BLASTX nr result

ID: Cornus23_contig00001302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00001302
         (465 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006848957.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    99   1e-18
emb|CDP15100.1| unnamed protein product [Coffea canephora]             99   1e-18
ref|XP_012468629.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    99   2e-18
ref|XP_012468653.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    99   2e-18
gb|KHG27068.1| 31 kDa ribonucleoprotein, chloroplastic -like pro...    99   2e-18
gb|KHG05903.1| 31 kDa ribonucleoprotein, chloroplastic -like pro...    99   2e-18
ref|XP_013457715.1| 31 kDa ribonucleoprotein [Medicago truncatul...    97   6e-18
ref|XP_006351431.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    97   6e-18
ref|XP_012850240.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    96   8e-18
ref|XP_013737971.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    96   1e-17
ref|XP_010438971.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    96   1e-17
ref|XP_010438970.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    96   1e-17
ref|XP_010433726.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    96   1e-17
ref|XP_009109240.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    96   1e-17
ref|XP_009137471.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    96   1e-17
ref|XP_013604672.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    96   1e-17
emb|CDY11032.1| BnaA03g46910D [Brassica napus]                         96   1e-17
ref|XP_013656498.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    96   1e-17
ref|XP_006413386.1| hypothetical protein EUTSA_v10025809mg [Eutr...    96   1e-17
ref|XP_007037796.1| 31-kDa RNA binding protein [Theobroma cacao]...    96   1e-17

>ref|XP_006848957.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Amborella
           trichopoda] gi|548852418|gb|ERN10538.1| hypothetical
           protein AMTR_s00166p00060690 [Amborella trichopoda]
          Length = 326

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 50/55 (90%), Positives = 51/55 (92%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRRA 300
           ARVVYDRESGRSRGFGFVTMSTE ELNDAIA LDGQSL GRAIRVN AEERPRR+
Sbjct: 270 ARVVYDRESGRSRGFGFVTMSTETELNDAIAALDGQSLDGRAIRVNVAEERPRRS 324


>emb|CDP15100.1| unnamed protein product [Coffea canephora]
          Length = 313

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 48/54 (88%), Positives = 52/54 (96%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRR 303
           ARVVYDR+SGRSRGFGFVTMS+E+E+NDAIANLDGQSL GRAIRVN AEERPRR
Sbjct: 259 ARVVYDRDSGRSRGFGFVTMSSESEMNDAIANLDGQSLDGRAIRVNVAEERPRR 312


>ref|XP_012468629.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Gossypium
           raimondii] gi|763740586|gb|KJB08085.1| hypothetical
           protein B456_001G063100 [Gossypium raimondii]
           gi|763740587|gb|KJB08086.1| hypothetical protein
           B456_001G063100 [Gossypium raimondii]
          Length = 310

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 49/56 (87%), Positives = 51/56 (91%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRRAF 297
           ARVVYDRE+GRSRGFGFVTMS+E ELNDAIA LDGQSL GRAIRVN AEERPRR F
Sbjct: 254 ARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRVNVAEERPRRGF 309


>ref|XP_012468653.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Gossypium
           raimondii] gi|763738956|gb|KJB06455.1| hypothetical
           protein B456_001G063500 [Gossypium raimondii]
          Length = 321

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 49/56 (87%), Positives = 51/56 (91%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRRAF 297
           ARVVYDRE+GRSRGFGFVTMS+E ELNDAIA LDGQSL GRAIRVN AEERPRR F
Sbjct: 265 ARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRVNVAEERPRRGF 320


>gb|KHG27068.1| 31 kDa ribonucleoprotein, chloroplastic -like protein [Gossypium
           arboreum]
          Length = 321

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 49/56 (87%), Positives = 51/56 (91%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRRAF 297
           ARVVYDRE+GRSRGFGFVTMS+E ELNDAIA LDGQSL GRAIRVN AEERPRR F
Sbjct: 265 ARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRVNVAEERPRRGF 320


>gb|KHG05903.1| 31 kDa ribonucleoprotein, chloroplastic -like protein [Gossypium
           arboreum]
          Length = 310

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 49/56 (87%), Positives = 51/56 (91%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRRAF 297
           ARVVYDRE+GRSRGFGFVTMS+E ELNDAIA LDGQSL GRAIRVN AEERPRR F
Sbjct: 254 ARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRVNVAEERPRRGF 309


>ref|XP_013457715.1| 31 kDa ribonucleoprotein [Medicago truncatula]
           gi|657390180|gb|KEH31746.1| 31 kDa ribonucleoprotein
           [Medicago truncatula]
          Length = 300

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 47/56 (83%), Positives = 51/56 (91%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRRAF 297
           A+VVYDRE+GRSRGFGFVTMS EAE+NDAIA LDGQS  GRAIRVN AEERPRR+F
Sbjct: 245 AQVVYDRETGRSRGFGFVTMSNEAEMNDAIAALDGQSFNGRAIRVNVAEERPRRSF 300


>ref|XP_006351431.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Solanum
           tuberosum]
          Length = 302

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 47/54 (87%), Positives = 52/54 (96%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRR 303
           ARVVYDRESGRSRGFGFVTMS+EAE+++AIANLDGQ+L GR IRVNAAEERPRR
Sbjct: 246 ARVVYDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEERPRR 299


>ref|XP_012850240.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like
           [Erythranthe guttatus] gi|604346373|gb|EYU44836.1|
           hypothetical protein MIMGU_mgv1a011418mg [Erythranthe
           guttata]
          Length = 282

 Score = 96.3 bits (238), Expect = 8e-18
 Identities = 47/56 (83%), Positives = 52/56 (92%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRRAF 297
           ARVV+DRE+GRSRGFGFVTMST+AE+NDAIA LDG+SL GRAIRVN AEERPRR F
Sbjct: 227 ARVVFDRETGRSRGFGFVTMSTQAEVNDAIAALDGESLEGRAIRVNVAEERPRRGF 282


>ref|XP_013737971.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Brassica
           napus] gi|923555303|ref|XP_013737972.1| PREDICTED: 31
           kDa ribonucleoprotein, chloroplastic-like [Brassica
           napus] gi|923555306|ref|XP_013737973.1| PREDICTED: 31
           kDa ribonucleoprotein, chloroplastic-like [Brassica
           napus]
          Length = 305

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 47/56 (83%), Positives = 50/56 (89%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRRAF 297
           ARVVYDRE+GRSRGFGFVTMS E ELNDAIA LDGQ++ GRAIRVN AEERPRR F
Sbjct: 250 ARVVYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 305


>ref|XP_010438971.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Camelina
           sativa]
          Length = 131

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 47/56 (83%), Positives = 50/56 (89%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRRAF 297
           ARVVYDRE+GRSRGFGFVTMS E ELNDAIA LDGQ++ GRAIRVN AEERPRR F
Sbjct: 76  ARVVYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 131


>ref|XP_010438970.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Camelina
           sativa]
          Length = 300

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 47/56 (83%), Positives = 50/56 (89%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRRAF 297
           ARVVYDRE+GRSRGFGFVTMS E ELNDAIA LDGQ++ GRAIRVN AEERPRR F
Sbjct: 245 ARVVYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 300


>ref|XP_010433726.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Camelina
           sativa]
          Length = 298

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 47/56 (83%), Positives = 50/56 (89%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRRAF 297
           ARVVYDRE+GRSRGFGFVTMS E ELNDAIA LDGQ++ GRAIRVN AEERPRR F
Sbjct: 243 ARVVYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 298


>ref|XP_009109240.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Brassica
           rapa]
          Length = 295

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 47/56 (83%), Positives = 50/56 (89%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRRAF 297
           ARVVYDRE+GRSRGFGFVTMS E ELNDAIA LDGQ++ GRAIRVN AEERPRR F
Sbjct: 240 ARVVYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 295


>ref|XP_009137471.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Brassica
           rapa]
          Length = 303

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 47/56 (83%), Positives = 50/56 (89%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRRAF 297
           ARVVYDRE+GRSRGFGFVTMS E ELNDAIA LDGQ++ GRAIRVN AEERPRR F
Sbjct: 248 ARVVYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 303


>ref|XP_013604672.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Brassica
           oleracea var. oleracea] gi|923907273|ref|XP_013723580.1|
           PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like
           [Brassica napus] gi|674924416|emb|CDY08947.1|
           BnaC08g11770D [Brassica napus]
          Length = 290

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 47/56 (83%), Positives = 50/56 (89%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRRAF 297
           ARVVYDRE+GRSRGFGFVTMS E ELNDAIA LDGQ++ GRAIRVN AEERPRR F
Sbjct: 235 ARVVYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 290


>emb|CDY11032.1| BnaA03g46910D [Brassica napus]
          Length = 296

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 47/56 (83%), Positives = 50/56 (89%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRRAF 297
           ARVVYDRE+GRSRGFGFVTMS E ELNDAIA LDGQ++ GRAIRVN AEERPRR F
Sbjct: 241 ARVVYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 296


>ref|XP_013656498.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Brassica
           napus] gi|674908311|emb|CDY24846.1| BnaA08g14640D
           [Brassica napus]
          Length = 295

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 47/56 (83%), Positives = 50/56 (89%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRRAF 297
           ARVVYDRE+GRSRGFGFVTMS E ELNDAIA LDGQ++ GRAIRVN AEERPRR F
Sbjct: 240 ARVVYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 295


>ref|XP_006413386.1| hypothetical protein EUTSA_v10025809mg [Eutrema salsugineum]
           gi|557114556|gb|ESQ54839.1| hypothetical protein
           EUTSA_v10025809mg [Eutrema salsugineum]
          Length = 307

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 47/56 (83%), Positives = 50/56 (89%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRRAF 297
           ARVVYDRE+GRSRGFGFVTMS E ELNDAIA LDGQ++ GRAIRVN AEERPRR F
Sbjct: 252 ARVVYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 307


>ref|XP_007037796.1| 31-kDa RNA binding protein [Theobroma cacao]
           gi|508775041|gb|EOY22297.1| 31-kDa RNA binding protein
           [Theobroma cacao]
          Length = 329

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 48/56 (85%), Positives = 50/56 (89%)
 Frame = -2

Query: 464 ARVVYDRESGRSRGFGFVTMSTEAELNDAIANLDGQSLGGRAIRVNAAEERPRRAF 297
           ARVVYDRE+GRSRGFGFVTMS+E ELNDAIA LDGQ L GRAIRVN AEERPRR F
Sbjct: 274 ARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQILEGRAIRVNVAEERPRRGF 329


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