BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00001351
         (1255 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010269721.1| PREDICTED: transcription initiation factor I...   221   1e-54
ref|XP_012090034.1| PREDICTED: transcription initiation factor I...   218   9e-54
ref|XP_002277679.1| PREDICTED: transcription initiation factor I...   218   1e-53
ref|XP_010941281.1| PREDICTED: transcription initiation factor I...   215   6e-53
ref|XP_010935048.1| PREDICTED: transcription initiation factor I...   215   6e-53
ref|XP_008788640.1| PREDICTED: transcription initiation factor I...   215   6e-53
ref|XP_007015120.1| Cyclin-like family protein [Theobroma cacao]...   215   6e-53
ref|XP_009409174.1| PREDICTED: transcription initiation factor I...   215   7e-53
ref|XP_009388781.1| PREDICTED: transcription initiation factor I...   213   2e-52
ref|XP_008799413.1| PREDICTED: transcription initiation factor I...   213   4e-52
ref|XP_002513521.1| transcription initiation factor iib, putativ...   213   4e-52
ref|NP_001149721.1| transcription initiation factor IIB [Zea may...   212   5e-52
gb|ACF84713.1| unknown [Zea mays]                                     212   5e-52
ref|XP_010920217.1| PREDICTED: transcription initiation factor I...   212   6e-52
ref|XP_008785330.1| PREDICTED: transcription initiation factor I...   212   6e-52
ref|XP_009409510.1| PREDICTED: transcription initiation factor I...   211   1e-51
ref|XP_006660890.1| PREDICTED: transcription initiation factor I...   210   2e-51
ref|XP_004957467.1| PREDICTED: transcription initiation factor I...   210   2e-51
ref|NP_001063775.1| Os09g0534800 [Oryza sativa Japonica Group] g...   210   2e-51
ref|XP_003578512.1| PREDICTED: transcription initiation factor I...   210   2e-51

>ref|XP_010269721.1| PREDICTED: transcription initiation factor IIB [Nelumbo nucifera]
          Length = 312

 Score =  221 bits (563), Expect = 1e-54
 Identities = 116/144 (80%), Positives = 120/144 (83%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGATKKEIGRAKE+IVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTN    
Sbjct: 169 KEICSVANGATKKEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVK 228

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  KSEELDIRRSPISVAAAVIY             DISLATGVAEGTIRNSYKDL
Sbjct: 229 AAQEAVQKSEELDIRRSPISVAAAVIYMITQLSDDKKLLRDISLATGVAEGTIRNSYKDL 288

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           YPYASRLIP+W+AKEEDLRNLCSP
Sbjct: 289 YPYASRLIPNWFAKEEDLRNLCSP 312


>ref|XP_012090034.1| PREDICTED: transcription initiation factor IIB isoform X1 [Jatropha
           curcas] gi|643705984|gb|KDP22116.1| hypothetical protein
           JCGZ_25947 [Jatropha curcas]
          Length = 312

 Score =  218 bits (555), Expect = 9e-54
 Identities = 112/144 (77%), Positives = 119/144 (82%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGATKKEIGRAKE+IVKQLEVE+GQSMEMGTIHAGDFLRRFCSHLGM N    
Sbjct: 169 KEICSVANGATKKEIGRAKEYIVKQLEVELGQSMEMGTIHAGDFLRRFCSHLGMNNQAVK 228

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  KSEELDIRRSPIS+AAA+IY             DISLATGVAEGTIRNSYKDL
Sbjct: 229 AAQESVQKSEELDIRRSPISIAAAIIYMITQLSDDKKLLKDISLATGVAEGTIRNSYKDL 288

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           YPYASR+IPSWYAKE+DLRNLCSP
Sbjct: 289 YPYASRIIPSWYAKEDDLRNLCSP 312


>ref|XP_002277679.1| PREDICTED: transcription initiation factor IIB [Vitis vinifera]
           gi|297734946|emb|CBI17180.3| unnamed protein product
           [Vitis vinifera]
          Length = 314

 Score =  218 bits (554), Expect = 1e-53
 Identities = 116/144 (80%), Positives = 119/144 (82%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGATKKEIGRAKE+IVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTN    
Sbjct: 171 KEICSVANGATKKEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVK 230

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  KSEELDIRRSPISVAAAVIY             DISLATGVAEGTIRNSYKDL
Sbjct: 231 AAQEAVQKSEELDIRRSPISVAAAVIYMITQLSDDKKLLKDISLATGVAEGTIRNSYKDL 290

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           YPYASR+IPS YAKEEDLRNLCSP
Sbjct: 291 YPYASRIIPSSYAKEEDLRNLCSP 314


>ref|XP_010941281.1| PREDICTED: transcription initiation factor IIB-like [Elaeis
           guineensis]
          Length = 312

 Score =  215 bits (548), Expect = 6e-53
 Identities = 114/144 (79%), Positives = 119/144 (82%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTN    
Sbjct: 169 KEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNHAVK 228

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  KSEELDIRRSPIS+AAAVIY             DISLATGVAEGTIRNSYKDL
Sbjct: 229 AAQEAVQKSEELDIRRSPISIAAAVIYMITQLSDDKKHLKDISLATGVAEGTIRNSYKDL 288

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           YPYASRLIP+ +AKEEDL+NLCSP
Sbjct: 289 YPYASRLIPTSFAKEEDLKNLCSP 312


>ref|XP_010935048.1| PREDICTED: transcription initiation factor IIB-like [Elaeis
           guineensis]
          Length = 312

 Score =  215 bits (548), Expect = 6e-53
 Identities = 114/144 (79%), Positives = 119/144 (82%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTN    
Sbjct: 169 KEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVK 228

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  KSEELDIRRSPIS+AAAVIY             DISLATGVAEGTIRNSYKDL
Sbjct: 229 AAQEAVQKSEELDIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDL 288

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           YPYASRLIP+ +AKEEDL+NLCSP
Sbjct: 289 YPYASRLIPTSFAKEEDLKNLCSP 312


>ref|XP_008788640.1| PREDICTED: transcription initiation factor IIB-like [Phoenix
           dactylifera]
          Length = 312

 Score =  215 bits (548), Expect = 6e-53
 Identities = 114/144 (79%), Positives = 119/144 (82%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTN    
Sbjct: 169 KEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVK 228

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  KSEELDIRRSPIS+AAAVIY             DISLATGVAEGTIRNSYKDL
Sbjct: 229 AAQEAVQKSEELDIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDL 288

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           YPYASRLIP+ +AKEEDL+NLCSP
Sbjct: 289 YPYASRLIPTSFAKEEDLKNLCSP 312


>ref|XP_007015120.1| Cyclin-like family protein [Theobroma cacao]
           gi|508785483|gb|EOY32739.1| Cyclin-like family protein
           [Theobroma cacao]
          Length = 312

 Score =  215 bits (548), Expect = 6e-53
 Identities = 111/144 (77%), Positives = 120/144 (83%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGATKKEIGRAKE+IVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGM+N    
Sbjct: 169 KEICSVANGATKKEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMSNQTVK 228

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  KSEELDIRRSPIS+AAAVIY             DISLATGVAEGTIRNSYKDL
Sbjct: 229 AAQEAVQKSEELDIRRSPISIAAAVIYIITQLSDDKKLLKDISLATGVAEGTIRNSYKDL 288

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           +P+AS+L+PSWYAKEEDL+NLCSP
Sbjct: 289 HPHASKLVPSWYAKEEDLKNLCSP 312


>ref|XP_009409174.1| PREDICTED: transcription initiation factor IIB-like [Musa acuminata
           subsp. malaccensis]
          Length = 312

 Score =  215 bits (547), Expect = 7e-53
 Identities = 112/144 (77%), Positives = 120/144 (83%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTN    
Sbjct: 169 KEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVK 228

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  KSEELDIRRSPIS+AAAVIY             DISLATGVAEGTI+NSYKDL
Sbjct: 229 AAQEAVQKSEELDIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIKNSYKDL 288

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           YPYASR+IP+++AKEEDL+NLCSP
Sbjct: 289 YPYASRIIPTFFAKEEDLKNLCSP 312


>ref|XP_009388781.1| PREDICTED: transcription initiation factor IIB-like [Musa acuminata
           subsp. malaccensis]
          Length = 312

 Score =  213 bits (543), Expect = 2e-52
 Identities = 110/144 (76%), Positives = 120/144 (83%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGATKKEIGRAKEFIVKQLE+EMGQSMEMGTIHAGDFLRRFCSHLGMTN    
Sbjct: 169 KEICSVANGATKKEIGRAKEFIVKQLEIEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVK 228

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  KSEELDIRRSPIS+AAAVIY             DISLATGVAEGTI+NSYKDL
Sbjct: 229 AAQEAVQKSEELDIRRSPISIAAAVIYMITQLSDDKKPVKDISLATGVAEGTIKNSYKDL 288

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           YPYASR+IP++++KEEDL+NLCSP
Sbjct: 289 YPYASRIIPTFFSKEEDLKNLCSP 312


>ref|XP_008799413.1| PREDICTED: transcription initiation factor IIB-like [Phoenix
           dactylifera]
          Length = 312

 Score =  213 bits (541), Expect = 4e-52
 Identities = 112/144 (77%), Positives = 119/144 (82%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGATKKEIGRAKEFIVKQLEVEMG+SMEMGTIHAGDFLRRFCSHLGMTN    
Sbjct: 169 KEICSVANGATKKEIGRAKEFIVKQLEVEMGRSMEMGTIHAGDFLRRFCSHLGMTNHAVK 228

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  KSEELDIRRSPIS+AAAVIY             DISLATGVAEGTIRNSYKDL
Sbjct: 229 AAQEAVQKSEELDIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDL 288

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           YPYASRLIP+ +AKE+DL+NLCSP
Sbjct: 289 YPYASRLIPTSFAKEQDLKNLCSP 312


>ref|XP_002513521.1| transcription initiation factor iib, putative [Ricinus communis]
           gi|223547429|gb|EEF48924.1| transcription initiation
           factor iib, putative [Ricinus communis]
          Length = 312

 Score =  213 bits (541), Expect = 4e-52
 Identities = 109/144 (75%), Positives = 117/144 (81%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGATKKEIGRAKE+IVKQLEVE+GQSMEMGTIHAGDFLRRFCSHLGM N    
Sbjct: 169 KEICSVANGATKKEIGRAKEYIVKQLEVELGQSMEMGTIHAGDFLRRFCSHLGMNNQAVK 228

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  KSEELDIRRSPIS+AAA+IY             DIS +TGVAEGTIRNSYKDL
Sbjct: 229 AAQEAVKKSEELDIRRSPISIAAAIIYMITQLSEEKKLLKDISTSTGVAEGTIRNSYKDL 288

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           YPYASR++PSWYAKEEDL NLCSP
Sbjct: 289 YPYASRIVPSWYAKEEDLINLCSP 312


>ref|NP_001149721.1| transcription initiation factor IIB [Zea mays]
           gi|195629762|gb|ACG36522.1| transcription initiation
           factor IIB [Zea mays] gi|414590059|tpg|DAA40630.1| TPA:
           transcription initiation factor IIB [Zea mays]
          Length = 312

 Score =  212 bits (540), Expect = 5e-52
 Identities = 112/144 (77%), Positives = 118/144 (81%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCS LGMTN    
Sbjct: 169 KEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMTNQAVN 228

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  +SEELDIRRSPIS+AAAVIY             DISLATGVAEGTIRNSYKDL
Sbjct: 229 AAKEAVQRSEELDIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDL 288

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           YPYASRLIP+ YAKEEDL+NLC+P
Sbjct: 289 YPYASRLIPNTYAKEEDLKNLCTP 312


>gb|ACF84713.1| unknown [Zea mays]
          Length = 198

 Score =  212 bits (540), Expect = 5e-52
 Identities = 112/144 (77%), Positives = 118/144 (81%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCS LGMTN    
Sbjct: 55  KEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMTNQAVN 114

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  +SEELDIRRSPIS+AAAVIY             DISLATGVAEGTIRNSYKDL
Sbjct: 115 AAKEAVQRSEELDIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDL 174

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           YPYASRLIP+ YAKEEDL+NLC+P
Sbjct: 175 YPYASRLIPNTYAKEEDLKNLCTP 198


>ref|XP_010920217.1| PREDICTED: transcription initiation factor IIB [Elaeis guineensis]
          Length = 312

 Score =  212 bits (539), Expect = 6e-52
 Identities = 111/144 (77%), Positives = 119/144 (82%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGATKKEIGRAKE+IVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGM+N    
Sbjct: 169 KEICSVANGATKKEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMSNQAVK 228

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  KSEELDIRRSPIS+AAAVIY             DISLATGVAEGTIRNSYKDL
Sbjct: 229 AAQEAVQKSEELDIRRSPISIAAAVIYMITQLSEAKKPLRDISLATGVAEGTIRNSYKDL 288

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           YPYASR+IP+ +AKEEDL+NLCSP
Sbjct: 289 YPYASRIIPASFAKEEDLKNLCSP 312


>ref|XP_008785330.1| PREDICTED: transcription initiation factor IIB, partial [Phoenix
           dactylifera]
          Length = 294

 Score =  212 bits (539), Expect = 6e-52
 Identities = 111/144 (77%), Positives = 119/144 (82%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGATKKEIGRAKE+IVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGM+N    
Sbjct: 151 KEICSVANGATKKEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMSNQAVK 210

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  KSEELDIRRSPIS+AAAVIY             DISLATGVAEGTIRNSYKDL
Sbjct: 211 AAQEAVQKSEELDIRRSPISIAAAVIYMITQLSEEKKPLRDISLATGVAEGTIRNSYKDL 270

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           YPYASR+IP+ +AKEEDL+NLCSP
Sbjct: 271 YPYASRIIPASFAKEEDLKNLCSP 294


>ref|XP_009409510.1| PREDICTED: transcription initiation factor IIB [Musa acuminata
           subsp. malaccensis]
          Length = 312

 Score =  211 bits (537), Expect = 1e-51
 Identities = 110/144 (76%), Positives = 118/144 (81%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGA KKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTN    
Sbjct: 169 KEICSVANGAAKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVK 228

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  KSEELDIRRSPIS+AAA+IY             DISLATGVAEGTIRNSYKDL
Sbjct: 229 AAQEAVQKSEELDIRRSPISIAAAIIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDL 288

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           YPY+SR+IP+ +AKEEDL+NLCSP
Sbjct: 289 YPYSSRIIPTSFAKEEDLKNLCSP 312


>ref|XP_006660890.1| PREDICTED: transcription initiation factor IIB-like [Oryza
           brachyantha]
          Length = 312

 Score =  210 bits (535), Expect = 2e-51
 Identities = 111/144 (77%), Positives = 117/144 (81%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCS LGM N    
Sbjct: 169 KEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVK 228

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  +SEELDIRRSPIS+AAAVIY             DISLATGVAEGTIRNSYKDL
Sbjct: 229 AAQEAVQRSEELDIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDL 288

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           YPYASRLIP+ YAKEEDL+NLC+P
Sbjct: 289 YPYASRLIPNTYAKEEDLKNLCTP 312


>ref|XP_004957467.1| PREDICTED: transcription initiation factor IIB [Setaria italica]
           gi|944261208|gb|KQL25465.1| hypothetical protein
           SETIT_030598mg [Setaria italica]
          Length = 312

 Score =  210 bits (535), Expect = 2e-51
 Identities = 111/144 (77%), Positives = 117/144 (81%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCS LGM N    
Sbjct: 169 KEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVK 228

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  +SEELDIRRSPIS+AAAVIY             DISLATGVAEGTIRNSYKDL
Sbjct: 229 AAQEAVQRSEELDIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDL 288

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           YPYASRLIP+ YAKEEDL+NLC+P
Sbjct: 289 YPYASRLIPNTYAKEEDLKNLCTP 312


>ref|NP_001063775.1| Os09g0534800 [Oryza sativa Japonica Group]
           gi|21362998|sp|Q8W0W3.1|TF2B_ORYSJ RecName:
           Full=Transcription initiation factor IIB; AltName:
           Full=General transcription factor TFIIB
           gi|18481632|gb|AAL73491.1|AF464908_1 general
           transcription factor TFIIB [Oryza sativa]
           gi|50725809|dbj|BAD33339.1| Transcription initiation
           factor IIB [Oryza sativa Japonica Group]
           gi|50726577|dbj|BAD34211.1| Transcription initiation
           factor IIB [Oryza sativa Japonica Group]
           gi|113632008|dbj|BAF25689.1| Os09g0534800 [Oryza sativa
           Japonica Group] gi|125564497|gb|EAZ09877.1| hypothetical
           protein OsI_32170 [Oryza sativa Indica Group]
           gi|125606444|gb|EAZ45480.1| hypothetical protein
           OsJ_30135 [Oryza sativa Japonica Group]
           gi|347737122|gb|AEP20532.1| transcription factor [Oryza
           sativa Japonica Group] gi|937934221|dbj|BAT09136.1|
           Os09g0534800 [Oryza sativa Japonica Group]
          Length = 312

 Score =  210 bits (535), Expect = 2e-51
 Identities = 111/144 (77%), Positives = 117/144 (81%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCS LGM N    
Sbjct: 169 KEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVK 228

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  +SEELDIRRSPIS+AAAVIY             DISLATGVAEGTIRNSYKDL
Sbjct: 229 AAQEAVQRSEELDIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDL 288

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           YPYASRLIP+ YAKEEDL+NLC+P
Sbjct: 289 YPYASRLIPNTYAKEEDLKNLCTP 312


>ref|XP_003578512.1| PREDICTED: transcription initiation factor IIB [Brachypodium
           distachyon] gi|944055574|gb|KQJ91212.1| hypothetical
           protein BRADI_4g36290 [Brachypodium distachyon]
          Length = 312

 Score =  210 bits (535), Expect = 2e-51
 Identities = 111/144 (77%), Positives = 117/144 (81%), Gaps = 4/144 (2%)
 Frame = -3

Query: 725 KEICSIANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXX 546
           KEICS+ANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCS LGM N    
Sbjct: 169 KEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNTAVK 228

Query: 545 XXXXXXXKSEELDIRRSPISVAAAVIY----XXXXXXXXXDISLATGVAEGTIRNSYKDL 378
                  +SEELDIRRSPIS+AAAVIY             DISLATGVAEGTIRNSYKDL
Sbjct: 229 AAQEAVQRSEELDIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDL 288

Query: 377 YPYASRLIPSWYAKEEDLRNLCSP 306
           YPYASRLIP+ YAKEEDL+NLC+P
Sbjct: 289 YPYASRLIPNTYAKEEDLKNLCTP 312