Query: 1164 GFRLNLKLAFAVHXXXXXXXXXXXXXXXFRGRESSHDLAKVSFPSVVSWESETSYNDLLE 985
            GF L+ K  F V                 R RE+  + A++SF SV+  ESET   D L+
Sbjct: 2    GFGLDWKWVFPVQSHLLSHSSTRNHSSFVRSREAYFESARMSFLSVIPEESETLQKDPLK 61

Query: 984  AQTRTSASQTLENYCLETEGMKVNVGKRSH---------VHMPTRENKLTCLTSLQANEI 832
            A   +S +    N      G+K+N  K  H         + + T E+    L SLQA +I
Sbjct: 62   AYACSSGTLQPVNNGYAAIGVKMNTSKEFHNSLYDTFEDISIATPEDSSAFLASLQARKI 121

Query: 831  SQYRXXXXXXXXXXXMFSSSDVVRLERDIILQLERLGALKLFHTCLSRTLKTPNFFDLSN 652
            S +            +F SSD++RLE+ I++QLE+LGAL LFH CLSRT+K  +  +L +
Sbjct: 122  SCFSLLMENVEKIEDIFVSSDLIRLEKGILVQLEKLGALNLFHACLSRTVKVSSALNLHS 181

Query: 651  APTELVEEHRLNGIADDHSGKILXXXXXXXXXXXXXXXXXXKANCVSALALPSKTIHKQP 472
            A  E  +++ ++G   DH   I                   +A+   AL    K     P
Sbjct: 182  ALKECSKKYLMDGEMSDHVDHITVPSRRKEERKLRRERESKRASKKPALKSSPKCGIGGP 241

Query: 471  QQXXXXXXXXXXXXXXXXXKMVRNEAEMSRGVKLVAGLERIRTILEQETGQVASLSSWAE 292
            QQ                  + RNE+EMSR VK V+ LERIR+ LE+E G+V S SSWAE
Sbjct: 242  QQSTISIAKRPASAKSRRLMIARNESEMSRAVKEVSCLERIRSNLEEELGRVISFSSWAE 301

Query: 291  AAGVDKKELQQQLHFGWYCRDELIKSSRSLVLYLARNYRGLGVAFEDLIQAGKSGVLQGA 112
            A G+D+KELQQ+LHFGWYCRD+L++S+RSLV+YLARNYRGLG+AFEDL+QAG  GVLQGA
Sbjct: 302  AVGLDEKELQQRLHFGWYCRDKLLRSTRSLVVYLARNYRGLGIAFEDLLQAGNFGVLQGA 361

Query: 111  ARFDHSRGYKFSTYVQYWIRKSMSTLVAQHARGIRIP 1
             RFDH+RGY+FSTYVQYWIRKSMSTLVAQH+RG+ IP
Sbjct: 362  ERFDHTRGYRFSTYVQYWIRKSMSTLVAQHSRGVHIP 398


>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum tuberosum]
          Length = 555

 Score =  307 bits (786), Expect = 2e-80
 Identities = 182/396 (45%), Positives = 238/396 (60%), Gaps = 8/396 (2%)
 Frame = -1

Query: 1164 GFRLNLKLAFAVHXXXXXXXXXXXXXXXFRGRESSHDLAKVSFPSVVSWESETSYNDLLE 985
            GFRL+LK  F+V                F+GRE+ +D A+ S    ++ + E S++D   
Sbjct: 2    GFRLHLKWGFSVQPPFSSNSSSWPSSHSFKGREALYDPAR-SLKPFITGDCEPSHSDPFR 60

Query: 984  AQTRTSASQTLENYCLETEGMKVNVGKRS--HVHMPTRENKLTCL------TSLQANEIS 829
             QT  S  Q   +    T  +K   G+ S  +V+     +K+         T L   +  
Sbjct: 61   VQTCLSDPQLWTSDTSVTTEIKTRNGRGSPSNVYGDIGSHKIGISPDGEKPTYLNTTKSL 120

Query: 828  QYRXXXXXXXXXXXMFSSSDVVRLERDIILQLERLGALKLFHTCLSRTLKTPNFFDLSNA 649
             +            MF+ S++ RLERDI++QLE+LGAL+ FHTCLSRT  +  F  + + 
Sbjct: 121  HFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSTFPKVLDV 180

Query: 648  PTELVEEHRLNGIADDHSGKILXXXXXXXXXXXXXXXXXXKANCVSALALPSKTIHKQPQ 469
            P EL++E   + +  +   K++                   AN +  +   +K I +  Q
Sbjct: 181  PRELIKEVEKDDLVGNAIDKVVVRSRKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQ 240

Query: 468  QXXXXXXXXXXXXXXXXXKMVRNEAEMSRGVKLVAGLERIRTILEQETGQVASLSSWAEA 289
            Q                 K+ +NEAEMSRGVKLVA LERIR+ILE+ETG+VA+ SSWAEA
Sbjct: 241  QPKFYSGKRTQASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATFSSWAEA 300

Query: 288  AGVDKKELQQQLHFGWYCRDELIKSSRSLVLYLARNYRGLGVAFEDLIQAGKSGVLQGAA 109
            AG+++KELQQ+LHFGWYCRDEL+KS+RSLVLYLARNYRGLGVAFEDLIQAG  GVLQGA 
Sbjct: 301  AGIEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAV 360

Query: 108  RFDHSRGYKFSTYVQYWIRKSMSTLVAQHARGIRIP 1
            RFDH+RGYKFSTYVQYWIRKS+S LVAQHARG+RIP
Sbjct: 361  RFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIP 396


>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC [Solanum lycopersicum]
          Length = 551

 Score =  304 bits (779), Expect = 1e-79
 Identities = 180/392 (45%), Positives = 236/392 (60%), Gaps = 4/392 (1%)
 Frame = -1

Query: 1164 GFRLNLKLAFAVHXXXXXXXXXXXXXXXFRGRESSHDLAKVSFPSVVSWESETSYNDLLE 985
            GFRL+LK  F++                F+GRE+ +D A+ S    ++ + E S++D   
Sbjct: 2    GFRLHLKWGFSLQPPFSSNSSSWPSSHSFKGRETLYDPAR-SLKPFINGDCEPSHSDPFR 60

Query: 984  AQTRTSASQTLENYCLETEGMKVNVGKRS--HVHMPTRENKLTCL--TSLQANEISQYRX 817
             QT  S  Q   +    T   K   G+ S  +V+      K+     T L   +   +  
Sbjct: 61   VQTCLSDPQLWTSDASVTTETKTRNGRGSPSNVYGDIGSYKIDGEKPTYLNTTKSLHFSL 120

Query: 816  XXXXXXXXXXMFSSSDVVRLERDIILQLERLGALKLFHTCLSRTLKTPNFFDLSNAPTEL 637
                      MF+ S++ RLERDI++QLE+LGAL+ FHTCLSRT  + +F  + + P EL
Sbjct: 121  LMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSSFPKVLDVPREL 180

Query: 636  VEEHRLNGIADDHSGKILXXXXXXXXXXXXXXXXXXKANCVSALALPSKTIHKQPQQXXX 457
            ++E   + +  +   K++                   AN +  +   +K I +  QQ   
Sbjct: 181  IKEVEKDDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPHTKNIQEDLQQLKF 240

Query: 456  XXXXXXXXXXXXXXKMVRNEAEMSRGVKLVAGLERIRTILEQETGQVASLSSWAEAAGVD 277
                          K+ +NEAEMS+GVKLVA LERIR+ILE+ETGQVA+ SSWA+AAG++
Sbjct: 241  YSGKRTHASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQVATFSSWAKAAGIE 300

Query: 276  KKELQQQLHFGWYCRDELIKSSRSLVLYLARNYRGLGVAFEDLIQAGKSGVLQGAARFDH 97
            +KELQQ LHFGWYCRDEL+KS+RSLVLYLARNYRGLGVAFEDLIQAG  GVLQGA RFDH
Sbjct: 301  QKELQQHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDH 360

Query: 96   SRGYKFSTYVQYWIRKSMSTLVAQHARGIRIP 1
            +RGYKFSTYVQYWIRKS+S LVAQHARG+RIP
Sbjct: 361  TRGYKFSTYVQYWIRKSLSKLVAQHARGVRIP 392


>gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythranthe guttata]
          Length = 478

 Score =  303 bits (776), Expect = 2e-79
 Identities = 170/300 (56%), Positives = 202/300 (67%)
 Frame = -1

Query: 900 SHVHMPTRENKLTCLTSLQANEISQYRXXXXXXXXXXXMFSSSDVVRLERDIILQLERLG 721
           S + +P  E+KL  LTS+QA + S+ R           MF+ S+ VRLE DI+ QLERLG
Sbjct: 30  SDIQIPKNEDKLENLTSVQATQASKLRLLMKNLDVLEDMFADSNAVRLEGDILEQLERLG 89

Query: 720 ALKLFHTCLSRTLKTPNFFDLSNAPTELVEEHRLNGIADDHSGKILXXXXXXXXXXXXXX 541
           AL+LFH+CLSRT+K+   FDLS+ PTE+VEE ++      HSGK                
Sbjct: 90  ALRLFHSCLSRTIKSYTSFDLSDGPTEIVEECKVFV----HSGK--------KELRKLRR 137

Query: 540 XXXXKANCVSALALPSKTIHKQPQQXXXXXXXXXXXXXXXXXKMVRNEAEMSRGVKLVAG 361
                    +    PSKTI K  QQ                 K  RNEA+MS GVK VA 
Sbjct: 138 KRTSDNESPTIQESPSKTISKDLQQLKFAIAGRTPRSRNKRQKTARNEADMSSGVKRVAE 197

Query: 360 LERIRTILEQETGQVASLSSWAEAAGVDKKELQQQLHFGWYCRDELIKSSRSLVLYLARN 181
           LE+IRT LEQETGQ+ASLS+WAEAAG+ KKELQQ LH+GW+CRDEL++S+ SLVL++ARN
Sbjct: 198 LEKIRTKLEQETGQIASLSNWAEAAGIKKKELQQHLHYGWHCRDELLRSTHSLVLFIARN 257

Query: 180 YRGLGVAFEDLIQAGKSGVLQGAARFDHSRGYKFSTYVQYWIRKSMSTLVAQHARGIRIP 1
           Y GLGVAFEDLIQAG  GVLQGA RFD SRGYKFSTYVQYWIRKSMSTLVA+HARG+RIP
Sbjct: 258 YSGLGVAFEDLIQAGNIGVLQGAERFDQSRGYKFSTYVQYWIRKSMSTLVAKHARGVRIP 317


>gb|AKC88689.1| sigma factor [Hypseocharis bilobata]
          Length = 566

 Score =  299 bits (766), Expect = 3e-78
 Identities = 178/403 (44%), Positives = 237/403 (58%), Gaps = 15/403 (3%)
 Frame = -1

Query: 1164 GFRLNLKLAFAVHXXXXXXXXXXXXXXXF------RGRESSHDLAKVSFPSVVSWESETS 1003
            GFRLNLKL F +H                        RE+S +  ++ F S++S E E S
Sbjct: 2    GFRLNLKLGFPIHSHSLPTAPSRLPASSSSSSSSVHAREASFNTTRLFFLSIISEEGEKS 61

Query: 1002 YNDLLEAQTRT-SASQTLENYCLETEGMKVNVGKRSHVH-------MPTRENKLTCLTSL 847
            + D L+A   + +A QTL N  LE   M+ N      +H       M   E   +  TSL
Sbjct: 62   HKDPLKAYASSYAAPQTLGNDFLEMGEMQSNKRSYGGLHSIIEDTLMHVGEGISSSGTSL 121

Query: 846  QANEISQYRXXXXXXXXXXXMFSSSDVVRLERDIILQLERLGALKLFHTCLS-RTLKTPN 670
            + +  + +             F+  +V+RLERDI+LQL RLGALKLF+  LS RT++T N
Sbjct: 122  RVSRPAHFSLLMENLDVLEETFADKNVLRLERDILLQLGRLGALKLFNIFLSSRTIETSN 181

Query: 669  FFDLSNAPTELVEEHRLNGIADDHSGKILXXXXXXXXXXXXXXXXXXKANCVSALALPSK 490
             FDLS+ PTE +++ ++N    +   K +                   +  +S+L LPSK
Sbjct: 182  IFDLSDVPTEDIKDCKVNSTKHERITKKIFHSGKKEKRKSRRARVSENSKKISSLLLPSK 241

Query: 489  TIHKQPQQXXXXXXXXXXXXXXXXXKMVRNEAEMSRGVKLVAGLERIRTILEQETGQVAS 310
            TI    QQ                  + RNEAEM+RGVK +A LERIRT LE  TGQVAS
Sbjct: 242  TIQSGFQQPSISSAKRASNSRSRILMIARNEAEMARGVKEIAELERIRTTLEDGTGQVAS 301

Query: 309  LSSWAEAAGVDKKELQQQLHFGWYCRDELIKSSRSLVLYLARNYRGLGVAFEDLIQAGKS 130
            +S WAEAAG+D K L+Q+LHFGWYC+DEL++S+RSL++YL R YRG+GVAFEDL+QAGK 
Sbjct: 302  ISCWAEAAGLDPKVLRQRLHFGWYCQDELLRSTRSLIIYLTRYYRGVGVAFEDLLQAGKM 361

Query: 129  GVLQGAARFDHSRGYKFSTYVQYWIRKSMSTLVAQHARGIRIP 1
            GVLQGA RFDH+RG+KFSTYVQ+WIRKSMS +V + +R ++IP
Sbjct: 362  GVLQGAERFDHTRGFKFSTYVQFWIRKSMSMVVTRDSRNMQIP 404


>ref|XP_009623297.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
            tomentosiformis]
          Length = 560

 Score =  299 bits (765), Expect = 4e-78
 Identities = 174/367 (47%), Positives = 228/367 (62%), Gaps = 8/367 (2%)
 Frame = -1

Query: 1077 RGRESSHDLAKVSFPSVVSWESETSYNDLLEAQTRTSASQTLENYCLETEGMKVNVGKRS 898
            +G+E+ +D A+ S    ++ + E S++D    +T  S  Q   +    T  +K  +G+ S
Sbjct: 36   KGKEALYDPAR-SLKPFINEDCEPSHSDPFRVRTCLSDPQLWTSDTSVTTEIKTRIGRGS 94

Query: 897  HVHM----PTRENKLTC----LTSLQANEISQYRXXXXXXXXXXXMFSSSDVVRLERDII 742
              ++     + +N ++      T L       +            MF+ S+V RLERDI+
Sbjct: 95   PTNIYGDIGSPKNVISLDGEKPTYLNTTRALHFSLLMKNLDLLENMFADSEVSRLERDIM 154

Query: 741  LQLERLGALKLFHTCLSRTLKTPNFFDLSNAPTELVEEHRLNGIADDHSGKILXXXXXXX 562
            +QL++LGAL+ FHTCLSRT     F ++ + P EL+EE   +G+  +   K++       
Sbjct: 155  VQLDKLGALEFFHTCLSRTNHCSTFPEVLDVPRELIEEIEKDGLVGNGIDKVVVRSKKKQ 214

Query: 561  XXXXXXXXXXXKANCVSALALPSKTIHKQPQQXXXXXXXXXXXXXXXXXKMVRNEAEMSR 382
                        AN +  +   +K I +  QQ                 K+ +NEAEMSR
Sbjct: 215  ERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFFSGKRTHTSRNKRQKIAKNEAEMSR 274

Query: 381  GVKLVAGLERIRTILEQETGQVASLSSWAEAAGVDKKELQQQLHFGWYCRDELIKSSRSL 202
            GVKLVA LERIR+ILE+ETG+VAS SSWAEAAGV++KELQQ+LHFGWYCRDEL+KS+RSL
Sbjct: 275  GVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQQRLHFGWYCRDELLKSTRSL 334

Query: 201  VLYLARNYRGLGVAFEDLIQAGKSGVLQGAARFDHSRGYKFSTYVQYWIRKSMSTLVAQH 22
            VLYLARNYRGLGVAFEDLIQAG  GVLQGA RFD +RGYKFSTYVQYWIRKS+S LVAQH
Sbjct: 335  VLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQYWIRKSLSKLVAQH 394

Query: 21   ARGIRIP 1
            ARGIRIP
Sbjct: 395  ARGIRIP 401


>gb|KDO79965.1| hypothetical protein CISIN_1g009449mg [Citrus sinensis]
            gi|641861278|gb|KDO79966.1| hypothetical protein
            CISIN_1g009449mg [Citrus sinensis]
          Length = 381

 Score =  299 bits (765), Expect = 4e-78
 Identities = 176/392 (44%), Positives = 233/392 (59%), Gaps = 1/392 (0%)
 Frame = -1

Query: 1173 MGTGFRLNLKLAFAVHXXXXXXXXXXXXXXXFRGRESSHDLAKVSFPSVVSWESETSYND 994
            MG GFRLNLK    V                 RGRE S + A++SF S +S +S + + D
Sbjct: 1    MGMGFRLNLKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQD 60

Query: 993  LLEAQTRTSAS-QTLENYCLETEGMKVNVGKRSHVHMPTRENKLTCLTSLQANEISQYRX 817
             ++A T +  + QT+EN   ETE ++                K T      A+  S +R 
Sbjct: 61   PVKAYTCSFVNTQTVENDYSETEEIR---------------QKSTSCIGQDASSRSDFRL 105

Query: 816  XXXXXXXXXXMFSSSDVVRLERDIILQLERLGALKLFHTCLSRTLKTPNFFDLSNAPTEL 637
                       F+ SD +RLER+I+ QL +LGALKLF++ LSR +KT N  DLS+  TE 
Sbjct: 106  LMENLDVLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRIVKTSNVLDLSDVHTE- 164

Query: 636  VEEHRLNGIADDHSGKILXXXXXXXXXXXXXXXXXXKANCVSALALPSKTIHKQPQQXXX 457
              E ++N   D H GKIL                  ++   S L+LPS+ + +  +Q   
Sbjct: 165  --EQKMNDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSLPSEALQEGLKQPTI 222

Query: 456  XXXXXXXXXXXXXXKMVRNEAEMSRGVKLVAGLERIRTILEQETGQVASLSSWAEAAGVD 277
                           + RNEAEMS+GV++VA LERI+T LE+E+G+ ASL+ WA+AAGV 
Sbjct: 223  FSAERALNSRGRRLTIARNEAEMSKGVQVVANLERIKTTLEKESGKAASLNCWAQAAGVS 282

Query: 276  KKELQQQLHFGWYCRDELIKSSRSLVLYLARNYRGLGVAFEDLIQAGKSGVLQGAARFDH 97
            ++ L+Q L FGWYCR+ELIKS+R LVL+LARNYRGLG+ F DL+QAG  GVLQGA RFDH
Sbjct: 283  ERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDH 342

Query: 96   SRGYKFSTYVQYWIRKSMSTLVAQHARGIRIP 1
            +RGYKFSTYVQYWIRKS+S +VA+HARGI+IP
Sbjct: 343  TRGYKFSTYVQYWIRKSISKMVARHARGIKIP 374