BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00001306
         (941 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF16408.1| chloroplast ribulose 1,5-bisphosphate carboxylase...   233   1e-58
ref|XP_005648578.1| chloroplast ribulose 1,5-bisphosphate carbox...   233   2e-58
gb|ACU32662.1| chloroplast ribulose-1,5-bisphosphate carboxylase...   217   1e-53
ref|XP_005852247.1| hypothetical protein CHLNCDRAFT_29368 [Chlor...   214   6e-53
ref|XP_005851923.1| hypothetical protein CHLNCDRAFT_59545 [Chlor...   214   6e-53
gb|ACU32661.1| chloroplast ribulose-1,5-bisphosphate carboxylase...   212   3e-52
ref|XP_011395737.1| Ribulose bisphosphate carboxylase small chai...   211   5e-52
ref|WP_051016923.1| hypothetical protein, partial [Nocardia cyri...   209   2e-51
sp|P16137.1|RBS4_ACEAT RecName: Full=Ribulose bisphosphate carbo...   207   1e-50
dbj|BAD42334.1| ribulose-1,5-bisphosphate carboxyase/oxygenase s...   207   1e-50
dbj|BAM68686.1| ribulose 1,5-bisphosphate carboxlase/oxygenase s...   207   1e-50
dbj|BAD42333.1| ribulose-1,5-bisphosphate carboxyase/oxygenase s...   206   2e-50
sp|P16134.1|RBS1_ACEAT RecName: Full=Ribulose bisphosphate carbo...   206   3e-50
sp|P16135.1|RBS2_ACEAT RecName: Full=Ribulose bisphosphate carbo...   206   3e-50
sp|P16138.1|RBS5_ACEAT RecName: Full=Ribulose bisphosphate carbo...   206   3e-50
gb|AAU93597.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   206   3e-50
sp|Q38692.1|RBS6_ACEPE RecName: Full=Ribulose bisphosphate carbo...   205   4e-50
sp|P16136.1|RBS3_ACEAT RecName: Full=Ribulose bisphosphate carbo...   205   5e-50
sp|P16132.1|RBS4_ACEPE RecName: Full=Ribulose bisphosphate carbo...   204   8e-50
sp|P26985.2|RBS_BATOE RecName: Full=Ribulose bisphosphate carbox...   204   8e-50

>gb|ACF16408.1| chloroplast ribulose 1,5-bisphosphate carboxylase/oxygenase small
           subunit [Lobosphaera incisa] gi|657202139|gb|AID50176.1|
           chloroplast ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit [Lobosphaera incisa]
          Length = 189

 Score =  233 bits (595), Expect = 1e-58
 Identities = 114/172 (66%), Positives = 131/172 (76%)
 Frame = -2

Query: 793 PAFSGLARVPLQKAERNTFAARTVSNGIKTRQMMVWQPTDNKYFETLSFLPPLSQDEIAR 614
           PA S  A  P + A   TFA +TVSNGIKTRQMMVWQPT+N+YFETLSFLPPL+ D+IA+
Sbjct: 21  PARSLKALAPARAA---TFAQKTVSNGIKTRQMMVWQPTNNRYFETLSFLPPLTDDQIAK 77

Query: 613 QVDYVTRNGWTPCLEFADVEFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQ 434
           QVDY+  NGW PCLEF++   AYV+S N  R G V   Y DNRYWTM+KLPMFGCTD  Q
Sbjct: 78  QVDYMINNGWVPCLEFSEANMAYVASDNCIRYGNVASGYQDNRYWTMFKLPMFGCTDPGQ 137

Query: 433 VLGEVQNASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 278
           VL E+ NA K FP+AYIRLVAFD   Q QVAGFLVHRP SA DF+ P +RS+
Sbjct: 138 VLTEIANAEKCFPDAYIRLVAFDNVTQTQVAGFLVHRPASANDFRKPSERSI 189


>ref|XP_005648578.1| chloroplast ribulose 1,5-bisphosphate carboxylase/oxygenase small
           subunit [Coccomyxa subellipsoidea C-169]
           gi|384250555|gb|EIE24034.1| chloroplast ribulose
           1,5-bisphosphate carboxylase/oxygenase small subunit
           [Coccomyxa subellipsoidea C-169]
          Length = 195

 Score =  233 bits (594), Expect = 2e-58
 Identities = 110/180 (61%), Positives = 133/180 (73%), Gaps = 2/180 (1%)
 Frame = -2

Query: 814 VKCQAPRPAFSGLARVPLQKAERNTFAARTVSNGIKTRQMMVWQPTDNKYFETLSFLPPL 635
           V  +  +  FSGLARV L      TFA RTVSNG +TRQM+VW+P DNK+FET S+LPPL
Sbjct: 15  VAAKPSKAGFSGLARVALPAKAVPTFAQRTVSNGCRTRQMLVWEPVDNKFFETFSYLPPL 74

Query: 634 SQDEIARQVDYVTRNGWTPCLEFADVEFAYVSSKNTNRL--GPVTCNYFDNRYWTMYKLP 461
           + D+IA+QVDY+ R GWTP LEF++ E AYV      R   G  +CNY+DNRYW MYKLP
Sbjct: 75  TDDQIAKQVDYIIRQGWTPALEFSNAESAYVKDVANIRFTGGSASCNYYDNRYWAMYKLP 134

Query: 460 MFGCTDASQVLGEVQNASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRS 281
           MFGCTDASQVL E+ NA KTFP++Y+R+ AFDA RQVQ    LVHRP SATD++ P+ RS
Sbjct: 135 MFGCTDASQVLAEIANAVKTFPDSYVRMAAFDAVRQVQTVAILVHRPASATDYRLPENRS 194


>gb|ACU32662.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Chlorella pyrenoidosa]
          Length = 184

 Score =  217 bits (552), Expect = 1e-53
 Identities = 108/178 (60%), Positives = 131/178 (73%), Gaps = 9/178 (5%)
 Frame = -2

Query: 784 SGLARVPLQKAERN-------TFAARTVSNGI--KTRQMMVWQPTDNKYFETLSFLPPLS 632
           + L + P+   +R+       TF A TVSNG   KT  MMVW P +NK+FET S+LPPLS
Sbjct: 7   ASLVKAPVATTQRSVLKPAGKTFKAVTVSNGNVQKTSAMMVWTPVNNKFFETFSYLPPLS 66

Query: 631 QDEIARQVDYVTRNGWTPCLEFADVEFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFG 452
            D+IARQVDY+  NGWTPCLEFAD + AYVS+ +  R G V+  Y DNRYWTM+KLPMFG
Sbjct: 67  GDQIARQVDYIVLNGWTPCLEFADPDCAYVSNDSCVRFGNVSVGYQDNRYWTMWKLPMFG 126

Query: 451 CTDASQVLGEVQNASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 278
           CTD SQVL E+ N  + FP+AYIRLVAFDA RQVQ+ GFLVHRP SAT+ + P++RSV
Sbjct: 127 CTDPSQVLKEISNCERAFPDAYIRLVAFDAIRQVQITGFLVHRPMSATEHRRPNERSV 184


>ref|XP_005852247.1| hypothetical protein CHLNCDRAFT_29368 [Chlorella variabilis]
           gi|307111911|gb|EFN60145.1| hypothetical protein
           CHLNCDRAFT_29368 [Chlorella variabilis]
          Length = 184

 Score =  214 bits (546), Expect = 6e-53
 Identities = 108/170 (63%), Positives = 126/170 (74%), Gaps = 3/170 (1%)
 Frame = -2

Query: 778 LARVPLQKAERNTFAARTVSNGI--KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVD 605
           +A  PL++A +NTFAARTVSNG   K   M VW P +NK FET SFLPPL+  EI+RQVD
Sbjct: 16  MASTPLKQA-KNTFAARTVSNGSIKKVSAMQVWTPLNNKMFETFSFLPPLTDGEISRQVD 74

Query: 604 YVTRNGWTPCLEFADVEFAYVSSKNTNRL-GPVTCNYFDNRYWTMYKLPMFGCTDASQVL 428
           Y+ RNGWTPCLEFAD + AYV   +T RL G     Y+DNRYW M+KLPMFGCTD  QVL
Sbjct: 75  YIVRNGWTPCLEFADADHAYVDDTSTIRLRGNAVPLYYDNRYWCMWKLPMFGCTDGQQVL 134

Query: 427 GEVQNASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 278
            E+QN  + FP+AYIRLV FD+ RQVQVAG LV+RP S  D+QSP  RSV
Sbjct: 135 REIQNCRRAFPDAYIRLVGFDSVRQVQVAGLLVNRPASVRDYQSPSTRSV 184


>ref|XP_005851923.1| hypothetical protein CHLNCDRAFT_59545 [Chlorella variabilis]
           gi|307111587|gb|EFN59821.1| hypothetical protein
           CHLNCDRAFT_59545 [Chlorella variabilis]
          Length = 184

 Score =  214 bits (546), Expect = 6e-53
 Identities = 108/170 (63%), Positives = 126/170 (74%), Gaps = 3/170 (1%)
 Frame = -2

Query: 778 LARVPLQKAERNTFAARTVSNGI--KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVD 605
           +A  PL++A +NTFAARTVSNG   K   M VW P +NK FET SFLPPL+  EI+RQVD
Sbjct: 16  MASTPLKQA-KNTFAARTVSNGSIKKVSAMQVWTPLNNKMFETFSFLPPLTDGEISRQVD 74

Query: 604 YVTRNGWTPCLEFADVEFAYVSSKNTNRL-GPVTCNYFDNRYWTMYKLPMFGCTDASQVL 428
           Y+ RNGWTPCLEFAD + AYV   +T RL G     Y+DNRYW M+KLPMFGCTD  QVL
Sbjct: 75  YIVRNGWTPCLEFADADHAYVDDTSTIRLRGNAVPLYYDNRYWCMWKLPMFGCTDGQQVL 134

Query: 427 GEVQNASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 278
            E+QN  + FP+AYIRLV FD+ RQVQVAG LV+RP S  D+QSP  RSV
Sbjct: 135 REIQNCRRAFPDAYIRLVGFDSVRQVQVAGLLVNRPASVRDYQSPSTRSV 184


>gb|ACU32661.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Chlorella pyrenoidosa]
          Length = 181

 Score =  212 bits (540), Expect = 3e-52
 Identities = 102/162 (62%), Positives = 120/162 (74%), Gaps = 2/162 (1%)
 Frame = -2

Query: 757 KAERNTFAARTVSNGI--KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTRNGW 584
           K  +NT AARTVSNG   KT  M VW P +NK FET S+LPPL+  EI+RQVDY+  NGW
Sbjct: 20  KQAKNTSAARTVSNGSIQKTTAMQVWTPINNKMFETFSYLPPLTDAEISRQVDYIVNNGW 79

Query: 583 TPCLEFADVEFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQNASK 404
           TPCLEFA+   AY S++N  R+   TC Y+DNRYWTM+KLPMFGCTD  QVL EV N  +
Sbjct: 80  TPCLEFAESASAYASNENCIRMNNTTCLYYDNRYWTMWKLPMFGCTDGHQVLQEVANCRR 139

Query: 403 TFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 278
            FP+AYIR+V FD  RQVQVAGFLV+RP +A D+Q P  RSV
Sbjct: 140 AFPDAYIRMVGFDPIRQVQVAGFLVNRPSTARDYQKPSTRSV 181


>ref|XP_011395737.1| Ribulose bisphosphate carboxylase small chain 7, chloroplastic
           [Auxenochlorella protothecoides]
           gi|675350431|gb|KFM22871.1| Ribulose bisphosphate
           carboxylase small chain 7, chloroplastic
           [Auxenochlorella protothecoides]
          Length = 203

 Score =  211 bits (538), Expect = 5e-52
 Identities = 102/151 (67%), Positives = 115/151 (76%), Gaps = 2/151 (1%)
 Frame = -2

Query: 724 VSNGI--KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFADVEF 551
           VSNG   +T  M+VW PT+NK FET SFLPPLS D+I+RQVDY+  N W PCLEF D  F
Sbjct: 53  VSNGNIKRTTAMLVWTPTNNKMFETFSFLPPLSDDQISRQVDYIISNKWIPCLEFIDDPF 112

Query: 550 AYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQNASKTFPNAYIRLVA 371
            YV+ +NT R+G V  NY+DNRYWTM+KLPMFGC D SQVL EV N  K FP+AYIRLVA
Sbjct: 113 PYVAQENTIRMGAVASNYYDNRYWTMWKLPMFGCNDGSQVLTEVGNCRKAFPDAYIRLVA 172

Query: 370 FDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 278
           FD  RQVQ+ GFLVHRP SA DFQ  DKRSV
Sbjct: 173 FDNVRQVQIGGFLVHRPPSANDFQPTDKRSV 203


>ref|WP_051016923.1| hypothetical protein, partial [Nocardia cyriacigeorgica]
          Length = 199

 Score =  209 bits (533), Expect = 2e-51
 Identities = 99/163 (60%), Positives = 120/163 (73%), Gaps = 1/163 (0%)
 Frame = -2

Query: 814 VKCQAPRPAFSGLARVPLQKAERNTFAARTVSNGIKTRQMMVWQPTDNKYFETLSFLPPL 635
           V  +  +  FSGLARV L      TFA RTVSNG +TRQM+VW+PTDNK+FET S+LPPL
Sbjct: 15  VATKPSKAGFSGLARVALPSKAVPTFAQRTVSNGCRTRQMLVWEPTDNKFFETFSYLPPL 74

Query: 634 SQDEIARQVDYVTRNGWTPCLEFADVEFAYVSS-KNTNRLGPVTCNYFDNRYWTMYKLPM 458
           + D+IA+QVDY+ R GWTPCLEF+  E AYV    N    G   C Y+DNRYW MYKLPM
Sbjct: 75  TDDQIAKQVDYIIRQGWTPCLEFSRPEGAYVKDIANIRYGGSANCGYYDNRYWAMYKLPM 134

Query: 457 FGCTDASQVLGEVQNASKTFPNAYIRLVAFDAKRQVQVAGFLV 329
           FGCTDASQVL E+ NA+K+FP++Y+R+ AFDA RQVQ    +V
Sbjct: 135 FGCTDASQVLAEIANATKSFPDSYVRMAAFDAVRQVQTVAAVV 177


>sp|P16137.1|RBS4_ACEAT RecName: Full=Ribulose bisphosphate carboxylase small chain 4,
           chloroplastic; Short=RuBisCO small subunit 4; Flags:
           Precursor gi|732554|emb|CAA36111.1| ribulose
           bisphosphate carboxylase, small subunit precursor
           [Acetabularia acetabulum]
          Length = 182

 Score =  207 bits (527), Expect = 1e-50
 Identities = 99/166 (59%), Positives = 123/166 (74%)
 Frame = -2

Query: 775 ARVPLQKAERNTFAARTVSNGIKTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVT 596
           A  P     + +FA+ TV+N  K R+MMVWQP +NK FET SFLPPL+ ++I++QVDY+ 
Sbjct: 20  AATPKVVTSKRSFAS-TVAN--KNREMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYIL 76

Query: 595 RNGWTPCLEFADVEFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQ 416
            N WTPCLEFA  + AY  ++N  R+GPV   Y DNRYWTM+KLPMFGCTD SQVL E+Q
Sbjct: 77  ANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQ 136

Query: 415 NASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 278
             +  FP+AYIRLV FDA RQVQ++GFLVHRP SATD++ P  R V
Sbjct: 137 ACTNAFPDAYIRLVCFDANRQVQISGFLVHRPPSATDYRLPADRQV 182


>dbj|BAD42334.1| ribulose-1,5-bisphosphate carboxyase/oxygenase small subunit
           [Nannochloris bacillaris]
          Length = 182

 Score =  207 bits (527), Expect = 1e-50
 Identities = 102/167 (61%), Positives = 119/167 (71%), Gaps = 4/167 (2%)
 Frame = -2

Query: 766 PLQKAERNTFAART--VSNGI--KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYV 599
           P+ K    +  ART  VSNG   KT  M+VW P +NK+FET SFLPPLS  EI +QVDY+
Sbjct: 16  PITKVNATSTKARTAFVSNGTVKKTTAMLVWTPINNKFFETFSFLPPLSDSEITKQVDYI 75

Query: 598 TRNGWTPCLEFADVEFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEV 419
            RNGWTPCLEF+D E AY+   NT RL   +  Y DNRYW+M+KLPMFGCTD SQVL E+
Sbjct: 76  VRNGWTPCLEFSDPEGAYIGDTNTVRLQGTSAGYQDNRYWSMWKLPMFGCTDGSQVLKEI 135

Query: 418 QNASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 278
              +K FP AYIRLVAFD ++QVQ  GFLVHRP  A +FQ  DKRSV
Sbjct: 136 AGCTKAFPGAYIRLVAFDNQKQVQCTGFLVHRPVGAKEFQPADKRSV 182


>dbj|BAM68686.1| ribulose 1,5-bisphosphate carboxlase/oxygenase small subunit
           [Botryococcus braunii] gi|426206142|dbj|BAM68687.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Botryococcus braunii]
          Length = 190

 Score =  207 bits (526), Expect = 1e-50
 Identities = 98/167 (58%), Positives = 122/167 (73%)
 Frame = -2

Query: 778 LARVPLQKAERNTFAARTVSNGIKTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYV 599
           +AR  +     N +A +TVSNGIKT  MMVW PT+NK+FET S+LPPLS  EIA+QV+Y+
Sbjct: 24  VARPAILAPAVNQWAKKTVSNGIKTSAMMVWTPTNNKFFETFSYLPPLSDAEIAKQVEYI 83

Query: 598 TRNGWTPCLEFADVEFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEV 419
             NG+  CLEFA+ + AYV  K+  R+  V   Y+DNRYWTM+KLPMFGCTD  QVL E+
Sbjct: 84  VNNGYIACLEFAESDLAYVGDKSMIRMNNVAPCYYDNRYWTMWKLPMFGCTDPDQVLREI 143

Query: 418 QNASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 278
              +K FP+A+IRLVAFD KRQVQ+ G LVHRP +A D+Q P  RSV
Sbjct: 144 MLCTKAFPDAFIRLVAFDNKRQVQIGGMLVHRPPTARDYQKPQNRSV 190


>dbj|BAD42333.1| ribulose-1,5-bisphosphate carboxyase/oxygenase small subunit
           [Nannochloris bacillaris]
          Length = 182

 Score =  206 bits (525), Expect = 2e-50
 Identities = 102/167 (61%), Positives = 119/167 (71%), Gaps = 4/167 (2%)
 Frame = -2

Query: 766 PLQKAERNTFAART--VSNGI--KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYV 599
           P+ K    +  ART  VSNG   KT  M+VW P +NK+FET SFLPPLS  EI +QVDY+
Sbjct: 16  PITKVNAASTKARTAFVSNGTVKKTTAMLVWTPINNKFFETFSFLPPLSDSEITKQVDYI 75

Query: 598 TRNGWTPCLEFADVEFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEV 419
            RNGWTPCLEF+D E AY+   NT RL   +  Y DNRYW+M+KLPMFGCTD SQVL E+
Sbjct: 76  VRNGWTPCLEFSDPEGAYIGDTNTVRLQGTSAGYQDNRYWSMWKLPMFGCTDGSQVLKEI 135

Query: 418 QNASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 278
              +K FP AYIRLVAFD ++QVQ  GFLVHRP  A +FQ  DKRSV
Sbjct: 136 AGCTKAFPGAYIRLVAFDNQKQVQCTGFLVHRPVGAKEFQPADKRSV 182


>sp|P16134.1|RBS1_ACEAT RecName: Full=Ribulose bisphosphate carboxylase small chain 1,
           chloroplastic; Short=RuBisCO small subunit 1; Flags:
           Precursor gi|732551|emb|CAA36108.1| ribulose
           bisphosphate carboxylase, small subunit precursor
           [Acetabularia acetabulum]
          Length = 182

 Score =  206 bits (523), Expect = 3e-50
 Identities = 93/144 (64%), Positives = 113/144 (78%)
 Frame = -2

Query: 709 KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFADVEFAYVSSKN 530
           K R+MMVWQP +NK FET SFLPPL+ ++I++QVDY+  N WTPCLEFA  + AY  ++N
Sbjct: 39  KNREMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNEN 98

Query: 529 TNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQNASKTFPNAYIRLVAFDAKRQV 350
             R+GPV   Y DNRYWTM+KLPMFGCTD SQVL E+Q  +K FP+AYIRLV FDA RQV
Sbjct: 99  CIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQV 158

Query: 349 QVAGFLVHRPDSATDFQSPDKRSV 278
           Q++GFLVHRP SATD++ P  R V
Sbjct: 159 QISGFLVHRPPSATDYRLPADRQV 182


>sp|P16135.1|RBS2_ACEAT RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
           chloroplastic; Short=RuBisCO small subunit 2; Flags:
           Precursor gi|732552|emb|CAA36109.1| ribulose
           bisphosphate carboxylase, small subunit precursor
           [Acetabularia acetabulum]
          Length = 173

 Score =  206 bits (523), Expect = 3e-50
 Identities = 93/144 (64%), Positives = 113/144 (78%)
 Frame = -2

Query: 709 KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFADVEFAYVSSKN 530
           K R+MMVWQP +NK FET SFLPPL+ ++I++QVDY+  N WTPCLEFA  + AY  ++N
Sbjct: 30  KNREMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNEN 89

Query: 529 TNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQNASKTFPNAYIRLVAFDAKRQV 350
             R+GPV   Y DNRYWTM+KLPMFGCTD SQVL E+Q  +K FP+AYIRLV FDA RQV
Sbjct: 90  CIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQV 149

Query: 349 QVAGFLVHRPDSATDFQSPDKRSV 278
           Q++GFLVHRP SATD++ P  R V
Sbjct: 150 QISGFLVHRPPSATDYRLPADRQV 173


>sp|P16138.1|RBS5_ACEAT RecName: Full=Ribulose bisphosphate carboxylase small chain 5,
           chloroplastic; Short=RuBisCO small subunit 5; Flags:
           Precursor gi|732555|emb|CAA36112.1| ribulose
           bisphosphate carboxylase, small subunit precursor
           [Acetabularia acetabulum]
          Length = 183

 Score =  206 bits (523), Expect = 3e-50
 Identities = 98/166 (59%), Positives = 119/166 (71%)
 Frame = -2

Query: 775 ARVPLQKAERNTFAARTVSNGIKTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVT 596
           A VP     +  FA  +  N  K R MMVWQP +NK FET SFLPPL+ ++I++QVDY+ 
Sbjct: 20  AAVPKVVMSKGGFARTSAVN--KNRDMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYIL 77

Query: 595 RNGWTPCLEFADVEFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQ 416
            N WTPCLEFA  + AY  ++N  R+GPV   Y DNRYWTM+KLPMFGCTD SQVL E+Q
Sbjct: 78  ANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQ 137

Query: 415 NASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 278
             +  FP+AYIRLV FDA RQVQ++GFLVHRP SATD++ P  R V
Sbjct: 138 ACTNAFPDAYIRLVCFDANRQVQISGFLVHRPPSATDYRLPADRQV 183


>gb|AAU93597.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Dunaliella salina]
          Length = 190

 Score =  206 bits (523), Expect = 3e-50
 Identities = 93/153 (60%), Positives = 119/153 (77%)
 Frame = -2

Query: 736 AARTVSNGIKTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFADV 557
           A +  +  ++T QMMVW+P +NK FET S+LPPL+ D+IARQVDY+  NGW PCLEF++ 
Sbjct: 35  APKAQAPAVRTNQMMVWRPVNNKQFETFSYLPPLTADQIARQVDYIVGNGWIPCLEFSEE 94

Query: 556 EFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQNASKTFPNAYIRL 377
            +AYV++ NT R GPV+ NY+DNRYWTM+KLPMFGCTD +QVL E+Q  S+ FP AY RL
Sbjct: 95  SYAYVANTNTARFGPVSNNYYDNRYWTMWKLPMFGCTDPAQVLMEIQKCSRAFPEAYQRL 154

Query: 376 VAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 278
           VAFD K+QVQV  FLV RP ++TD+   D+RSV
Sbjct: 155 VAFDNKKQVQVISFLVQRPKNSTDYCPIDQRSV 187


>sp|Q38692.1|RBS6_ACEPE RecName: Full=Ribulose bisphosphate carboxylase small chain 6,
           chloroplastic; Short=RuBisCO small subunit 6; AltName:
           Full=rbcS4; Flags: Precursor gi|2654375|emb|CAA82266.1|
           ribulosebiphosphate carboxylase, small subunit
           [Acetabularia peniculus]
          Length = 182

 Score =  205 bits (522), Expect = 4e-50
 Identities = 98/165 (59%), Positives = 121/165 (73%)
 Frame = -2

Query: 772 RVPLQKAERNTFAARTVSNGIKTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTR 593
           +V + K   NT AA      IK R+MMVWQP +NK FET S+LPPL+ ++I++QVDY+  
Sbjct: 24  KVSINKGFVNTSAA------IKNREMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILA 77

Query: 592 NGWTPCLEFADVEFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQN 413
           N WTPCLEFA  + AY  ++N   +GPV   Y DNRYWTM+KLPMFGCTD SQVL E+Q 
Sbjct: 78  NAWTPCLEFAASDQAYAGNENCITMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLTEIQA 137

Query: 412 ASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 278
            +K FP+AYIRLV FDA RQVQ++GFLVHRP SATD++ P  R V
Sbjct: 138 CTKAFPDAYIRLVCFDANRQVQISGFLVHRPPSATDYRLPADRQV 182


>sp|P16136.1|RBS3_ACEAT RecName: Full=Ribulose bisphosphate carboxylase small chain 3,
           chloroplastic; Short=RuBisCO small subunit 3; Flags:
           Precursor gi|732553|emb|CAA36110.1| ribulose bisphophate
           carboxylase, small subunit precursor [Acetabularia
           acetabulum]
          Length = 182

 Score =  205 bits (521), Expect = 5e-50
 Identities = 94/144 (65%), Positives = 113/144 (78%)
 Frame = -2

Query: 709 KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFADVEFAYVSSKN 530
           K R MMVWQP +NK FET SFLPPL+ ++I++QVDY+  N WTPCLEFA  + AY  ++N
Sbjct: 39  KNRGMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILINSWTPCLEFAASDQAYAGNEN 98

Query: 529 TNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQNASKTFPNAYIRLVAFDAKRQV 350
             R+GPV   Y DNRYWTM+KLPMFGCTDASQVL E+Q  +K FP+AYIRLV FDA RQV
Sbjct: 99  CIRMGPVASTYQDNRYWTMWKLPMFGCTDASQVLSEIQACTKAFPDAYIRLVCFDANRQV 158

Query: 349 QVAGFLVHRPDSATDFQSPDKRSV 278
           Q++GFLVHRP SATD++ P  R V
Sbjct: 159 QISGFLVHRPPSATDYKLPADRQV 182


>sp|P16132.1|RBS4_ACEPE RecName: Full=Ribulose bisphosphate carboxylase small chain 4,
           chloroplastic; Short=RuBisCO small subunit 4; Flags:
           Precursor gi|732547|emb|CAA36106.1| ribulose
           bisphosphate carboxylase, small subunit precursor
           [Acetabularia peniculus]
          Length = 182

 Score =  204 bits (519), Expect = 8e-50
 Identities = 92/144 (63%), Positives = 113/144 (78%)
 Frame = -2

Query: 709 KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFADVEFAYVSSKN 530
           K R+MMVWQP +NK FET S+LPPL+ ++I++QVDY+  N WTPCLEFA  + AY  ++N
Sbjct: 39  KKREMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNEN 98

Query: 529 TNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQNASKTFPNAYIRLVAFDAKRQV 350
             R+GPV   Y DNRYWTM+KLPMFGCTD SQVL E+Q  +K FP+AYIRLV FDA RQV
Sbjct: 99  CIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQV 158

Query: 349 QVAGFLVHRPDSATDFQSPDKRSV 278
           Q++GFLVHRP SATD++ P  R V
Sbjct: 159 QISGFLVHRPPSATDYRLPADRQV 182


>sp|P26985.2|RBS_BATOE RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|2654261|emb|CAA40538.1| ribulose
           bisphosphate carboxylase small subunit [Batophora
           oerstedii]
          Length = 175

 Score =  204 bits (519), Expect = 8e-50
 Identities = 95/153 (62%), Positives = 117/153 (76%), Gaps = 2/153 (1%)
 Frame = -2

Query: 730 RTVSNGI--KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFADV 557
           R +SNG   K+R MMVW+P +NK+FET S+LPPL+ D+I +QVDY+ RN WTPCLEFA  
Sbjct: 23  RFLSNGTISKSRAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTPCLEFAGS 82

Query: 556 EFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQNASKTFPNAYIRL 377
           + AYV+  NT R+G     Y DNRYWTM+KLPMFGC D SQVL E+   +K FP+AYIRL
Sbjct: 83  DQAYVTHDNTVRMGDCASTYQDNRYWTMWKLPMFGCIDGSQVLTEISACTKAFPDAYIRL 142

Query: 376 VAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 278
           V FDA RQVQ++GFLVHRP+SATD++ P  R V
Sbjct: 143 VCFDANRQVQISGFLVHRPESATDYRLPADRQV 175